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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G44716 AT3G44716 |
| malus_domestica | MD03G1135900.v1.1 MD11G1158400.v1.1 |
| prunus_persica | Prupe.6G120200_v2.0.a1 |
| pyrus_communis | pycom03g09180 pycom11g12900 |
| rosa_chinensis | RchiOBHm_Chr5g0054991 |
| rosa_laevigata | RLG00000034954 |
| rosa_multiflora | Rmu_sc0003653.1_g000025 Rmu_sc0004354.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00025520 |
| rosa_rugosa | Rorug05G0289700 |
| rosa_samantha | Rh5AG359800 Rh5BG370800 Rh5CG393100 Rh5DG384600 |
| rosa_wichuraiana | Rw5G033850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 428 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 622 |
| Acc36I | ACCTGC | 1 cut(s) | 428 |
| AccII | CGCG | 1 cut(s) | 149 |
| AciI | CCGC | 2 cut(s) | 147, 166 |
| AclWI | GGATC | 2 cut(s) | 750, 763 |
| AcsI | RAATTY | 1 cut(s) | 139 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 434, 587 |
| AgsI | TTSAA | 9 cut(s) | 13, 72, 90, 144, 410, 447, 455, 613, 747 |
| AluBI | AGCT | 2 cut(s) | 440, 517 |
| AluI | AGCT | 2 cut(s) | 440, 517 |
| AlwI | GGATC | 2 cut(s) | 750, 763 |
| ApoI | RAATTY | 1 cut(s) | 139 |
| AspA2I | CCTAGG | 1 cut(s) | 326 |
| AsuHPI | GGTGA | 1 cut(s) | 409 |
| AsuII | TTCGAA | 1 cut(s) | 131 |
| AvrII | CCTAGG | 1 cut(s) | 326 |
| BamHI | GGATCC | 1 cut(s) | 755 |
| BbsI | GAAGAC | 1 cut(s) | 620 |
| BccI | CCATC | 4 cut(s) | 403, 464, 767, 787 |
| BclI | TGATCA | 1 cut(s) | 264 |
| BfaI | CTAG | 4 cut(s) | 44, 327, 518, 782 |
| BfuAI | ACCTGC | 1 cut(s) | 428 |
| BglII | AGATCT | 1 cut(s) | 541 |
| BlnI | CCTAGG | 1 cut(s) | 326 |
| BmiI | GGNNCC | 1 cut(s) | 757 |
| BmsI | GCATC | 2 cut(s) | 40, 440 |
| BoxI | GACNNNNGTC | 1 cut(s) | 666 |
| BpiI | GAAGAC | 1 cut(s) | 620 |
| BpmI | CTGGAG | 1 cut(s) | 456 |
| Bpu14I | TTCGAA | 1 cut(s) | 131 |
| BsaJI | CCNNGG | 1 cut(s) | 326 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 434, 587 |
| BseDI | CCNNGG | 1 cut(s) | 326 |
| BseGI | GGATG | 6 cut(s) | 31, 307, 532, 627, 633, 759 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 434, 587 |
| BseYI | CCCAGC | 1 cut(s) | 695 |
| Bsh1236I | CGCG | 1 cut(s) | 149 |
| Bsh1285I | CGRYCG | 1 cut(s) | 323 |
| BsiEI | CGRYCG | 1 cut(s) | 323 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 434, 587 |
| BsmI | GAATGC | 1 cut(s) | 8 |
| Bsp119I | TTCGAA | 1 cut(s) | 131 |
| Bsp143I | GATC | 6 cut(s) | 264, 320, 505, 541, 755, 802 |
| BspACI | CCGC | 2 cut(s) | 147, 166 |
| BspFNI | CGCG | 1 cut(s) | 149 |
| BspHI | TCATGA | 1 cut(s) | 502 |
| BspLI | GGNNCC | 1 cut(s) | 757 |
| BspMI | ACCTGC | 1 cut(s) | 428 |
| BspPI | GGATC | 2 cut(s) | 750, 763 |
| BspT104I | TTCGAA | 1 cut(s) | 131 |
| BssECI | CCNNGG | 1 cut(s) | 326 |
| BssMI | GATC | 6 cut(s) | 264, 320, 505, 541, 755, 802 |
| BssT1I | CCWWGG | 1 cut(s) | 326 |
| Bst4CI | ACNGT | 1 cut(s) | 348 |
| Bst6I | CTCTTC | 1 cut(s) | 770 |
| BstBI | TTCGAA | 1 cut(s) | 131 |
| BstC8I | GCNNGC | 3 cut(s) | 6, 425, 429 |
| BstF5I | GGATG | 6 cut(s) | 31, 307, 532, 627, 633, 759 |
| BstFNI | CGCG | 1 cut(s) | 149 |
| BstKTI | GATC | 6 cut(s) | 267, 323, 508, 544, 758, 805 |
| BstMBI | GATC | 6 cut(s) | 264, 320, 505, 541, 755, 802 |
| BstMCI | CGRYCG | 1 cut(s) | 323 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 437 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 666 |
| BstUI | CGCG | 1 cut(s) | 149 |
| BstV2I | GAAGAC | 1 cut(s) | 620 |
| BstX2I | RGATCY | 2 cut(s) | 541, 755 |
| BstYI | RGATCY | 2 cut(s) | 541, 755 |
| BtsCI | GGATG | 6 cut(s) | 31, 307, 532, 627, 633, 759 |
| BtsIMutI | CAGTG | 1 cut(s) | 805 |
| BveI | ACCTGC | 1 cut(s) | 428 |
| Cac8I | GCNNGC | 3 cut(s) | 6, 425, 429 |
| CciI | TCATGA | 1 cut(s) | 502 |
| CviAII | CATG | 4 cut(s) | 503, 523, 555, 587 |
| CviJI | RGCY | 7 cut(s) | 136, 160, 440, 475, 517, 676, 797 |
| CviKI_1 | RGCY | 7 cut(s) | 136, 160, 440, 475, 517, 676, 797 |
| DpnI | GATC | 6 cut(s) | 266, 322, 507, 543, 757, 804 |
| DpnII | GATC | 6 cut(s) | 264, 320, 505, 541, 755, 802 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 622 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 622 |
| Eam1104I | CTCTTC | 1 cut(s) | 770 |
| EarI | CTCTTC | 1 cut(s) | 770 |
| Eco130I | CCWWGG | 1 cut(s) | 326 |
| EcoT14I | CCWWGG | 1 cut(s) | 326 |
| ErhI | CCWWGG | 1 cut(s) | 326 |
| FaeI | CATG | 4 cut(s) | 506, 526, 558, 590 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 610, 642 |
| FatI | CATG | 4 cut(s) | 502, 522, 554, 586 |
| FbaI | TGATCA | 1 cut(s) | 264 |
| FokI | GGATG | 6 cut(s) | 18, 294, 519, 620, 634, 746 |
| FspBI | CTAG | 4 cut(s) | 44, 327, 518, 782 |
| GsaI | CCCAGC | 1 cut(s) | 699 |
| GsuI | CTGGAG | 1 cut(s) | 456 |
| Hin1II | CATG | 4 cut(s) | 506, 526, 558, 590 |
| HincII | GTYRAC | 1 cut(s) | 63 |
| HindII | GTYRAC | 1 cut(s) | 63 |
| HinfI | GANTC | 1 cut(s) | 451 |
| HpaI | GTTAAC | 1 cut(s) | 63 |
| HphI | GGTGA | 1 cut(s) | 409 |
| Hpy166II | GTNNAC | 1 cut(s) | 63 |
| Hpy188I | TCNGA | 3 cut(s) | 264, 510, 546 |
| Hpy188III | TCNNGA | 4 cut(s) | 13, 435, 455, 503 |
| Hpy8I | GTNNAC | 1 cut(s) | 63 |
| Hpy99I | CGWCG | 1 cut(s) | 665 |
| HpyAV | CCTTC | 4 cut(s) | 50, 288, 591, 593 |
| HpyCH4III | ACNGT | 1 cut(s) | 348 |
| HpyCH4IV | ACGT | 1 cut(s) | 645 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 31, 180, 431, 492, 729 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 437 |
| HpySE526I | ACGT | 1 cut(s) | 645 |
| Hsp92II | CATG | 4 cut(s) | 506, 526, 558, 590 |
| Ksp22I | TGATCA | 1 cut(s) | 264 |
| KspAI | GTTAAC | 1 cut(s) | 63 |
| Kzo9I | GATC | 6 cut(s) | 264, 320, 505, 541, 755, 802 |
| LmnI | GCTCC | 2 cut(s) | 397, 437 |
| LweI | GCATC | 2 cut(s) | 40, 440 |
| MaeI | CTAG | 4 cut(s) | 44, 327, 518, 782 |
| MaeII | ACGT | 1 cut(s) | 645 |
| MaeIII | GTNAC | 3 cut(s) | 101, 415, 557 |
| MalI | GATC | 6 cut(s) | 266, 322, 507, 543, 757, 804 |
| MboI | GATC | 6 cut(s) | 264, 320, 505, 541, 755, 802 |
| MboII | GAAGA | 3 cut(s) | 435, 625, 757 |
| MflI | RGATCY | 2 cut(s) | 541, 755 |
| MluCI | AATT | 6 cut(s) | 72, 93, 139, 231, 547, 685 |
| MmeI | TCCRAC | 2 cut(s) | 297, 375 |
| MnlI | CCTC | 6 cut(s) | 35, 223, 348, 496, 696, 773 |
| MseI | TTAA | 2 cut(s) | 62, 219 |
| Mva1269I | GAATGC | 1 cut(s) | 8 |
| MvnI | CGCG | 1 cut(s) | 149 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 437 |
| NdeII | GATC | 6 cut(s) | 264, 320, 505, 541, 755, 802 |
| NlaIII | CATG | 4 cut(s) | 506, 526, 558, 590 |
| NlaIV | GGNNCC | 1 cut(s) | 757 |
| NmeAIII | GCCGAG | 1 cut(s) | 136 |
| NmuCI | GTSAC | 2 cut(s) | 101, 415 |
| NspV | TTCGAA | 1 cut(s) | 131 |
| PagI | TCATGA | 1 cut(s) | 502 |
| PaqCI | CACCTGC | 1 cut(s) | 428 |
| PctI | GAATGC | 1 cut(s) | 8 |
| PfeI | GAWTC | 1 cut(s) | 451 |
| Ple19I | CGATCG | 1 cut(s) | 323 |
| PshAI | GACNNNNGTC | 1 cut(s) | 666 |
| PspFI | CCCAGC | 1 cut(s) | 695 |
| PspN4I | GGNNCC | 1 cut(s) | 757 |
| PsuI | RGATCY | 2 cut(s) | 541, 755 |
| PvuI | CGATCG | 1 cut(s) | 323 |
| SaqAI | TTAA | 2 cut(s) | 62, 219 |
| Sau3AI | GATC | 6 cut(s) | 264, 320, 505, 541, 755, 802 |
| SfaNI | GCATC | 2 cut(s) | 40, 440 |
| SfuI | TTCGAA | 1 cut(s) | 131 |
| Sse9I | AATT | 6 cut(s) | 72, 93, 139, 231, 547, 685 |
| SsiI | CCGC | 2 cut(s) | 147, 166 |
| SspMI | CTAG | 4 cut(s) | 44, 327, 518, 782 |
| StyI | CCWWGG | 1 cut(s) | 326 |
| TaaI | ACNGT | 1 cut(s) | 348 |
| TaiI | ACGT | 1 cut(s) | 648 |
| TaqI | TCGA | 3 cut(s) | 131, 319, 630 |
| TasI | AATT | 6 cut(s) | 72, 93, 139, 231, 547, 685 |
| TfiI | GAWTC | 1 cut(s) | 451 |
| Tru1I | TTAA | 2 cut(s) | 62, 219 |
| Tru9I | TTAA | 2 cut(s) | 62, 219 |
| TseFI | GTSAC | 2 cut(s) | 101, 415 |
| Tsp45I | GTSAC | 2 cut(s) | 101, 415 |
| TspDTI | ATGAA | 5 cut(s) | 276, 491, 521, 588, 612 |
| XapI | RAATTY | 1 cut(s) | 139 |
| XmaJI | CCTAGG | 1 cut(s) | 326 |
| XspI | CTAG | 4 cut(s) | 44, 327, 518, 782 |