Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0014336

Physical Location & Seq

Genomic Coordinates Forward (+)

514361 .. 520233

Gene Structure 5873 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1003600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGATGCAAGCCAATCTCCTCACTCCATCTCCACGCCCCGCCACCGCCGCCACCTCCACGGCCTTCAAGTCCCTACCCCGACCACCTCATGTGCCCCGCCACCACCGGCCCCCATTCTCCGTCAGAGCCTCCATTTCCGAGGCCGCCCAATCGTCGCCCTCCATCACCGTCGACTCACCCCCGCCCCCGGCCCCGAAGCAGCACCAAAAGCTCAACAAGTACAGCTCCCGCATCACGGAGCCCAAGTCCCAGGGTGGGTCCCAGGCCATTCTTCACGGCGTGGGGCTCTCCGAGGAGGATTTGAGCAAGCCCCAGATCGGCATATCGTCGGTCTGGTACGAAGGGAACACCTGCAATATGCACTTGCTAGGCCTCTCGGAGGCTGTGAAAGAAGGGGTCCAAGAGGCCGGCATGGTGGGGTTCCGCTTCAACACGGTCGGGGTCAGCGATGCAATCTCCATGGGCACCAGAGGAATGTGCTACAGCTTGCAGTCCCGAGACTTGATTGCCGATAGCATTGAGACTGTTATGGGCGCTCAGTGGTACGACGGCAACATCTCCATTCCTGGTTGTGACAAAAATATGCCGGGTACAATTATGGCGATGGGAAGGCTCAACCGACCAAGTATTATGATTTATGGTGGAACTATTAAGCCAGGGCACTTCCAAGGCAATACTTATGATATAATATCTGCATTTCAGTGTTATGGAGAATATGTAAGTGGATCCATAAGCGATGAGCAACGAAAGAATGTTGTCCTTAACTCTTGCCCTGGGGCTGGAGCTTGTGGTGGGATGTATACTGCTAATACGATGGCTTCTGCCATTGAAGCTATGGGAATGTCTATTCCTTACAGCTCTTCTACGCCTGCTGAAGATCCATTGAAACTGGATGAGTGCCGATTGGCTGGGAAATACCTCTTGGAATTACTGAAAATGGATTTGAAACCTCGAGATATTATTACTCCAAAGTCACTACATAATGCAATGGTTATTGTTATGGCATTAGGGGGGTCAACCAATGCTGTTCTGCACTTGATTGCTATTGCAAGGTCTGTTGGTTTGGAATTAAATCTGGATGATTTCCAGAAGGTTAGCGATAAGGTTCCATTTCTTGCAGATCTTAAGCCTAGTGGCAAGTATGTCATGGAGGATGTACACAAGATTGGAGGAACACCAGCGGTCATTCGGTACCTTTTGGAGAACGGGTTGTTACATGGGGATTGTATGACTGTCACCGGAAGGACAGTGGCTGAGAATGCAGAAAGTTTCCTTCCTTTGGCTAATGGACAGGATATAATAAGGCCCTTGGGAAACCCTATCAAGAAAACAGGCCATCTGCAAATATTATATGGAAATCTTGCACCAGAGGGTTCTGTAGCAAAAATTACAGGAAAAGAGGGGCTATATTTCTCTGGTCCTGCACTTGTCTTTGAAGGTGAGGAGTCAATGGTTGCAGCTATCTCAGAGGATCCTATGAGTTTTAAGGGGAAAGTAGTTGTTATTAGAGGAGAGGGGCCAAAGGGAGGACCAGGCATGCCAGAAATGTTAACACCAACCAGTGCAATAATGGGTGCAGGACTGGGAAAGGAGGTTGCTTTATTGACAGATGGTAGGTTTTCAGGCGGTTCGCATGGATTTGTTGTTGGCCACATATGTCCTGAAGCACAGGAAGGTGGTCCTATTGGATTAATTGAGAATGGGGACATCATCAATGTTGATGTTGCAAACAAGAGAATAGATGTCCAGTTAACCGATCAAGAGATGGACAGGCGAAGGAAGAACTATATTCCATCGCCATACAAGGCTAACCGTGGAATTTTGTACAAGTACATCAAGAACGTGCAGCCGGCTTCAAAGGGATGCGTGACTGATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004160 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009507 GO:0009532 GO:0009536 GO:0009553 GO:0009555 GO:0009570 GO:0009628 GO:0009651 GO:0009987 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0019752 GO:0022622 GO:0032501 GO:0032502 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046872 GO:0046914 GO:0048229 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0071704 GO:0099402 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00290 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

ILVD_EDD

Protein Analysis

627

Amino Acids

66.87

Weight (kDa)

6.55

Isoelectric Point (pI)

42.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ILVD_EDD_N	PF00920	103 - 420	3.5e-131	Dihydroxy-acid/6-phosphogluconate dehydratase N-terminal
ILV_EDD_C	PF24877	432 - 622	1.6e-72	Dihydroxy-acid/6-phosphogluconate dehydratase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014336)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23940 AT3G23940
fragaria_vesca	FvH4_7g04190
malus_domestica	MD04G1003600.v1.1
prunus_persica	Prupe.1G003100_v2.0.a1 Prupe.1G003100_v2.0.a1
pyrus_communis	pycom04g00370 pycom420g00750
rosa_chinensis	RchiOBHm_Chr1g0328531
rosa_laevigata	RLG00000029925
rosa_multiflora	Rmu_sc0001563.1_g000010
rosa_roxburghii	Rroxscaffold_4G00321530
rosa_rugosa	Rorug01G0074800
rosa_samantha	Rh1AG093500 Rh1CG090600 Rh1DG096600
rosa_wichuraiana	Rw1G007280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	359
Acc36I	ACCTGC	1 cut(s)	359
Acc65I	GGTACC	1 cut(s)	1191
AccB1I	GGYRCC	2 cut(s)	464, 1191
AccI	GTMKAC	2 cut(s)	171, 800
AclWI	GGATC	5 cut(s)	720, 733, 872, 1466, 1479
AcoI	YGGCCR	1 cut(s)	1648
AcsI	RAATTY	1 cut(s)	1818
AcuI	CTGAAG	2 cut(s)	894, 1683
AdeI	CACNNNGTG	1 cut(s)	280
AfaI	GTAC	8 cut(s)	221, 338, 545, 592, 1158, 1193, 1826, 1832
AfiI	CCNNNNNNNGG	8 cut(s)	187, 235, 255, 317, 379, 779, 1279, 1526
AflII	CTTAAG	1 cut(s)	1124
AgsI	TTSAA	7 cut(s)	67, 430, 830, 886, 946, 1436, 1857
AjnI	CCWGG	6 cut(s)	249, 261, 565, 655, 772, 1531
AjuI	GAANNNNNNNTTGG	2 cut(s)	905, 937
AluBI	AGCT	7 cut(s)	211, 225, 486, 785, 833, 858, 1460
AluI	AGCT	7 cut(s)	211, 225, 486, 785, 833, 858, 1460
Alw26I	GTCTC	2 cut(s)	492, 515
AlwI	GGATC	5 cut(s)	720, 733, 872, 1466, 1479
AlwNI	CAGNNNCTG	1 cut(s)	1253
Ama87I	CYCGRG	2 cut(s)	495, 951
ApeKI	GCWGC	3 cut(s)	199, 1457, 1846
ApoI	RAATTY	1 cut(s)	1818
AseI	ATTAAT	1 cut(s)	1691
Asp718I	GGTACC	1 cut(s)	1191
AspLEI	GCGC	1 cut(s)	536
AspS9I	GGNCC	9 cut(s)	108, 190, 258, 397, 1305, 1418, 1517, 1529, 1679
AsuC2I	CCSGG	2 cut(s)	188, 588
AsuHPI	GGTGA	4 cut(s)	157, 168, 1228, 1451
AvaI	CYCGRG	2 cut(s)	495, 951
AvaII	GGWCC	5 cut(s)	258, 397, 1418, 1529, 1679
BaeGI	GKGCMC	3 cut(s)	96, 467, 663
BalI	TGGCCA	1 cut(s)	1650
BamHI	GGATCC	2 cut(s)	725, 1471
BanI	GGYRCC	2 cut(s)	464, 1191
BanII	GRGCYC	2 cut(s)	243, 288
BbvI	GCAGC	3 cut(s)	211, 1469, 1858
BccI	CCATC	8 cut(s)	34, 170, 598, 808, 1344, 1604, 1759, 1801
BceAI	ACGGC	3 cut(s)	75, 292, 565
BciT130I	CCWGG	6 cut(s)	251, 263, 567, 657, 774, 1533
BcnI	CCSGG	2 cut(s)	188, 588
BcoDI	GTCTC	2 cut(s)	492, 515
BfaI	CTAG	2 cut(s)	368, 1131
BfmI	CTRYAG	2 cut(s)	481, 1377
BfoI	RGCGCY	1 cut(s)	537
BfrI	CTTAAG	1 cut(s)	1124
BfuAI	ACCTGC	1 cut(s)	359
BglII	AGATCT	1 cut(s)	1120
BisI	GCNGC	5 cut(s)	48, 144, 200, 1458, 1847
BlsI	GCNGC	5 cut(s)	49, 145, 201, 1459, 1848
Bme1390I	CCNGG	8 cut(s)	188, 251, 263, 567, 588, 657, 774, 1533
Bme18I	GGWCC	5 cut(s)	258, 397, 1418, 1529, 1679
BmeT110I	CYCGRG	2 cut(s)	495, 951
BmgT120I	GGNCC	9 cut(s)	108, 190, 258, 397, 1305, 1418, 1517, 1529, 1679
BmrFI	CCNGG	8 cut(s)	188, 251, 263, 567, 588, 657, 774, 1533
BmrI	ACTGGG	1 cut(s)	1592
BmsI	GCATC	3 cut(s)	240, 439, 1853
BmuI	ACTGGG	1 cut(s)	1592
BpmI	CTGGAG	1 cut(s)	801
BpuMI	CCSGG	2 cut(s)	188, 588
BsaWI	WCCGGW	1 cut(s)	1238
BsaXI	ACNNNNNCTCC	8 cut(s)	13, 43, 230, 260, 702, 732, 1193, 1223
Bsc4I	CCNNNNNNNGG	8 cut(s)	187, 235, 255, 317, 379, 779, 1279, 1526
Bse118I	RCCGGY	3 cut(s)	105, 407, 1849
Bse1I	ACTGG	4 cut(s)	894, 1560, 1587, 1747
Bse3DI	GCAATG	1 cut(s)	993
BseBI	CCWGG	6 cut(s)	251, 263, 567, 657, 774, 1533
BseGI	GGATG	5 cut(s)	801, 898, 1084, 1159, 1868
BseLI	CCNNNNNNNGG	8 cut(s)	187, 235, 255, 317, 379, 779, 1279, 1526
BseMI	GCAATG	1 cut(s)	993
BseMII	CTCAG	3 cut(s)	551, 1245, 1479
BseNI	ACTGG	4 cut(s)	894, 1560, 1587, 1747
BseRI	GAGGAG	4 cut(s)	8, 308, 1457, 1524
BseSI	GKGCMC	3 cut(s)	96, 467, 663
BseXI	GCAGC	3 cut(s)	211, 1469, 1858
BseYI	CCCAGC	1 cut(s)	908
BsgI	GTGCAG	4 cut(s)	1016, 1407, 1596, 1865
Bsh1285I	CGRYCG	1 cut(s)	438
BshNI	GGYRCC	2 cut(s)	464, 1191
BsiEI	CGRYCG	1 cut(s)	438
BsiHKCI	CYCGRG	2 cut(s)	495, 951
BsiSI	CCGG	6 cut(s)	106, 188, 408, 587, 1239, 1850
BslFI	GGGAC	5 cut(s)	55, 232, 244, 478, 1718
BslI	CCNNNNNNNGG	8 cut(s)	187, 235, 255, 317, 379, 779, 1279, 1526
BsmAI	GTCTC	2 cut(s)	492, 515
BsmFI	GGGAC	5 cut(s)	55, 232, 244, 478, 1718
BsmI	GAATGC	1 cut(s)	1264
BsoBI	CYCGRG	2 cut(s)	495, 951
Bsp1286I	GDGCHC	5 cut(s)	96, 243, 288, 467, 663
Bsp1407I	TGTACA	2 cut(s)	1156, 1824
Bsp143I	GATC	6 cut(s)	315, 725, 877, 1120, 1471, 1756
Bsp19I	CCATGG	1 cut(s)	459
BspCNI	CTCAG	3 cut(s)	550, 1246, 1478
BspMI	ACCTGC	1 cut(s)	359
BspPI	GGATC	5 cut(s)	720, 733, 872, 1466, 1479
BspQI	GCTCTTC	1 cut(s)	865
BspT107I	GGYRCC	2 cut(s)	464, 1191
BspTI	CTTAAG	1 cut(s)	1124
BsrDI	GCAATG	1 cut(s)	993
BsrFI	RCCGGY	3 cut(s)	105, 407, 1849
BsrGI	TGTACA	2 cut(s)	1156, 1824
BsrI	ACTGG	4 cut(s)	894, 1560, 1587, 1747
BssAI	RCCGGY	3 cut(s)	105, 407, 1849
BssMI	GATC	6 cut(s)	315, 725, 877, 1120, 1471, 1756
BssNAI	GTATAC	1 cut(s)	801
BssT1I	CCWWGG	3 cut(s)	459, 667, 1308
Bst1107I	GTATAC	1 cut(s)	801
Bst2UI	CCWGG	6 cut(s)	251, 263, 567, 657, 774, 1533
Bst4CI	ACNGT	6 cut(s)	169, 436, 526, 1234, 1249, 1814
Bst6I	CTCTTC	1 cut(s)	865
BstAFI	CTTAAG	1 cut(s)	1124
BstAUI	TGTACA	2 cut(s)	1156, 1824
BstC8I	GCNNGC	7 cut(s)	9, 308, 409, 488, 870, 1538, 1851
BstDEI	CTNAG	3 cut(s)	537, 1254, 1465
BstDSI	CCRYGG	3 cut(s)	57, 459, 1813
BstENI	CCTNNNNNAGG	1 cut(s)	377
BstF5I	GGATG	5 cut(s)	801, 898, 1084, 1159, 1868
BstH2I	RGCGCY	1 cut(s)	537
BstHHI	GCGC	1 cut(s)	536
BstKTI	GATC	6 cut(s)	318, 728, 880, 1123, 1474, 1759
BstMAI	GTCTC	2 cut(s)	492, 515
BstMBI	GATC	6 cut(s)	315, 725, 877, 1120, 1471, 1756
BstMCI	CGRYCG	1 cut(s)	438
BstMWI	GCNNNNNNNGC	4 cut(s)	47, 208, 830, 1259
BstNI	CCWGG	6 cut(s)	251, 263, 567, 657, 774, 1533
BstNSI	RCATGY	1 cut(s)	1540
BstSCI	CCNGG	8 cut(s)	186, 249, 261, 565, 586, 655, 772, 1531
BstSFI	CTRYAG	2 cut(s)	481, 1377
BstSLI	GKGCMC	3 cut(s)	96, 467, 663
BstV1I	GCAGC	3 cut(s)	211, 1469, 1858
BstX2I	RGATCY	4 cut(s)	725, 877, 1120, 1471
BstYI	RGATCY	4 cut(s)	725, 877, 1120, 1471
BstZ17I	GTATAC	1 cut(s)	801
BtgI	CCRYGG	3 cut(s)	57, 459, 1813
BtgZI	GCGATG	4 cut(s)	462, 617, 750, 1779
BtsCI	GGATG	5 cut(s)	801, 898, 1084, 1159, 1868
BtsIMutI	CAGTG	4 cut(s)	545, 707, 1254, 1567
BveI	ACCTGC	1 cut(s)	359
Cac8I	GCNNGC	7 cut(s)	9, 308, 409, 488, 870, 1538, 1851
CaiI	CAGNNNCTG	1 cut(s)	1253
CfoI	GCGC	1 cut(s)	536
Cfr10I	RCCGGY	3 cut(s)	105, 407, 1849
Cfr13I	GGNCC	9 cut(s)	108, 190, 258, 397, 1305, 1418, 1517, 1529, 1679
Csp6I	GTAC	8 cut(s)	220, 337, 544, 591, 1157, 1192, 1825, 1831
CviAII	CATG	7 cut(s)	89, 412, 460, 1147, 1217, 1537, 1634
CviQI	GTAC	8 cut(s)	220, 337, 544, 591, 1157, 1192, 1825, 1831
DdeI	CTNAG	3 cut(s)	537, 1254, 1465
DpnI	GATC	6 cut(s)	317, 727, 879, 1122, 1473, 1758
DpnII	GATC	6 cut(s)	315, 725, 877, 1120, 1471, 1756
DraIII	CACNNNGTG	1 cut(s)	280
EaeI	YGGCCR	1 cut(s)	1648
Eam1104I	CTCTTC	1 cut(s)	865
EarI	CTCTTC	1 cut(s)	865
Eco130I	CCWWGG	3 cut(s)	459, 667, 1308
Eco147I	AGGCCT	1 cut(s)	372
Eco24I	GRGCYC	2 cut(s)	243, 288
Eco47I	GGWCC	5 cut(s)	258, 397, 1418, 1529, 1679
Eco57I	CTGAAG	2 cut(s)	894, 1683
Eco88I	CYCGRG	2 cut(s)	495, 951
EcoNI	CCTNNNNNAGG	1 cut(s)	377
EcoO109I	RGGNCCY	2 cut(s)	258, 1305
EcoRII	CCWGG	6 cut(s)	249, 261, 565, 655, 772, 1531
EcoT14I	CCWWGG	3 cut(s)	459, 667, 1308
EcoT38I	GRGCYC	2 cut(s)	243, 288
ErhI	CCWWGG	3 cut(s)	459, 667, 1308
FaeI	CATG	7 cut(s)	92, 415, 463, 1150, 1220, 1540, 1637
FaqI	GGGAC	5 cut(s)	55, 232, 244, 478, 1718
FatI	CATG	7 cut(s)	88, 411, 459, 1146, 1216, 1536, 1633
FauI	CCCGC	4 cut(s)	46, 104, 189, 236
FauNDI	CATATG	1 cut(s)	1655
FblI	GTMKAC	2 cut(s)	171, 800
Fnu4HI	GCNGC	5 cut(s)	48, 144, 200, 1458, 1847
FokI	GGATG	5 cut(s)	808, 905, 1091, 1166, 1875
FriOI	GRGCYC	2 cut(s)	243, 288
Fsp4HI	GCNGC	5 cut(s)	48, 144, 200, 1458, 1847
FspBI	CTAG	2 cut(s)	368, 1131
GlaI	GCGC	1 cut(s)	535
GluI	GCNGC	5 cut(s)	48, 144, 200, 1458, 1847
GsaI	CCCAGC	1 cut(s)	912
GsuI	CTGGAG	1 cut(s)	801
HaeII	RGCGCY	1 cut(s)	537
HapII	CCGG	6 cut(s)	106, 188, 408, 587, 1239, 1850
HhaI	GCGC	1 cut(s)	536
Hin1II	CATG	7 cut(s)	92, 415, 463, 1150, 1220, 1540, 1637
Hin6I	GCGC	1 cut(s)	534
HinP1I	GCGC	1 cut(s)	534
HincII	GTYRAC	4 cut(s)	172, 1017, 1551, 1752
HindII	GTYRAC	4 cut(s)	172, 1017, 1551, 1752
HinfI	GANTC	2 cut(s)	173, 1445
HpaI	GTTAAC	2 cut(s)	1551, 1752
HpaII	CCGG	6 cut(s)	106, 188, 408, 587, 1239, 1850
HphI	GGTGA	4 cut(s)	157, 168, 1228, 1451
Hpy166II	GTNNAC	6 cut(s)	172, 801, 1017, 1159, 1551, 1752
Hpy188I	TCNGA	5 cut(s)	125, 139, 292, 379, 1468
Hpy188III	TCNNGA	8 cut(s)	495, 953, 1076, 1087, 1324, 1661, 1760, 1837
Hpy8I	GTNNAC	6 cut(s)	172, 801, 1017, 1159, 1551, 1752
Hpy99I	CGWCG	4 cut(s)	157, 173, 331, 551
HpyCH4III	ACNGT	6 cut(s)	169, 436, 526, 1234, 1249, 1814
HpyCH4IV	ACGT	1 cut(s)	1842
HpyF10VI	GCNNNNNNNGC	4 cut(s)	47, 208, 830, 1259
HpyF3I	CTNAG	3 cut(s)	537, 1254, 1465
HpySE526I	ACGT	1 cut(s)	1842
Hsp92II	CATG	7 cut(s)	92, 415, 463, 1150, 1220, 1540, 1637
HspAI	GCGC	1 cut(s)	534
KflI	GGGWCCC	1 cut(s)	258
KpnI	GGTACC	1 cut(s)	1195
KroI	GCCGGC	2 cut(s)	407, 1849
KroNI	GCCGGC	2 cut(s)	409, 1851
KspAI	GTTAAC	2 cut(s)	1551, 1752
Kzo9I	GATC	6 cut(s)	315, 725, 877, 1120, 1471, 1756
LguI	GCTCTTC	1 cut(s)	865
LmnI	GCTCC	3 cut(s)	230, 238, 782
Lsp1109I	GCAGC	3 cut(s)	211, 1469, 1858
LweI	GCATC	3 cut(s)	240, 439, 1853
MaeI	CTAG	2 cut(s)	368, 1131
MaeII	ACGT	1 cut(s)	1842
MaeIII	GTNAC	5 cut(s)	572, 972, 1212, 1234, 1867
MalI	GATC	6 cut(s)	317, 727, 879, 1122, 1473, 1758
MboI	GATC	6 cut(s)	315, 725, 877, 1120, 1471, 1756
MboII	GAAGA	4 cut(s)	263, 852, 887, 1792
MflI	RGATCY	4 cut(s)	725, 877, 1120, 1471
MhlI	GDGCHC	5 cut(s)	96, 243, 288, 467, 663
MlsI	TGGCCA	1 cut(s)	1650
MluCI	AATT	6 cut(s)	594, 926, 1067, 1386, 1692, 1818
MluNI	TGGCCA	1 cut(s)	1650
MlyI	GAGTC	2 cut(s)	167, 1454
Mox20I	TGGCCA	1 cut(s)	1650
MroNI	GCCGGC	2 cut(s)	407, 1849
MscI	TGGCCA	1 cut(s)	1650
MseI	TTAA	8 cut(s)	651, 762, 1070, 1125, 1485, 1550, 1691, 1751
MslI	CAYNNNNRTG	1 cut(s)	700
Msp20I	TGGCCA	1 cut(s)	1650
MspA1I	CMGCKG	1 cut(s)	1181
MspCI	CTTAAG	1 cut(s)	1124
MspI	CCGG	6 cut(s)	106, 188, 408, 587, 1239, 1850
MspR9I	CCNGG	8 cut(s)	188, 251, 263, 567, 588, 657, 774, 1533
Mva1269I	GAATGC	1 cut(s)	1264
MvaI	CCWGG	6 cut(s)	251, 263, 567, 657, 774, 1533
MwoI	GCNNNNNNNGC	4 cut(s)	47, 208, 830, 1259
NaeI	GCCGGC	2 cut(s)	409, 1851
NciI	CCSGG	2 cut(s)	188, 588
NcoI	CCATGG	1 cut(s)	459
NdeI	CATATG	1 cut(s)	1655
NdeII	GATC	6 cut(s)	315, 725, 877, 1120, 1471, 1756
NgoMIV	GCCGGC	2 cut(s)	407, 1849
NlaIII	CATG	7 cut(s)	92, 415, 463, 1150, 1220, 1540, 1637
NmuCI	GTSAC	4 cut(s)	572, 972, 1234, 1867
NspI	RCATGY	1 cut(s)	1540
PaeI	GCATGC	1 cut(s)	1540
PaeR7I	CTCGAG	1 cut(s)	951
PaqCI	CACCTGC	1 cut(s)	359
PasI	CCCWGGG	2 cut(s)	250, 773
PceI	AGGCCT	1 cut(s)	372
PciSI	GCTCTTC	1 cut(s)	865
PcsI	WCGNNNNNNNCGW	1 cut(s)	444
PctI	GAATGC	1 cut(s)	1264
PdiI	GCCGGC	2 cut(s)	409, 1851
PkrI	GCNGC	5 cut(s)	49, 145, 201, 1459, 1848
PleI	GAGTC	2 cut(s)	167, 1453
PpsI	GAGTC	2 cut(s)	167, 1453
PpuMI	RGGWCCY	1 cut(s)	258
PshBI	ATTAAT	1 cut(s)	1691
Psp5II	RGGWCCY	1 cut(s)	258
Psp6I	CCWGG	6 cut(s)	249, 261, 565, 655, 772, 1531
PspFI	CCCAGC	1 cut(s)	908
PspGI	CCWGG	6 cut(s)	249, 261, 565, 655, 772, 1531
PspPI	GGNCC	9 cut(s)	108, 190, 258, 397, 1305, 1418, 1517, 1529, 1679
PspPPI	RGGWCCY	1 cut(s)	258
PstNI	CAGNNNCTG	1 cut(s)	1253
PsuI	RGATCY	4 cut(s)	725, 877, 1120, 1471
RsaI	GTAC	8 cut(s)	221, 338, 545, 592, 1158, 1193, 1826, 1832
RsaNI	GTAC	8 cut(s)	220, 337, 544, 591, 1157, 1192, 1825, 1831
RseI	CAYNNNNRTG	1 cut(s)	700
SalI	GTCGAC	1 cut(s)	170
SapI	GCTCTTC	1 cut(s)	865
SaqAI	TTAA	8 cut(s)	651, 762, 1070, 1125, 1485, 1550, 1691, 1751
SatI	GCNGC	5 cut(s)	48, 144, 200, 1458, 1847
Sau3AI	GATC	6 cut(s)	315, 725, 877, 1120, 1471, 1756
Sau96I	GGNCC	9 cut(s)	108, 190, 258, 397, 1305, 1418, 1517, 1529, 1679
SchI	GAGTC	2 cut(s)	167, 1454
ScrFI	CCNGG	8 cut(s)	188, 251, 263, 567, 588, 657, 774, 1533
SduI	GDGCHC	5 cut(s)	96, 243, 288, 467, 663
SfaNI	GCATC	3 cut(s)	240, 439, 1853
SfcI	CTRYAG	2 cut(s)	481, 1377
Sfr274I	CTCGAG	1 cut(s)	951
SinI	GGWCC	5 cut(s)	258, 397, 1418, 1529, 1679
SlaI	CTCGAG	1 cut(s)	951
SmiMI	CAYNNNNRTG	1 cut(s)	700
SmlI	CTYRAG	2 cut(s)	951, 1124
SmoI	CTYRAG	2 cut(s)	951, 1124
SphI	GCATGC	1 cut(s)	1540
Sse9I	AATT	6 cut(s)	594, 926, 1067, 1386, 1692, 1818
SseBI	AGGCCT	1 cut(s)	372
SspI	AATATT	1 cut(s)	1347
SspMI	CTAG	2 cut(s)	368, 1131
StuI	AGGCCT	1 cut(s)	372
StyD4I	CCNGG	8 cut(s)	186, 249, 261, 565, 586, 655, 772, 1531
StyI	CCWWGG	3 cut(s)	459, 667, 1308
TaaI	ACNGT	6 cut(s)	169, 436, 526, 1234, 1249, 1814
TaiI	ACGT	1 cut(s)	1845
TaqI	TCGA	2 cut(s)	171, 952
TaqII	GACCGA	1 cut(s)	319
TasI	AATT	6 cut(s)	594, 926, 1067, 1386, 1692, 1818
TatI	WGTACW	4 cut(s)	219, 1156, 1824, 1830
TauI	GCSGC	2 cut(s)	50, 146
Tru1I	TTAA	8 cut(s)	651, 762, 1070, 1125, 1485, 1550, 1691, 1751
Tru9I	TTAA	8 cut(s)	651, 762, 1070, 1125, 1485, 1550, 1691, 1751
TscAI	CASTG	4 cut(s)	545, 707, 1254, 1567
TseFI	GTSAC	4 cut(s)	572, 972, 1234, 1867
TseI	GCWGC	3 cut(s)	199, 1457, 1846
Tsp45I	GTSAC	4 cut(s)	572, 972, 1234, 1867
TspGWI	ACGGA	2 cut(s)	109, 251
TspRI	CASTG	4 cut(s)	545, 707, 1254, 1567
Vha464I	CTTAAG	1 cut(s)	1124
VpaK11BI	GGWCC	5 cut(s)	258, 397, 1418, 1529, 1679
VspI	ATTAAT	1 cut(s)	1691
XagI	CCTNNNNNAGG	1 cut(s)	377
XapI	RAATTY	1 cut(s)	1818
XceI	RCATGY	1 cut(s)	1540
XcmI	CCANNNNNNNNNTGG	2 cut(s)	832, 1567
XhoI	CTCGAG	1 cut(s)	951
XmiI	GTMKAC	2 cut(s)	171, 800
XspI	CTAG	2 cut(s)	368, 1131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.