Photosystem II 5 kDa protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51400 AT3G21055 AT3G21055 |
| fragaria_vesca | FvH4_3g28710 |
| malus_domestica | MD03G1173700.v1.1 MD11G1191900.v1.1 |
| prunus_persica | Prupe.4G250700_v2.0.a1 |
| pyrus_communis | pycom03g13130 |
| rosa_chinensis | RchiOBHm_Chr5g0052351 |
| rosa_laevigata | RLG00000034822 |
| rosa_multiflora | Rmu_sc0031963.1_g000001 |
| rosa_rugosa | Rorug05G0272600 |
| rosa_samantha | Rh5AG345100 Rh5BG356200 Rh5CG381500 Rh5DG371200 |
| rosa_wichuraiana | Rw5G032570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 7 cut(s) | 24, 82, 108, 185, 191, 197, 230 |
| AcoI | YGGCCR | 2 cut(s) | 99, 201 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 84, 97, 126, 245 |
| AgsI | TTSAA | 1 cut(s) | 72 |
| AluBI | AGCT | 1 cut(s) | 207 |
| AluI | AGCT | 1 cut(s) | 207 |
| AoxI | GGCC | 3 cut(s) | 99, 105, 201 |
| ApeKI | GCWGC | 5 cut(s) | 110, 150, 188, 194, 221 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 164, 196 |
| AspS9I | GGNCC | 1 cut(s) | 249 |
| AsuHPI | GGTGA | 1 cut(s) | 280 |
| AvaII | GGWCC | 1 cut(s) | 249 |
| BalI | TGGCCA | 2 cut(s) | 101, 203 |
| BbvI | GCAGC | 5 cut(s) | 122, 162, 175, 181, 208 |
| BccI | CCATC | 1 cut(s) | 65 |
| BfmI | CTRYAG | 1 cut(s) | 39 |
| BlpI | GCTNAGC | 1 cut(s) | 46 |
| Bme18I | GGWCC | 1 cut(s) | 249 |
| BmgT120I | GGNCC | 1 cut(s) | 249 |
| BmiI | GGNNCC | 2 cut(s) | 89, 250 |
| BmsI | GCATC | 1 cut(s) | 14 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 46 |
| BsaJI | CCNNGG | 4 cut(s) | 102, 216, 225, 261 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 84, 97, 126, 245 |
| BseDI | CCNNGG | 4 cut(s) | 102, 216, 225, 261 |
| BseGI | GGATG | 2 cut(s) | 5, 238 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 84, 97, 126, 245 |
| BseMII | CTCAG | 2 cut(s) | 60, 135 |
| BseXI | GCAGC | 5 cut(s) | 122, 162, 175, 181, 208 |
| BseYI | CCCAGC | 1 cut(s) | 77 |
| BshFI | GGCC | 3 cut(s) | 101, 107, 203 |
| BsiSI | CCGG | 1 cut(s) | 85 |
| BslFI | GGGAC | 2 cut(s) | 185, 262 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 84, 97, 126, 245 |
| BsmFI | GGGAC | 2 cut(s) | 185, 262 |
| BsnI | GGCC | 3 cut(s) | 101, 107, 203 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 46 |
| BspACI | CCGC | 7 cut(s) | 24, 82, 108, 185, 191, 197, 230 |
| BspANI | GGCC | 3 cut(s) | 101, 107, 203 |
| BspCNI | CTCAG | 2 cut(s) | 59, 134 |
| BspLI | GGNNCC | 2 cut(s) | 89, 250 |
| BspMAI | CTGCAG | 1 cut(s) | 43 |
| BssECI | CCNNGG | 4 cut(s) | 102, 216, 225, 261 |
| BssT1I | CCWWGG | 4 cut(s) | 102, 216, 225, 261 |
| BstC8I | GCNNGC | 2 cut(s) | 43, 205 |
| BstDEI | CTNAG | 2 cut(s) | 46, 121 |
| BstF5I | GGATG | 2 cut(s) | 5, 238 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 47, 87, 107, 156, 191, 194, 200, 221, 227 |
| BstSFI | CTRYAG | 1 cut(s) | 39 |
| BstV1I | GCAGC | 5 cut(s) | 122, 162, 175, 181, 208 |
| BsuRI | GGCC | 3 cut(s) | 101, 107, 203 |
| BtgZI | GCGATG | 1 cut(s) | 43 |
| BtsCI | GGATG | 2 cut(s) | 5, 238 |
| BtsI | GCAGTG | 1 cut(s) | 166 |
| BtsIMutI | CAGTG | 1 cut(s) | 166 |
| Cac8I | GCNNGC | 2 cut(s) | 43, 205 |
| Cfr13I | GGNCC | 1 cut(s) | 249 |
| CseI | GACGC | 1 cut(s) | 274 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 142, 177 |
| CviAII | CATG | 3 cut(s) | 10, 16, 292 |
| DdeI | CTNAG | 2 cut(s) | 46, 121 |
| EaeI | YGGCCR | 2 cut(s) | 99, 201 |
| EciI | GGCGGA | 1 cut(s) | 245 |
| Eco130I | CCWWGG | 4 cut(s) | 102, 216, 225, 261 |
| Eco47I | GGWCC | 1 cut(s) | 249 |
| EcoT14I | CCWWGG | 4 cut(s) | 102, 216, 225, 261 |
| ErhI | CCWWGG | 4 cut(s) | 102, 216, 225, 261 |
| FaeI | CATG | 3 cut(s) | 13, 19, 295 |
| FaiI | YATR | 4 cut(s) | 11, 17, 273, 293 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 209, 241 |
| FaqI | GGGAC | 2 cut(s) | 185, 262 |
| FatI | CATG | 3 cut(s) | 9, 15, 291 |
| FokI | GGATG | 1 cut(s) | 245 |
| GsaI | CCCAGC | 1 cut(s) | 81 |
| HaeIII | GGCC | 3 cut(s) | 101, 107, 203 |
| HapII | CCGG | 1 cut(s) | 85 |
| HgaI | GACGC | 1 cut(s) | 274 |
| Hin1II | CATG | 3 cut(s) | 13, 19, 295 |
| HpaII | CCGG | 1 cut(s) | 85 |
| HphI | GGTGA | 1 cut(s) | 280 |
| Hpy188I | TCNGA | 1 cut(s) | 124 |
| Hpy188III | TCNNGA | 1 cut(s) | 34 |
| Hpy99I | CGWCG | 1 cut(s) | 98 |
| HpyAV | CCTTC | 4 cut(s) | 78, 133, 137, 159 |
| HpyCH4V | TGCA | 1 cut(s) | 41 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 47, 87, 107, 156, 191, 194, 200, 221, 227 |
| HpyF3I | CTNAG | 2 cut(s) | 46, 121 |
| Hsp92II | CATG | 3 cut(s) | 13, 19, 295 |
| LmnI | GCTCC | 3 cut(s) | 87, 147, 280 |
| LpnPI | CCDG | 7 cut(s) | 27, 47, 91, 98, 127, 217, 291 |
| Lsp1109I | GCAGC | 5 cut(s) | 122, 162, 175, 181, 208 |
| LweI | GCATC | 1 cut(s) | 14 |
| MaeIII | GTNAC | 1 cut(s) | 286 |
| MlsI | TGGCCA | 2 cut(s) | 101, 203 |
| MluNI | TGGCCA | 2 cut(s) | 101, 203 |
| MnlI | CCTC | 7 cut(s) | 37, 61, 101, 118, 130, 162, 237 |
| Mox20I | TGGCCA | 2 cut(s) | 101, 203 |
| MscI | TGGCCA | 2 cut(s) | 101, 203 |
| MslI | CAYNNNNRTG | 1 cut(s) | 14 |
| Msp20I | TGGCCA | 2 cut(s) | 101, 203 |
| MspI | CCGG | 1 cut(s) | 85 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 47, 87, 107, 156, 191, 194, 200, 221, 227 |
| NlaIII | CATG | 3 cut(s) | 13, 19, 295 |
| NlaIV | GGNNCC | 2 cut(s) | 89, 250 |
| NmuCI | GTSAC | 1 cut(s) | 286 |
| PspFI | CCCAGC | 1 cut(s) | 77 |
| PspN4I | GGNNCC | 2 cut(s) | 89, 250 |
| PspPI | GGNCC | 1 cut(s) | 249 |
| PstI | CTGCAG | 1 cut(s) | 43 |
| RseI | CAYNNNNRTG | 1 cut(s) | 14 |
| Sau96I | GGNCC | 1 cut(s) | 249 |
| SetI | ASST | 3 cut(s) | 70, 122, 209 |
| SfaNI | GCATC | 1 cut(s) | 14 |
| SfcI | CTRYAG | 1 cut(s) | 39 |
| SinI | GGWCC | 1 cut(s) | 249 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 14 |
| SsiI | CCGC | 7 cut(s) | 24, 82, 108, 185, 191, 197, 230 |
| StyI | CCWWGG | 4 cut(s) | 102, 216, 225, 261 |
| TauI | GCSGC | 5 cut(s) | 26, 84, 110, 188, 194 |
| TscAI | CASTG | 1 cut(s) | 166 |
| TseFI | GTSAC | 1 cut(s) | 286 |
| TseI | GCWGC | 5 cut(s) | 110, 150, 188, 194, 221 |
| Tsp45I | GTSAC | 1 cut(s) | 286 |
| TspRI | CASTG | 1 cut(s) | 166 |
| VpaK11BI | GGWCC | 1 cut(s) | 249 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 223 |