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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G44716 AT3G44716 |
| malus_domestica | MD03G1135900.v1.1 MD11G1158400.v1.1 |
| prunus_persica | Prupe.6G120200_v2.0.a1 |
| pyrus_communis | pycom03g09180 pycom11g12900 |
| rosa_chinensis | RchiOBHm_Chr5g0054991 |
| rosa_laevigata | RLG00000034954 |
| rosa_multiflora | Rmu_sc0003653.1_g000025 Rmu_sc0004354.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00025520 |
| rosa_rugosa | Rorug05G0289700 |
| rosa_samantha | Rh5AG359800 Rh5BG370800 Rh5CG393100 Rh5DG384600 |
| rosa_wichuraiana | Rw5G033850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 693 |
| AccI | GTMKAC | 1 cut(s) | 486 |
| AclWI | GGATC | 3 cut(s) | 264, 666, 679 |
| AcsI | RAATTY | 1 cut(s) | 443 |
| AcuI | CTGAAG | 2 cut(s) | 483, 511 |
| AfaI | GTAC | 1 cut(s) | 509 |
| AgsI | TTSAA | 8 cut(s) | 13, 90, 369, 377, 386, 463, 548, 663 |
| AleI | CACNNNNGTG | 1 cut(s) | 180 |
| AluBI | AGCT | 5 cut(s) | 254, 303, 362, 416, 433 |
| AluI | AGCT | 5 cut(s) | 254, 303, 362, 416, 433 |
| Alw26I | GTCTC | 1 cut(s) | 428 |
| AlwI | GGATC | 3 cut(s) | 264, 666, 679 |
| ApoI | RAATTY | 1 cut(s) | 443 |
| AseI | ATTAAT | 1 cut(s) | 678 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 496 |
| AsuHPI | GGTGA | 4 cut(s) | 190, 312, 515, 623 |
| BamHI | GGATCC | 1 cut(s) | 671 |
| BbsI | GAAGAC | 1 cut(s) | 198 |
| BccI | CCATC | 1 cut(s) | 413 |
| BclI | TGATCA | 1 cut(s) | 147 |
| BcoDI | GTCTC | 1 cut(s) | 428 |
| BfaI | CTAG | 2 cut(s) | 413, 534 |
| BfmI | CTRYAG | 1 cut(s) | 487 |
| BmcAI | AGTACT | 1 cut(s) | 509 |
| BmiI | GGNNCC | 1 cut(s) | 673 |
| BmrI | ACTGGG | 1 cut(s) | 196 |
| BmsI | GCATC | 2 cut(s) | 323, 611 |
| BmuI | ACTGGG | 1 cut(s) | 196 |
| BpiI | GAAGAC | 1 cut(s) | 198 |
| BpmI | CTGGAG | 1 cut(s) | 378 |
| BpuEI | CTTGAG | 1 cut(s) | 283 |
| BsaI | GGTCTC | 1 cut(s) | 428 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 218, 248 |
| Bse1I | ACTGG | 1 cut(s) | 202 |
| Bse3DI | GCAATG | 1 cut(s) | 583 |
| BseMI | GCAATG | 1 cut(s) | 583 |
| BseMII | CTCAG | 1 cut(s) | 264 |
| BseNI | ACTGG | 1 cut(s) | 202 |
| BsmAI | GTCTC | 1 cut(s) | 428 |
| Bso31I | GGTCTC | 1 cut(s) | 428 |
| Bsp143I | GATC | 3 cut(s) | 147, 269, 671 |
| BspCNI | CTCAG | 1 cut(s) | 263 |
| BspLI | GGNNCC | 1 cut(s) | 673 |
| BspPI | GGATC | 3 cut(s) | 264, 666, 679 |
| BspTNI | GGTCTC | 1 cut(s) | 428 |
| BsrDI | GCAATG | 1 cut(s) | 583 |
| BsrI | ACTGG | 1 cut(s) | 202 |
| BssMI | GATC | 3 cut(s) | 147, 269, 671 |
| Bst4CI | ACNGT | 2 cut(s) | 608, 733 |
| BstDEI | CTNAG | 1 cut(s) | 250 |
| BstKTI | GATC | 3 cut(s) | 150, 272, 674 |
| BstMAI | GTCTC | 1 cut(s) | 428 |
| BstMBI | GATC | 3 cut(s) | 147, 269, 671 |
| BstNSI | RCATGY | 1 cut(s) | 345 |
| BstSFI | CTRYAG | 1 cut(s) | 487 |
| BstV2I | GAAGAC | 1 cut(s) | 198 |
| BstX2I | RGATCY | 1 cut(s) | 671 |
| BstYI | RGATCY | 1 cut(s) | 671 |
| BtsIMutI | CAGTG | 1 cut(s) | 613 |
| Csp6I | GTAC | 1 cut(s) | 508 |
| CviAII | CATG | 4 cut(s) | 342, 439, 471, 521 |
| CviJI | RGCY | 6 cut(s) | 254, 303, 362, 416, 433, 593 |
| CviKI_1 | RGCY | 6 cut(s) | 254, 303, 362, 416, 433, 593 |
| CviQI | GTAC | 1 cut(s) | 508 |
| DdeI | CTNAG | 1 cut(s) | 250 |
| DpnI | GATC | 3 cut(s) | 149, 271, 673 |
| DpnII | GATC | 3 cut(s) | 147, 269, 671 |
| Eco31I | GGTCTC | 1 cut(s) | 428 |
| Eco57I | CTGAAG | 2 cut(s) | 483, 511 |
| EcoT22I | ATGCAT | 1 cut(s) | 626 |
| FaeI | CATG | 4 cut(s) | 345, 442, 474, 524 |
| FatI | CATG | 4 cut(s) | 341, 438, 470, 520 |
| FauNDI | CATATG | 2 cut(s) | 152, 626 |
| FbaI | TGATCA | 1 cut(s) | 147 |
| FblI | GTMKAC | 1 cut(s) | 486 |
| FspBI | CTAG | 2 cut(s) | 413, 534 |
| GsuI | CTGGAG | 1 cut(s) | 378 |
| Hin1II | CATG | 4 cut(s) | 345, 442, 474, 524 |
| HincII | GTYRAC | 1 cut(s) | 63 |
| HindII | GTYRAC | 1 cut(s) | 63 |
| HindIII | AAGCTT | 1 cut(s) | 431 |
| HinfI | GANTC | 5 cut(s) | 9, 86, 373, 483, 745 |
| HphI | GGTGA | 4 cut(s) | 190, 312, 515, 623 |
| Hpy166II | GTNNAC | 3 cut(s) | 63, 410, 487 |
| Hpy188I | TCNGA | 2 cut(s) | 103, 192 |
| Hpy188III | TCNNGA | 5 cut(s) | 13, 133, 357, 377, 529 |
| Hpy8I | GTNNAC | 3 cut(s) | 63, 410, 487 |
| HpyAV | CCTTC | 2 cut(s) | 254, 380 |
| HpyCH4III | ACNGT | 2 cut(s) | 608, 733 |
| HpyCH4V | TGCA | 4 cut(s) | 156, 314, 576, 624 |
| HpyF3I | CTNAG | 1 cut(s) | 250 |
| Hsp92II | CATG | 4 cut(s) | 345, 442, 474, 524 |
| Ksp22I | TGATCA | 1 cut(s) | 147 |
| Kzo9I | GATC | 3 cut(s) | 147, 269, 671 |
| LmnI | GCTCC | 1 cut(s) | 359 |
| LpnPI | CCDG | 7 cut(s) | 155, 215, 240, 342, 486, 514, 567 |
| LweI | GCATC | 2 cut(s) | 323, 611 |
| MaeI | CTAG | 2 cut(s) | 413, 534 |
| MaeIII | GTNAC | 3 cut(s) | 455, 629, 727 |
| MalI | GATC | 3 cut(s) | 149, 271, 673 |
| MboI | GATC | 3 cut(s) | 147, 269, 671 |
| MboII | GAAGA | 7 cut(s) | 198, 207, 210, 357, 387, 489, 527 |
| MflI | RGATCY | 1 cut(s) | 671 |
| MluCI | AATT | 6 cut(s) | 52, 443, 463, 537, 601, 679 |
| MlyI | GAGTC | 1 cut(s) | 492 |
| MmeI | TCCRAC | 1 cut(s) | 297 |
| MnlI | CCTC | 2 cut(s) | 244, 726 |
| Mph1103I | ATGCAT | 1 cut(s) | 626 |
| MroXI | GAANNNNTTC | 1 cut(s) | 496 |
| MseI | TTAA | 2 cut(s) | 447, 678 |
| MslI | CAYNNNNRTG | 2 cut(s) | 180, 619 |
| MspA1I | CMGCKG | 1 cut(s) | 254 |
| NdeI | CATATG | 2 cut(s) | 152, 626 |
| NdeII | GATC | 3 cut(s) | 147, 269, 671 |
| NlaIII | CATG | 4 cut(s) | 345, 442, 474, 524 |
| NlaIV | GGNNCC | 1 cut(s) | 673 |
| NmuCI | GTSAC | 3 cut(s) | 455, 629, 727 |
| NsiI | ATGCAT | 1 cut(s) | 626 |
| NspI | RCATGY | 1 cut(s) | 345 |
| OliI | CACNNNNGTG | 1 cut(s) | 180 |
| PdmI | GAANNNNTTC | 1 cut(s) | 496 |
| PfeI | GAWTC | 4 cut(s) | 9, 86, 373, 745 |
| PleI | GAGTC | 1 cut(s) | 491 |
| PpsI | GAGTC | 1 cut(s) | 491 |
| PshBI | ATTAAT | 1 cut(s) | 678 |
| PsiI | TTATAA | 1 cut(s) | 693 |
| PspN4I | GGNNCC | 1 cut(s) | 673 |
| PsuI | RGATCY | 1 cut(s) | 671 |
| PvuII | CAGCTG | 1 cut(s) | 254 |
| RsaI | GTAC | 1 cut(s) | 509 |
| RsaNI | GTAC | 1 cut(s) | 508 |
| RseI | CAYNNNNRTG | 2 cut(s) | 180, 619 |
| SaqAI | TTAA | 2 cut(s) | 447, 678 |
| Sau3AI | GATC | 3 cut(s) | 147, 269, 671 |
| ScaI | AGTACT | 1 cut(s) | 509 |
| SchI | GAGTC | 1 cut(s) | 492 |
| SetI | ASST | 9 cut(s) | 29, 246, 256, 305, 364, 418, 435, 505, 657 |
| SfaNI | GCATC | 2 cut(s) | 323, 611 |
| SfcI | CTRYAG | 1 cut(s) | 487 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 180, 619 |
| SmlI | CTYRAG | 1 cut(s) | 298 |
| SmoI | CTYRAG | 1 cut(s) | 298 |
| Sse9I | AATT | 6 cut(s) | 52, 443, 463, 537, 601, 679 |
| SspMI | CTAG | 2 cut(s) | 413, 534 |
| TaaI | ACNGT | 2 cut(s) | 608, 733 |
| TaqI | TCGA | 3 cut(s) | 71, 268, 398 |
| TasI | AATT | 6 cut(s) | 52, 443, 463, 537, 601, 679 |
| TatI | WGTACW | 1 cut(s) | 507 |
| TfiI | GAWTC | 4 cut(s) | 9, 86, 373, 745 |
| Tru1I | TTAA | 2 cut(s) | 447, 678 |
| Tru9I | TTAA | 2 cut(s) | 447, 678 |
| TscAI | CASTG | 1 cut(s) | 613 |
| TseFI | GTSAC | 3 cut(s) | 455, 629, 727 |
| Tsp45I | GTSAC | 3 cut(s) | 455, 629, 727 |
| TspDTI | ATGAA | 2 cut(s) | 120, 528 |
| TspRI | CASTG | 1 cut(s) | 613 |
| VspI | ATTAAT | 1 cut(s) | 678 |
| XapI | RAATTY | 1 cut(s) | 443 |
| XceI | RCATGY | 1 cut(s) | 345 |
| XmiI | GTMKAC | 1 cut(s) | 486 |
| XmnI | GAANNNNTTC | 1 cut(s) | 496 |
| XspI | CTAG | 2 cut(s) | 413, 534 |
| ZrmI | AGTACT | 1 cut(s) | 509 |
| Zsp2I | ATGCAT | 1 cut(s) | 626 |