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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G44716 AT3G44716 |
| malus_domestica | MD03G1135900.v1.1 MD11G1158400.v1.1 |
| prunus_persica | Prupe.6G120200_v2.0.a1 |
| pyrus_communis | pycom03g09180 pycom11g12900 |
| rosa_chinensis | RchiOBHm_Chr5g0054991 |
| rosa_laevigata | RLG00000034954 |
| rosa_multiflora | Rmu_sc0003653.1_g000025 Rmu_sc0004354.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00025520 |
| rosa_rugosa | Rorug05G0289700 |
| rosa_samantha | Rh5AG359800 Rh5BG370800 Rh5CG393100 Rh5DG384600 |
| rosa_wichuraiana | Rw5G033850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 410 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 604 |
| Acc36I | ACCTGC | 1 cut(s) | 410 |
| AciI | CCGC | 2 cut(s) | 140, 148 |
| AclWI | GGATC | 3 cut(s) | 297, 732, 745 |
| AcsI | RAATTY | 1 cut(s) | 121 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 294, 569 |
| AgsI | TTSAA | 8 cut(s) | 13, 72, 126, 392, 429, 437, 595, 729 |
| AhlI | ACTAGT | 1 cut(s) | 478 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 301, 333 |
| AluBI | AGCT | 2 cut(s) | 422, 499 |
| AluI | AGCT | 2 cut(s) | 422, 499 |
| AlwI | GGATC | 3 cut(s) | 297, 732, 745 |
| ApoI | RAATTY | 1 cut(s) | 121 |
| AspA2I | CCTAGG | 1 cut(s) | 293 |
| AsuHPI | GGTGA | 2 cut(s) | 391, 736 |
| AsuII | TTCGAA | 1 cut(s) | 113 |
| AvrII | CCTAGG | 1 cut(s) | 293 |
| BamHI | GGATCC | 1 cut(s) | 737 |
| BbsI | GAAGAC | 1 cut(s) | 602 |
| BccI | CCATC | 5 cut(s) | 297, 385, 446, 749, 787 |
| BciVI | GTATCC | 1 cut(s) | 578 |
| BclI | TGATCA | 1 cut(s) | 246 |
| BcuI | ACTAGT | 1 cut(s) | 478 |
| BfaI | CTAG | 5 cut(s) | 44, 294, 479, 500, 782 |
| BfmI | CTRYAG | 1 cut(s) | 229 |
| BfuAI | ACCTGC | 1 cut(s) | 410 |
| BfuI | GTATCC | 1 cut(s) | 578 |
| BglII | AGATCT | 1 cut(s) | 523 |
| BlnI | CCTAGG | 1 cut(s) | 293 |
| BmiI | GGNNCC | 1 cut(s) | 739 |
| BmsI | GCATC | 1 cut(s) | 40 |
| BoxI | GACNNNNGTC | 1 cut(s) | 648 |
| BpiI | GAAGAC | 1 cut(s) | 602 |
| Bpu14I | TTCGAA | 1 cut(s) | 113 |
| BsaJI | CCNNGG | 1 cut(s) | 293 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 294, 569 |
| Bse1I | ACTGG | 1 cut(s) | 747 |
| BseDI | CCNNGG | 1 cut(s) | 293 |
| BseGI | GGATG | 5 cut(s) | 31, 289, 514, 609, 615 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 294, 569 |
| BseNI | ACTGG | 1 cut(s) | 747 |
| BseYI | CCCAGC | 1 cut(s) | 677 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 294, 569 |
| Bsp119I | TTCGAA | 1 cut(s) | 113 |
| Bsp143I | GATC | 6 cut(s) | 246, 302, 487, 523, 737, 802 |
| BspACI | CCGC | 2 cut(s) | 140, 148 |
| BspHI | TCATGA | 1 cut(s) | 484 |
| BspLI | GGNNCC | 1 cut(s) | 739 |
| BspMI | ACCTGC | 1 cut(s) | 410 |
| BspPI | GGATC | 3 cut(s) | 297, 732, 745 |
| BspT104I | TTCGAA | 1 cut(s) | 113 |
| BsrI | ACTGG | 1 cut(s) | 747 |
| BssECI | CCNNGG | 1 cut(s) | 293 |
| BssMI | GATC | 6 cut(s) | 246, 302, 487, 523, 737, 802 |
| BssT1I | CCWWGG | 1 cut(s) | 293 |
| Bst4CI | ACNGT | 2 cut(s) | 185, 330 |
| Bst6I | CTCTTC | 1 cut(s) | 770 |
| BstBI | TTCGAA | 1 cut(s) | 113 |
| BstC8I | GCNNGC | 2 cut(s) | 407, 411 |
| BstF5I | GGATG | 5 cut(s) | 31, 289, 514, 609, 615 |
| BstKTI | GATC | 6 cut(s) | 249, 305, 490, 526, 740, 805 |
| BstMBI | GATC | 6 cut(s) | 246, 302, 487, 523, 737, 802 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 380, 419 |
| BstNSI | RCATGY | 2 cut(s) | 413, 417 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 648 |
| BstSFI | CTRYAG | 1 cut(s) | 229 |
| BstV2I | GAAGAC | 1 cut(s) | 602 |
| BstX2I | RGATCY | 2 cut(s) | 523, 737 |
| BstYI | RGATCY | 2 cut(s) | 523, 737 |
| BsuI | GTATCC | 1 cut(s) | 578 |
| BtsCI | GGATG | 5 cut(s) | 31, 289, 514, 609, 615 |
| BtsIMutI | CAGTG | 2 cut(s) | 190, 805 |
| BveI | ACCTGC | 1 cut(s) | 410 |
| Cac8I | GCNNGC | 2 cut(s) | 407, 411 |
| CciI | TCATGA | 1 cut(s) | 484 |
| CviAII | CATG | 6 cut(s) | 410, 414, 485, 505, 537, 569 |
| CviJI | RGCY | 5 cut(s) | 298, 422, 457, 499, 658 |
| CviKI_1 | RGCY | 5 cut(s) | 298, 422, 457, 499, 658 |
| DpnI | GATC | 6 cut(s) | 248, 304, 489, 525, 739, 804 |
| DpnII | GATC | 6 cut(s) | 246, 302, 487, 523, 737, 802 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 604 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 604 |
| Eam1104I | CTCTTC | 1 cut(s) | 770 |
| EarI | CTCTTC | 1 cut(s) | 770 |
| Eco130I | CCWWGG | 1 cut(s) | 293 |
| EcoT14I | CCWWGG | 1 cut(s) | 293 |
| EcoT22I | ATGCAT | 1 cut(s) | 415 |
| ErhI | CCWWGG | 1 cut(s) | 293 |
| FaeI | CATG | 6 cut(s) | 413, 417, 488, 508, 540, 572 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 592, 624 |
| FatI | CATG | 6 cut(s) | 409, 413, 484, 504, 536, 568 |
| FbaI | TGATCA | 1 cut(s) | 246 |
| FokI | GGATG | 5 cut(s) | 18, 276, 501, 602, 616 |
| FspBI | CTAG | 5 cut(s) | 44, 294, 479, 500, 782 |
| GsaI | CCCAGC | 1 cut(s) | 681 |
| Hin1II | CATG | 6 cut(s) | 413, 417, 488, 508, 540, 572 |
| HincII | GTYRAC | 1 cut(s) | 63 |
| HindII | GTYRAC | 1 cut(s) | 63 |
| HindIII | AAGCTT | 1 cut(s) | 420 |
| HinfI | GANTC | 1 cut(s) | 433 |
| HpaI | GTTAAC | 1 cut(s) | 63 |
| HphI | GGTGA | 2 cut(s) | 391, 736 |
| Hpy166II | GTNNAC | 1 cut(s) | 63 |
| Hpy188I | TCNGA | 2 cut(s) | 246, 528 |
| Hpy188III | TCNNGA | 3 cut(s) | 13, 437, 485 |
| Hpy8I | GTNNAC | 1 cut(s) | 63 |
| Hpy99I | CGWCG | 1 cut(s) | 647 |
| HpyAV | CCTTC | 4 cut(s) | 50, 270, 573, 575 |
| HpyCH4III | ACNGT | 2 cut(s) | 185, 330 |
| HpyCH4IV | ACGT | 1 cut(s) | 627 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 31, 162, 409, 413, 711 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 380, 419 |
| HpySE526I | ACGT | 1 cut(s) | 627 |
| Hsp92II | CATG | 6 cut(s) | 413, 417, 488, 508, 540, 572 |
| Ksp22I | TGATCA | 1 cut(s) | 246 |
| KspAI | GTTAAC | 1 cut(s) | 63 |
| Kzo9I | GATC | 6 cut(s) | 246, 302, 487, 523, 737, 802 |
| LmnI | GCTCC | 1 cut(s) | 379 |
| LweI | GCATC | 1 cut(s) | 40 |
| MaeI | CTAG | 5 cut(s) | 44, 294, 479, 500, 782 |
| MaeII | ACGT | 1 cut(s) | 627 |
| MaeIII | GTNAC | 3 cut(s) | 83, 397, 539 |
| MalI | GATC | 6 cut(s) | 248, 304, 489, 525, 739, 804 |
| MboI | GATC | 6 cut(s) | 246, 302, 487, 523, 737, 802 |
| MboII | GAAGA | 3 cut(s) | 417, 607, 757 |
| MflI | RGATCY | 2 cut(s) | 523, 737 |
| MluCI | AATT | 4 cut(s) | 121, 213, 529, 667 |
| MmeI | TCCRAC | 2 cut(s) | 279, 357 |
| MnlI | CCTC | 5 cut(s) | 35, 205, 478, 678, 773 |
| Mph1103I | ATGCAT | 1 cut(s) | 415 |
| MseI | TTAA | 2 cut(s) | 62, 201 |
| MslI | CAYNNNNRTG | 1 cut(s) | 414 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 380, 419 |
| NdeII | GATC | 6 cut(s) | 246, 302, 487, 523, 737, 802 |
| NlaIII | CATG | 6 cut(s) | 413, 417, 488, 508, 540, 572 |
| NlaIV | GGNNCC | 1 cut(s) | 739 |
| NmuCI | GTSAC | 2 cut(s) | 83, 397 |
| NsiI | ATGCAT | 1 cut(s) | 415 |
| NspI | RCATGY | 2 cut(s) | 413, 417 |
| NspV | TTCGAA | 1 cut(s) | 113 |
| PaeI | GCATGC | 1 cut(s) | 413 |
| PagI | TCATGA | 1 cut(s) | 484 |
| PaqCI | CACCTGC | 1 cut(s) | 410 |
| PfeI | GAWTC | 1 cut(s) | 433 |
| PshAI | GACNNNNGTC | 1 cut(s) | 648 |
| PspFI | CCCAGC | 1 cut(s) | 677 |
| PspN4I | GGNNCC | 1 cut(s) | 739 |
| PsuI | RGATCY | 2 cut(s) | 523, 737 |
| RseI | CAYNNNNRTG | 1 cut(s) | 414 |
| SaqAI | TTAA | 2 cut(s) | 62, 201 |
| Sau3AI | GATC | 6 cut(s) | 246, 302, 487, 523, 737, 802 |
| SfaNI | GCATC | 1 cut(s) | 40 |
| SfcI | CTRYAG | 1 cut(s) | 229 |
| SfuI | TTCGAA | 1 cut(s) | 113 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 414 |
| SpeI | ACTAGT | 1 cut(s) | 478 |
| SphI | GCATGC | 1 cut(s) | 413 |
| Sse9I | AATT | 4 cut(s) | 121, 213, 529, 667 |
| SsiI | CCGC | 2 cut(s) | 140, 148 |
| SspMI | CTAG | 5 cut(s) | 44, 294, 479, 500, 782 |
| StyI | CCWWGG | 1 cut(s) | 293 |
| TaaI | ACNGT | 2 cut(s) | 185, 330 |
| TaiI | ACGT | 1 cut(s) | 630 |
| TaqI | TCGA | 3 cut(s) | 113, 301, 612 |
| TasI | AATT | 4 cut(s) | 121, 213, 529, 667 |
| TfiI | GAWTC | 1 cut(s) | 433 |
| Tru1I | TTAA | 2 cut(s) | 62, 201 |
| Tru9I | TTAA | 2 cut(s) | 62, 201 |
| TscAI | CASTG | 1 cut(s) | 190 |
| TseFI | GTSAC | 2 cut(s) | 83, 397 |
| Tsp45I | GTSAC | 2 cut(s) | 83, 397 |
| TspDTI | ATGAA | 5 cut(s) | 258, 473, 503, 570, 594 |
| TspRI | CASTG | 1 cut(s) | 190 |
| XapI | RAATTY | 1 cut(s) | 121 |
| XceI | RCATGY | 2 cut(s) | 413, 417 |
| XmaJI | CCTAGG | 1 cut(s) | 293 |
| XspI | CTAG | 5 cut(s) | 44, 294, 479, 500, 782 |
| Zsp2I | ATGCAT | 1 cut(s) | 415 |