No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G44716 AT3G44716 |
| malus_domestica | MD03G1135900.v1.1 MD11G1158400.v1.1 |
| prunus_persica | Prupe.6G120200_v2.0.a1 |
| pyrus_communis | pycom03g09180 pycom11g12900 |
| rosa_chinensis | RchiOBHm_Chr5g0054991 |
| rosa_laevigata | RLG00000034954 |
| rosa_multiflora | Rmu_sc0003653.1_g000025 Rmu_sc0004354.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00025520 |
| rosa_rugosa | Rorug05G0289700 |
| rosa_samantha | Rh5AG359800 Rh5BG370800 Rh5CG393100 Rh5DG384600 |
| rosa_wichuraiana | Rw5G033850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 549 |
| AccI | GTMKAC | 1 cut(s) | 342 |
| AclWI | GGATC | 3 cut(s) | 120, 522, 535 |
| AcsI | RAATTY | 1 cut(s) | 299 |
| AcuI | CTGAAG | 1 cut(s) | 339 |
| AfaI | GTAC | 1 cut(s) | 365 |
| AgsI | TTSAA | 6 cut(s) | 225, 233, 242, 319, 404, 519 |
| AleI | CACNNNNGTG | 1 cut(s) | 36 |
| AluBI | AGCT | 4 cut(s) | 110, 218, 272, 289 |
| AluI | AGCT | 4 cut(s) | 110, 218, 272, 289 |
| AlwI | GGATC | 3 cut(s) | 120, 522, 535 |
| ApoI | RAATTY | 1 cut(s) | 299 |
| AseI | ATTAAT | 1 cut(s) | 534 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 352 |
| AsuHPI | GGTGA | 4 cut(s) | 46, 168, 371, 479 |
| BamHI | GGATCC | 1 cut(s) | 527 |
| BccI | CCATC | 1 cut(s) | 178 |
| BclI | TGATCA | 1 cut(s) | 3 |
| BfaI | CTAG | 2 cut(s) | 269, 390 |
| BfmI | CTRYAG | 1 cut(s) | 343 |
| BmcAI | AGTACT | 1 cut(s) | 365 |
| BmiI | GGNNCC | 1 cut(s) | 529 |
| BmsI | GCATC | 1 cut(s) | 467 |
| BpmI | CTGGAG | 1 cut(s) | 234 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 74, 104 |
| Bse3DI | GCAATG | 1 cut(s) | 439 |
| BseMI | GCAATG | 1 cut(s) | 439 |
| BseMII | CTCAG | 1 cut(s) | 120 |
| BslFI | GGGAC | 1 cut(s) | 400 |
| BsmFI | GGGAC | 1 cut(s) | 400 |
| Bsp143I | GATC | 4 cut(s) | 3, 125, 277, 527 |
| BspCNI | CTCAG | 1 cut(s) | 119 |
| BspLI | GGNNCC | 1 cut(s) | 529 |
| BspPI | GGATC | 3 cut(s) | 120, 522, 535 |
| BsrDI | GCAATG | 1 cut(s) | 439 |
| BssMI | GATC | 4 cut(s) | 3, 125, 277, 527 |
| Bst6I | CTCTTC | 1 cut(s) | 67 |
| BstDEI | CTNAG | 1 cut(s) | 106 |
| BstKTI | GATC | 4 cut(s) | 6, 128, 280, 530 |
| BstMBI | GATC | 4 cut(s) | 3, 125, 277, 527 |
| BstNSI | RCATGY | 1 cut(s) | 201 |
| BstSFI | CTRYAG | 1 cut(s) | 343 |
| BstX2I | RGATCY | 1 cut(s) | 527 |
| BstYI | RGATCY | 1 cut(s) | 527 |
| BtsI | GCAGTG | 1 cut(s) | 469 |
| BtsIMutI | CAGTG | 1 cut(s) | 469 |
| Csp6I | GTAC | 1 cut(s) | 364 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 47, 82 |
| CviAII | CATG | 4 cut(s) | 198, 295, 327, 377 |
| CviJI | RGCY | 6 cut(s) | 25, 110, 218, 272, 289, 449 |
| CviKI_1 | RGCY | 6 cut(s) | 25, 110, 218, 272, 289, 449 |
| CviQI | GTAC | 1 cut(s) | 364 |
| DdeI | CTNAG | 1 cut(s) | 106 |
| DpnI | GATC | 4 cut(s) | 5, 127, 279, 529 |
| DpnII | GATC | 4 cut(s) | 3, 125, 277, 527 |
| Eam1104I | CTCTTC | 1 cut(s) | 67 |
| EarI | CTCTTC | 1 cut(s) | 67 |
| Eco57I | CTGAAG | 1 cut(s) | 339 |
| EcoT22I | ATGCAT | 1 cut(s) | 482 |
| FaeI | CATG | 4 cut(s) | 201, 298, 330, 380 |
| FaqI | GGGAC | 1 cut(s) | 400 |
| FatI | CATG | 4 cut(s) | 197, 294, 326, 376 |
| FauNDI | CATATG | 2 cut(s) | 8, 482 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| FblI | GTMKAC | 1 cut(s) | 342 |
| FspBI | CTAG | 2 cut(s) | 269, 390 |
| GsuI | CTGGAG | 1 cut(s) | 234 |
| Hin1II | CATG | 4 cut(s) | 201, 298, 330, 380 |
| HindIII | AAGCTT | 1 cut(s) | 287 |
| HinfI | GANTC | 3 cut(s) | 229, 339, 601 |
| HphI | GGTGA | 4 cut(s) | 46, 168, 371, 479 |
| Hpy166II | GTNNAC | 2 cut(s) | 266, 343 |
| Hpy188I | TCNGA | 1 cut(s) | 48 |
| Hpy188III | TCNNGA | 4 cut(s) | 123, 213, 233, 385 |
| Hpy8I | GTNNAC | 2 cut(s) | 266, 343 |
| HpyAV | CCTTC | 2 cut(s) | 110, 236 |
| HpyCH4V | TGCA | 4 cut(s) | 12, 432, 462, 480 |
| HpyF3I | CTNAG | 1 cut(s) | 106 |
| Hsp92II | CATG | 4 cut(s) | 201, 298, 330, 380 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 4 cut(s) | 3, 125, 277, 527 |
| LmnI | GCTCC | 1 cut(s) | 215 |
| LpnPI | CCDG | 4 cut(s) | 96, 198, 342, 423 |
| LweI | GCATC | 1 cut(s) | 467 |
| MaeI | CTAG | 2 cut(s) | 269, 390 |
| MaeIII | GTNAC | 1 cut(s) | 485 |
| MalI | GATC | 4 cut(s) | 5, 127, 279, 529 |
| MboI | GATC | 4 cut(s) | 3, 125, 277, 527 |
| MboII | GAAGA | 7 cut(s) | 54, 63, 66, 213, 243, 345, 383 |
| MfeI | CAATTG | 1 cut(s) | 457 |
| MflI | RGATCY | 1 cut(s) | 527 |
| MluCI | AATT | 5 cut(s) | 299, 319, 393, 457, 535 |
| MlyI | GAGTC | 1 cut(s) | 348 |
| MmeI | TCCRAC | 1 cut(s) | 153 |
| MnlI | CCTC | 2 cut(s) | 100, 582 |
| Mph1103I | ATGCAT | 1 cut(s) | 482 |
| MroXI | GAANNNNTTC | 1 cut(s) | 352 |
| MseI | TTAA | 2 cut(s) | 303, 534 |
| MslI | CAYNNNNRTG | 2 cut(s) | 36, 475 |
| MspA1I | CMGCKG | 1 cut(s) | 110 |
| MunI | CAATTG | 1 cut(s) | 457 |
| NdeI | CATATG | 2 cut(s) | 8, 482 |
| NdeII | GATC | 4 cut(s) | 3, 125, 277, 527 |
| NlaIII | CATG | 4 cut(s) | 201, 298, 330, 380 |
| NlaIV | GGNNCC | 1 cut(s) | 529 |
| NmuCI | GTSAC | 1 cut(s) | 485 |
| NsiI | ATGCAT | 1 cut(s) | 482 |
| NspI | RCATGY | 1 cut(s) | 201 |
| OliI | CACNNNNGTG | 1 cut(s) | 36 |
| PdmI | GAANNNNTTC | 1 cut(s) | 352 |
| PfeI | GAWTC | 2 cut(s) | 229, 601 |
| PleI | GAGTC | 1 cut(s) | 347 |
| PpsI | GAGTC | 1 cut(s) | 347 |
| PshBI | ATTAAT | 1 cut(s) | 534 |
| PsiI | TTATAA | 1 cut(s) | 549 |
| PspN4I | GGNNCC | 1 cut(s) | 529 |
| PsuI | RGATCY | 1 cut(s) | 527 |
| PvuII | CAGCTG | 1 cut(s) | 110 |
| RsaI | GTAC | 1 cut(s) | 365 |
| RsaNI | GTAC | 1 cut(s) | 364 |
| RseI | CAYNNNNRTG | 2 cut(s) | 36, 475 |
| SaqAI | TTAA | 2 cut(s) | 303, 534 |
| Sau3AI | GATC | 4 cut(s) | 3, 125, 277, 527 |
| ScaI | AGTACT | 1 cut(s) | 365 |
| SchI | GAGTC | 1 cut(s) | 348 |
| SetI | ASST | 7 cut(s) | 102, 112, 220, 274, 291, 361, 513 |
| SfaNI | GCATC | 1 cut(s) | 467 |
| SfcI | CTRYAG | 1 cut(s) | 343 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 36, 475 |
| Sse9I | AATT | 5 cut(s) | 299, 319, 393, 457, 535 |
| SspMI | CTAG | 2 cut(s) | 269, 390 |
| TaqI | TCGA | 2 cut(s) | 124, 254 |
| TasI | AATT | 5 cut(s) | 299, 319, 393, 457, 535 |
| TatI | WGTACW | 1 cut(s) | 363 |
| TfiI | GAWTC | 2 cut(s) | 229, 601 |
| Tru1I | TTAA | 2 cut(s) | 303, 534 |
| Tru9I | TTAA | 2 cut(s) | 303, 534 |
| TscAI | CASTG | 1 cut(s) | 469 |
| TseFI | GTSAC | 1 cut(s) | 485 |
| Tsp45I | GTSAC | 1 cut(s) | 485 |
| TspDTI | ATGAA | 2 cut(s) | 311, 384 |
| TspRI | CASTG | 1 cut(s) | 469 |
| VspI | ATTAAT | 1 cut(s) | 534 |
| XapI | RAATTY | 1 cut(s) | 299 |
| XceI | RCATGY | 1 cut(s) | 201 |
| XmiI | GTMKAC | 1 cut(s) | 342 |
| XmnI | GAANNNNTTC | 1 cut(s) | 352 |
| XspI | CTAG | 2 cut(s) | 269, 390 |
| ZrmI | AGTACT | 1 cut(s) | 365 |
| Zsp2I | ATGCAT | 1 cut(s) | 482 |