pentatricopeptide repeat-containing protein At2g22410
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22410 |
| fragaria_vesca | FvH4_3g29070 |
| malus_domestica | MD03G1178400.v1.1 |
| prunus_persica | Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 Prupe.4G244500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0051471 |
| rosa_laevigata | RLG00000034874 |
| rosa_multiflora | Rmu_sc0023383.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00027080 |
| rosa_rugosa | Rorug05G0279100 |
| rosa_samantha | Rh5CG387100 |
| rosa_wichuraiana | Rw5G033140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1465 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 141 |
| AccBSI | CCGCTC | 2 cut(s) | 108, 938 |
| AccI | GTMKAC | 1 cut(s) | 1299 |
| AccII | CGCG | 2 cut(s) | 313, 534 |
| AciI | CCGC | 5 cut(s) | 106, 633, 936, 1442, 1746 |
| AclI | AACGTT | 2 cut(s) | 55, 515 |
| AclWI | GGATC | 2 cut(s) | 220, 235 |
| AcsI | RAATTY | 7 cut(s) | 520, 682, 839, 1562, 1785, 2044, 2062 |
| AcuI | CTGAAG | 1 cut(s) | 239 |
| AfaI | GTAC | 3 cut(s) | 344, 1541, 1920 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 141, 817, 1014 |
| AflIII | ACRYGT | 4 cut(s) | 906, 957, 1302, 1420 |
| AgsI | TTSAA | 8 cut(s) | 167, 496, 520, 757, 857, 1253, 1526, 1567 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 958 |
| AjnI | CCWGG | 2 cut(s) | 1357, 1885 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 352, 384 |
| AleI | CACNNNNGTG | 2 cut(s) | 1825, 2054 |
| AluBI | AGCT | 9 cut(s) | 217, 1151, 1385, 1502, 1648, 1756, 1765, 1896, 2005 |
| AluI | AGCT | 9 cut(s) | 217, 1151, 1385, 1502, 1648, 1756, 1765, 1896, 2005 |
| Alw21I | GWGCWC | 1 cut(s) | 1219 |
| Alw26I | GTCTC | 5 cut(s) | 79, 457, 820, 982, 1932 |
| AlwI | GGATC | 2 cut(s) | 220, 235 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1679 |
| AoxI | GGCC | 1 cut(s) | 933 |
| ApeKI | GCWGC | 2 cut(s) | 1188, 2013 |
| ApoI | RAATTY | 7 cut(s) | 520, 682, 839, 1562, 1785, 2044, 2062 |
| AseI | ATTAAT | 1 cut(s) | 693 |
| AspLEI | GCGC | 2 cut(s) | 301, 1916 |
| AspS9I | GGNCC | 2 cut(s) | 1606, 1768 |
| AsuHPI | GGTGA | 3 cut(s) | 108, 1232, 1918 |
| AvaII | GGWCC | 2 cut(s) | 1606, 1768 |
| BaeGI | GKGCMC | 1 cut(s) | 811 |
| BanI | GGYRCC | 1 cut(s) | 1465 |
| BbsI | GAAGAC | 2 cut(s) | 1336, 1886 |
| Bbv12I | GWGCWC | 1 cut(s) | 1219 |
| BbvI | GCAGC | 2 cut(s) | 1175, 2025 |
| BccI | CCATC | 3 cut(s) | 143, 257, 1523 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1289, 1323 |
| BciT130I | CCWGG | 2 cut(s) | 1359, 1887 |
| BcoDI | GTCTC | 5 cut(s) | 79, 457, 820, 982, 1932 |
| BfaI | CTAG | 3 cut(s) | 815, 1152, 1613 |
| BfoI | RGCGCY | 1 cut(s) | 1917 |
| BisI | GCNGC | 5 cut(s) | 633, 936, 1189, 1746, 2014 |
| BlsI | GCNGC | 5 cut(s) | 634, 937, 1190, 1747, 2015 |
| BmcAI | AGTACT | 1 cut(s) | 1541 |
| Bme1390I | CCNGG | 2 cut(s) | 1359, 1887 |
| Bme18I | GGWCC | 2 cut(s) | 1606, 1768 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 958 |
| BmgT120I | GGNCC | 2 cut(s) | 1606, 1768 |
| BmiI | GGNNCC | 2 cut(s) | 1467, 1770 |
| BmrFI | CCNGG | 2 cut(s) | 1359, 1887 |
| BmsI | GCATC | 1 cut(s) | 1666 |
| BpiI | GAAGAC | 2 cut(s) | 1336, 1886 |
| BpuEI | CTTGAG | 4 cut(s) | 924, 950, 1322, 1781 |
| BsaAI | YACGTR | 1 cut(s) | 638 |
| BsaI | GGTCTC | 1 cut(s) | 457 |
| BsaJI | CCNNGG | 4 cut(s) | 1073, 1179, 1599, 2052 |
| BsaWI | WCCGGW | 1 cut(s) | 466 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1506, 1536 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 141, 817, 1014 |
| Bse1I | ACTGG | 1 cut(s) | 71 |
| Bse3DI | GCAATG | 1 cut(s) | 1089 |
| BseBI | CCWGG | 2 cut(s) | 1359, 1887 |
| BseDI | CCNNGG | 4 cut(s) | 1073, 1179, 1599, 2052 |
| BseGI | GGATG | 2 cut(s) | 9, 778 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 141, 817, 1014 |
| BseMI | GCAATG | 1 cut(s) | 1089 |
| BseMII | CTCAG | 4 cut(s) | 52, 90, 273, 1967 |
| BseNI | ACTGG | 1 cut(s) | 71 |
| BseRI | GAGGAG | 3 cut(s) | 5, 1847, 1884 |
| BseSI | GKGCMC | 1 cut(s) | 811 |
| BseXI | GCAGC | 2 cut(s) | 1175, 2025 |
| BseYI | CCCAGC | 1 cut(s) | 213 |
| Bsh1236I | CGCG | 2 cut(s) | 313, 534 |
| BshFI | GGCC | 1 cut(s) | 935 |
| BshNI | GGYRCC | 1 cut(s) | 1465 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1219 |
| BsiSI | CCGG | 2 cut(s) | 467, 770 |
| BslFI | GGGAC | 3 cut(s) | 196, 1300, 1364 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 141, 817, 1014 |
| BsmAI | GTCTC | 5 cut(s) | 79, 457, 820, 982, 1932 |
| BsmFI | GGGAC | 3 cut(s) | 196, 1300, 1364 |
| BsmI | GAATGC | 1 cut(s) | 1084 |
| BsnI | GGCC | 1 cut(s) | 935 |
| Bso31I | GGTCTC | 1 cut(s) | 457 |
| Bsp1286I | GDGCHC | 2 cut(s) | 811, 1219 |
| Bsp1407I | TGTACA | 2 cut(s) | 342, 1918 |
| Bsp143I | GATC | 3 cut(s) | 225, 240, 1476 |
| Bsp19I | CCATGG | 3 cut(s) | 1073, 1179, 1599 |
| Bsp68I | TCGCGA | 2 cut(s) | 313, 534 |
| BspACI | CCGC | 5 cut(s) | 106, 633, 936, 1442, 1746 |
| BspANI | GGCC | 1 cut(s) | 935 |
| BspCNI | CTCAG | 4 cut(s) | 51, 89, 272, 1966 |
| BspFNI | CGCG | 2 cut(s) | 313, 534 |
| BspHI | TCATGA | 2 cut(s) | 1138, 1774 |
| BspLI | GGNNCC | 2 cut(s) | 1467, 1770 |
| BspPI | GGATC | 2 cut(s) | 220, 235 |
| BspQI | GCTCTTC | 1 cut(s) | 1638 |
| BspT107I | GGYRCC | 1 cut(s) | 1465 |
| BspTNI | GGTCTC | 1 cut(s) | 457 |
| BsrBI | CCGCTC | 2 cut(s) | 108, 938 |
| BsrDI | GCAATG | 1 cut(s) | 1089 |
| BsrGI | TGTACA | 2 cut(s) | 342, 1918 |
| BsrI | ACTGG | 1 cut(s) | 71 |
| BssECI | CCNNGG | 4 cut(s) | 1073, 1179, 1599, 2052 |
| BssMI | GATC | 3 cut(s) | 225, 240, 1476 |
| BssT1I | CCWWGG | 4 cut(s) | 1073, 1179, 1599, 2052 |
| Bst2UI | CCWGG | 2 cut(s) | 1359, 1887 |
| Bst4CI | ACNGT | 1 cut(s) | 880 |
| Bst6I | CTCTTC | 3 cut(s) | 852, 1600, 1638 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 553, 1424 |
| BstAUI | TGTACA | 2 cut(s) | 342, 1918 |
| BstBAI | YACGTR | 1 cut(s) | 638 |
| BstC8I | GCNNGC | 5 cut(s) | 1104, 1149, 1201, 1661, 1800 |
| BstDEI | CTNAG | 5 cut(s) | 38, 76, 259, 869, 1953 |
| BstDSI | CCRYGG | 3 cut(s) | 1073, 1179, 1599 |
| BstF5I | GGATG | 2 cut(s) | 9, 778 |
| BstFNI | CGCG | 2 cut(s) | 313, 534 |
| BstH2I | RGCGCY | 1 cut(s) | 1917 |
| BstHHI | GCGC | 2 cut(s) | 301, 1916 |
| BstKTI | GATC | 3 cut(s) | 228, 243, 1479 |
| BstMAI | GTCTC | 5 cut(s) | 79, 457, 820, 982, 1932 |
| BstMBI | GATC | 3 cut(s) | 225, 240, 1476 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 296, 553, 725, 941, 1108, 1424, 1762, 1844 |
| BstNI | CCWGG | 2 cut(s) | 1359, 1887 |
| BstSCI | CCNGG | 2 cut(s) | 1357, 1885 |
| BstSLI | GKGCMC | 1 cut(s) | 811 |
| BstUI | CGCG | 2 cut(s) | 313, 534 |
| BstV1I | GCAGC | 2 cut(s) | 1175, 2025 |
| BstV2I | GAAGAC | 2 cut(s) | 1336, 1886 |
| BstX2I | RGATCY | 1 cut(s) | 225 |
| BstYI | RGATCY | 1 cut(s) | 225 |
| BsuRI | GGCC | 1 cut(s) | 935 |
| BtgI | CCRYGG | 3 cut(s) | 1073, 1179, 1599 |
| BtsCI | GGATG | 2 cut(s) | 9, 778 |
| BtuMI | TCGCGA | 2 cut(s) | 313, 534 |
| Cac8I | GCNNGC | 5 cut(s) | 1104, 1149, 1201, 1661, 1800 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1679 |
| CciI | TCATGA | 2 cut(s) | 1138, 1774 |
| CfoI | GCGC | 2 cut(s) | 301, 1916 |
| Cfr13I | GGNCC | 2 cut(s) | 1606, 1768 |
| Csp6I | GTAC | 3 cut(s) | 343, 1540, 1919 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 978, 1013 |
| CviQI | GTAC | 3 cut(s) | 343, 1540, 1919 |
| DdeI | CTNAG | 5 cut(s) | 38, 76, 259, 869, 1953 |
| DpnI | GATC | 3 cut(s) | 227, 242, 1478 |
| DpnII | GATC | 3 cut(s) | 225, 240, 1476 |
| DriI | GACNNNNNGTC | 1 cut(s) | 958 |
| Eam1104I | CTCTTC | 3 cut(s) | 852, 1600, 1638 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 958 |
| EarI | CTCTTC | 3 cut(s) | 852, 1600, 1638 |
| Eco130I | CCWWGG | 4 cut(s) | 1073, 1179, 1599, 2052 |
| Eco31I | GGTCTC | 1 cut(s) | 457 |
| Eco47I | GGWCC | 2 cut(s) | 1606, 1768 |
| Eco57I | CTGAAG | 1 cut(s) | 239 |
| EcoRI | GAATTC | 1 cut(s) | 682 |
| EcoRII | CCWGG | 2 cut(s) | 1357, 1885 |
| EcoT14I | CCWWGG | 4 cut(s) | 1073, 1179, 1599, 2052 |
| ErhI | CCWWGG | 4 cut(s) | 1073, 1179, 1599, 2052 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1354, 1386, 1732, 1764 |
| FaqI | GGGAC | 3 cut(s) | 196, 1300, 1364 |
| FauI | CCCGC | 1 cut(s) | 113 |
| FauNDI | CATATG | 2 cut(s) | 603, 1824 |
| FblI | GTMKAC | 1 cut(s) | 1299 |
| Fnu4HI | GCNGC | 5 cut(s) | 633, 936, 1189, 1746, 2014 |
| FokI | GGATG | 1 cut(s) | 785 |
| Fsp4HI | GCNGC | 5 cut(s) | 633, 936, 1189, 1746, 2014 |
| FspBI | CTAG | 3 cut(s) | 815, 1152, 1613 |
| GlaI | GCGC | 2 cut(s) | 300, 1915 |
| GluI | GCNGC | 5 cut(s) | 633, 936, 1189, 1746, 2014 |
| GsaI | CCCAGC | 1 cut(s) | 217 |
| HaeII | RGCGCY | 1 cut(s) | 1917 |
| HaeIII | GGCC | 1 cut(s) | 935 |
| HapII | CCGG | 2 cut(s) | 467, 770 |
| HhaI | GCGC | 2 cut(s) | 301, 1916 |
| Hin6I | GCGC | 2 cut(s) | 299, 1914 |
| HinP1I | GCGC | 2 cut(s) | 299, 1914 |
| HincII | GTYRAC | 2 cut(s) | 1300, 1989 |
| HindII | GTYRAC | 2 cut(s) | 1300, 1989 |
| HindIII | AAGCTT | 1 cut(s) | 1754 |
| HpaI | GTTAAC | 1 cut(s) | 1989 |
| HpaII | CCGG | 2 cut(s) | 467, 770 |
| HphI | GGTGA | 3 cut(s) | 108, 1232, 1918 |
| Hpy166II | GTNNAC | 5 cut(s) | 33, 586, 1300, 1606, 1989 |
| Hpy8I | GTNNAC | 5 cut(s) | 33, 586, 1300, 1606, 1989 |
| HpyAV | CCTTC | 5 cut(s) | 647, 751, 1619, 1837, 1855 |
| HpyCH4III | ACNGT | 1 cut(s) | 880 |
| HpyCH4IV | ACGT | 4 cut(s) | 55, 515, 637, 1791 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 296, 553, 725, 941, 1108, 1424, 1762, 1844 |
| HpyF3I | CTNAG | 5 cut(s) | 38, 76, 259, 869, 1953 |
| HpySE526I | ACGT | 4 cut(s) | 55, 515, 637, 1791 |
| HspAI | GCGC | 2 cut(s) | 299, 1914 |
| KspAI | GTTAAC | 1 cut(s) | 1989 |
| Kzo9I | GATC | 3 cut(s) | 225, 240, 1476 |
| LguI | GCTCTTC | 1 cut(s) | 1638 |
| LmnI | GCTCC | 2 cut(s) | 1214, 2002 |
| Lsp1109I | GCAGC | 2 cut(s) | 1175, 2025 |
| LweI | GCATC | 1 cut(s) | 1666 |
| MaeI | CTAG | 3 cut(s) | 815, 1152, 1613 |
| MaeII | ACGT | 4 cut(s) | 55, 515, 637, 1791 |
| MaeIII | GTNAC | 2 cut(s) | 329, 778 |
| MalI | GATC | 3 cut(s) | 227, 242, 1478 |
| MbiI | CCGCTC | 2 cut(s) | 108, 938 |
| MboI | GATC | 3 cut(s) | 225, 240, 1476 |
| MboII | GAAGA | 9 cut(s) | 792, 869, 1072, 1336, 1374, 1538, 1587, 1655, 1891 |
| MfeI | CAATTG | 2 cut(s) | 139, 1899 |
| MflI | RGATCY | 1 cut(s) | 225 |
| MhlI | GDGCHC | 2 cut(s) | 811, 1219 |
| MlyI | GAGTC | 4 cut(s) | 51, 286, 317, 1876 |
| MseI | TTAA | 8 cut(s) | 512, 693, 731, 765, 1407, 1550, 1584, 1988 |
| MslI | CAYNNNNRTG | 6 cut(s) | 911, 1419, 1722, 1779, 1825, 2054 |
| MspA1I | CMGCKG | 1 cut(s) | 217 |
| MspI | CCGG | 2 cut(s) | 467, 770 |
| MspR9I | CCNGG | 2 cut(s) | 1359, 1887 |
| MunI | CAATTG | 2 cut(s) | 139, 1899 |
| Mva1269I | GAATGC | 1 cut(s) | 1084 |
| MvaI | CCWGG | 2 cut(s) | 1359, 1887 |
| MvnI | CGCG | 2 cut(s) | 313, 534 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 296, 553, 725, 941, 1108, 1424, 1762, 1844 |
| NcoI | CCATGG | 3 cut(s) | 1073, 1179, 1599 |
| NdeI | CATATG | 2 cut(s) | 603, 1824 |
| NdeII | GATC | 3 cut(s) | 225, 240, 1476 |
| NlaIV | GGNNCC | 2 cut(s) | 1467, 1770 |
| NruI | TCGCGA | 2 cut(s) | 313, 534 |
| OliI | CACNNNNGTG | 2 cut(s) | 1825, 2054 |
| PaeI | GCATGC | 2 cut(s) | 1203, 1663 |
| PagI | TCATGA | 2 cut(s) | 1138, 1774 |
| PciI | ACATGT | 4 cut(s) | 906, 957, 1302, 1420 |
| PciSI | GCTCTTC | 1 cut(s) | 1638 |
| PctI | GAATGC | 1 cut(s) | 1084 |
| PfeI | GAWTC | 6 cut(s) | 409, 598, 925, 1051, 1237, 1817 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 141 |
| PkrI | GCNGC | 5 cut(s) | 634, 937, 1190, 1747, 2015 |
| PleI | GAGTC | 4 cut(s) | 50, 285, 316, 1876 |
| PpsI | GAGTC | 4 cut(s) | 50, 285, 316, 1876 |
| Ppu21I | YACGTR | 1 cut(s) | 638 |
| PscI | ACATGT | 4 cut(s) | 906, 957, 1302, 1420 |
| PshBI | ATTAAT | 1 cut(s) | 693 |
| Psp1406I | AACGTT | 2 cut(s) | 55, 515 |
| Psp6I | CCWGG | 2 cut(s) | 1357, 1885 |
| PspFI | CCCAGC | 1 cut(s) | 213 |
| PspGI | CCWGG | 2 cut(s) | 1357, 1885 |
| PspN4I | GGNNCC | 2 cut(s) | 1467, 1770 |
| PspPI | GGNCC | 2 cut(s) | 1606, 1768 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1679 |
| PsuI | RGATCY | 1 cut(s) | 225 |
| PvuII | CAGCTG | 1 cut(s) | 217 |
| RruI | TCGCGA | 2 cut(s) | 313, 534 |
| RsaI | GTAC | 3 cut(s) | 344, 1541, 1920 |
| RsaNI | GTAC | 3 cut(s) | 343, 1540, 1919 |
| RseI | CAYNNNNRTG | 6 cut(s) | 911, 1419, 1722, 1779, 1825, 2054 |
| SalI | GTCGAC | 1 cut(s) | 1298 |
| SapI | GCTCTTC | 1 cut(s) | 1638 |
| SaqAI | TTAA | 8 cut(s) | 512, 693, 731, 765, 1407, 1550, 1584, 1988 |
| SatI | GCNGC | 5 cut(s) | 633, 936, 1189, 1746, 2014 |
| Sau3AI | GATC | 3 cut(s) | 225, 240, 1476 |
| Sau96I | GGNCC | 2 cut(s) | 1606, 1768 |
| ScaI | AGTACT | 1 cut(s) | 1541 |
| SchI | GAGTC | 4 cut(s) | 51, 286, 317, 1876 |
| ScrFI | CCNGG | 2 cut(s) | 1359, 1887 |
| SduI | GDGCHC | 2 cut(s) | 811, 1219 |
| SfaNI | GCATC | 1 cut(s) | 1666 |
| SinI | GGWCC | 2 cut(s) | 1606, 1768 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 911, 1419, 1722, 1779, 1825, 2054 |
| SmlI | CTYRAG | 4 cut(s) | 929, 939, 1337, 1760 |
| SmoI | CTYRAG | 4 cut(s) | 929, 939, 1337, 1760 |
| SphI | GCATGC | 2 cut(s) | 1203, 1663 |
| SsiI | CCGC | 5 cut(s) | 106, 633, 936, 1442, 1746 |
| SspI | AATATT | 1 cut(s) | 1570 |
| SspMI | CTAG | 3 cut(s) | 815, 1152, 1613 |
| StyD4I | CCNGG | 2 cut(s) | 1357, 1885 |
| StyI | CCWWGG | 4 cut(s) | 1073, 1179, 1599, 2052 |
| TaaI | ACNGT | 1 cut(s) | 880 |
| TaiI | ACGT | 4 cut(s) | 58, 518, 640, 1794 |
| TaqI | TCGA | 3 cut(s) | 275, 461, 1299 |
| TatI | WGTACW | 3 cut(s) | 342, 1539, 1918 |
| TauI | GCSGC | 3 cut(s) | 635, 938, 1748 |
| TfiI | GAWTC | 6 cut(s) | 409, 598, 925, 1051, 1237, 1817 |
| Tru1I | TTAA | 8 cut(s) | 512, 693, 731, 765, 1407, 1550, 1584, 1988 |
| Tru9I | TTAA | 8 cut(s) | 512, 693, 731, 765, 1407, 1550, 1584, 1988 |
| TseI | GCWGC | 2 cut(s) | 1188, 2013 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 141 |
| VpaK11BI | GGWCC | 2 cut(s) | 1606, 1768 |
| VspI | ATTAAT | 1 cut(s) | 693 |
| XapI | RAATTY | 7 cut(s) | 520, 682, 839, 1562, 1785, 2044, 2062 |
| XmiI | GTMKAC | 1 cut(s) | 1299 |
| XspI | CTAG | 3 cut(s) | 815, 1152, 1613 |
| ZrmI | AGTACT | 1 cut(s) | 1541 |