MD11G1037700.v1.1

DEAD-box ATP-dependent RNA helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0018500
Physical Location & Seq
Reverse (-)
3218561 .. 3223704
5144 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1037700.v1.1.491

Sequence Viewer

Length: 2013 bp
ATGGCGACGCGCTCCGATGACCGTCGGACAAAAAGAAGCGGGTTGGACGCTTTTGGTGGTGGTGCTACGGGAGGCTGTCGTCGCTCGGCACGGTTAGCACAGCATTATGTTGTTGCTGCTGCCGCTCAAGGCTCCTCAAATACTGCCGGCGAGGGCAAGGAGTATAGGAGCCAGCGGAGGAAAATTACCGCTCAAGGCGGCCCGTCTGAAACGCAGGGCCACCACAAGAGGGAAATTACTACTGATGGCACCTCTTACACGCCCGACGACCTCGTCGAGGAGTATAGGCTACGGAGGGGAATCCGTGTTGTAGGCTGGGATGATGCTCCAAACCCCATCAGAACTTTTGATCACACTCGGCTTCCGGAAAATGTTATACAAGAATTTTCAAAAGCTGGATTTGTTAGACCTACACCAATTCAAGCTCAAGTATGGCCAATGGATTTGGAGGACCGTGACCTCATTGGTATTGCTCAACCAGGATCCGGGAAGATGCTAGCGTATCTGATCCCTGCAATTCTCCATGCAAACTCACAGCCAAAACGATCTCGTGGTGGAGATGGCCCAATAGTATTGATTTTAGCTCCAAACACTCAACGCGCTGAACAAATCCATCAAGAGTGTGCTAAATTTGCTGCTGCTTACAACATTAAAGTCTTATTCGGCTTGTCCCTGCTTAAGCCTGAAAATTGTGGTCAGACTTGTGGAGGTGGGATTTTAATCTACACACTTGGTGGCTTGCTTCTTTCGTTAAAGAGAAAACGTACAAACTTGAAAAGCGTCACATACCTTGTGTTGGATGGTGCTGATTGGATGCTATCAGACACGCATGAGCCTCAAATACGAAATCTATTATCTGAGATTCGTGAAGACTGTCAAAAATCATTCTGGGGTAGTAGCTGGCCAGAAGATGTTGATAAACGGGCAAAACTATTCCTTCACAACCCATGCAAAGTTCAAATAATTTCTCCAGATCTGAAAGTGACACCTCCGGTGGACCAAATTGTTTACGTCCTTACTGAGGATCAGAAATATAACAAGTTGGTTGCGCTGCTAGATGGTATATTGGATGGCAGCAGAGTAGTGATATTCATGGATACAAAGAAAGGATGTGAATCACAAGATCACATCGCTCTGCAGCTTTGCACGGACGGTCTGCACGCAGTCTCGTTTCATGAAAACAAAAGTCAAGCGGAAAGGGTCAGTATTGCCTCTGAGTTTCAAGCTGGCAAGATCCCCATAATGATTGCAACAGATGTAGCCGCTCATGTTCTAGATCTGAAGGATGTGAAATATGTTATCAATTACGACTTTCCAGGATCCCTTGATGATTATGTTTACCGCATTGACCGTTTTGGAAGTGCTGCAGCAGAAGGAACAGCATACACATTCTTTACAACTGCTAATGCTGGATGCGCAAAGGGACTTACCATCTTACTCAAGAAAGCTGGACAGAATGTTAGTTCTGAATTGGAACAACTGGGGCGTGATGTAACATATCCAGGAACCTACATACCTCCGTTGCGGCGCTGGGTGCCTAACAACAAAATGACTGGACCTGGTCATTTCTCTCCAATGTATCTGCCTTCTCCGAGGCCTGAAATACATGCCCGTTATGCCCTGGAGGAAATCAGAAAAGTAAAGGGGCTCCAAGCGCATTTTGTGAGAGTGGTGGAGGCATACCAATTCACTACCTTGTGTTTTTTTGCTAGAATGGCTTATCTAACTTTTGAGGCAGCTGACCCCACGACTTATGAAAAGAAGCTTTACCAAGCAATAGTTGTTGAGGCGAGTGACAAAAAGGAAACGATGTTGTTTGGTCTGGTCAATTCTGATGGCCGTTTGTCAAAAATGCATGACACTAGAGAGGGATTCGAATATCCAATCTATAGTATCTGGCTAGAAGACGATGAAGAGGATGAAGATGATGAAGACGATGAGAACAATGAAGACGATGATGACGATGAAGACGATGATGACGATGAAGACAATGAAGAAGACGACGATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko05202 ko05205 map03040 map05202 map05205
Pfam Domains
Protein Families
DEAD Helicase_C

Protein Analysis

671

Amino Acids

74.94

Weight (kDa)

5.09

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 138 - 295 3.6e-22 DEAD/DEAH box helicase
Helicase_C PF00271 344 - 454 3.1e-20 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 272
Acc16I TGCGCA 1 cut(s) 1417
AccB1I GGYRCC 2 cut(s) 248, 1534
AccBSI CCGCTC 3 cut(s) 125, 191, 1265
AccII CGCG 2 cut(s) 10, 600
AccIII TCCGGA 1 cut(s) 364
AciI CCGC 9 cut(s) 39, 123, 175, 189, 198, 1193, 1263, 1342, 1525
AclWI GGATC 7 cut(s) 477, 490, 502, 1032, 1228, 1314, 1327
AcoI YGGCCR 3 cut(s) 434, 902, 1837
AcsI RAATTY 2 cut(s) 383, 629
AcuI CTGAAG 1 cut(s) 1301
AdeI CACNNNGTG 1 cut(s) 734
AfaI GTAC 1 cut(s) 766
AfiI CCNNNNNNNGG 5 cut(s) 229, 277, 485, 796, 1021
AflII CTTAAG 1 cut(s) 677
AgsI TTSAA 5 cut(s) 390, 422, 775, 959, 1223
AjnI CCWGG 5 cut(s) 478, 1315, 1501, 1558, 1620
AluBI AGCT 9 cut(s) 395, 425, 584, 900, 1141, 1226, 1448, 1739, 1765
AluI AGCT 9 cut(s) 395, 425, 584, 900, 1141, 1226, 1448, 1739, 1765
Alw26I GTCTC 1 cut(s) 1171
AlwI GGATC 7 cut(s) 477, 490, 502, 1032, 1228, 1314, 1327
Aor13HI TCCGGA 1 cut(s) 364
AoxI GGCC 7 cut(s) 199, 217, 434, 562, 902, 1595, 1837
ApoI RAATTY 2 cut(s) 383, 629
AspLEI GCGC 6 cut(s) 12, 602, 1051, 1418, 1530, 1657
AspS9I GGNCC 6 cut(s) 200, 217, 451, 563, 997, 1556
AsuC2I CCSGG 1 cut(s) 487
AsuII TTCGAA 1 cut(s) 1875
AsuNHI GCTAGC 1 cut(s) 496
AvaII GGWCC 3 cut(s) 451, 997, 1556
BalI TGGCCA 2 cut(s) 436, 904
BamHI GGATCC 2 cut(s) 482, 1319
BanI GGYRCC 2 cut(s) 248, 1534
BanII GRGCYC 1 cut(s) 1650
BauI CACGAG 1 cut(s) 549
BbsI GAAGAC 7 cut(s) 876, 1911, 1938, 1956, 1974, 1992, 2004
BccI CCATC 9 cut(s) 239, 344, 554, 621, 794, 1052, 1064, 1439, 1829
BceAI ACGGC 1 cut(s) 1824
BciT130I CCWGG 5 cut(s) 480, 1317, 1503, 1560, 1622
BciVI GTATCC 1 cut(s) 1090
BclI TGATCA 1 cut(s) 349
BcnI CCSGG 1 cut(s) 487
BcoDI GTCTC 1 cut(s) 1171
BfaI CTAG 6 cut(s) 497, 1055, 1274, 1710, 1863, 1901
BfmI CTRYAG 3 cut(s) 1136, 1365, 1888
BfoI RGCGCY 1 cut(s) 1531
BfrI CTTAAG 1 cut(s) 677
BfuI GTATCC 1 cut(s) 1090
BglII AGATCT 2 cut(s) 973, 1276
Bme1390I CCNGG 6 cut(s) 480, 487, 1317, 1503, 1560, 1622
Bme18I GGWCC 3 cut(s) 451, 997, 1556
BmgT120I GGNCC 6 cut(s) 200, 217, 451, 563, 997, 1556
BmiI GGNNCC 8 cut(s) 133, 170, 250, 484, 1321, 1507, 1536, 1649
BmrFI CCNGG 6 cut(s) 480, 487, 1317, 1503, 1560, 1622
BmrI ACTGGG 1 cut(s) 1490
BmsI GCATC 4 cut(s) 313, 483, 804, 1403
BmtI GCTAGC 1 cut(s) 500
BmuI ACTGGG 1 cut(s) 1490
BpiI GAAGAC 7 cut(s) 876, 1911, 1938, 1956, 1974, 1992, 2004
BpmI CTGGAG 2 cut(s) 954, 1643
Bpu14I TTCGAA 1 cut(s) 1875
BpuEI CTTGAG 4 cut(s) 111, 177, 411, 1424
BpuMI CCSGG 1 cut(s) 487
BsaBI GATNNNNATC 2 cut(s) 719, 1114
BsaJI CCNNGG 2 cut(s) 1592, 1620
BsaWI WCCGGW 2 cut(s) 364, 991
Bsc4I CCNNNNNNNGG 5 cut(s) 229, 277, 485, 796, 1021
Bse118I RCCGGY 1 cut(s) 146
Bse1I ACTGG 2 cut(s) 1485, 1558
Bse8I GATNNNNATC 2 cut(s) 719, 1114
BseAI TCCGGA 1 cut(s) 364
BseBI CCWGG 5 cut(s) 480, 1317, 1503, 1560, 1622
BseDI CCNNGG 2 cut(s) 1592, 1620
BseGI GGATG 8 cut(s) 325, 805, 819, 1075, 1115, 1291, 1418, 1924
BseJI GATNNNNATC 2 cut(s) 719, 1114
BseLI CCNNNNNNNGG 5 cut(s) 229, 277, 485, 796, 1021
BseMII CTCAG 3 cut(s) 849, 1011, 1206
BseNI ACTGG 2 cut(s) 1485, 1558
BseRI GAGGAG 2 cut(s) 124, 293
BseYI CCCAGC 2 cut(s) 315, 1530
BsgI GTGCAG 1 cut(s) 1142
Bsh1236I CGCG 2 cut(s) 10, 600
BshFI GGCC 7 cut(s) 201, 219, 436, 564, 904, 1597, 1839
BshNI GGYRCC 2 cut(s) 248, 1534
BsiSI CCGG 4 cut(s) 147, 365, 486, 992
BslFI GGGAC 2 cut(s) 655, 1437
BslI CCNNNNNNNGG 5 cut(s) 229, 277, 485, 796, 1021
BsmAI GTCTC 1 cut(s) 1171
BsmFI GGGAC 2 cut(s) 655, 1437
BsnI GGCC 7 cut(s) 201, 219, 436, 564, 904, 1597, 1839
Bsp119I TTCGAA 1 cut(s) 1875
Bsp1286I GDGCHC 1 cut(s) 1650
Bsp13I TCCGGA 1 cut(s) 364
BspACI CCGC 9 cut(s) 39, 123, 175, 189, 198, 1193, 1263, 1342, 1525
BspANI GGCC 7 cut(s) 201, 219, 436, 564, 904, 1597, 1839
BspCNI CTCAG 3 cut(s) 850, 1012, 1207
BspEI TCCGGA 1 cut(s) 364
BspFNI CGCG 2 cut(s) 10, 600
BspHI TCATGA 1 cut(s) 1174
BspLI GGNNCC 8 cut(s) 133, 170, 250, 484, 1321, 1507, 1536, 1649
BspMAI CTGCAG 2 cut(s) 1140, 1369
BspOI GCTAGC 1 cut(s) 500
BspPI GGATC 7 cut(s) 477, 490, 502, 1032, 1228, 1314, 1327
BspT104I TTCGAA 1 cut(s) 1875
BspT107I GGYRCC 2 cut(s) 248, 1534
BspTI CTTAAG 1 cut(s) 677
BsrBI CCGCTC 3 cut(s) 125, 191, 1265
BsrFI RCCGGY 1 cut(s) 146
BsrI ACTGG 2 cut(s) 1485, 1558
BssAI RCCGGY 1 cut(s) 146
BssECI CCNNGG 2 cut(s) 1592, 1620
BssSI CACGAG 1 cut(s) 549
Bst2BI CACGAG 1 cut(s) 549
Bst2UI CCWGG 5 cut(s) 480, 1317, 1503, 1560, 1622
Bst4CI ACNGT 6 cut(s) 23, 93, 455, 875, 1154, 1352
Bst6I CTCTTC 1 cut(s) 1908
BstAFI CTTAAG 1 cut(s) 677
BstBI TTCGAA 1 cut(s) 1875
BstC8I GCNNGC 7 cut(s) 148, 173, 498, 740, 902, 1161, 1228
BstDEI CTNAG 3 cut(s) 858, 1020, 1215
BstENI CCTNNNNNAGG 2 cut(s) 275, 1019
BstF5I GGATG 8 cut(s) 325, 805, 819, 1075, 1115, 1291, 1418, 1924
BstFNI CGCG 2 cut(s) 10, 600
BstH2I RGCGCY 1 cut(s) 1531
BstHHI GCGC 6 cut(s) 12, 602, 1051, 1418, 1530, 1657
BstMAI GTCTC 1 cut(s) 1171
BstMWI GCNNNNNNNGC 9 cut(s) 81, 95, 122, 632, 1415, 1534, 1616, 1654, 1715
BstNI CCWGG 5 cut(s) 480, 1317, 1503, 1560, 1622
BstNSI RCATGY 1 cut(s) 1610
BstSCI CCNGG 6 cut(s) 478, 485, 1315, 1501, 1558, 1620
BstSFI CTRYAG 3 cut(s) 1136, 1365, 1888
BstUI CGCG 2 cut(s) 10, 600
BstV2I GAAGAC 7 cut(s) 876, 1911, 1938, 1956, 1974, 1992, 2004
BstX2I RGATCY 5 cut(s) 482, 973, 1233, 1276, 1319
BstYI RGATCY 5 cut(s) 482, 973, 1233, 1276, 1319
BsuI GTATCC 1 cut(s) 1090
BsuRI GGCC 7 cut(s) 201, 219, 436, 564, 904, 1597, 1839
BtgZI GCGATG 1 cut(s) 1114
BtsCI GGATG 8 cut(s) 325, 805, 819, 1075, 1115, 1291, 1418, 1924
Cac8I GCNNGC 7 cut(s) 148, 173, 498, 740, 902, 1161, 1228
CciI TCATGA 1 cut(s) 1174
CfoI GCGC 6 cut(s) 12, 602, 1051, 1418, 1530, 1657
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 6 cut(s) 200, 217, 451, 563, 997, 1556
CseI GACGC 3 cut(s) 16, 56, 769
CsiI ACCWGGT 1 cut(s) 1558
Csp6I GTAC 1 cut(s) 765
CviAII CATG 8 cut(s) 524, 830, 948, 1093, 1175, 1268, 1607, 1856
CviQI GTAC 1 cut(s) 765
DdeI CTNAG 3 cut(s) 858, 1020, 1215
DraIII CACNNNGTG 1 cut(s) 734
DrdI GACNNNNNNGTC 1 cut(s) 272
DseDI GACNNNNNNGTC 1 cut(s) 272
EaeI YGGCCR 3 cut(s) 434, 902, 1837
Eam1104I CTCTTC 1 cut(s) 1908
EarI CTCTTC 1 cut(s) 1908
Eco147I AGGCCT 1 cut(s) 1597
Eco24I GRGCYC 1 cut(s) 1650
Eco47I GGWCC 3 cut(s) 451, 997, 1556
Eco57I CTGAAG 1 cut(s) 1301
EcoNI CCTNNNNNAGG 2 cut(s) 275, 1019
EcoRII CCWGG 5 cut(s) 478, 1315, 1501, 1558, 1620
EcoT22I ATGCAT 1 cut(s) 1857
EcoT38I GRGCYC 1 cut(s) 1650
FaeI CATG 8 cut(s) 527, 833, 951, 1096, 1178, 1271, 1610, 1859
FaqI GGGAC 2 cut(s) 655, 1437
FatI CATG 8 cut(s) 523, 829, 947, 1092, 1174, 1267, 1606, 1855
FauI CCCGC 1 cut(s) 32
FbaI TGATCA 1 cut(s) 349
FokI GGATG 8 cut(s) 332, 812, 826, 1082, 1122, 1298, 1425, 1931
FriOI GRGCYC 1 cut(s) 1650
FspBI CTAG 6 cut(s) 497, 1055, 1274, 1710, 1863, 1901
FspI TGCGCA 1 cut(s) 1417
GlaI GCGC 6 cut(s) 11, 601, 1050, 1417, 1529, 1656
GsaI CCCAGC 2 cut(s) 319, 1534
GsuI CTGGAG 2 cut(s) 954, 1643
HaeII RGCGCY 1 cut(s) 1531
HaeIII GGCC 7 cut(s) 201, 219, 436, 564, 904, 1597, 1839
HapII CCGG 4 cut(s) 147, 365, 486, 992
HgaI GACGC 3 cut(s) 16, 56, 769
HhaI GCGC 6 cut(s) 12, 602, 1051, 1418, 1530, 1657
Hin1II CATG 8 cut(s) 527, 833, 951, 1096, 1178, 1271, 1610, 1859
Hin6I GCGC 6 cut(s) 10, 600, 1049, 1416, 1528, 1655
HinP1I GCGC 6 cut(s) 10, 600, 1049, 1416, 1528, 1655
HindIII AAGCTT 1 cut(s) 1763
HinfI GANTC 4 cut(s) 300, 862, 1115, 1872
HpaII CCGG 4 cut(s) 147, 365, 486, 992
Hpy166II GTNNAC 3 cut(s) 997, 1009, 1339
Hpy188III TCNNGA 7 cut(s) 365, 617, 866, 971, 1175, 1274, 1441
Hpy8I GTNNAC 3 cut(s) 997, 1009, 1339
Hpy99I CGWCG 6 cut(s) 10, 27, 84, 269, 278, 2006
HpyAV CCTTC 4 cut(s) 947, 1276, 1367, 1596
HpyCH4III ACNGT 6 cut(s) 23, 93, 455, 875, 1154, 1352
HpyCH4IV ACGT 2 cut(s) 763, 1011
HpyCH4V TGCA 9 cut(s) 515, 527, 951, 1138, 1146, 1159, 1250, 1367, 1855
HpyF10VI GCNNNNNNNGC 9 cut(s) 81, 95, 122, 632, 1415, 1534, 1616, 1654, 1715
HpyF3I CTNAG 3 cut(s) 858, 1020, 1215
HpySE526I ACGT 2 cut(s) 763, 1011
Hsp92II CATG 8 cut(s) 527, 833, 951, 1096, 1178, 1271, 1610, 1859
HspAI GCGC 6 cut(s) 10, 600, 1049, 1416, 1528, 1655
Kpn2I TCCGGA 1 cut(s) 364
KroI GCCGGC 1 cut(s) 146
KroNI GCCGGC 1 cut(s) 148
Ksp22I TGATCA 1 cut(s) 349
LmnI GCTCC 6 cut(s) 17, 137, 168, 331, 589, 1653
LweI GCATC 4 cut(s) 313, 483, 804, 1403
MabI ACCWGGT 1 cut(s) 1558
MaeI CTAG 6 cut(s) 497, 1055, 1274, 1710, 1863, 1901
MaeII ACGT 2 cut(s) 763, 1011
MaeIII GTNAC 5 cut(s) 455, 781, 982, 1492, 1793
MbiI CCGCTC 3 cut(s) 125, 191, 1265
MflI RGATCY 5 cut(s) 482, 973, 1233, 1276, 1319
MhlI GDGCHC 1 cut(s) 1650
MlsI TGGCCA 2 cut(s) 436, 904
MluNI TGGCCA 2 cut(s) 436, 904
MmeI TCCRAC 3 cut(s) 5, 24, 777
Mox20I TGGCCA 2 cut(s) 436, 904
Mph1103I ATGCAT 1 cut(s) 1857
MroI TCCGGA 1 cut(s) 364
MroNI GCCGGC 1 cut(s) 146
MscI TGGCCA 2 cut(s) 436, 904
MseI TTAA 4 cut(s) 651, 678, 719, 752
Msp20I TGGCCA 2 cut(s) 436, 904
MspA1I CMGCKG 2 cut(s) 175, 1739
MspCI CTTAAG 1 cut(s) 677
MspI CCGG 4 cut(s) 147, 365, 486, 992
MspR9I CCNGG 6 cut(s) 480, 487, 1317, 1503, 1560, 1622
MvaI CCWGG 5 cut(s) 480, 1317, 1503, 1560, 1622
MvnI CGCG 2 cut(s) 10, 600
MwoI GCNNNNNNNGC 9 cut(s) 81, 95, 122, 632, 1415, 1534, 1616, 1654, 1715
NaeI GCCGGC 1 cut(s) 148
NciI CCSGG 1 cut(s) 487
NgoMIV GCCGGC 1 cut(s) 146
NheI GCTAGC 1 cut(s) 496
NlaIII CATG 8 cut(s) 527, 833, 951, 1096, 1178, 1271, 1610, 1859
NlaIV GGNNCC 8 cut(s) 133, 170, 250, 484, 1321, 1507, 1536, 1649
NmeAIII GCCGAG 2 cut(s) 65, 337
NmuCI GTSAC 4 cut(s) 455, 781, 982, 1793
NsbI TGCGCA 1 cut(s) 1417
NsiI ATGCAT 1 cut(s) 1857
NspI RCATGY 1 cut(s) 1610
NspV TTCGAA 1 cut(s) 1875
PagI TCATGA 1 cut(s) 1174
PceI AGGCCT 1 cut(s) 1597
PcsI WCGNNNNNNNCGW 4 cut(s) 273, 1959, 1968, 1977
PdiI GCCGGC 1 cut(s) 148
PfeI GAWTC 4 cut(s) 300, 862, 1115, 1872
PflFI GACNNNGTC 2 cut(s) 272, 1560
PfoI TCCNGGA 3 cut(s) 485, 1315, 1501
Psp6I CCWGG 5 cut(s) 478, 1315, 1501, 1558, 1620
PspFI CCCAGC 2 cut(s) 315, 1530
PspGI CCWGG 5 cut(s) 478, 1315, 1501, 1558, 1620
PspN4I GGNNCC 8 cut(s) 133, 170, 250, 484, 1321, 1507, 1536, 1649
PspPI GGNCC 6 cut(s) 200, 217, 451, 563, 997, 1556
PstI CTGCAG 2 cut(s) 1140, 1369
PsuI RGATCY 5 cut(s) 482, 973, 1233, 1276, 1319
PsyI GACNNNGTC 2 cut(s) 272, 1560
PvuII CAGCTG 1 cut(s) 1739
RsaI GTAC 1 cut(s) 766
RsaNI GTAC 1 cut(s) 765
SaqAI TTAA 4 cut(s) 651, 678, 719, 752
Sau96I GGNCC 6 cut(s) 200, 217, 451, 563, 997, 1556
ScrFI CCNGG 6 cut(s) 480, 487, 1317, 1503, 1560, 1622
SduI GDGCHC 1 cut(s) 1650
SexAI ACCWGGT 1 cut(s) 1558
SfaNI GCATC 4 cut(s) 313, 483, 804, 1403
SfcI CTRYAG 3 cut(s) 1136, 1365, 1888
SfuI TTCGAA 1 cut(s) 1875
SinI GGWCC 3 cut(s) 451, 997, 1556
SmlI CTYRAG 5 cut(s) 126, 192, 426, 677, 1439
SmoI CTYRAG 5 cut(s) 126, 192, 426, 677, 1439
SseBI AGGCCT 1 cut(s) 1597
SsiI CCGC 9 cut(s) 39, 123, 175, 189, 198, 1193, 1263, 1342, 1525
SspMI CTAG 6 cut(s) 497, 1055, 1274, 1710, 1863, 1901
StuI AGGCCT 1 cut(s) 1597
StyD4I CCNGG 6 cut(s) 478, 485, 1315, 1501, 1558, 1620
TaaI ACNGT 6 cut(s) 23, 93, 455, 875, 1154, 1352
TaiI ACGT 2 cut(s) 766, 1014
TaqI TCGA 2 cut(s) 276, 1875
TauI GCSGC 4 cut(s) 125, 201, 1265, 1528
TfiI GAWTC 4 cut(s) 300, 862, 1115, 1872
Tru1I TTAA 4 cut(s) 651, 678, 719, 752
Tru9I TTAA 4 cut(s) 651, 678, 719, 752
TseFI GTSAC 4 cut(s) 455, 781, 982, 1793
Tsp45I GTSAC 4 cut(s) 455, 781, 982, 1793
TspGWI ACGGA 4 cut(s) 293, 307, 1163, 1509
Tth111I GACNNNGTC 2 cut(s) 272, 1560
Vha464I CTTAAG 1 cut(s) 677
VpaK11BI GGWCC 3 cut(s) 451, 997, 1556
XagI CCTNNNNNAGG 2 cut(s) 275, 1019
XapI RAATTY 2 cut(s) 383, 629
XbaI TCTAGA 1 cut(s) 1273
XceI RCATGY 1 cut(s) 1610
XspI CTAG 6 cut(s) 497, 1055, 1274, 1710, 1863, 1901
Zsp2I ATGCAT 1 cut(s) 1857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.