Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0014342

Physical Location & Seq

Genomic Coordinates Forward (+)

24545328 .. 24547337

Gene Structure 2010 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1178400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGTTTAAGCTTGTTGGTAATTTTTGGTGTGAAGTTTCAACTTCAGTTCCAAATCCCCTACAGTGTCCTCTCTTCTCTCTCTTCCACACTCGCTCCCTCTCACCCCACAAAGGCAAACCCACCAGTTGGAACACAACCCACACTTCAGTTCGAACAAACCCACTACTCTCCCTGTTCGAGACATGCAAATCCATGTCCCAGCTGAAGCAAATCCAATCCCAGATGATCCTTACCGGCTTAATCTCCGATGGGTTCGCTTCGAGCCGCGTTATCGCCTTTTGCGCGCTTTCAGAGTCTCGAAATCTTGATTATTGTATCAGGGTTTTATGCAATGTGCATAACCCAAATGCGTTCTCTTGGAATGCGGCCATTAGAGGGTATTCTGAGAGCGAAAATCCGAGGGAAGCGATTGTGTTGTATAAGAAAATGTTGAGGAATGGTGGGTCGAGACCGGATAATTATACTTACCCGTTATTGATGAAAGTTTGTGCTAATTTATCGTTGAGTTTTGTGGGTGGTGAGGTTCTCGGGCATGTGATGCAATTGGGTTTGTATTTGGATATGTTTGTTCACAATGCTGTGATTCATATGCTTGTTTCGTGCAGGGAGTTGGAGGCTGCACATAAGGTGTTTGATGAAAGTTGTGTGAGAGATTTGGTTTCTTGGAATTCTTTGATTAATGGGTATGTCCGATGTGGGTTGGCGTGCGAGGCGTTGAGGATTTATCGGCAAATGGAGGTGGAAGGAGTGGTGCCGGATGAAGTTACAATGATTGGGGTGGTTTCTTCTTGTGCTCAACTTGAAGATTTGAGTCTCGGGAGACAACTTCATTGGTTGATTGAAGAAAATGGACTAAGTTTGACTATTCCTCTTACTAATGTGCTTATGGACATGTATGTGAAGTGTGGGAATCTTGAGGTTGCTCGAGCTTTATTTGACACTATGAAAAAGAAAACTATTGTCTCATGGACTACAATGATATTTGGATATGCCAAATACGGGTTTCTGGAAATTGCTTGCAGGCTTTTGTATGAGATTCCGGAGAAGAATGTCGTGCCATGGAATGCAATGATTAGCGGCTATGTCCAAGCCAAGCATGGAAAAGAAGCTCTGGCTCTGTTTCATGAAATGCAAGCGAGAAATATACTTCCTAATGAAATAACCATGGTTGGCTGCTTATCCGCATGCTCACAAATTGGAGCACTTGAGGTCGGAATATGGATTCACCATTATATTGAGAAACAGGGTCTTTCGTTAAATGTTGCATTGGGGACTGCCCTTGTTGACATGTATGCTAAATGTGGGAACATCACAGAGGCTCTCAAGGTTTTCCGGGACATGCCAGGAAGAAACTCTCTGACTTGGACAGCTATTATTTGTGGTCTTGCCCATAACGGACATGCACATGATGCCATAACTTACTTTGCAGAGATGATCAAAACGGGATTGGAGCCGGACGAGATCACCTTTCTTGGGGTGTTATCAGCTTGTTGTCATGGAGGTTTGGTTGAAGAAGGTCGTAAGTACATTTCGTTAATGAAATCGAAATTCAATCTTTGCCCCAAAGTTAAGCATTACTCTTGCATGGTGGACCTTCTAGGTAGGGCTGGACTTTTGCAAGAAGCAGAACAGCTTATCAATAGCATGCCAATGAAGGCGGATGCTGGGGTCTGGGGTGCATTGTTCTTTGCTTGTTATGTTCATAAAAACGTTTCGATGGGAGAAAGAGCAGCTACCAAGCTTCTTGAGTTGGACCCTGGTGATGGCGGAATTTATATTTTGCTTGGTAAAATATATAGGGAATCACATATGTGGGAAAAAGCAGAGAAGATACAGAATTTGATGAAGGAGCGAGGAGTAGAGAAGAGTCCTGGTTGTAGCTCAATAGAGGTGAATGGCATTGTTCATGAGTTTATAGTCAGAGATAAATCACACCCTCAGTCTAAACATATATATGATTGTTTGATTGAGTTAACAAGACAAATGGACCTTTATTTGCCAAACATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1 DYW_deaminase PPR PPR_2

Protein Analysis

670

Amino Acids

74.81

Weight (kDa)

6.9

Isoelectric Point (pI)

38.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	115 - 165	1.4e-09	PPR repeat family
PPR_2	PF13041	218 - 265	1.8e-09	PPR repeat family
PPR	PF01535	220 - 250	4.5e-06	PPR repeat
PPR_2	PF13041	349 - 397	8.6e-12	PPR repeat family
PPR	PF01535	353 - 382	2.3e-07	PPR repeat
PPR_2	PF13041	451 - 499	1.4e-10	PPR repeat family
E_motif	PF20431	568 - 630	1.5e-17	E motif
Eplus_motif	PF20430	635 - 662	2.3e-09	E+ motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014342)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22410
fragaria_vesca	FvH4_3g29070
malus_domestica	MD03G1178400.v1.1
prunus_persica	Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0051471
rosa_laevigata	RLG00000034874
rosa_multiflora	Rmu_sc0023383.1_g000001
rosa_roxburghii	Rroxscaffold_1G00027080
rosa_rugosa	Rorug05G0279100
rosa_samantha	Rh5CG387100
rosa_wichuraiana	Rw5G033140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	751
AccB7I	CCANNNNNTGG	1 cut(s)	126
AccII	CGCG	2 cut(s)	267, 284
AccIII	TCCGGA	1 cut(s)	1039
AciI	CCGC	6 cut(s)	265, 365, 1077, 1182, 1658, 1767
AclI	AACGTT	1 cut(s)	1710
AclWI	GGATC	1 cut(s)	220
AcoI	YGGCCR	1 cut(s)	366
AcsI	RAATTY	4 cut(s)	667, 1547, 1770, 1837
AcuI	CTGAAG	3 cut(s)	27, 129, 224
AfaI	GTAC	1 cut(s)	1526
AfiI	CCNNNNNNNGG	6 cut(s)	110, 126, 375, 999, 1473, 1763
AflIII	ACRYGT	2 cut(s)	891, 1287
AgsI	TTSAA	5 cut(s)	39, 803, 842, 1511, 1552
AjnI	CCWGG	3 cut(s)	1342, 1756, 1870
AleI	CACNNNNGTG	1 cut(s)	1810
Alw21I	GWGCWC	2 cut(s)	796, 1204
Alw26I	GTCTC	6 cut(s)	173, 300, 442, 814, 818, 967
AlwI	GGATC	1 cut(s)	220
Ama87I	CYCGRG	3 cut(s)	527, 815, 924
Aor13HI	TCCGGA	1 cut(s)	1039
AoxI	GGCC	1 cut(s)	366
ApeKI	GCWGC	3 cut(s)	617, 1173, 1730
ApoI	RAATTY	4 cut(s)	667, 1547, 1770, 1837
AseI	ATTAAT	1 cut(s)	678
AspLEI	GCGC	2 cut(s)	284, 286
AspS9I	GGNCC	3 cut(s)	1591, 1753, 1987
AsuC2I	CCSGG	1 cut(s)	1334
AsuHPI	GGTGA	6 cut(s)	93, 530, 1217, 1456, 1772, 1903
AsuII	TTCGAA	1 cut(s)	151
AvaI	CYCGRG	3 cut(s)	527, 815, 924
AvaII	GGWCC	3 cut(s)	1591, 1753, 1987
BanI	GGYRCC	1 cut(s)	751
Bbv12I	GWGCWC	2 cut(s)	796, 1204
BbvI	GCAGC	3 cut(s)	604, 1160, 1742
BccI	CCATC	3 cut(s)	242, 1711, 1757
BciT130I	CCWGG	3 cut(s)	1344, 1758, 1872
BclI	TGATCA	1 cut(s)	1434
BcnI	CCSGG	1 cut(s)	1334
BcoDI	GTCTC	6 cut(s)	173, 300, 442, 814, 818, 967
BfaI	CTAG	1 cut(s)	1598
BfmI	CTRYAG	1 cut(s)	59
BisI	GCNGC	6 cut(s)	265, 366, 618, 1078, 1174, 1731
BlsI	GCNGC	6 cut(s)	266, 367, 619, 1079, 1175, 1732
Bme1390I	CCNGG	4 cut(s)	1334, 1344, 1758, 1872
Bme18I	GGWCC	3 cut(s)	1591, 1753, 1987
BmeT110I	CYCGRG	3 cut(s)	527, 815, 924
BmgT120I	GGNCC	3 cut(s)	1591, 1753, 1987
BmiI	GGNNCC	3 cut(s)	753, 1452, 1755
BmrFI	CCNGG	4 cut(s)	1334, 1344, 1758, 1872
BmsI	GCATC	3 cut(s)	528, 1399, 1651
Bpu14I	TTCGAA	1 cut(s)	151
BpuEI	CTTGAG	4 cut(s)	935, 1226, 1307, 1766
BpuMI	CCSGG	1 cut(s)	1334
BsaI	GGTCTC	1 cut(s)	442
BsaJI	CCNNGG	4 cut(s)	398, 1058, 1164, 1756
BsaWI	WCCGGW	2 cut(s)	451, 1039
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 107, 1491, 1521
Bsc4I	CCNNNNNNNGG	6 cut(s)	110, 126, 375, 999, 1473, 1763
Bse118I	RCCGGY	1 cut(s)	233
Bse1I	ACTGG	1 cut(s)	123
Bse3DI	GCAATG	2 cut(s)	337, 1074
BseAI	TCCGGA	1 cut(s)	1039
BseBI	CCWGG	3 cut(s)	1344, 1758, 1872
BseDI	CCNNGG	4 cut(s)	398, 1058, 1164, 1756
BseGI	GGATG	2 cut(s)	763, 1666
BseLI	CCNNNNNNNGG	6 cut(s)	110, 126, 375, 999, 1473, 1763
BseMI	GCAATG	2 cut(s)	337, 1074
BseMII	CTCAG	2 cut(s)	375, 1952
BseNI	ACTGG	1 cut(s)	123
BsePI	GCGCGC	1 cut(s)	282
BseRI	GAGGAG	1 cut(s)	1869
BseXI	GCAGC	3 cut(s)	604, 1160, 1742
BseYI	CCCAGC	2 cut(s)	198, 1664
BsgI	GTGCAG	2 cut(s)	603, 622
Bsh1236I	CGCG	2 cut(s)	267, 284
BshFI	GGCC	1 cut(s)	368
BshNI	GGYRCC	1 cut(s)	751
BsiHKAI	GWGCWC	2 cut(s)	796, 1204
BsiHKCI	CYCGRG	3 cut(s)	527, 815, 924
BsiSI	CCGG	6 cut(s)	234, 452, 755, 1040, 1333, 1454
BslFI	GGGAC	3 cut(s)	181, 1285, 1349
BslI	CCNNNNNNNGG	6 cut(s)	110, 126, 375, 999, 1473, 1763
BsmAI	GTCTC	6 cut(s)	173, 300, 442, 814, 818, 967
BsmFI	GGGAC	3 cut(s)	181, 1285, 1349
BsmI	GAATGC	2 cut(s)	367, 1069
BsnI	GGCC	1 cut(s)	368
Bso31I	GGTCTC	1 cut(s)	442
BsoBI	CYCGRG	3 cut(s)	527, 815, 924
Bsp119I	TTCGAA	1 cut(s)	151
Bsp1286I	GDGCHC	2 cut(s)	796, 1204
Bsp13I	TCCGGA	1 cut(s)	1039
Bsp143I	GATC	3 cut(s)	225, 1434, 1461
Bsp19I	CCATGG	2 cut(s)	1058, 1164
BspACI	CCGC	6 cut(s)	265, 365, 1077, 1182, 1658, 1767
BspANI	GGCC	1 cut(s)	368
BspCNI	CTCAG	2 cut(s)	376, 1951
BspEI	TCCGGA	1 cut(s)	1039
BspFNI	CGCG	2 cut(s)	267, 284
BspHI	TCATGA	2 cut(s)	1123, 1906
BspLI	GGNNCC	3 cut(s)	753, 1452, 1755
BspPI	GGATC	1 cut(s)	220
BspT104I	TTCGAA	1 cut(s)	151
BspT107I	GGYRCC	1 cut(s)	751
BspTNI	GGTCTC	1 cut(s)	442
BsrDI	GCAATG	2 cut(s)	337, 1074
BsrFI	RCCGGY	1 cut(s)	233
BsrI	ACTGG	1 cut(s)	123
BssAI	RCCGGY	1 cut(s)	233
BssECI	CCNNGG	4 cut(s)	398, 1058, 1164, 1756
BssHII	GCGCGC	1 cut(s)	282
BssMI	GATC	3 cut(s)	225, 1434, 1461
BssT1I	CCWWGG	2 cut(s)	1058, 1164
Bst2UI	CCWGG	3 cut(s)	1344, 1758, 1872
Bst4CI	ACNGT	1 cut(s)	63
Bst6I	CTCTTC	3 cut(s)	77, 86, 1859
BstAPI	GCANNNNNTGC	2 cut(s)	538, 1409
BstBI	TTCGAA	1 cut(s)	151
BstC8I	GCNNGC	7 cut(s)	284, 706, 1018, 1022, 1134, 1186, 1646
BstDEI	CTNAG	3 cut(s)	384, 854, 1938
BstDSI	CCRYGG	2 cut(s)	1058, 1164
BstF5I	GGATG	2 cut(s)	763, 1666
BstFNI	CGCG	2 cut(s)	267, 284
BstHHI	GCGC	2 cut(s)	284, 286
BstKTI	GATC	3 cut(s)	228, 1437, 1464
BstMAI	GTCTC	6 cut(s)	173, 300, 442, 814, 818, 967
BstMBI	GATC	3 cut(s)	225, 1434, 1461
BstMWI	GCNNNNNNNGC	4 cut(s)	281, 538, 710, 1409
BstNI	CCWGG	3 cut(s)	1344, 1758, 1872
BstNSI	RCATGY	8 cut(s)	186, 536, 895, 1188, 1291, 1342, 1403, 1648
BstSCI	CCNGG	4 cut(s)	1332, 1342, 1756, 1870
BstSFI	CTRYAG	1 cut(s)	59
BstUI	CGCG	2 cut(s)	267, 284
BstV1I	GCAGC	3 cut(s)	604, 1160, 1742
BsuRI	GGCC	1 cut(s)	368
BtgI	CCRYGG	2 cut(s)	1058, 1164
BtsCI	GGATG	2 cut(s)	763, 1666
BtsIMutI	CAGTG	1 cut(s)	68
Cac8I	GCNNGC	7 cut(s)	284, 706, 1018, 1022, 1134, 1186, 1646
CciI	TCATGA	2 cut(s)	1123, 1906
CfoI	GCGC	2 cut(s)	284, 286
Cfr10I	RCCGGY	1 cut(s)	233
Cfr13I	GGNCC	3 cut(s)	1591, 1753, 1987
Csp6I	GTAC	1 cut(s)	1525
CviQI	GTAC	1 cut(s)	1525
DdeI	CTNAG	3 cut(s)	384, 854, 1938
DpnI	GATC	3 cut(s)	227, 1436, 1463
DpnII	GATC	3 cut(s)	225, 1434, 1461
EaeI	YGGCCR	1 cut(s)	366
Eam1104I	CTCTTC	3 cut(s)	77, 86, 1859
EarI	CTCTTC	3 cut(s)	77, 86, 1859
EciI	GGCGGA	2 cut(s)	1673, 1782
Eco130I	CCWWGG	2 cut(s)	1058, 1164
Eco31I	GGTCTC	1 cut(s)	442
Eco47I	GGWCC	3 cut(s)	1591, 1753, 1987
Eco57I	CTGAAG	3 cut(s)	27, 129, 224
Eco88I	CYCGRG	3 cut(s)	527, 815, 924
EcoRI	GAATTC	1 cut(s)	667
EcoRII	CCWGG	3 cut(s)	1342, 1756, 1870
EcoT14I	CCWWGG	2 cut(s)	1058, 1164
ErhI	CCWWGG	2 cut(s)	1058, 1164
FaqI	GGGAC	3 cut(s)	181, 1285, 1349
FauNDI	CATATG	2 cut(s)	588, 1809
FbaI	TGATCA	1 cut(s)	1434
Fnu4HI	GCNGC	6 cut(s)	265, 366, 618, 1078, 1174, 1731
FokI	GGATG	2 cut(s)	770, 1673
Fsp4HI	GCNGC	6 cut(s)	265, 366, 618, 1078, 1174, 1731
FspBI	CTAG	1 cut(s)	1598
GlaI	GCGC	2 cut(s)	283, 285
GluI	GCNGC	6 cut(s)	265, 366, 618, 1078, 1174, 1731
GsaI	CCCAGC	2 cut(s)	202, 1668
HaeIII	GGCC	1 cut(s)	368
HapII	CCGG	6 cut(s)	234, 452, 755, 1040, 1333, 1454
HhaI	GCGC	2 cut(s)	284, 286
Hin6I	GCGC	2 cut(s)	282, 284
HinP1I	GCGC	2 cut(s)	282, 284
HincII	GTYRAC	2 cut(s)	1285, 1974
HindII	GTYRAC	2 cut(s)	1285, 1974
HindIII	AAGCTT	2 cut(s)	8, 1739
HinfI	GANTC	8 cut(s)	293, 583, 811, 910, 1036, 1222, 1802, 1867
HpaI	GTTAAC	1 cut(s)	1974
HpaII	CCGG	6 cut(s)	234, 452, 755, 1040, 1333, 1454
HphI	GGTGA	6 cut(s)	93, 530, 1217, 1456, 1772, 1903
Hpy166II	GTNNAC	4 cut(s)	571, 1285, 1591, 1974
Hpy188I	TCNGA	8 cut(s)	247, 292, 385, 399, 692, 1214, 1359, 1922
Hpy8I	GTNNAC	4 cut(s)	571, 1285, 1591, 1974
HpyAV	CCTTC	5 cut(s)	737, 1508, 1604, 1648, 1840
HpyCH4III	ACNGT	1 cut(s)	63
HpyCH4IV	ACGT	1 cut(s)	1710
HpyF10VI	GCNNNNNNNGC	4 cut(s)	281, 538, 710, 1409
HpyF3I	CTNAG	3 cut(s)	384, 854, 1938
HpySE526I	ACGT	1 cut(s)	1710
HspAI	GCGC	2 cut(s)	282, 284
Kpn2I	TCCGGA	1 cut(s)	1039
Ksp22I	TGATCA	1 cut(s)	1434
KspAI	GTTAAC	1 cut(s)	1974
Kzo9I	GATC	3 cut(s)	225, 1434, 1461
LmnI	GCTCC	4 cut(s)	98, 1199, 1450, 1849
Lsp1109I	GCAGC	3 cut(s)	604, 1160, 1742
LweI	GCATC	3 cut(s)	528, 1399, 1651
MaeI	CTAG	1 cut(s)	1598
MaeII	ACGT	1 cut(s)	1710
MaeIII	GTNAC	1 cut(s)	763
MalI	GATC	3 cut(s)	227, 1436, 1463
MboI	GATC	3 cut(s)	225, 1434, 1461
MfeI	CAATTG	1 cut(s)	542
MhlI	GDGCHC	2 cut(s)	796, 1204
MlyI	GAGTC	3 cut(s)	302, 820, 1876
MmeI	TCCRAC	4 cut(s)	107, 591, 1192, 1731
MroI	TCCGGA	1 cut(s)	1039
MseI	TTAA	8 cut(s)	6, 239, 678, 1256, 1535, 1569, 1973, 2008
MslI	CAYNNNNRTG	5 cut(s)	896, 1404, 1649, 1810, 1953
MspA1I	CMGCKG	1 cut(s)	202
MspI	CCGG	6 cut(s)	234, 452, 755, 1040, 1333, 1454
MspR9I	CCNGG	4 cut(s)	1334, 1344, 1758, 1872
MunI	CAATTG	1 cut(s)	542
Mva1269I	GAATGC	2 cut(s)	367, 1069
MvaI	CCWGG	3 cut(s)	1344, 1758, 1872
MvnI	CGCG	2 cut(s)	267, 284
MwoI	GCNNNNNNNGC	4 cut(s)	281, 538, 710, 1409
NciI	CCSGG	1 cut(s)	1334
NcoI	CCATGG	2 cut(s)	1058, 1164
NdeI	CATATG	2 cut(s)	588, 1809
NdeII	GATC	3 cut(s)	225, 1434, 1461
NlaIV	GGNNCC	3 cut(s)	753, 1452, 1755
NspI	RCATGY	8 cut(s)	186, 536, 895, 1188, 1291, 1342, 1403, 1648
NspV	TTCGAA	1 cut(s)	151
OliI	CACNNNNGTG	1 cut(s)	1810
PaeI	GCATGC	2 cut(s)	1188, 1648
PaeR7I	CTCGAG	1 cut(s)	924
PagI	TCATGA	2 cut(s)	1123, 1906
PauI	GCGCGC	1 cut(s)	282
PciI	ACATGT	2 cut(s)	891, 1287
PctI	GAATGC	2 cut(s)	367, 1069
PfeI	GAWTC	5 cut(s)	583, 910, 1036, 1222, 1802
PflMI	CCANNNNNTGG	1 cut(s)	126
PfoI	TCCNGGA	1 cut(s)	1332
PkrI	GCNGC	6 cut(s)	266, 367, 619, 1079, 1175, 1732
PleI	GAGTC	3 cut(s)	301, 819, 1875
PpsI	GAGTC	3 cut(s)	301, 819, 1875
PscI	ACATGT	2 cut(s)	891, 1287
PshBI	ATTAAT	1 cut(s)	678
Psp1406I	AACGTT	1 cut(s)	1710
Psp6I	CCWGG	3 cut(s)	1342, 1756, 1870
PspFI	CCCAGC	2 cut(s)	198, 1664
PspGI	CCWGG	3 cut(s)	1342, 1756, 1870
PspN4I	GGNNCC	3 cut(s)	753, 1452, 1755
PspPI	GGNCC	3 cut(s)	1591, 1753, 1987
PspXI	VCTCGAGB	1 cut(s)	924
PteI	GCGCGC	1 cut(s)	282
PvuII	CAGCTG	1 cut(s)	202
RsaI	GTAC	1 cut(s)	1526
RsaNI	GTAC	1 cut(s)	1525
RseI	CAYNNNNRTG	5 cut(s)	896, 1404, 1649, 1810, 1953
SaqAI	TTAA	8 cut(s)	6, 239, 678, 1256, 1535, 1569, 1973, 2008
SatI	GCNGC	6 cut(s)	265, 366, 618, 1078, 1174, 1731
Sau3AI	GATC	3 cut(s)	225, 1434, 1461
Sau96I	GGNCC	3 cut(s)	1591, 1753, 1987
SchI	GAGTC	3 cut(s)	302, 820, 1876
ScrFI	CCNGG	4 cut(s)	1334, 1344, 1758, 1872
SduI	GDGCHC	2 cut(s)	796, 1204
SfaNI	GCATC	3 cut(s)	528, 1399, 1651
SfcI	CTRYAG	1 cut(s)	59
Sfr274I	CTCGAG	1 cut(s)	924
SfuI	TTCGAA	1 cut(s)	151
SinI	GGWCC	3 cut(s)	1591, 1753, 1987
SlaI	CTCGAG	1 cut(s)	924
SmiMI	CAYNNNNRTG	5 cut(s)	896, 1404, 1649, 1810, 1953
SmlI	CTYRAG	5 cut(s)	914, 924, 1205, 1322, 1745
SmoI	CTYRAG	5 cut(s)	914, 924, 1205, 1322, 1745
SphI	GCATGC	2 cut(s)	1188, 1648
SsiI	CCGC	6 cut(s)	265, 365, 1077, 1182, 1658, 1767
SspMI	CTAG	1 cut(s)	1598
StyD4I	CCNGG	4 cut(s)	1332, 1342, 1756, 1870
StyI	CCWWGG	2 cut(s)	1058, 1164
TaaI	ACNGT	1 cut(s)	63
TaiI	ACGT	1 cut(s)	1713
TaqI	TCGA	8 cut(s)	151, 177, 260, 298, 446, 925, 1544, 1715
TatI	WGTACW	1 cut(s)	1524
TauI	GCSGC	3 cut(s)	267, 368, 1080
TfiI	GAWTC	5 cut(s)	583, 910, 1036, 1222, 1802
Tru1I	TTAA	8 cut(s)	6, 239, 678, 1256, 1535, 1569, 1973, 2008
Tru9I	TTAA	8 cut(s)	6, 239, 678, 1256, 1535, 1569, 1973, 2008
TscAI	CASTG	1 cut(s)	68
TseI	GCWGC	3 cut(s)	617, 1173, 1730
TspGWI	ACGGA	1 cut(s)	1410
TspRI	CASTG	1 cut(s)	68
Van91I	CCANNNNNTGG	1 cut(s)	126
VpaK11BI	GGWCC	3 cut(s)	1591, 1753, 1987
VspI	ATTAAT	1 cut(s)	678
XapI	RAATTY	4 cut(s)	667, 1547, 1770, 1837
XceI	RCATGY	8 cut(s)	186, 536, 895, 1188, 1291, 1342, 1403, 1648
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1094
XhoI	CTCGAG	1 cut(s)	924
XspI	CTAG	1 cut(s)	1598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.