Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0007762

Physical Location & Seq

Genomic Coordinates Reverse (-)

6544320 .. 6549320

Gene Structure 5001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1081200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2796 bp

ATGGAAGGCTATTTAGAACCCAGAAGGACTTCCAATGATCAACAATCTGTGGGAACGTCTGGAAGCGTATCATGTCCAACAACTGCAAGCATAAACCAAGAAAACAAGTCCAAATCAAGAAAGTCTAGTCTGTCCTATGCTGATCTCCATCATGAGATTACAAAGAATATAAATGATATTCGACGTGATTCTGTTGGGTACCACCAAAAGCAGCAGATTGATAAAAAGAAAACGGAAGAAGATGAGCTTGTTAAGTACATGTCAAAGTTGCCAAGTTATCTTGAGAGGGGAAAAAACCTTCAGGAGAAAGTTTTAAATGTCGGTGTCCTAGACTGGGGGCGCCTAGAAAAATGGCAGCATAGCCATAAACAGATGCCACACAGAAGTAGCAGGTATTCACCGTCAAGTAGTAATACAACCTCATGTTTTTCGACAGATGAATCATCAACCCCTTCTAGCCGAGGCCACAGTTGTTCTCCTGCCCGACCAAAGGTGCGTCGTCCTTCACTGGAATCTCATTTCATGAAATCTCCAATAGAAGGCCATTCTGAAGTTGTCAACTGTTTTAGAGAAAGGGTTGAAAAGTTTCAAGATCTTAAAGTTGATGGGAGTAGCACCTTGAATGGGCTGGAAAAGTCCATTGGAACAGATAAATCTTTATGCAAAAACCGCCAAGACATCAAGGTGGAACAGTACATGAGAAAAGATTCAGACCCAAAGAGTGAGCCAGAAAAAGGAGTTTTGCGGACTGGCCCACATGAAATTGCAGCTCACGGTGAATTAATGAAGAAATCAGATAACTTAAGTAAACCATATTCAGAAAATTCTGAACGAGATATCCCTGAAGGATGCCAGAAAGTTGTTCTGCTTTTGCCTAGAGATCGTCCTGAAAACAAAGATTCTGGTGTTTCCAATCCATCTGATTCAATGAGTCTGCTTCATCAAAGAGCAGCGAAAGCAACCTGGGGAAGATTTTCAGGTAGACCCAAGGAGGCATGCCATGCAGAGCTCAGATCTGATATGCCACACTCATGCCCTTTCCCTTCTGAAGTTGAAAGGAAACACTCTCGGGTAAAACAGCTTGGCTCTGTAGATGCTACGAGTATCAGATTACATTCTAGTGTACCTTGCTCAGTAACACAGTCAGCTAAAACAGGAACAAGCCCATCAAGAGGCATAAAAGTAGAAGAGAGAAAAGCAGCTGTAGCCTCCGCATCTTCAACTGTAAGTGAGCCTTATAAAGGATTAGATCTGAAACCAAGCAAAGCGACTGCTGAAAAAGTAAGGAGCACTTCACCTTTTCGCCGATTTAGCATTGGCCTCGGTAAGATCGGTAAGATTTCCAGTTCTAAGGACTGTTCAGATGTACAGAAGCTGAGTTCAACAACTTTTTCAGCCAAACCTGGTTCCACGAACACTGTAACTTCCACTTTTATGGATGCTTCAGACGATGATAAGTCCAATTCCACTGGCAGAGCCAAGTCGAGCCCTCTGAGAAGGTTACTGGATCCACTGCTGAAACCAAAGGTGGCTAGCTGCCATCCCTTAGTGGAGCCATCAGAGAAAGGTTCCATATCAAAAAATAAGCTATGCAAGTCATCTGTGGGGCAAGTGGATTCTTTGTCTGAGCTGCCAGGGAAGGTAAAACTAGGTATGACTGGTTGCAGAACAATTAATGTCAATGAGTCAGCTATGGTCAAGAGGAGTGGATCCACAGCAGTTCAAGCTCTTCTACGAGTTGCAGTTAAGAATGGCCTGCCCCTTTTCACATTTGCGGTTGACAATGACATTGACATTCTTGCAGCCACAGTGAAGAAGTTAAATACCTCCAAAAATGATGACTGCAGCTGCATCTACACATTCTTCAGCATCCGGGAAGTCAAGAAAAAGACTGGAACTTGGATGCATCAAGGCAGCAAAAGCAAGAGTCATGACTATGTCCATAATGTTGTGGCTCAAATGAAGGTTGCTGATTCTCAGTTTCCCAATTTGGTCAGACTGGAAGACTTTAACGTTAGAGAGTTTGTTTTATTCTCTGTAAACCTGAGACAGGCAGATTGTCAAACCTCAGACTTCCAGCCAAACGATGAGCTTGCCGCCGCTGTTGTCAAAATCCCGAAAACGACCAATCAGCAGTCTACCAGAGTTTGGCATGATAGGGATAACTGTAGTATCTTTCCTGTGGTTGGTTCAGATGAGTGTTTGTCAAGTGTAAGACGCCATTCTTATTCTGGGGAAGCTATAGACGGTAAGCCTTTTGTTGGTACTCAAGGCCTTATTAGCACAACAGTGATACTTCCTACTGGTACCCATAGTCTACCAAGCAACGGAGGACCGTCGTCACTGATTAAACGTTGGAGTTCAGGCGGATCATGTGACTGTGGAGGTTGGGATTTGGGTTGCAAACTAAGGATACTTGACAATCAGAATCAAGTCAGCGAGAAATTGACCTCACATAAAGTTTGCCACATCACAGATCGGTTTGAGCTTTATTCTGAGGGAGGATTACAAGAAAACCAGCCTGCATTCAGTTTGGCCCCATTCAAAGATGGGATCTATTCAGTTGAGTTCAATCCTTCACTCTCAATCTTACAAGCATTCTCCATATGTATAGCAGTATTAGATAGTCGGAATCTGTGTGAGTTCTCTGTGTCAAGGAACTCGTTACAAGAAAAAACTTTCGGGGAAACGATGTTAATGCAAAATGATGGATTAAGTCTTCCAGATCGAACTGAAGGGGAAGTTCCTGCAAGATATTCCTCATATCCCCCACTTTCTCCAGTCGGGAGGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3527

Protein Analysis

932

Amino Acids

102.53

Weight (kDa)

9.08

Isoelectric Point (pI)

51.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3527	PF12043	572 - 713	6.2e-14	Domain of unknown function (DUF3527)
DUF3527	PF12043	686 - 876	2.7e-41	Domain of unknown function (DUF3527)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007762)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29510 AT5G59020
fragaria_vesca	FvH4_3g37380
malus_domestica	MD03G1081200.v1.1 MD03G1081600.v1.1 MD11G1084800.v1.1
prunus_persica	Prupe.6G065800_v2.0.a1 Prupe.6G065800_v2.0.a1 Prupe.6G065800_v2.0.a1 Prupe.6G065800_v2.0.a1
pyrus_communis	pycom03g06480 pycom11g07330
rosa_chinensis	RchiOBHm_Chr5g0067231
rosa_laevigata	RLG00000035917
rosa_multiflora	Rmu_sc0000015.1_g000018
rosa_roxburghii	Rroxscaffold_1G00013900
rosa_rugosa	Rorug05G0382800 Rorug05G0382900 Rorug05G0383000
rosa_samantha	Rh5AG442500 Rh5BG459600 Rh5CG482000 Rh5DG474500
rosa_wichuraiana	Rw5G041350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1239
Acc36I	ACCTGC	1 cut(s)	381
Acc65I	GGTACC	2 cut(s)	198, 2306
AccB1I	GGYRCC	3 cut(s)	198, 339, 2306
AccB7I	CCANNNNNTGG	1 cut(s)	2148
AccI	GTMKAC	3 cut(s)	982, 2138, 2317
AciI	CCGC	7 cut(s)	670, 745, 1212, 1775, 2097, 2100, 2367
AclI	AACGTT	2 cut(s)	2013, 2353
AclWI	GGATC	6 cut(s)	1502, 1515, 1704, 1717, 2377, 2561
AcsI	RAATTY	1 cut(s)	823
AcuI	CTGAAG	7 cut(s)	284, 570, 864, 1068, 1428, 1849, 2754
AcyI	GRCGYC	2 cut(s)	340, 2218
AfaI	GTAC	7 cut(s)	200, 257, 695, 1125, 1368, 2266, 2308
AflII	CTTAAG	1 cut(s)	802
AflIII	ACRYGT	1 cut(s)	258
AjiI	CACGTC	1 cut(s)	185
AjnI	CCWGG	3 cut(s)	962, 1402, 1633
AjuI	GAANNNNNNNTTGG	2 cut(s)	624, 656
AleI	CACNNNNGTG	1 cut(s)	2288
AloI	GAACNNNNNNTCC	2 cut(s)	822, 854
Alw21I	GWGCWC	2 cut(s)	1011, 1292
Alw26I	GTCTC	1 cut(s)	2041
AlwI	GGATC	6 cut(s)	1502, 1515, 1704, 1717, 2377, 2561
AlwNI	CAGNNNCTG	1 cut(s)	1375
Ama87I	CYCGRG	1 cut(s)	1068
AoxI	GGCC	7 cut(s)	463, 541, 751, 1318, 1753, 2272, 2535
ApoI	RAATTY	1 cut(s)	823
AseI	ATTAAT	2 cut(s)	782, 1674
Asp700I	GAANNNNTTC	4 cut(s)	28, 585, 706, 973
Asp718I	GGTACC	2 cut(s)	198, 2306
AspLEI	GCGC	1 cut(s)	342
AspS9I	GGNCC	3 cut(s)	752, 2333, 2536
AsuC2I	CCSGG	1 cut(s)	1874
AsuHPI	GGTGA	3 cut(s)	390, 788, 1287
AsuNHI	GCTAGC	1 cut(s)	1532
AvaI	CYCGRG	1 cut(s)	1068
AvaII	GGWCC	1 cut(s)	2333
BaeI	ACNNNNGTAYC	2 cut(s)	2155, 2188
BamHI	GGATCC	2 cut(s)	1507, 1709
BanI	GGYRCC	3 cut(s)	198, 339, 2306
BanII	GRGCYC	2 cut(s)	1011, 1490
BbsI	GAAGAC	2 cut(s)	2010, 2711
Bbv12I	GWGCWC	2 cut(s)	1011, 1292
BccI	CCATC	8 cut(s)	156, 599, 925, 1174, 1548, 1564, 2543, 2702
BcgI	CGANNNNNNTGC	6 cut(s)	1303, 1337, 2075, 2109, 2680, 2714
BciT130I	CCWGG	3 cut(s)	964, 1404, 1635
BciVI	GTATCC	1 cut(s)	2406
BclI	TGATCA	1 cut(s)	37
BcnI	CCSGG	1 cut(s)	1874
BcoDI	GTCTC	1 cut(s)	2041
BfaI	CTAG	9 cut(s)	126, 329, 344, 456, 876, 1119, 1533, 1649, 2794
BfmI	CTRYAG	5 cut(s)	1089, 1203, 1843, 2167, 2241
BfoI	RGCGCY	1 cut(s)	343
BfrI	CTTAAG	1 cut(s)	802
BfuAI	ACCTGC	1 cut(s)	381
BfuI	GTATCC	1 cut(s)	2406
BglII	AGATCT	3 cut(s)	592, 1013, 1249
Bme1390I	CCNGG	4 cut(s)	964, 1404, 1635, 1874
Bme18I	GGWCC	1 cut(s)	2333
BmeT110I	CYCGRG	1 cut(s)	1068
BmgBI	CACGTC	1 cut(s)	185
BmgT120I	GGNCC	3 cut(s)	752, 2333, 2536
BmiI	GGNNCC	9 cut(s)	200, 341, 1408, 1509, 1554, 1570, 1711, 2308, 2538
BmrFI	CCNGG	4 cut(s)	964, 1404, 1635, 1874
BmrI	ACTGGG	1 cut(s)	343
BmsI	GCATC	9 cut(s)	363, 839, 1084, 1223, 1429, 1860, 1878, 1893, 1915
BmtI	GCTAGC	1 cut(s)	1536
BmuI	ACTGGG	1 cut(s)	343
BoxI	GACNNNNGTC	1 cut(s)	2338
BpiI	GAAGAC	2 cut(s)	2010, 2711
BpmI	CTGGAG	1 cut(s)	2763
BpuEI	CTTGAG	2 cut(s)	302, 2253
BpuMI	CCSGG	1 cut(s)	1874
BsaBI	GATNNNNATC	1 cut(s)	147
BsaHI	GRCGYC	2 cut(s)	340, 2218
BsaJI	CCNNGG	5 cut(s)	460, 963, 987, 1321, 1634
Bse8I	GATNNNNATC	1 cut(s)	147
BseBI	CCWGG	3 cut(s)	964, 1404, 1635
BseDI	CCNNGG	5 cut(s)	460, 963, 987, 1321, 1634
BseGI	GGATG	5 cut(s)	854, 1444, 1540, 1869, 1908
BseJI	GATNNNNATC	1 cut(s)	147
BseMII	CTCAG	9 cut(s)	1024, 1146, 1367, 1484, 1617, 1991, 2036, 2082, 2487
BseRI	GAGGAG	1 cut(s)	1717
BshFI	GGCC	7 cut(s)	465, 543, 753, 1320, 1755, 2274, 2537
BshNI	GGYRCC	3 cut(s)	198, 339, 2306
BsiHKAI	GWGCWC	2 cut(s)	1011, 1292
BsiHKCI	CYCGRG	1 cut(s)	1068
BsiSI	CCGG	1 cut(s)	1873
BsmAI	GTCTC	1 cut(s)	2041
BsmI	GAATGC	2 cut(s)	2525, 2597
BsnI	GGCC	7 cut(s)	465, 543, 753, 1320, 1755, 2274, 2537
BsoBI	CYCGRG	1 cut(s)	1068
Bsp1286I	GDGCHC	3 cut(s)	1011, 1292, 1490
Bsp1407I	TGTACA	1 cut(s)	1366
BspACI	CCGC	7 cut(s)	670, 745, 1212, 1775, 2097, 2100, 2367
BspANI	GGCC	7 cut(s)	465, 543, 753, 1320, 1755, 2274, 2537
BspCNI	CTCAG	9 cut(s)	1023, 1145, 1368, 1485, 1618, 1990, 2037, 2081, 2488
BspHI	TCATGA	3 cut(s)	151, 522, 1930
BspLI	GGNNCC	9 cut(s)	200, 341, 1408, 1509, 1554, 1570, 1711, 2308, 2538
BspMAI	CTGCAG	1 cut(s)	1847
BspMI	ACCTGC	1 cut(s)	381
BspOI	GCTAGC	1 cut(s)	1536
BspPI	GGATC	6 cut(s)	1502, 1515, 1704, 1717, 2377, 2561
BspQI	GCTCTTC	1 cut(s)	1734
BspT107I	GGYRCC	3 cut(s)	198, 339, 2306
BspTI	CTTAAG	1 cut(s)	802
BsrGI	TGTACA	1 cut(s)	1366
BssECI	CCNNGG	5 cut(s)	460, 963, 987, 1321, 1634
BssNI	GRCGYC	2 cut(s)	340, 2218
BssT1I	CCWWGG	1 cut(s)	987
Bst2UI	CCWGG	3 cut(s)	964, 1404, 1635
Bst6I	CTCTTC	2 cut(s)	1182, 1734
BstACI	GRCGYC	2 cut(s)	340, 2218
BstAFI	CTTAAG	1 cut(s)	802
BstAPI	GCANNNNNTGC	1 cut(s)	1001
BstAUI	TGTACA	1 cut(s)	1366
BstC8I	GCNNGC	6 cut(s)	88, 997, 1534, 1757, 2094, 2523
BstENI	CCTNNNNNAGG	2 cut(s)	1239, 2048
BstF5I	GGATG	5 cut(s)	854, 1444, 1540, 1869, 1908
BstH2I	RGCGCY	1 cut(s)	343
BstHHI	GCGC	1 cut(s)	342
BstMAI	GTCTC	1 cut(s)	2041
BstMWI	GCNNNNNNNGC	8 cut(s)	669, 956, 1001, 1205, 1311, 1724, 1920, 2280
BstNI	CCWGG	3 cut(s)	964, 1404, 1635
BstNSI	RCATGY	2 cut(s)	262, 999
BstPAI	GACNNNNGTC	1 cut(s)	2338
BstSCI	CCNGG	4 cut(s)	962, 1402, 1633, 1872
BstSFI	CTRYAG	5 cut(s)	1089, 1203, 1843, 2167, 2241
BstV2I	GAAGAC	2 cut(s)	2010, 2711
BstX2I	RGATCY	6 cut(s)	592, 1013, 1249, 1507, 1709, 2553
BstXI	CCANNNNNNTGG	1 cut(s)	1435
BstYI	RGATCY	6 cut(s)	592, 1013, 1249, 1507, 1709, 2553
BsuI	GTATCC	1 cut(s)	2406
BsuRI	GGCC	7 cut(s)	465, 543, 753, 1320, 1755, 2274, 2537
BtrI	CACGTC	1 cut(s)	185
BtsCI	GGATG	5 cut(s)	854, 1444, 1540, 1869, 1908
BtsI	GCAGTG	1 cut(s)	1511
BtsIMutI	CAGTG	7 cut(s)	506, 1416, 1467, 1511, 1815, 2295, 2342
BveI	ACCTGC	1 cut(s)	381
Cac8I	GCNNGC	6 cut(s)	88, 997, 1534, 1757, 2094, 2523
CaiI	CAGNNNCTG	1 cut(s)	1375
CciI	TCATGA	3 cut(s)	151, 522, 1930
CfoI	GCGC	1 cut(s)	342
Cfr13I	GGNCC	3 cut(s)	752, 2333, 2536
CseI	GACGC	2 cut(s)	485, 2226
CsiI	ACCWGGT	1 cut(s)	1402
Csp6I	GTAC	7 cut(s)	199, 256, 694, 1124, 1367, 2265, 2307
CspCI	CAANNNNNGTGG	2 cut(s)	1687, 1722
CviQI	GTAC	7 cut(s)	199, 256, 694, 1124, 1367, 2265, 2307
DinI	GGCGCC	1 cut(s)	341
DraI	TTTAAA	1 cut(s)	315
Eam1104I	CTCTTC	2 cut(s)	1182, 1734
EarI	CTCTTC	2 cut(s)	1182, 1734
EciI	GGCGGA	1 cut(s)	2382
Ecl136II	GAGCTC	1 cut(s)	1009
Eco130I	CCWWGG	1 cut(s)	987
Eco147I	AGGCCT	1 cut(s)	2274
Eco24I	GRGCYC	2 cut(s)	1011, 1490
Eco32I	GATATC	1 cut(s)	838
Eco47I	GGWCC	1 cut(s)	2333
Eco53kI	GAGCTC	1 cut(s)	1009
Eco57I	CTGAAG	7 cut(s)	284, 570, 864, 1068, 1428, 1849, 2754
Eco88I	CYCGRG	1 cut(s)	1068
EcoICRI	GAGCTC	1 cut(s)	1009
EcoNI	CCTNNNNNAGG	2 cut(s)	1239, 2048
EcoRII	CCWGG	3 cut(s)	962, 1402, 1633
EcoRV	GATATC	1 cut(s)	838
EcoT14I	CCWWGG	1 cut(s)	987
EcoT22I	ATGCAT	1 cut(s)	1908
EcoT38I	GRGCYC	2 cut(s)	1011, 1490
EgeI	GGCGCC	1 cut(s)	341
EheI	GGCGCC	1 cut(s)	341
ErhI	CCWWGG	1 cut(s)	987
FalI	AAGNNNNNCTT	6 cut(s)	231, 263, 1219, 1251, 1276, 1308
FauNDI	CATATG	1 cut(s)	2606
FbaI	TGATCA	1 cut(s)	37
FblI	GTMKAC	3 cut(s)	982, 2138, 2317
FokI	GGATG	5 cut(s)	861, 1451, 1527, 1856, 1915
FriOI	GRGCYC	2 cut(s)	1011, 1490
FspBI	CTAG	9 cut(s)	126, 329, 344, 456, 876, 1119, 1533, 1649, 2794
GlaI	GCGC	1 cut(s)	341
GsuI	CTGGAG	1 cut(s)	2763
HaeII	RGCGCY	1 cut(s)	343
HaeIII	GGCC	7 cut(s)	465, 543, 753, 1320, 1755, 2274, 2537
HapII	CCGG	1 cut(s)	1873
HgaI	GACGC	2 cut(s)	485, 2226
HhaI	GCGC	1 cut(s)	342
Hin1I	GRCGYC	2 cut(s)	340, 2218
Hin6I	GCGC	1 cut(s)	340
HinP1I	GCGC	1 cut(s)	340
HincII	GTYRAC	2 cut(s)	559, 1780
HindII	GTYRAC	2 cut(s)	559, 1780
HpaII	CCGG	1 cut(s)	1873
HphI	GGTGA	3 cut(s)	390, 788, 1287
Hpy166II	GTNNAC	8 cut(s)	559, 809, 983, 1124, 1780, 2041, 2139, 2318
Hpy8I	GTNNAC	8 cut(s)	559, 809, 983, 1124, 1780, 2041, 2139, 2318
Hpy99I	CGWCG	3 cut(s)	186, 501, 2341
HpyCH4IV	ACGT	4 cut(s)	56, 184, 2013, 2353
HpyF10VI	GCNNNNNNNGC	8 cut(s)	669, 956, 1001, 1205, 1311, 1724, 1920, 2280
HpySE526I	ACGT	4 cut(s)	56, 184, 2013, 2353
Hsp92I	GRCGYC	2 cut(s)	340, 2218
HspAI	GCGC	1 cut(s)	340
KasI	GGCGCC	1 cut(s)	339
KpnI	GGTACC	2 cut(s)	202, 2310
Ksp22I	TGATCA	1 cut(s)	37
LguI	GCTCTTC	1 cut(s)	1734
LmnI	GCTCC	2 cut(s)	1287, 1552
LweI	GCATC	9 cut(s)	363, 839, 1084, 1223, 1429, 1860, 1878, 1893, 1915
MabI	ACCWGGT	1 cut(s)	1402
MaeI	CTAG	9 cut(s)	126, 329, 344, 456, 876, 1119, 1533, 1649, 2794
MaeII	ACGT	4 cut(s)	56, 184, 2013, 2353
MaeIII	GTNAC	6 cut(s)	1135, 1420, 1500, 2340, 2375, 2664
MflI	RGATCY	6 cut(s)	592, 1013, 1249, 1507, 1709, 2553
MhlI	GDGCHC	3 cut(s)	1011, 1292, 1490
MluCI	AATT	7 cut(s)	762, 779, 823, 1462, 1671, 1987, 2444
Mly113I	GGCGCC	1 cut(s)	340
MlyI	GAGTC	3 cut(s)	940, 1694, 1936
MmeI	TCCRAC	3 cut(s)	101, 2336, 2609
Mph1103I	ATGCAT	1 cut(s)	1908
MroXI	GAANNNNTTC	4 cut(s)	28, 585, 706, 973
MslI	CAYNNNNRTG	6 cut(s)	683, 1030, 1119, 1433, 1935, 2288
MspA1I	CMGCKG	3 cut(s)	1202, 1848, 2102
MspCI	CTTAAG	1 cut(s)	802
MspI	CCGG	1 cut(s)	1873
MspR9I	CCNGG	4 cut(s)	964, 1404, 1635, 1874
Mva1269I	GAATGC	2 cut(s)	2525, 2597
MvaI	CCWGG	3 cut(s)	964, 1404, 1635
MwoI	GCNNNNNNNGC	8 cut(s)	669, 956, 1001, 1205, 1311, 1724, 1920, 2280
NarI	GGCGCC	1 cut(s)	340
NciI	CCSGG	1 cut(s)	1874
NdeI	CATATG	1 cut(s)	2606
NheI	GCTAGC	1 cut(s)	1532
NlaIV	GGNNCC	9 cut(s)	200, 341, 1408, 1509, 1554, 1570, 1711, 2308, 2538
NmeAIII	GCCGAG	1 cut(s)	485
NmuCI	GTSAC	2 cut(s)	2340, 2375
NsiI	ATGCAT	1 cut(s)	1908
NspI	RCATGY	2 cut(s)	262, 999
OliI	CACNNNNGTG	1 cut(s)	2288
PaeI	GCATGC	1 cut(s)	999
PagI	TCATGA	3 cut(s)	151, 522, 1930
PceI	AGGCCT	1 cut(s)	2274
PciI	ACATGT	1 cut(s)	258
PciSI	GCTCTTC	1 cut(s)	1734
PctI	GAATGC	2 cut(s)	2525, 2597
PdmI	GAANNNNTTC	4 cut(s)	28, 585, 706, 973
PflFI	GACNNNGTC	1 cut(s)	1937
PflMI	CCANNNNNTGG	1 cut(s)	2148
PfoI	TCCNGGA	1 cut(s)	1872
PleI	GAGTC	3 cut(s)	939, 1693, 1935
PluTI	GGCGCC	1 cut(s)	343
PpsI	GAGTC	3 cut(s)	939, 1693, 1935
PscI	ACATGT	1 cut(s)	258
PshAI	GACNNNNGTC	1 cut(s)	2338
PshBI	ATTAAT	2 cut(s)	782, 1674
PsiI	TTATAA	1 cut(s)	1239
Psp124BI	GAGCTC	1 cut(s)	1011
Psp1406I	AACGTT	2 cut(s)	2013, 2353
Psp6I	CCWGG	3 cut(s)	962, 1402, 1633
PspGI	CCWGG	3 cut(s)	962, 1402, 1633
PspN4I	GGNNCC	9 cut(s)	200, 341, 1408, 1509, 1554, 1570, 1711, 2308, 2538
PspPI	GGNCC	3 cut(s)	752, 2333, 2536
PstI	CTGCAG	1 cut(s)	1847
PstNI	CAGNNNCTG	1 cut(s)	1375
PsuI	RGATCY	6 cut(s)	592, 1013, 1249, 1507, 1709, 2553
PsyI	GACNNNGTC	1 cut(s)	1937
PvuII	CAGCTG	2 cut(s)	1202, 1848
RsaI	GTAC	7 cut(s)	200, 257, 695, 1125, 1368, 2266, 2308
RsaNI	GTAC	7 cut(s)	199, 256, 694, 1124, 1367, 2265, 2307
RseI	CAYNNNNRTG	6 cut(s)	683, 1030, 1119, 1433, 1935, 2288
SacI	GAGCTC	1 cut(s)	1011
SapI	GCTCTTC	1 cut(s)	1734
Sau96I	GGNCC	3 cut(s)	752, 2333, 2536
SchI	GAGTC	3 cut(s)	940, 1694, 1936
ScrFI	CCNGG	4 cut(s)	964, 1404, 1635, 1874
SduI	GDGCHC	3 cut(s)	1011, 1292, 1490
SexAI	ACCWGGT	1 cut(s)	1402
SfaNI	GCATC	9 cut(s)	363, 839, 1084, 1223, 1429, 1860, 1878, 1893, 1915
SfcI	CTRYAG	5 cut(s)	1089, 1203, 1843, 2167, 2241
SfoI	GGCGCC	1 cut(s)	341
SinI	GGWCC	1 cut(s)	2333
SmiMI	CAYNNNNRTG	6 cut(s)	683, 1030, 1119, 1433, 1935, 2288
SmlI	CTYRAG	3 cut(s)	281, 802, 2268
SmoI	CTYRAG	3 cut(s)	281, 802, 2268
SphI	GCATGC	1 cut(s)	999
Sse9I	AATT	7 cut(s)	762, 779, 823, 1462, 1671, 1987, 2444
SseBI	AGGCCT	1 cut(s)	2274
SsiI	CCGC	7 cut(s)	670, 745, 1212, 1775, 2097, 2100, 2367
SspDI	GGCGCC	1 cut(s)	339
SspMI	CTAG	9 cut(s)	126, 329, 344, 456, 876, 1119, 1533, 1649, 2794
SstI	GAGCTC	1 cut(s)	1011
StuI	AGGCCT	1 cut(s)	2274
StyD4I	CCNGG	4 cut(s)	962, 1402, 1633, 1872
StyI	CCWWGG	1 cut(s)	987
TaiI	ACGT	4 cut(s)	59, 187, 2016, 2356
TaqI	TCGA	4 cut(s)	181, 431, 1484, 2728
TasI	AATT	7 cut(s)	762, 779, 823, 1462, 1671, 1987, 2444
TatI	WGTACW	3 cut(s)	255, 693, 1366
TauI	GCSGC	2 cut(s)	2099, 2102
TscAI	CASTG	7 cut(s)	513, 1423, 1474, 1518, 1815, 2295, 2349
TseFI	GTSAC	2 cut(s)	2340, 2375
Tsp45I	GTSAC	2 cut(s)	2340, 2375
TspDTI	ATGAA	7 cut(s)	453, 511, 539, 774, 800, 929, 1976
TspGWI	ACGGA	2 cut(s)	248, 2343
TspRI	CASTG	7 cut(s)	513, 1423, 1474, 1518, 1815, 2295, 2349
Tth111I	GACNNNGTC	1 cut(s)	1937
Van91I	CCANNNNNTGG	1 cut(s)	2148
Vha464I	CTTAAG	1 cut(s)	802
VpaK11BI	GGWCC	1 cut(s)	2333
VspI	ATTAAT	2 cut(s)	782, 1674
XagI	CCTNNNNNAGG	2 cut(s)	1239, 2048
XapI	RAATTY	1 cut(s)	823
XceI	RCATGY	2 cut(s)	262, 999
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2228
XmiI	GTMKAC	3 cut(s)	982, 2138, 2317
XmnI	GAANNNNTTC	4 cut(s)	28, 585, 706, 973
XspI	CTAG	9 cut(s)	126, 329, 344, 456, 876, 1119, 1533, 1649, 2794
Zsp2I	ATGCAT	1 cut(s)	1908

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.