MD11G1038400.v1.1
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
3277800 .. 3280495
2696 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1038400.v1.1.491

Sequence Viewer

Length: 1653 bp
ATGTTATTTCTTAACTTATATGGTACGTTAGATATACGAAACAAGTCTCAACTGAATGGCCTCAATGTACCTGATGCAAGTTTGGTTCCAGTGACGTGCACTCAAGATGTTCTTGAGTTGATGAAAATCGGCCAAAAGAATCGCACTGTTGGCGCTACAGCTCTAAATGAGCGCAGCAGCCGGTCTCATAGTGTTTTAACAATTCATGTACTTGGAAAGGAGTTGGCTACTGGATCTATTCTAAGGGGTTGCCTCCATCTTGTGGATTTGGCCGGGAGCGAGAGAGTTGATAAATCCGAGGCTGTTGGCGAGAGGCTAAAGGAAGCCCAACACATAAATCGATCGCTTTCTGCACTCGGAGATGTCATATCTGCTCTTGCACAAAAGAGTACACATGTTCCTTACAGAAATAGCAAACTTACTCAAGTCTTGCAAGACTCTTTAGGTGGTCATGCAAAGACCATGATGTTTGTACATATAAATCCTGAACTTAATGCTCTCGGCGAGACGATCAGTACCCTCAAGTTTGCTGAGAGGGTTGCATCCATCGAACTTGGGGCAGCTCGATCTAATAAAGAAACGGGTGAAATCCGTGAACTTAAAGACGAGATTTCAAATCTTAAACTGGCATTGGAGAGAAAGGAAGCTGAGCTTGAGCAATTCAAAGGTGCCGCACAAAACGTCATGGAATCCCACAAGTCAAGAGCTGTTTCACCTTTCCGTGTTCCGAGAAATGGTACTGGAAACAGTTCAAAGCCTGAAAACTGTCAGCGACCCTTGGATGGTACTAAGATTTCTGAGGCTAGAAGTTGTTCTTCAGGCAAGCAAAGGCGGTCGAGATTTCCCTCTGCATTCGCCGACAAAGAGATTGCACCGAAGATGCCATTACTAGCTGAAGACAGATTAGTCATCCCTGGAAATCTCAGATCACCATCACCTCCAGTTAGGAGATCAATATCTACTGATAGAGGAGCCTTCATCAAAAGTAGAGTTAAGGCTGACACAACCGAAAACCAACCTATTGCGAAAGTACCATTTCCAGCTAGAGCACCTGTCAATAAATCCCTTGCAACCATGCCAGTGTTCCTATCAACAGACACCAACTCAAGGGTATGCATCAGTTCACAAGAACCAACAAAGCATGAGGACATTTTCGGTGCATTAAACAGCCTCCAGAAGGCCAACTCCAAGAAAGTTTACCAAGAACATGAAGAGGAGCAGTTTAAGAAAAATCTTAATGTAAGACAAGGCGGTATTAGAAAAATCAAGAATGAGAGTAAGGCAGCTAAGGCCAAGCAGAACCGGGTACCAGCTAGAATTCAAAATTCGGATGCAGTGACAACAATGTTTCCTAACTTGGATGCCGGTGAAAAGATGGAAGAGGCTCGAACGAGTGACTTCTCTGAGCCAGAAAATGAGCATATCCTCATTTCTTCACCCGTGCATAATCCTTTGATGGTAAAAAAGCTTCGGCAACCCTTGCCAAGGAACCACATAAATCTTGAACTGCGAGGACTAATGCAAGCGGCAGAACCTTTATTGGCTGGAAAACCAGAAAACAAGCTTCCAAATGGTGCAACACGGAATCAAAAAGAAGGCTGCAACATGACCATGTCTGAAATCAGAAGAAGCCGGTCCACACGAAATTTTTAG

Protein Analysis

551

Amino Acids

60.75

Weight (kDa)

9.77

Isoelectric Point (pI)

54.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 9 - 183 4.6e-63 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 905
Acc65I GGTACC 1 cut(s) 1306
AccB1I GGYRCC 2 cut(s) 668, 1306
AccB7I CCANNNNNTGG 1 cut(s) 262
AciI CCGC 4 cut(s) 672, 832, 1251, 1526
AclWI GGATC 1 cut(s) 241
AcoI YGGCCR 2 cut(s) 130, 270
AcsI RAATTY 3 cut(s) 1317, 1324, 1645
AcuI CTGAAG 2 cut(s) 801, 915
AfiI CCNNNNNNNGG 6 cut(s) 262, 734, 782, 1107, 1177, 1485
AflIII ACRYGT 1 cut(s) 394
AgsI TTSAA 5 cut(s) 615, 664, 753, 1322, 1505
AjiI CACGTC 1 cut(s) 96
AjnI CCWGG 1 cut(s) 913
Alw21I GWGCWC 2 cut(s) 101, 1051
Alw26I GTCTC 3 cut(s) 51, 189, 500
Alw44I GTGCAC 1 cut(s) 97
AlwI GGATC 1 cut(s) 241
AoxI GGCC 5 cut(s) 58, 130, 270, 1179, 1290
ApaLI GTGCAC 1 cut(s) 97
ApeKI GCWGC 5 cut(s) 174, 177, 560, 1283, 1599
ApoI RAATTY 3 cut(s) 1317, 1324, 1645
Asp700I GAANNNNTTC 2 cut(s) 748, 811
Asp718I GGTACC 1 cut(s) 1306
AspLEI GCGC 2 cut(s) 155, 174
AspS9I GGNCC 1 cut(s) 1635
AsuC2I CCSGG 2 cut(s) 274, 1304
AsuHPI GGTGA 6 cut(s) 596, 705, 921, 927, 1379, 1428
AvaII GGWCC 1 cut(s) 1635
BaeGI GKGCMC 1 cut(s) 101
BanI GGYRCC 2 cut(s) 668, 1306
BarI GAAGNNNNNNTAC 2 cut(s) 1452, 1484
BbsI GAAGAC 1 cut(s) 903
Bbv12I GWGCWC 2 cut(s) 101, 1051
BbvI GCAGC 5 cut(s) 186, 189, 572, 1295, 1586
BccI CCATC 6 cut(s) 264, 554, 776, 940, 1369, 1450
BciT130I CCWGG 1 cut(s) 915
BcnI CCSGG 2 cut(s) 274, 1304
BcoDI GTCTC 3 cut(s) 51, 189, 500
BfaI CTAG 4 cut(s) 804, 890, 1044, 1314
BfmI CTRYAG 1 cut(s) 156
BfoI RGCGCY 1 cut(s) 156
BisI GCNGC 7 cut(s) 175, 178, 561, 672, 1284, 1527, 1600
BlpI GCTNAGC 1 cut(s) 648
BlsI GCNGC 7 cut(s) 176, 179, 562, 673, 1285, 1528, 1601
Bme1390I CCNGG 3 cut(s) 274, 915, 1304
Bme18I GGWCC 1 cut(s) 1635
BmgBI CACGTC 1 cut(s) 96
BmgT120I GGNCC 1 cut(s) 1635
BmiI GGNNCC 5 cut(s) 87, 670, 973, 1308, 1490
BmrFI CCNGG 3 cut(s) 274, 915, 1304
BmsI GCATC 6 cut(s) 64, 551, 870, 1125, 1321, 1351
BpiI GAAGAC 1 cut(s) 903
BpmI CTGGAG 2 cut(s) 924, 1157
Bpu10I CCTNAGC 1 cut(s) 1287
Bpu1102I GCTNAGC 1 cut(s) 648
BpuEI CTTGAG 6 cut(s) 87, 134, 408, 506, 674, 1090
BpuMI CCSGG 2 cut(s) 274, 1304
Bsa29I ATCGAT 1 cut(s) 340
BsaBI GATNNNNATC 3 cut(s) 125, 931, 955
BsaI GGTCTC 1 cut(s) 189
BsaJI CCNNGG 4 cut(s) 297, 777, 913, 1484
Bsc4I CCNNNNNNNGG 6 cut(s) 262, 734, 782, 1107, 1177, 1485
Bse118I RCCGGY 3 cut(s) 180, 1364, 1632
Bse1I ACTGG 6 cut(s) 89, 235, 630, 745, 941, 1079
Bse8I GATNNNNATC 3 cut(s) 125, 931, 955
BseBI CCWGG 1 cut(s) 915
BseCI ATCGAT 1 cut(s) 340
BseDI CCNNGG 4 cut(s) 297, 777, 913, 1484
BseGI GGATG 5 cut(s) 542, 787, 909, 1336, 1366
BseJI GATNNNNATC 3 cut(s) 125, 931, 955
BseLI CCNNNNNNNGG 6 cut(s) 262, 734, 782, 1107, 1177, 1485
BseMII CTCAG 5 cut(s) 522, 639, 789, 937, 1395
BseNI ACTGG 6 cut(s) 89, 235, 630, 745, 941, 1079
BseRI GAGGAG 2 cut(s) 984, 1229
BseSI GKGCMC 1 cut(s) 101
BseXI GCAGC 5 cut(s) 186, 189, 572, 1295, 1586
BsgI GTGCAG 1 cut(s) 336
Bsh1285I CGRYCG 2 cut(s) 344, 836
BshFI GGCC 5 cut(s) 60, 132, 272, 1181, 1292
BshNI GGYRCC 2 cut(s) 668, 1306
BshVI ATCGAT 1 cut(s) 340
BsiEI CGRYCG 2 cut(s) 344, 836
BsiHKAI GWGCWC 2 cut(s) 101, 1051
BsiSI CCGG 5 cut(s) 181, 273, 1303, 1365, 1633
BslI CCNNNNNNNGG 6 cut(s) 262, 734, 782, 1107, 1177, 1485
BsmAI GTCTC 3 cut(s) 51, 189, 500
BsmBI CGTCTC 1 cut(s) 500
BsmI GAATGC 1 cut(s) 851
BsnI GGCC 5 cut(s) 60, 132, 272, 1181, 1292
Bso31I GGTCTC 1 cut(s) 189
Bsp1286I GDGCHC 2 cut(s) 101, 1051
Bsp1407I TGTACA 1 cut(s) 472
Bsp143I GATC 6 cut(s) 233, 341, 510, 566, 926, 950
Bsp1720I GCTNAGC 1 cut(s) 648
BspACI CCGC 4 cut(s) 672, 832, 1251, 1526
BspANI GGCC 5 cut(s) 60, 132, 272, 1181, 1292
BspCNI CTCAG 5 cut(s) 523, 640, 790, 936, 1396
BspDI ATCGAT 1 cut(s) 340
BspLI GGNNCC 5 cut(s) 87, 670, 973, 1308, 1490
BspPI GGATC 1 cut(s) 241
BspT107I GGYRCC 2 cut(s) 668, 1306
BspTNI GGTCTC 1 cut(s) 189
BsrFI RCCGGY 3 cut(s) 180, 1364, 1632
BsrGI TGTACA 1 cut(s) 472
BsrI ACTGG 6 cut(s) 89, 235, 630, 745, 941, 1079
BssAI RCCGGY 3 cut(s) 180, 1364, 1632
BssECI CCNNGG 4 cut(s) 297, 777, 913, 1484
BssMI GATC 6 cut(s) 233, 341, 510, 566, 926, 950
BssT1I CCWWGG 2 cut(s) 777, 1484
Bst2UI CCWGG 1 cut(s) 915
Bst4CI ACNGT 3 cut(s) 148, 749, 767
Bst6I CTCTTC 2 cut(s) 1206, 1374
BstAPI GCANNNNNTGC 1 cut(s) 1480
BstAUI TGTACA 1 cut(s) 472
BstC8I GCNNGC 2 cut(s) 824, 1524
BstDEI CTNAG 8 cut(s) 242, 531, 648, 789, 798, 923, 1287, 1404
BstENI CCTNNNNNAGG 2 cut(s) 1175, 1483
BstF5I GGATG 5 cut(s) 542, 787, 909, 1336, 1366
BstH2I RGCGCY 1 cut(s) 156
BstHHI GCGC 2 cut(s) 155, 174
BstKTI GATC 6 cut(s) 236, 344, 513, 569, 929, 953
BstMAI GTCTC 3 cut(s) 51, 189, 500
BstMBI GATC 6 cut(s) 233, 341, 510, 566, 926, 950
BstMCI CGRYCG 2 cut(s) 344, 836
BstMWI GCNNNNNNNGC 3 cut(s) 150, 1289, 1480
BstNI CCWGG 1 cut(s) 915
BstNSI RCATGY 1 cut(s) 398
BstSCI CCNGG 3 cut(s) 272, 913, 1302
BstSFI CTRYAG 1 cut(s) 156
BstSLI GKGCMC 1 cut(s) 101
BstV1I GCAGC 5 cut(s) 186, 189, 572, 1295, 1586
BstV2I GAAGAC 1 cut(s) 903
BstX2I RGATCY 1 cut(s) 233
BstYI RGATCY 1 cut(s) 233
Bsu15I ATCGAT 1 cut(s) 340
BsuRI GGCC 5 cut(s) 60, 132, 272, 1181, 1292
BsuTUI ATCGAT 1 cut(s) 340
BtrI CACGTC 1 cut(s) 96
BtsCI GGATG 5 cut(s) 542, 787, 909, 1336, 1366
BtsI GCAGTG 1 cut(s) 1341
BtsIMutI CAGTG 4 cut(s) 96, 144, 1086, 1341
Cac8I GCNNGC 2 cut(s) 824, 1524
CfoI GCGC 2 cut(s) 155, 174
Cfr10I RCCGGY 3 cut(s) 180, 1364, 1632
Cfr13I GGNCC 1 cut(s) 1635
ClaI ATCGAT 1 cut(s) 340
DdeI CTNAG 8 cut(s) 242, 531, 648, 789, 798, 923, 1287, 1404
DpnI GATC 6 cut(s) 235, 343, 512, 568, 928, 952
DpnII GATC 6 cut(s) 233, 341, 510, 566, 926, 950
DrdI GACNNNNNNGTC 1 cut(s) 905
DseDI GACNNNNNNGTC 1 cut(s) 905
EaeI YGGCCR 2 cut(s) 130, 270
Eam1104I CTCTTC 2 cut(s) 1206, 1374
EarI CTCTTC 2 cut(s) 1206, 1374
Eco130I CCWWGG 2 cut(s) 777, 1484
Eco31I GGTCTC 1 cut(s) 189
Eco47I GGWCC 1 cut(s) 1635
Eco57I CTGAAG 2 cut(s) 801, 915
EcoNI CCTNNNNNAGG 2 cut(s) 1175, 1483
EcoRI GAATTC 1 cut(s) 1317
EcoRII CCWGG 1 cut(s) 913
EcoT14I CCWWGG 2 cut(s) 777, 1484
EcoT22I ATGCAT 1 cut(s) 1118
ErhI CCWWGG 2 cut(s) 777, 1484
Esp3I CGTCTC 1 cut(s) 500
FalI AAGNNNNNCTT 6 cut(s) 96, 128, 636, 668, 799, 831
Fnu4HI GCNGC 7 cut(s) 175, 178, 561, 672, 1284, 1527, 1600
FokI GGATG 5 cut(s) 529, 794, 896, 1343, 1373
Fsp4HI GCNGC 7 cut(s) 175, 178, 561, 672, 1284, 1527, 1600
FspBI CTAG 4 cut(s) 804, 890, 1044, 1314
GlaI GCGC 2 cut(s) 154, 173
GluI GCNGC 7 cut(s) 175, 178, 561, 672, 1284, 1527, 1600
GsuI CTGGAG 2 cut(s) 924, 1157
HaeII RGCGCY 1 cut(s) 156
HaeIII GGCC 5 cut(s) 60, 132, 272, 1181, 1292
HapII CCGG 5 cut(s) 181, 273, 1303, 1365, 1633
HhaI GCGC 2 cut(s) 155, 174
Hin6I GCGC 2 cut(s) 153, 172
HinP1I GCGC 2 cut(s) 153, 172
HindIII AAGCTT 2 cut(s) 1466, 1562
HinfI GANTC 4 cut(s) 139, 437, 689, 1585
HpaII CCGG 5 cut(s) 181, 273, 1303, 1365, 1633
HphI GGTGA 6 cut(s) 596, 705, 921, 927, 1379, 1428
Hpy166II GTNNAC 6 cut(s) 99, 392, 596, 1124, 1198, 1638
Hpy188I TCNGA 9 cut(s) 298, 359, 729, 799, 926, 1330, 1405, 1618, 1625
Hpy188III TCNNGA 8 cut(s) 104, 113, 485, 702, 837, 1174, 1267, 1502
Hpy8I GTNNAC 6 cut(s) 99, 392, 596, 1124, 1198, 1638
HpyAV CCTTC 3 cut(s) 985, 1171, 1589
HpyCH4III ACNGT 3 cut(s) 148, 749, 767
HpyCH4IV ACGT 3 cut(s) 26, 95, 681
HpyF10VI GCNNNNNNNGC 3 cut(s) 150, 1289, 1480
HpyF3I CTNAG 8 cut(s) 242, 531, 648, 789, 798, 923, 1287, 1404
HpySE526I ACGT 3 cut(s) 26, 95, 681
HspAI GCGC 2 cut(s) 153, 172
KpnI GGTACC 1 cut(s) 1310
Kzo9I GATC 6 cut(s) 233, 341, 510, 566, 926, 950
LmnI GCTCC 3 cut(s) 276, 971, 1216
Lsp1109I GCAGC 5 cut(s) 186, 189, 572, 1295, 1586
LweI GCATC 6 cut(s) 64, 551, 870, 1125, 1321, 1351
MaeI CTAG 4 cut(s) 804, 890, 1044, 1314
MaeII ACGT 3 cut(s) 26, 95, 681
MaeIII GTNAC 3 cut(s) 91, 1336, 1394
MalI GATC 6 cut(s) 235, 343, 512, 568, 928, 952
MboI GATC 6 cut(s) 233, 341, 510, 566, 926, 950
MboII GAAGA 7 cut(s) 807, 889, 908, 1223, 1391, 1425, 1638
MflI RGATCY 1 cut(s) 233
MhlI GDGCHC 2 cut(s) 101, 1051
MluCI AATT 5 cut(s) 201, 659, 1317, 1324, 1645
MlyI GAGTC 1 cut(s) 431
Mph1103I ATGCAT 1 cut(s) 1118
MroXI GAANNNNTTC 2 cut(s) 748, 811
MseI TTAA 9 cut(s) 12, 197, 492, 600, 621, 993, 1163, 1224, 1236
MslI CAYNNNNRTG 2 cut(s) 1079, 1610
MspI CCGG 5 cut(s) 181, 273, 1303, 1365, 1633
MspR9I CCNGG 3 cut(s) 274, 915, 1304
Mva1269I GAATGC 1 cut(s) 851
MvaI CCWGG 1 cut(s) 915
MwoI GCNNNNNNNGC 3 cut(s) 150, 1289, 1480
NciI CCSGG 2 cut(s) 274, 1304
NdeII GATC 6 cut(s) 233, 341, 510, 566, 926, 950
NlaIV GGNNCC 5 cut(s) 87, 670, 973, 1308, 1490
NmeAIII GCCGAG 1 cut(s) 480
NmuCI GTSAC 3 cut(s) 91, 1336, 1394
NsiI ATGCAT 1 cut(s) 1118
NspI RCATGY 1 cut(s) 398
PciI ACATGT 1 cut(s) 394
PctI GAATGC 1 cut(s) 851
PdmI GAANNNNTTC 2 cut(s) 748, 811
PfeI GAWTC 3 cut(s) 139, 689, 1585
PflFI GACNNNGTC 1 cut(s) 1612
PflMI CCANNNNNTGG 1 cut(s) 262
PkrI GCNGC 7 cut(s) 176, 179, 562, 673, 1285, 1528, 1601
Ple19I CGATCG 1 cut(s) 344
PleI GAGTC 1 cut(s) 431
PpsI GAGTC 1 cut(s) 431
PscI ACATGT 1 cut(s) 394
Psp6I CCWGG 1 cut(s) 913
PspGI CCWGG 1 cut(s) 913
PspN4I GGNNCC 5 cut(s) 87, 670, 973, 1308, 1490
PspPI GGNCC 1 cut(s) 1635
PsuI RGATCY 1 cut(s) 233
PsyI GACNNNGTC 1 cut(s) 1612
PvuI CGATCG 1 cut(s) 344
RseI CAYNNNNRTG 2 cut(s) 1079, 1610
SaqAI TTAA 9 cut(s) 12, 197, 492, 600, 621, 993, 1163, 1224, 1236
SatI GCNGC 7 cut(s) 175, 178, 561, 672, 1284, 1527, 1600
Sau3AI GATC 6 cut(s) 233, 341, 510, 566, 926, 950
Sau96I GGNCC 1 cut(s) 1635
SchI GAGTC 1 cut(s) 431
ScrFI CCNGG 3 cut(s) 274, 915, 1304
SduI GDGCHC 2 cut(s) 101, 1051
SfaNI GCATC 6 cut(s) 64, 551, 870, 1125, 1321, 1351
SfcI CTRYAG 1 cut(s) 156
SinI GGWCC 1 cut(s) 1635
SmiMI CAYNNNNRTG 2 cut(s) 1079, 1610
SmlI CTYRAG 6 cut(s) 102, 113, 423, 521, 653, 1105
SmoI CTYRAG 6 cut(s) 102, 113, 423, 521, 653, 1105
Sse9I AATT 5 cut(s) 201, 659, 1317, 1324, 1645
SsiI CCGC 4 cut(s) 672, 832, 1251, 1526
SspMI CTAG 4 cut(s) 804, 890, 1044, 1314
StyD4I CCNGG 3 cut(s) 272, 913, 1302
StyI CCWWGG 2 cut(s) 777, 1484
TaaI ACNGT 3 cut(s) 148, 749, 767
TaiI ACGT 3 cut(s) 29, 98, 684
TaqI TCGA 5 cut(s) 340, 549, 565, 836, 1387
TasI AATT 5 cut(s) 201, 659, 1317, 1324, 1645
TatI WGTACW 3 cut(s) 208, 389, 472
TauI GCSGC 2 cut(s) 674, 1529
TfiI GAWTC 3 cut(s) 139, 689, 1585
Tru1I TTAA 9 cut(s) 12, 197, 492, 600, 621, 993, 1163, 1224, 1236
Tru9I TTAA 9 cut(s) 12, 197, 492, 600, 621, 993, 1163, 1224, 1236
TscAI CASTG 4 cut(s) 96, 151, 1086, 1341
TseFI GTSAC 3 cut(s) 91, 1336, 1394
TseI GCWGC 5 cut(s) 174, 177, 560, 1283, 1599
Tsp45I GTSAC 3 cut(s) 91, 1336, 1394
TspDTI ATGAA 4 cut(s) 137, 194, 967, 1224
TspGWI ACGGA 3 cut(s) 581, 710, 1597
TspRI CASTG 4 cut(s) 96, 151, 1086, 1341
Tth111I GACNNNGTC 1 cut(s) 1612
Van91I CCANNNNNTGG 1 cut(s) 262
VneI GTGCAC 1 cut(s) 97
VpaK11BI GGWCC 1 cut(s) 1635
XagI CCTNNNNNAGG 2 cut(s) 1175, 1483
XapI RAATTY 3 cut(s) 1317, 1324, 1645
XceI RCATGY 1 cut(s) 398
XmnI GAANNNNTTC 2 cut(s) 748, 811
XspI CTAG 4 cut(s) 804, 890, 1044, 1314
Zsp2I ATGCAT 1 cut(s) 1118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.