Rorug05G0383000

Domain of unknown function (DUF3527)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0007762
Physical Location & Seq
Reverse (-)
51938938 .. 51943168
4231 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0383000.1

Sequence Viewer

Length: 1920 bp
ATGAATCCCTCTGATTCAGCTGAGACGGAGAGTAGTCCAACATTGGCCTATCATGCCACGATACTAGAGGAGACCAAAGCAATGTTCTGTTCTGAATGGAATCAGCAAAAATCTATACCAATCAAGAAAAGCTTAAGCGGCATGGATACTAAGGTGTTCAAGGCGGCACAAGAGGGCAATATTGCTGCCCTTAGAGAACATAGTGATTATCTTCACCAAATATTGACTCCAACCAAAAACACAGTCCTCCATGTCTATATAGCTTGCGTAGGCAGTGCAAGGTTGACAGAGTCTGAAGAATTGCTGAAGTCAGCCGAGGCTGTAAGGGAGATGCTTAAGATGTGCCAGCGGCTACTATTGCAGCCAAACGAGAGCGGTGATACTGTCTTACACTTGGCGGCAAGACACGGACGTGCAGACATAGTTGGAATTCTTATTCAGGCTGCAAAAGACTGGCATGGTGACCTCGAGGAAGGTATCACATCAAAAGAAGTATGCTACCAATTTCTCATAAGAAGACCTAACGAGGAGAAAAACACATCCTTGCACGAGGCAGTGCGCTTTAATCATCTAGATGTGGTAAAGATATTGATTGGGGAAGACCCTGAGTTTTTGTACTCTGCTAATGATGCTGGCGAAACTCCAGTATACATGGCTGCAGAAAGAGGAAATCGCAAATTGGTTTATGAAATCCTCAACACCTGCACAAGTCCATCCTACCAAGGACCCGATGGTTTAACAGCTCTACACGTTGCAGCTGCCTACGGCCATGATCAAATAACGAGAAGACTACTAGAGAAGGAAATGACGCTAGCAACAGCAGCAAACGGAGAAGGATATACTCCACTTCATATGGCTGCATATAGTGGTCATGTTTCAATTGTGAAACAAATACTTGAATGTGACAAGTCCACTGCCTACATTGGCGGTATTGACAAGACGACACCCGTTCACCATGCAGCCTATGCAGGGCAAGTAGATGTACTGAAACAGCTTATTTTCTACTGCCCTGATAGTTTCGAATTGGTAGACAATGAAGGTCTCAATGCCCTACATTTTGCAATTATCGGTAATGAATATAAAGTAGAAGAGTTTGTTCGAAAAGATCCATGGCTTAGTAGCGTTCTTTTAAATAGCAAAGATGCTGCCGGGAACACACCTCTCCATCAAATTGCTACTTCTAAAAACTACGAAGGCTTGAAATTTATCAGTGATTCCAGAGTTGATAAGATGGCATTCAACAAAAAAAATAAGAACGCGCTAGACATCATTCTAAAGAGCACGAGTTCTCAGTGTAAGATAAATCTCTATAAAGGTTTGAAAAAGTCTGGTGCAAGAGTAGGTCAACGAAAGTCAAGAGACAAAGATGGTGGCACAGAAGACCAAGTAAGTAAAGGTGACAAAGAGTCAAAATACAAGGAAATAAAAGAATCTCATTTGGTAGTGTCGGCACTCATAGCAACTGTAACCTTCGGAGCAGGCTTCACTGTGCCTGGTGGTTATCAAAGTGAAAAAGGGTCGGATCAAGGTTTTGCAGTTCTATCAAGAAATGCAGCTTTCAAAGCATTTGTGATAACAAATACATTAGCCATGACTCTGTCCAGTTGTGCCGTCATGATACGCTTTTTCTTGTCGACGAAAGGGCAACATAGGTCAAGTTCATTCTCTATGGCACTAAATTGTACTTCTTTCGCCTTGATTGCAATGGTGGCTGCATTTCTTACCGGTACATATGCAGTATTAGGTGGCCGTTCTTCATTAGGACTTGCTATTGCGGCTTGTGTGCTCGGCAGCGTCTTCTTCTCGGTTTTGGGTTTTGTTTCCATTTCTCCAGCTTTCAATACTTTTCGTAACCGTACCAGTAATCTCGTAATCCGGATAGTTAAACGGCTCGATTTGGAGTATTATTTTTTATATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3527

Protein Analysis

639

Amino Acids

70.22

Weight (kDa)

7.9

Isoelectric Point (pI)

34.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 110 - 200 3.9e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 169 - 232 1.3e-06 Ankyrin repeats (3 copies)
Ank_4 PF13637 182 - 227 5.8e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 218 - 302 1.9e-15 Ankyrin repeats (3 copies)
Ank_4 PF13637 249 - 296 1.7e-09 Ankyrin repeats (many copies)
Ank_2 PF12796 318 - 411 5.5e-09 Ankyrin repeats (3 copies)
PGG PF13962 470 - 580 1.8e-28 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 710
AbsI CCTCGAGG 1 cut(s) 467
Acc36I ACCTGC 1 cut(s) 710
AccBSI CCGCTC 1 cut(s) 375
AccI GTMKAC 3 cut(s) 648, 1029, 1634
AccII CGCG 1 cut(s) 1259
AccIII TCCGGA 1 cut(s) 1875
AciI CCGC 7 cut(s) 138, 164, 349, 375, 398, 927, 1775
AclWI GGATC 2 cut(s) 1100, 1530
AcoI YGGCCR 2 cut(s) 766, 1747
AcsI RAATTY 2 cut(s) 429, 1202
AcuI CTGAAG 2 cut(s) 315, 326
AfaI GTAC 5 cut(s) 617, 984, 1684, 1729, 1858
AfiI CCNNNNNNNGG 1 cut(s) 969
AflII CTTAAG 2 cut(s) 133, 335
AflIII ACRYGT 1 cut(s) 748
AgeI ACCGGT 1 cut(s) 1724
AgsI TTSAA 8 cut(s) 160, 879, 899, 1201, 1240, 1321, 1561, 1840
AhdI GACNNNNNGTC 1 cut(s) 1405
AjiI CACGTC 1 cut(s) 413
AjnI CCWGG 1 cut(s) 1492
AjuI GAANNNNNNNTTGG 2 cut(s) 68, 100
AleI CACNNNNGTG 1 cut(s) 411
AluBI AGCT 8 cut(s) 20, 132, 263, 743, 758, 994, 1556, 1835
AluI AGCT 8 cut(s) 20, 132, 263, 743, 758, 994, 1556, 1835
Alw21I GWGCWC 2 cut(s) 1283, 1788
Alw26I GTCTC 4 cut(s) 17, 65, 1046, 1353
AlwI GGATC 2 cut(s) 1100, 1530
AlwNI CAGNNNCTG 1 cut(s) 293
Ama87I CYCGRG 1 cut(s) 467
Aor13HI TCCGGA 1 cut(s) 1875
AoxI GGCC 3 cut(s) 45, 766, 1747
ApoI RAATTY 2 cut(s) 429, 1202
ArsI GACNNNNNNTTYG 2 cut(s) 228, 260
AsiGI ACCGGT 1 cut(s) 1724
AspLEI GCGC 2 cut(s) 561, 1261
AspS9I GGNCC 1 cut(s) 725
AsuC2I CCSGG 1 cut(s) 1150
AsuHPI GGTGA 5 cut(s) 206, 389, 473, 944, 1409
AsuII TTCGAA 2 cut(s) 1020, 1099
AsuNHI GCTAGC 1 cut(s) 811
AvaI CYCGRG 1 cut(s) 467
AvaII GGWCC 1 cut(s) 725
BaeI ACNNNNGTAYC 2 cut(s) 138, 171
BauI CACGAG 2 cut(s) 548, 1282
BbsI GAAGAC 5 cut(s) 523, 606, 793, 1386, 1789
Bbv12I GWGCWC 2 cut(s) 1283, 1788
BccI CCATC 5 cut(s) 721, 725, 1173, 1225, 1361
BceAI ACGGC 4 cut(s) 781, 1595, 1734, 1904
BciT130I CCWGG 1 cut(s) 1494
BciVI GTATCC 1 cut(s) 139
BclI TGATCA 1 cut(s) 772
BcnI CCSGG 1 cut(s) 1150
BcoDI GTCTC 4 cut(s) 17, 65, 1046, 1353
BfaI CTAG 5 cut(s) 65, 572, 794, 812, 1262
BfmI CTRYAG 1 cut(s) 657
BfrI CTTAAG 2 cut(s) 133, 335
BfuAI ACCTGC 1 cut(s) 710
BfuI GTATCC 1 cut(s) 139
Bme1390I CCNGG 2 cut(s) 1150, 1494
Bme18I GGWCC 1 cut(s) 725
BmeRI GACNNNNNGTC 1 cut(s) 1405
BmeT110I CYCGRG 1 cut(s) 467
BmgBI CACGTC 1 cut(s) 413
BmgT120I GGNCC 1 cut(s) 725
BmiI GGNNCC 1 cut(s) 727
BmrFI CCNGG 2 cut(s) 1150, 1494
BmsI GCATC 3 cut(s) 321, 619, 1132
BmtI GCTAGC 1 cut(s) 815
BpiI GAAGAC 5 cut(s) 523, 606, 793, 1386, 1789
BpmI CTGGAG 2 cut(s) 627, 1815
Bpu14I TTCGAA 2 cut(s) 1020, 1099
BpuMI CCSGG 1 cut(s) 1150
BsaI GGTCTC 2 cut(s) 65, 1046
BsaJI CCNNGG 3 cut(s) 315, 721, 1109
BsaWI WCCGGW 2 cut(s) 1724, 1875
Bsc4I CCNNNNNNNGG 1 cut(s) 969
Bse118I RCCGGY 1 cut(s) 1724
Bse1I ACTGG 4 cut(s) 458, 644, 1602, 1860
Bse3DI GCAATG 2 cut(s) 87, 1710
BseAI TCCGGA 1 cut(s) 1875
BseBI CCWGG 1 cut(s) 1494
BseDI CCNNGG 3 cut(s) 315, 721, 1109
BseGI GGATG 2 cut(s) 539, 713
BseLI CCNNNNNNNGG 1 cut(s) 969
BseMI GCAATG 2 cut(s) 87, 1710
BseMII CTCAG 3 cut(s) 12, 597, 1304
BseNI ACTGG 4 cut(s) 458, 644, 1602, 1860
BseRI GAGGAG 2 cut(s) 83, 542
BsgI GTGCAG 2 cut(s) 435, 688
Bsh1236I CGCG 1 cut(s) 1259
BshFI GGCC 3 cut(s) 47, 768, 1749
BshTI ACCGGT 1 cut(s) 1724
BsiHKAI GWGCWC 2 cut(s) 1283, 1788
BsiHKCI CYCGRG 1 cut(s) 467
BsiSI CCGG 3 cut(s) 1149, 1725, 1876
BslI CCNNNNNNNGG 1 cut(s) 969
BsmAI GTCTC 4 cut(s) 17, 65, 1046, 1353
BsmBI CGTCTC 1 cut(s) 17
BsmI GAATGC 1 cut(s) 1235
BsnI GGCC 3 cut(s) 47, 768, 1749
Bso31I GGTCTC 2 cut(s) 65, 1046
BsoBI CYCGRG 1 cut(s) 467
Bsp119I TTCGAA 2 cut(s) 1020, 1099
Bsp1286I GDGCHC 2 cut(s) 1283, 1788
Bsp13I TCCGGA 1 cut(s) 1875
Bsp143I GATC 3 cut(s) 772, 1105, 1522
Bsp19I CCATGG 1 cut(s) 1109
BspACI CCGC 7 cut(s) 138, 164, 349, 375, 398, 927, 1775
BspANI GGCC 3 cut(s) 47, 768, 1749
BspCNI CTCAG 3 cut(s) 13, 598, 1303
BspEI TCCGGA 1 cut(s) 1875
BspFNI CGCG 1 cut(s) 1259
BspHI TCATGA 1 cut(s) 1614
BspLI GGNNCC 1 cut(s) 727
BspMAI CTGCAG 1 cut(s) 661
BspMI ACCTGC 1 cut(s) 710
BspOI GCTAGC 1 cut(s) 815
BspPI GGATC 2 cut(s) 1100, 1530
BspT104I TTCGAA 2 cut(s) 1020, 1099
BspTI CTTAAG 2 cut(s) 133, 335
BspTNI GGTCTC 2 cut(s) 65, 1046
BsrBI CCGCTC 1 cut(s) 375
BsrDI GCAATG 2 cut(s) 87, 1710
BsrFI RCCGGY 1 cut(s) 1724
BsrI ACTGG 4 cut(s) 458, 644, 1602, 1860
BssAI RCCGGY 1 cut(s) 1724
BssECI CCNNGG 3 cut(s) 315, 721, 1109
BssMI GATC 3 cut(s) 772, 1105, 1522
BssNAI GTATAC 1 cut(s) 649
BssSI CACGAG 2 cut(s) 548, 1282
BssT1I CCWWGG 2 cut(s) 721, 1109
Bst1107I GTATAC 1 cut(s) 649
Bst2BI CACGAG 2 cut(s) 548, 1282
Bst2UI CCWGG 1 cut(s) 1494
Bst4CI ACNGT 5 cut(s) 244, 385, 1465, 1489, 1856
Bst6I CTCTTC 1 cut(s) 1083
BstAFI CTTAAG 2 cut(s) 133, 335
BstAPI GCANNNNNTGC 1 cut(s) 965
BstBI TTCGAA 2 cut(s) 1020, 1099
BstC8I GCNNGC 5 cut(s) 265, 347, 634, 813, 1480
BstDEI CTNAG 6 cut(s) 21, 150, 191, 606, 1115, 1290
BstDSI CCRYGG 1 cut(s) 1109
BstEII GGTNACC 1 cut(s) 461
BstF5I GGATG 2 cut(s) 539, 713
BstFNI CGCG 1 cut(s) 1259
BstHHI GCGC 2 cut(s) 561, 1261
BstKTI GATC 3 cut(s) 775, 1108, 1525
BstMAI GTCTC 4 cut(s) 17, 65, 1046, 1353
BstMBI GATC 3 cut(s) 772, 1105, 1522
BstNI CCWGG 1 cut(s) 1494
BstPI GGTNACC 1 cut(s) 461
BstSCI CCNGG 2 cut(s) 1148, 1492
BstSFI CTRYAG 1 cut(s) 657
BstUI CGCG 1 cut(s) 1259
BstV2I GAAGAC 5 cut(s) 523, 606, 793, 1386, 1789
BstX2I RGATCY 1 cut(s) 1105
BstYI RGATCY 1 cut(s) 1105
BstZ17I GTATAC 1 cut(s) 649
BsuI GTATCC 1 cut(s) 139
BsuRI GGCC 3 cut(s) 47, 768, 1749
BtgI CCRYGG 1 cut(s) 1109
BtrI CACGTC 1 cut(s) 413
BtsCI GGATG 2 cut(s) 539, 713
BtsI GCAGTG 3 cut(s) 280, 561, 912
BtsIMutI CAGTG 6 cut(s) 280, 561, 912, 1216, 1298, 1485
BveI ACCTGC 1 cut(s) 710
Cac8I GCNNGC 5 cut(s) 265, 347, 634, 813, 1480
CaiI CAGNNNCTG 1 cut(s) 293
CciI TCATGA 1 cut(s) 1614
CfoI GCGC 2 cut(s) 561, 1261
Cfr10I RCCGGY 1 cut(s) 1724
Cfr13I GGNCC 1 cut(s) 725
CseI GACGC 2 cut(s) 817, 1783
Csp6I GTAC 5 cut(s) 616, 983, 1683, 1728, 1857
CspAI ACCGGT 1 cut(s) 1724
CspCI CAANNNNNGTGG 2 cut(s) 1351, 1386
CviQI GTAC 5 cut(s) 616, 983, 1683, 1728, 1857
DdeI CTNAG 6 cut(s) 21, 150, 191, 606, 1115, 1290
DpnI GATC 3 cut(s) 774, 1107, 1524
DpnII GATC 3 cut(s) 772, 1105, 1522
DraI TTTAAA 1 cut(s) 1131
DriI GACNNNNNGTC 1 cut(s) 1405
EaeI YGGCCR 2 cut(s) 766, 1747
Eam1104I CTCTTC 1 cut(s) 1083
Eam1105I GACNNNNNGTC 1 cut(s) 1405
EarI CTCTTC 1 cut(s) 1083
Eco130I CCWWGG 2 cut(s) 721, 1109
Eco31I GGTCTC 2 cut(s) 65, 1046
Eco47I GGWCC 1 cut(s) 725
Eco57I CTGAAG 2 cut(s) 315, 326
Eco88I CYCGRG 1 cut(s) 467
Eco91I GGTNACC 1 cut(s) 461
EcoO109I RGGNCCY 1 cut(s) 725
EcoO65I GGTNACC 1 cut(s) 461
EcoRI GAATTC 1 cut(s) 429
EcoRII CCWGG 1 cut(s) 1492
EcoT14I CCWWGG 2 cut(s) 721, 1109
ErhI CCWWGG 2 cut(s) 721, 1109
Esp3I CGTCTC 1 cut(s) 17
FalI AAGNNNNNCTT 2 cut(s) 116, 148
FauNDI CATATG 2 cut(s) 852, 1732
FbaI TGATCA 1 cut(s) 772
FblI GTMKAC 3 cut(s) 648, 1029, 1634
FokI GGATG 2 cut(s) 526, 700
FspBI CTAG 5 cut(s) 65, 572, 794, 812, 1262
GlaI GCGC 2 cut(s) 560, 1260
GsuI CTGGAG 2 cut(s) 627, 1815
HaeIII GGCC 3 cut(s) 47, 768, 1749
HapII CCGG 3 cut(s) 1149, 1725, 1876
HgaI GACGC 2 cut(s) 817, 1783
HhaI GCGC 2 cut(s) 561, 1261
Hin6I GCGC 2 cut(s) 559, 1259
HinP1I GCGC 2 cut(s) 559, 1259
HincII GTYRAC 3 cut(s) 285, 1346, 1635
HindII GTYRAC 3 cut(s) 285, 1346, 1635
HindIII AAGCTT 1 cut(s) 130
HinfI GANTC 9 cut(s) 4, 14, 100, 226, 290, 1214, 1406, 1430, 1594
HpaII CCGG 3 cut(s) 1149, 1725, 1876
HphI GGTGA 5 cut(s) 206, 389, 473, 944, 1409
Hpy166II GTNNAC 7 cut(s) 285, 649, 912, 952, 1030, 1346, 1635
Hpy188I TCNGA 5 cut(s) 13, 94, 295, 1475, 1522
Hpy188III TCNNGA 7 cut(s) 124, 572, 1218, 1356, 1545, 1615, 1876
Hpy8I GTNNAC 7 cut(s) 285, 649, 912, 952, 1030, 1346, 1635
Hpy99I CGWCG 1 cut(s) 1639
HpyAV CCTTC 6 cut(s) 467, 793, 827, 1031, 1187, 1480
HpyCH4III ACNGT 5 cut(s) 244, 385, 1465, 1489, 1856
HpyCH4IV ACGT 2 cut(s) 412, 750
HpyF3I CTNAG 6 cut(s) 21, 150, 191, 606, 1115, 1290
HpySE526I ACGT 2 cut(s) 412, 750
HspAI GCGC 2 cut(s) 559, 1259
Kpn2I TCCGGA 1 cut(s) 1875
Ksp22I TGATCA 1 cut(s) 772
Kzo9I GATC 3 cut(s) 772, 1105, 1522
LmnI GCTCC 1 cut(s) 1475
LweI GCATC 3 cut(s) 321, 619, 1132
MaeI CTAG 5 cut(s) 65, 572, 794, 812, 1262
MaeII ACGT 2 cut(s) 412, 750
MaeIII GTNAC 5 cut(s) 461, 902, 1397, 1465, 1850
MalI GATC 3 cut(s) 774, 1107, 1524
MbiI CCGCTC 1 cut(s) 375
MboI GATC 3 cut(s) 772, 1105, 1522
MfeI CAATTG 1 cut(s) 879
MflI RGATCY 1 cut(s) 1105
MhlI GDGCHC 2 cut(s) 1283, 1788
MlyI GAGTC 4 cut(s) 220, 299, 1415, 1588
MmeI TCCRAC 4 cut(s) 62, 254, 406, 1500
MroI TCCGGA 1 cut(s) 1875
MseI TTAA 6 cut(s) 134, 336, 564, 737, 1130, 1884
MslI CAYNNNNRTG 2 cut(s) 411, 573
MspA1I CMGCKG 3 cut(s) 20, 349, 758
MspCI CTTAAG 2 cut(s) 133, 335
MspI CCGG 3 cut(s) 1149, 1725, 1876
MspR9I CCNGG 2 cut(s) 1150, 1494
MunI CAATTG 1 cut(s) 879
Mva1269I GAATGC 1 cut(s) 1235
MvaI CCWGG 1 cut(s) 1494
MvnI CGCG 1 cut(s) 1259
NciI CCSGG 1 cut(s) 1150
NcoI CCATGG 1 cut(s) 1109
NdeI CATATG 2 cut(s) 852, 1732
NdeII GATC 3 cut(s) 772, 1105, 1522
NheI GCTAGC 1 cut(s) 811
NlaIV GGNNCC 1 cut(s) 727
NmeAIII GCCGAG 2 cut(s) 340, 1767
NmuCI GTSAC 3 cut(s) 461, 902, 1397
NspV TTCGAA 2 cut(s) 1020, 1099
OliI CACNNNNGTG 1 cut(s) 411
PaeR7I CTCGAG 1 cut(s) 467
PagI TCATGA 1 cut(s) 1614
PaqCI CACCTGC 1 cut(s) 710
PctI GAATGC 1 cut(s) 1235
PfeI GAWTC 5 cut(s) 4, 14, 100, 1214, 1430
PflFI GACNNNGTC 2 cut(s) 289, 1597
PinAI ACCGGT 1 cut(s) 1724
PleI GAGTC 4 cut(s) 220, 298, 1414, 1588
PpsI GAGTC 4 cut(s) 220, 298, 1414, 1588
PpuMI RGGWCCY 1 cut(s) 725
Psp5II RGGWCCY 1 cut(s) 725
Psp6I CCWGG 1 cut(s) 1492
PspEI GGTNACC 1 cut(s) 461
PspGI CCWGG 1 cut(s) 1492
PspN4I GGNNCC 1 cut(s) 727
PspPI GGNCC 1 cut(s) 725
PspPPI RGGWCCY 1 cut(s) 725
PspXI VCTCGAGB 1 cut(s) 467
PstI CTGCAG 1 cut(s) 661
PstNI CAGNNNCTG 1 cut(s) 293
PsuI RGATCY 1 cut(s) 1105
PsyI GACNNNGTC 2 cut(s) 289, 1597
PvuII CAGCTG 2 cut(s) 20, 758
RsaI GTAC 5 cut(s) 617, 984, 1684, 1729, 1858
RsaNI GTAC 5 cut(s) 616, 983, 1683, 1728, 1857
RseI CAYNNNNRTG 2 cut(s) 411, 573
SalI GTCGAC 1 cut(s) 1633
SaqAI TTAA 6 cut(s) 134, 336, 564, 737, 1130, 1884
Sau3AI GATC 3 cut(s) 772, 1105, 1522
Sau96I GGNCC 1 cut(s) 725
SchI GAGTC 4 cut(s) 220, 299, 1415, 1588
ScrFI CCNGG 2 cut(s) 1150, 1494
SduI GDGCHC 2 cut(s) 1283, 1788
SfaNI GCATC 3 cut(s) 321, 619, 1132
SfcI CTRYAG 1 cut(s) 657
Sfr274I CTCGAG 1 cut(s) 467
SfuI TTCGAA 2 cut(s) 1020, 1099
SinI GGWCC 1 cut(s) 725
SlaI CTCGAG 1 cut(s) 467
SmiMI CAYNNNNRTG 2 cut(s) 411, 573
SmlI CTYRAG 3 cut(s) 133, 335, 467
SmoI CTYRAG 3 cut(s) 133, 335, 467
SsiI CCGC 7 cut(s) 138, 164, 349, 375, 398, 927, 1775
SspI AATATT 2 cut(s) 181, 222
SspMI CTAG 5 cut(s) 65, 572, 794, 812, 1262
StyD4I CCNGG 2 cut(s) 1148, 1492
StyI CCWWGG 2 cut(s) 721, 1109
TaaI ACNGT 5 cut(s) 244, 385, 1465, 1489, 1856
TaiI ACGT 2 cut(s) 415, 753
TaqI TCGA 5 cut(s) 468, 1020, 1099, 1634, 1893
TatI WGTACW 3 cut(s) 615, 982, 1682
TauI GCSGC 5 cut(s) 141, 167, 352, 401, 1778
TfiI GAWTC 5 cut(s) 4, 14, 100, 1214, 1430
Tru1I TTAA 6 cut(s) 134, 336, 564, 737, 1130, 1884
Tru9I TTAA 6 cut(s) 134, 336, 564, 737, 1130, 1884
TscAI CASTG 6 cut(s) 280, 561, 919, 1216, 1298, 1492
TseFI GTSAC 3 cut(s) 461, 902, 1397
Tsp45I GTSAC 3 cut(s) 461, 902, 1397
TspDTI ATGAA 7 cut(s) 17, 702, 839, 1050, 1089, 1650, 1746
TspGWI ACGGA 3 cut(s) 41, 423, 843
TspRI CASTG 6 cut(s) 280, 561, 919, 1216, 1298, 1492
Tth111I GACNNNGTC 2 cut(s) 289, 1597
Vha464I CTTAAG 2 cut(s) 133, 335
VpaK11BI GGWCC 1 cut(s) 725
XapI RAATTY 2 cut(s) 429, 1202
XbaI TCTAGA 1 cut(s) 571
XcmI CCANNNNNNNNNTGG 1 cut(s) 728
XhoI CTCGAG 1 cut(s) 467
XmiI GTMKAC 3 cut(s) 648, 1029, 1634
XspI CTAG 5 cut(s) 65, 572, 794, 812, 1262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.