MD03G1037300.v1.1
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Reverse (-)
2957303 .. 2959572
2270 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1037300.v1.1.491

Sequence Viewer

Length: 1668 bp
ATGTTGTCGCATTGTTTCCTTAACTTATATGCTACATTAGATATACGAAACAAGTCTCAACTGAACGGCCTCAATGTACCTGATGCAAGTTTGGTTCCAGTGACATGTACTCAAGATGTTCTTGAGTTGATGAAAATCGGCCAAAAGAATCGCGCTGTTGGCGCTACAGCTCTAAATGAGCGCAGCAGCCGGTCTCATAGTGTTTTAACAATTCATGTACTTGGAAAGGAGTTGGCTACCGGATCAATTCTAAGGGGTTGCCTTCATCTTGTGGATTTGGCCGGGAGTGAGAGAGTTGATAAATCCGAGGCTGTTGGCGAGAGGCTAAAGGAAGCCCAACACATAAATCGATCGCTTTCTGCACTTGGAGATGTCATATCTGCTCTTGCACAAAAGAGTACACATGTTCCTTACAGAAATAGCAAACTTACTCAAGTCTTGCAAGACTCTTTAGGTGGTCACGCAAAAACCATGATGTTTGTGCATATAAATCCTGAACTTAATGCGCTCGGGGAGACGATCAGTACCCTCAAGTTTGCTGAGAGGGTTGCATCCATCGAGCTTGGGGCAGCTCAATCTCATAAAGAAACGGGTGAAATCCGCGAACTTAAAGACGAGATATCAAATCTTAAACTGGCATTGGAGAGAAAGGAAGCTGAGCTAGAGCAAATTAAAGGCAGCACACGAAACGCCATAGATTCCCAAAAGTCAAGAGCTGTTTCACCTTTCCGTGTTCCGAGAAATGGTACTGGAAACGGTTCAAAGCCTGAAAACTGTCAGCGAGCCTTGGACGATACTAAGATTTCTGAGGCAAGAAGTTGCTCTACGGGCAAGCAAAGGAGGTTGAGGTTTCCCTCTGCATTCGCCGACAAGGAGATTTCAGCGAAGATGTCATTACCAGTTGAAGACAGATTAGTCATCCCTGGACATCTCAGAACACCATCACCTCCAGTTAGGAGATCAATATCTACTGATAGAGGAGCCTTCATCAAAAGTAGGAATAAGGCTGACACAACCGAAAACCATCCAATTGCGAAAGTACCATTTCCAGCTAGAGTACCTGTCAATAAATCCCTCGCAACTATGCCGGTGTTCCCATCAACTGAGAACAACTCGAGGGTATGCACCAGTTCGCGAGAACCAACTAAGCACGAGGACATTTTCGGTGCATTAAACAGCCTCCAGAAGGCCAACTCCAAGAAAGTTTACCAAGAACCTGAAGACGAGCAGTTTAAGCTAGCTCTTAATGTAAGGCAAGGAGGTATTAGAAAAATCAAGAATGAGAGTAAGGCAGCTAAGATCAAGCAGAACAGGATACCAGCTAGAGTTCAAAATTCTGATGCAGTGACAACAATGTTTCCTAACTCAGATGCTGGTGAAAAGATTGAAGAGGCTCGAAAGAGTGACTTCTCCGAGCCGGAAAATGAGGATATCCTCATTGCTTCACCCAAGCATAATTCCTTGATGGCGAAAAAGCTTCGGCAACCCATGCCAAGGAACTATATAAATCTTGAACCACGAGGACTAGTGCAAGCAGAAGAACCTTTATTGGCTGGAAAGTCCGAAAACAAGCTTCTAAATGGCAATGGCGTAACACGAAATCAAAAGGAAGGCGGCAACATGGCCATGCCTGAAATCAGAAGAAGCCGATCCACACGGAATTTTTAG

Protein Analysis

556

Amino Acids

61.23

Weight (kDa)

9.7

Isoelectric Point (pI)

52.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 12 - 186 6.6e-63 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 914
AccII CGCG 3 cut(s) 153, 603, 1135
AciI CCGC 2 cut(s) 601, 1614
AclWI GGATC 2 cut(s) 250, 1644
AcoI YGGCCR 3 cut(s) 139, 279, 1623
AcsI RAATTY 2 cut(s) 1333, 1660
AcuI CTGAAG 1 cut(s) 1239
AfaI GTAC 8 cut(s) 78, 109, 219, 400, 526, 748, 1041, 1059
AfiI CCNNNNNNNGG 3 cut(s) 743, 1186, 1494
AflIII ACRYGT 2 cut(s) 104, 403
AgsI TTSAA 5 cut(s) 762, 905, 1331, 1388, 1514
AhlI ACTAGT 1 cut(s) 1525
AjnI CCWGG 1 cut(s) 922
Alw26I GTCTC 3 cut(s) 60, 198, 509
AlwI GGATC 2 cut(s) 250, 1644
AlwNI CAGNNNCTG 1 cut(s) 1373
Ama87I CYCGRG 2 cut(s) 509, 1114
AoxI GGCC 5 cut(s) 67, 139, 279, 1188, 1623
ApeKI GCWGC 5 cut(s) 183, 186, 569, 678, 1292
ApoI RAATTY 2 cut(s) 1333, 1660
Asp700I GAANNNNTTC 1 cut(s) 757
AspLEI GCGC 4 cut(s) 155, 164, 183, 508
AsuC2I CCSGG 1 cut(s) 283
AsuHPI GGTGA 5 cut(s) 605, 714, 936, 1388, 1437
AsuNHI GCTAGC 1 cut(s) 1237
AvaI CYCGRG 2 cut(s) 509, 1114
BalI TGGCCA 1 cut(s) 1625
BarI GAAGNNNNNNTAC 2 cut(s) 808, 840
BauI CACGAG 2 cut(s) 1151, 1518
BbsI GAAGAC 2 cut(s) 912, 1227
BbvI GCAGC 5 cut(s) 195, 198, 581, 690, 1304
BccI CCATC 5 cut(s) 563, 949, 1032, 1105, 1459
BceAI ACGGC 1 cut(s) 82
BciT130I CCWGG 1 cut(s) 924
BciVI GTATCC 1 cut(s) 1308
BcnI CCSGG 1 cut(s) 283
BcoDI GTCTC 3 cut(s) 60, 198, 509
BcuI ACTAGT 1 cut(s) 1525
BfaI CTAG 5 cut(s) 662, 1053, 1238, 1323, 1526
BfmI CTRYAG 1 cut(s) 165
BfoI RGCGCY 1 cut(s) 165
BfuI GTATCC 1 cut(s) 1308
BisI GCNGC 6 cut(s) 184, 187, 570, 679, 1293, 1615
BlpI GCTNAGC 1 cut(s) 657
BlsI GCNGC 6 cut(s) 185, 188, 571, 680, 1294, 1616
Bme1390I CCNGG 2 cut(s) 283, 924
BmeT110I CYCGRG 2 cut(s) 509, 1114
BmiI GGNNCC 2 cut(s) 96, 982
BmrFI CCNGG 2 cut(s) 283, 924
BmsI GCATC 4 cut(s) 73, 560, 1330, 1360
BmtI GCTAGC 1 cut(s) 1241
BpiI GAAGAC 2 cut(s) 912, 1227
BplI GAGNNNNNCTC 2 cut(s) 1097, 1129
BpmI CTGGAG 2 cut(s) 933, 1166
Bpu1102I GCTNAGC 1 cut(s) 657
BpuEI CTTGAG 4 cut(s) 96, 143, 417, 515
BpuMI CCSGG 1 cut(s) 283
Bsa29I ATCGAT 1 cut(s) 349
BsaBI GATNNNNATC 2 cut(s) 134, 964
BsaI GGTCTC 1 cut(s) 198
BsaJI CCNNGG 4 cut(s) 306, 786, 922, 1493
BsaWI WCCGGW 1 cut(s) 239
Bsc4I CCNNNNNNNGG 3 cut(s) 743, 1186, 1494
Bse118I RCCGGY 2 cut(s) 189, 1087
Bse1I ACTGG 6 cut(s) 98, 639, 754, 899, 950, 1128
Bse3DI GCAATG 2 cut(s) 1437, 1591
Bse8I GATNNNNATC 2 cut(s) 134, 964
BseBI CCWGG 1 cut(s) 924
BseCI ATCGAT 1 cut(s) 349
BseDI CCNNGG 4 cut(s) 306, 786, 922, 1493
BseGI GGATG 3 cut(s) 551, 918, 1024
BseJI GATNNNNATC 2 cut(s) 134, 964
BseLI CCNNNNNNNGG 3 cut(s) 743, 1186, 1494
BseMI GCAATG 2 cut(s) 1437, 1591
BseMII CTCAG 6 cut(s) 531, 648, 798, 946, 1095, 1380
BseNI ACTGG 6 cut(s) 98, 639, 754, 899, 950, 1128
BseRI GAGGAG 1 cut(s) 993
BseXI GCAGC 5 cut(s) 195, 198, 581, 690, 1304
BsgI GTGCAG 1 cut(s) 345
Bsh1236I CGCG 3 cut(s) 153, 603, 1135
Bsh1285I CGRYCG 1 cut(s) 353
BshFI GGCC 5 cut(s) 69, 141, 281, 1190, 1625
BshVI ATCGAT 1 cut(s) 349
BsiEI CGRYCG 1 cut(s) 353
BsiHKCI CYCGRG 2 cut(s) 509, 1114
BsiSI CCGG 5 cut(s) 190, 240, 282, 1088, 1418
BslI CCNNNNNNNGG 3 cut(s) 743, 1186, 1494
BsmAI GTCTC 3 cut(s) 60, 198, 509
BsmBI CGTCTC 1 cut(s) 509
BsmI GAATGC 1 cut(s) 860
BsnI GGCC 5 cut(s) 69, 141, 281, 1190, 1625
Bso31I GGTCTC 1 cut(s) 198
BsoBI CYCGRG 2 cut(s) 509, 1114
Bsp143I GATC 6 cut(s) 242, 350, 519, 959, 1299, 1649
Bsp1720I GCTNAGC 1 cut(s) 657
Bsp68I TCGCGA 1 cut(s) 1135
BspACI CCGC 2 cut(s) 601, 1614
BspANI GGCC 5 cut(s) 69, 141, 281, 1190, 1625
BspCNI CTCAG 6 cut(s) 532, 649, 799, 945, 1096, 1379
BspDI ATCGAT 1 cut(s) 349
BspFNI CGCG 3 cut(s) 153, 603, 1135
BspLI GGNNCC 2 cut(s) 96, 982
BspOI GCTAGC 1 cut(s) 1241
BspPI GGATC 2 cut(s) 250, 1644
BspTNI GGTCTC 1 cut(s) 198
BsrDI GCAATG 2 cut(s) 1437, 1591
BsrFI RCCGGY 2 cut(s) 189, 1087
BsrI ACTGG 6 cut(s) 98, 639, 754, 899, 950, 1128
BssAI RCCGGY 2 cut(s) 189, 1087
BssECI CCNNGG 4 cut(s) 306, 786, 922, 1493
BssMI GATC 6 cut(s) 242, 350, 519, 959, 1299, 1649
BssSI CACGAG 2 cut(s) 1151, 1518
BssT1I CCWWGG 2 cut(s) 786, 1493
Bst2BI CACGAG 2 cut(s) 1151, 1518
Bst2UI CCWGG 1 cut(s) 924
Bst4CI ACNGT 2 cut(s) 758, 776
Bst6I CTCTTC 1 cut(s) 1383
BstAPI GCANNNNNTGC 1 cut(s) 1489
BstC8I GCNNGC 4 cut(s) 783, 833, 1239, 1533
BstENI CCTNNNNNAGG 1 cut(s) 1184
BstF5I GGATG 3 cut(s) 551, 918, 1024
BstFNI CGCG 3 cut(s) 153, 603, 1135
BstH2I RGCGCY 1 cut(s) 165
BstHHI GCGC 4 cut(s) 155, 164, 183, 508
BstKTI GATC 6 cut(s) 245, 353, 522, 962, 1302, 1652
BstMAI GTCTC 3 cut(s) 60, 198, 509
BstMBI GATC 6 cut(s) 242, 350, 519, 959, 1299, 1649
BstMCI CGRYCG 1 cut(s) 353
BstMWI GCNNNNNNNGC 5 cut(s) 159, 161, 828, 1234, 1489
BstNI CCWGG 1 cut(s) 924
BstNSI RCATGY 2 cut(s) 108, 407
BstSCI CCNGG 2 cut(s) 281, 922
BstSFI CTRYAG 1 cut(s) 165
BstUI CGCG 3 cut(s) 153, 603, 1135
BstV1I GCAGC 5 cut(s) 195, 198, 581, 690, 1304
BstV2I GAAGAC 2 cut(s) 912, 1227
Bsu15I ATCGAT 1 cut(s) 349
BsuI GTATCC 1 cut(s) 1308
BsuRI GGCC 5 cut(s) 69, 141, 281, 1190, 1625
BsuTUI ATCGAT 1 cut(s) 349
BtsCI GGATG 3 cut(s) 551, 918, 1024
BtsI GCAGTG 1 cut(s) 1350
BtsIMutI CAGTG 2 cut(s) 105, 1350
BtuMI TCGCGA 1 cut(s) 1135
Cac8I GCNNGC 4 cut(s) 783, 833, 1239, 1533
CaiI CAGNNNCTG 1 cut(s) 1373
CfoI GCGC 4 cut(s) 155, 164, 183, 508
Cfr10I RCCGGY 2 cut(s) 189, 1087
ClaI ATCGAT 1 cut(s) 349
Csp6I GTAC 8 cut(s) 77, 108, 218, 399, 525, 747, 1040, 1058
CviAII CATG 7 cut(s) 105, 215, 404, 472, 1489, 1621, 1627
CviQI GTAC 8 cut(s) 77, 108, 218, 399, 525, 747, 1040, 1058
DpnI GATC 6 cut(s) 244, 352, 521, 961, 1301, 1651
DpnII GATC 6 cut(s) 242, 350, 519, 959, 1299, 1649
DrdI GACNNNNNNGTC 1 cut(s) 914
DseDI GACNNNNNNGTC 1 cut(s) 914
EaeI YGGCCR 3 cut(s) 139, 279, 1623
Eam1104I CTCTTC 1 cut(s) 1383
EarI CTCTTC 1 cut(s) 1383
Eco130I CCWWGG 2 cut(s) 786, 1493
Eco31I GGTCTC 1 cut(s) 198
Eco32I GATATC 2 cut(s) 621, 1432
Eco57I CTGAAG 1 cut(s) 1239
Eco88I CYCGRG 2 cut(s) 509, 1114
EcoNI CCTNNNNNAGG 1 cut(s) 1184
EcoRII CCWGG 1 cut(s) 922
EcoRV GATATC 2 cut(s) 621, 1432
EcoT14I CCWWGG 2 cut(s) 786, 1493
ErhI CCWWGG 2 cut(s) 786, 1493
Esp3I CGTCTC 1 cut(s) 509
FaeI CATG 7 cut(s) 108, 218, 407, 475, 1492, 1624, 1630
FalI AAGNNNNNCTT 4 cut(s) 105, 137, 1391, 1423
FatI CATG 7 cut(s) 104, 214, 403, 471, 1488, 1620, 1626
Fnu4HI GCNGC 6 cut(s) 184, 187, 570, 679, 1293, 1615
FokI GGATG 3 cut(s) 538, 905, 1011
Fsp4HI GCNGC 6 cut(s) 184, 187, 570, 679, 1293, 1615
FspBI CTAG 5 cut(s) 662, 1053, 1238, 1323, 1526
GlaI GCGC 4 cut(s) 154, 163, 182, 507
GluI GCNGC 6 cut(s) 184, 187, 570, 679, 1293, 1615
GsuI CTGGAG 2 cut(s) 933, 1166
HaeII RGCGCY 1 cut(s) 165
HaeIII GGCC 5 cut(s) 69, 141, 281, 1190, 1625
HapII CCGG 5 cut(s) 190, 240, 282, 1088, 1418
HhaI GCGC 4 cut(s) 155, 164, 183, 508
Hin1II CATG 7 cut(s) 108, 218, 407, 475, 1492, 1624, 1630
Hin6I GCGC 4 cut(s) 153, 162, 181, 506
HinP1I GCGC 4 cut(s) 153, 162, 181, 506
HindIII AAGCTT 2 cut(s) 1475, 1571
HinfI GANTC 3 cut(s) 148, 446, 698
HpaII CCGG 5 cut(s) 190, 240, 282, 1088, 1418
HphI GGTGA 5 cut(s) 605, 714, 936, 1388, 1437
Hpy166II GTNNAC 2 cut(s) 401, 1207
Hpy188I TCNGA 9 cut(s) 307, 738, 808, 935, 1339, 1369, 1414, 1564, 1640
Hpy188III TCNNGA 8 cut(s) 113, 122, 494, 711, 1134, 1183, 1276, 1511
Hpy8I GTNNAC 2 cut(s) 401, 1207
HpyAV CCTTC 4 cut(s) 272, 994, 1180, 1604
HpyCH4III ACNGT 2 cut(s) 758, 776
HpyF10VI GCNNNNNNNGC 5 cut(s) 159, 161, 828, 1234, 1489
Hsp92II CATG 7 cut(s) 108, 218, 407, 475, 1492, 1624, 1630
HspAI GCGC 4 cut(s) 153, 162, 181, 506
Kzo9I GATC 6 cut(s) 242, 350, 519, 959, 1299, 1649
LmnI GCTCC 1 cut(s) 980
Lsp1109I GCAGC 5 cut(s) 195, 198, 581, 690, 1304
LweI GCATC 4 cut(s) 73, 560, 1330, 1360
MaeI CTAG 5 cut(s) 662, 1053, 1238, 1323, 1526
MaeIII GTNAC 5 cut(s) 100, 458, 1345, 1403, 1591
MalI GATC 6 cut(s) 244, 352, 521, 961, 1301, 1651
MboI GATC 6 cut(s) 242, 350, 519, 959, 1299, 1649
MboII GAAGA 6 cut(s) 898, 917, 1232, 1400, 1550, 1653
MfeI CAATTG 1 cut(s) 1029
MlsI TGGCCA 1 cut(s) 1625
MluCI AATT 7 cut(s) 210, 246, 669, 1029, 1333, 1456, 1660
MluNI TGGCCA 1 cut(s) 1625
MlyI GAGTC 1 cut(s) 440
Mox20I TGGCCA 1 cut(s) 1625
MroXI GAANNNNTTC 1 cut(s) 757
MscI TGGCCA 1 cut(s) 1625
MseI TTAA 9 cut(s) 21, 206, 501, 609, 630, 672, 1172, 1233, 1245
MslI CAYNNNNRTG 1 cut(s) 1625
Msp20I TGGCCA 1 cut(s) 1625
MspI CCGG 5 cut(s) 190, 240, 282, 1088, 1418
MspR9I CCNGG 2 cut(s) 283, 924
MunI CAATTG 1 cut(s) 1029
Mva1269I GAATGC 1 cut(s) 860
MvaI CCWGG 1 cut(s) 924
MvnI CGCG 3 cut(s) 153, 603, 1135
MwoI GCNNNNNNNGC 5 cut(s) 159, 161, 828, 1234, 1489
NciI CCSGG 1 cut(s) 283
NdeII GATC 6 cut(s) 242, 350, 519, 959, 1299, 1649
NheI GCTAGC 1 cut(s) 1237
NlaIII CATG 7 cut(s) 108, 218, 407, 475, 1492, 1624, 1630
NlaIV GGNNCC 2 cut(s) 96, 982
NmuCI GTSAC 4 cut(s) 100, 458, 1345, 1403
NruI TCGCGA 1 cut(s) 1135
NspI RCATGY 2 cut(s) 108, 407
PaeR7I CTCGAG 1 cut(s) 1114
PciI ACATGT 2 cut(s) 104, 403
PctI GAATGC 1 cut(s) 860
PdmI GAANNNNTTC 1 cut(s) 757
PfeI GAWTC 2 cut(s) 148, 698
PkrI GCNGC 6 cut(s) 185, 188, 571, 680, 1294, 1616
Ple19I CGATCG 1 cut(s) 353
PleI GAGTC 1 cut(s) 440
PpsI GAGTC 1 cut(s) 440
PscI ACATGT 2 cut(s) 104, 403
Psp6I CCWGG 1 cut(s) 922
PspGI CCWGG 1 cut(s) 922
PspN4I GGNNCC 2 cut(s) 96, 982
PspXI VCTCGAGB 1 cut(s) 1114
PstNI CAGNNNCTG 1 cut(s) 1373
PvuI CGATCG 1 cut(s) 353
RruI TCGCGA 1 cut(s) 1135
RsaI GTAC 8 cut(s) 78, 109, 219, 400, 526, 748, 1041, 1059
RsaNI GTAC 8 cut(s) 77, 108, 218, 399, 525, 747, 1040, 1058
RseI CAYNNNNRTG 1 cut(s) 1625
SaqAI TTAA 9 cut(s) 21, 206, 501, 609, 630, 672, 1172, 1233, 1245
SatI GCNGC 6 cut(s) 184, 187, 570, 679, 1293, 1615
Sau3AI GATC 6 cut(s) 242, 350, 519, 959, 1299, 1649
SchI GAGTC 1 cut(s) 440
ScrFI CCNGG 2 cut(s) 283, 924
SfaNI GCATC 4 cut(s) 73, 560, 1330, 1360
SfcI CTRYAG 1 cut(s) 165
Sfr274I CTCGAG 1 cut(s) 1114
SlaI CTCGAG 1 cut(s) 1114
SmiMI CAYNNNNRTG 1 cut(s) 1625
SmlI CTYRAG 5 cut(s) 111, 122, 432, 530, 1114
SmoI CTYRAG 5 cut(s) 111, 122, 432, 530, 1114
SpeI ACTAGT 1 cut(s) 1525
Sse9I AATT 7 cut(s) 210, 246, 669, 1029, 1333, 1456, 1660
SsiI CCGC 2 cut(s) 601, 1614
SspMI CTAG 5 cut(s) 662, 1053, 1238, 1323, 1526
StyD4I CCNGG 2 cut(s) 281, 922
StyI CCWWGG 2 cut(s) 786, 1493
TaaI ACNGT 2 cut(s) 758, 776
TaqI TCGA 4 cut(s) 349, 558, 1115, 1396
TasI AATT 7 cut(s) 210, 246, 669, 1029, 1333, 1456, 1660
TatI WGTACW 3 cut(s) 107, 217, 398
TauI GCSGC 1 cut(s) 1617
TfiI GAWTC 2 cut(s) 148, 698
Tru1I TTAA 9 cut(s) 21, 206, 501, 609, 630, 672, 1172, 1233, 1245
Tru9I TTAA 9 cut(s) 21, 206, 501, 609, 630, 672, 1172, 1233, 1245
TscAI CASTG 2 cut(s) 105, 1350
TseFI GTSAC 4 cut(s) 100, 458, 1345, 1403
TseI GCWGC 5 cut(s) 183, 186, 569, 678, 1292
Tsp45I GTSAC 4 cut(s) 100, 458, 1345, 1403
TspDTI ATGAA 4 cut(s) 146, 203, 254, 976
TspGWI ACGGA 1 cut(s) 719
TspRI CASTG 2 cut(s) 105, 1350
XagI CCTNNNNNAGG 1 cut(s) 1184
XapI RAATTY 2 cut(s) 1333, 1660
XceI RCATGY 2 cut(s) 108, 407
XhoI CTCGAG 1 cut(s) 1114
XmnI GAANNNNTTC 1 cut(s) 757
XspI CTAG 5 cut(s) 662, 1053, 1238, 1323, 1526
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.