Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0014336

Physical Location & Seq

Genomic Coordinates Reverse (-)

51138576 .. 51142802

Gene Structure 4227 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00321530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGCAAGGCGCTCTCTTAACCCCAACCACCTCTACTTCCACCATCCTACTCCGACCACGGCCTCAGCCGCGGTGGAGCAGGACCACTCCTCATGTATTCTCCATCCGAGCCTCCGCCCAATCCGCCCCCAATGCCATCGCCGTCGACGAGAAGAAGCTCAACAAGTACAGCTCCCAAATCACGGAGCCCAAGTCCCAGGGCGGCTCTCAGGCCATTCTCCACGGAGTGGGGCTCTCCGAGGCCGACATGACCAAGCCCCAGATCGGCATATCCTCCGTCTGGTACGAGGGCAACACTTGCAACATGCACCTGCTGGGCCTCTCGGAGGCCGTGAAGGAAGGCGTCCAAGAGGCCGGAATGGTCGGCTTCCGGTTCAACACCGTCGGCGTCAGTGATGCTATCTCTATGGGGACTAGGGGCATGTGCTACAGCTTGCAGTCTAGGGATTTGATTGCTGATAGCATTGAGACTGTCATGGGGGCTCAGTGGTACGATGGCAATATCTCCATTCCTGGCTGTGATAAAAATATGCCAGGTACAATTATGGCAATGGGCCGGCTCAACCGACCAAGTATCATGATTTATGGGGGAACTATCAAGCCTGGGCATTTTCAAGGCAATACTTATGACATAGTATCTGCCTTTCAGGTTTATGGAGAGTATGTAAGTGGATCCATAAGTGACGAGCACAGAAAGAATGTTGTTCGTAACTCCTGTCCGGGCGCTGGGGCTTGTGGTGGAATGTATACGGCTAATACAATGGCTTGTGCCATTGAAGCTTTAGGAATGTCTATACCTTACAGCTCTTCTACACCGGCTGAAGATCCATTAAAGTTGGATGAGTGCCGCTTGGCTGGGAAATATCTGCTGGAATTATTAAAAATGGATTTAAAACCGCGAGATATTATTACTCCAAAGTCGCTACATAATGCTATGGTTACTGTCATGGCATTGGGTGGATCTACCAATGCTGTGTTACACTTAATTGCTATTGCCAGGTCTGTGGGCCTGGACTTAACTCTAGATGATTTTCAGAGAGTTAGCGATAAGGTTCCATTTCTTGCAGATCTTAAGCCTAGTGGCAAGTATGTCATGGAGGATGTACACAAGATTGGAGGAACACCAGCCGTGCTTCGCTACCTATTGGAGAATGGATTTTTACATGGGGATTGTATAACTGTAACCGGGAGGACACTGGCTGAGAATGCCAAAAGCTTCCTTCCTTTGTCTACCGGGCAGGATATAATCAGACCCTTGGAAAATCCTATCAAGAAAACAGGCCACCTCCAAGTATTATATGGAAATCTTGCACCAAAGGGTTCTGTAGCAAAGATTACAGGGAAAGAAGGGCTATACTTCTCTGGTCCAGCACTTGTCTTTGAAGGGGAGGAGGCTATGATTACAGCTATCACAGAGAATCCAATGAATTTCAAGGGAAAAGTAGTTGTTATTAGAGGAGAGGGTCCGAAGGGAGGACCAGGCATGCCTGAAATGTTAACACCTACCAGTGCAATAATGGGTGCAGGTCTTGGGAAGCTATATCACACTGCTTTGTTGACAACACAGCATTTCCTAATTATGGTCCCTTTTGGTATTGCTTTTGAGTTGCAGGAAACAGCATTGTTGACCGATGGTAGGTTTTCAGGAGGTTCACATGGATTTGTTGTTGGCCACATATGTCCTGAAGCACAGGAAGGTGGTCCTATTGGATTAATTGAAAATGGGGACATCATCACTGTTGATGTCGAAAAGAGAAGATTGGATGTTCAGTTAACAGATCAAGAGATGGACACTCGAAGAAAGAACTGGGTTGCACCTCCATACAAGGCTAACCGTGGAATTTTGTACAAGTCAGCTTCACATGTATGTGTCACAGTCTCGCAGATGAGTAGTGGAGATTGGAGGAAACGACTTGGTATAGAGATGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004160 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009507 GO:0009532 GO:0009536 GO:0009553 GO:0009555 GO:0009570 GO:0009628 GO:0009651 GO:0009987 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0019752 GO:0022622 GO:0032501 GO:0032502 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046872 GO:0046914 GO:0048229 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0071704 GO:0099402 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00290 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

ILVD_EDD

Protein Analysis

643

Amino Acids

69.18

Weight (kDa)

7.23

Isoelectric Point (pI)

35.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ILVD_EDD_N	PF00920	85 - 402	2.7e-132	Dihydroxy-acid/6-phosphogluconate dehydratase N-terminal
ILV_EDD_C	PF24877	414 - 512	1.6e-33	Dihydroxy-acid/6-phosphogluconate dehydratase C-terminal
ILV_EDD_C	PF24877	537 - 622	1.6e-28	Dihydroxy-acid/6-phosphogluconate dehydratase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014336)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23940 AT3G23940
fragaria_vesca	FvH4_7g04190
malus_domestica	MD04G1003600.v1.1
prunus_persica	Prupe.1G003100_v2.0.a1 Prupe.1G003100_v2.0.a1
pyrus_communis	pycom04g00370 pycom420g00750
rosa_chinensis	RchiOBHm_Chr1g0328531
rosa_laevigata	RLG00000029925
rosa_multiflora	Rmu_sc0001563.1_g000010
rosa_roxburghii	Rroxscaffold_4G00321530
rosa_rugosa	Rorug01G0074800
rosa_samantha	Rh1AG093500 Rh1CG090600 Rh1DG096600
rosa_wichuraiana	Rw1G007280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	318
Acc36I	ACCTGC	2 cut(s)	318, 1514
AccB7I	CCANNNNNTGG	1 cut(s)	226
AccI	GTMKAC	3 cut(s)	144, 746, 1229
AccII	CGCG	2 cut(s)	70, 898
AciI	CCGC	7 cut(s)	68, 70, 114, 123, 201, 847, 896
AclWI	GGATC	4 cut(s)	666, 679, 818, 967
AcoI	YGGCCR	1 cut(s)	1669
AcsI	RAATTY	2 cut(s)	1426, 1839
AcuI	CTGAAG	2 cut(s)	840, 1704
AcyI	GRCGYC	2 cut(s)	342, 387
AdeI	CACNNNGTG	1 cut(s)	226
AfaI	GTAC	6 cut(s)	167, 284, 491, 538, 1104, 1847
AfiI	CCNNNNNNNGG	9 cut(s)	181, 226, 263, 279, 325, 725, 1472, 1579, 1635
AflII	CTTAAG	1 cut(s)	1070
AflIII	ACRYGT	1 cut(s)	1861
AgsI	TTSAA	6 cut(s)	376, 614, 776, 1382, 1432, 1718
AjnI	CCWGG	7 cut(s)	195, 511, 532, 601, 995, 1008, 1477
AluBI	AGCT	9 cut(s)	157, 171, 432, 779, 804, 1215, 1406, 1537, 1856
AluI	AGCT	9 cut(s)	157, 171, 432, 779, 804, 1215, 1406, 1537, 1856
Alw21I	GWGCWC	1 cut(s)	690
Alw26I	GTCTC	2 cut(s)	461, 1882
AlwI	GGATC	4 cut(s)	666, 679, 818, 967
ApoI	RAATTY	2 cut(s)	1426, 1839
AseI	ATTAAT	1 cut(s)	1712
AspLEI	GCGC	2 cut(s)	11, 725
AspS9I	GGNCC	9 cut(s)	81, 316, 553, 1006, 1364, 1463, 1475, 1582, 1700
AsuC2I	CCSGG	3 cut(s)	720, 1186, 1234
AvaII	GGWCC	6 cut(s)	81, 1364, 1463, 1475, 1582, 1700
BalI	TGGCCA	1 cut(s)	1671
BamHI	GGATCC	1 cut(s)	671
BanII	GRGCYC	3 cut(s)	189, 234, 484
Bbv12I	GWGCWC	1 cut(s)	690
BbvCI	CCTCAGC	1 cut(s)	63
BccI	CCATC	7 cut(s)	50, 110, 143, 488, 1625, 1780, 1918
BceAI	ACGGC	5 cut(s)	74, 125, 314, 765, 1112
BciT130I	CCWGG	7 cut(s)	197, 513, 534, 603, 997, 1010, 1479
BcnI	CCSGG	3 cut(s)	720, 1186, 1234
BcoDI	GTCTC	2 cut(s)	461, 1882
BfaI	CTAG	4 cut(s)	414, 441, 1022, 1077
BfmI	CTRYAG	2 cut(s)	427, 1323
BfoI	RGCGCY	2 cut(s)	12, 726
BfrI	CTTAAG	1 cut(s)	1070
BfuAI	ACCTGC	2 cut(s)	318, 1514
BglII	AGATCT	1 cut(s)	1066
BisI	GCNGC	3 cut(s)	68, 202, 847
BlsI	GCNGC	3 cut(s)	69, 203, 848
Bme18I	GGWCC	6 cut(s)	81, 1364, 1463, 1475, 1582, 1700
BmgT120I	GGNCC	9 cut(s)	81, 316, 553, 1006, 1364, 1463, 1475, 1582, 1700
BmiI	GGNNCC	5 cut(s)	186, 673, 1053, 1464, 1584
BmrI	ACTGGG	1 cut(s)	1816
BmsI	GCATC	1 cut(s)	385
BmuI	ACTGGG	1 cut(s)	1816
BplI	GAGNNNNNCTC	2 cut(s)	216, 248
Bpu10I	CCTNAGC	1 cut(s)	63
BpuMI	CCSGG	3 cut(s)	720, 1186, 1234
BsaHI	GRCGYC	2 cut(s)	342, 387
BsaJI	CCNNGG	9 cut(s)	56, 68, 195, 196, 220, 237, 602, 1254, 1834
BsaWI	WCCGGW	1 cut(s)	369
BsaXI	ACNNNNNCTCC	4 cut(s)	176, 206, 648, 678
Bsc4I	CCNNNNNNNGG	9 cut(s)	181, 226, 263, 279, 325, 725, 1472, 1579, 1635
Bse118I	RCCGGY	2 cut(s)	555, 814
Bse1I	ACTGG	3 cut(s)	1200, 1506, 1811
Bse3DI	GCAATG	1 cut(s)	555
BseBI	CCWGG	7 cut(s)	197, 513, 534, 603, 997, 1010, 1479
BseDI	CCNNGG	9 cut(s)	56, 68, 195, 196, 220, 237, 602, 1254, 1834
BseGI	GGATG	5 cut(s)	42, 102, 844, 1105, 1768
BseLI	CCNNNNNNNGG	9 cut(s)	181, 226, 263, 279, 325, 725, 1472, 1579, 1635
BseMI	GCAATG	1 cut(s)	555
BseMII	CTCAG	4 cut(s)	77, 221, 497, 1191
BseNI	ACTGG	3 cut(s)	1200, 1506, 1811
BseRI	GAGGAG	3 cut(s)	78, 1403, 1470
BseYI	CCCAGC	3 cut(s)	313, 725, 854
BsgI	GTGCAG	1 cut(s)	1542
Bsh1236I	CGCG	2 cut(s)	70, 898
BsiHKAI	GWGCWC	1 cut(s)	690
BsiSI	CCGG	7 cut(s)	354, 370, 556, 719, 815, 1185, 1233
BslFI	GGGAC	4 cut(s)	178, 424, 1568, 1739
BslI	CCNNNNNNNGG	9 cut(s)	181, 226, 263, 279, 325, 725, 1472, 1579, 1635
BsmAI	GTCTC	2 cut(s)	461, 1882
BsmFI	GGGAC	4 cut(s)	178, 424, 1568, 1739
BsmI	GAATGC	1 cut(s)	1210
Bsp1286I	GDGCHC	4 cut(s)	189, 234, 484, 690
Bsp1407I	TGTACA	2 cut(s)	1102, 1845
Bsp143I	GATC	6 cut(s)	261, 671, 823, 959, 1066, 1777
BspACI	CCGC	7 cut(s)	68, 70, 114, 123, 201, 847, 896
BspCNI	CTCAG	4 cut(s)	76, 220, 496, 1192
BspFNI	CGCG	2 cut(s)	70, 898
BspHI	TCATGA	1 cut(s)	576
BspLI	GGNNCC	5 cut(s)	186, 673, 1053, 1464, 1584
BspMI	ACCTGC	2 cut(s)	318, 1514
BspPI	GGATC	4 cut(s)	666, 679, 818, 967
BspQI	GCTCTTC	1 cut(s)	811
BspTI	CTTAAG	1 cut(s)	1070
BsrDI	GCAATG	1 cut(s)	555
BsrFI	RCCGGY	2 cut(s)	555, 814
BsrGI	TGTACA	2 cut(s)	1102, 1845
BsrI	ACTGG	3 cut(s)	1200, 1506, 1811
BssAI	RCCGGY	2 cut(s)	555, 814
BssECI	CCNNGG	9 cut(s)	56, 68, 195, 196, 220, 237, 602, 1254, 1834
BssMI	GATC	6 cut(s)	261, 671, 823, 959, 1066, 1777
BssNAI	GTATAC	1 cut(s)	747
BssNI	GRCGYC	2 cut(s)	342, 387
BssT1I	CCWWGG	1 cut(s)	1254
Bst1107I	GTATAC	1 cut(s)	747
Bst2UI	CCWGG	7 cut(s)	197, 513, 534, 603, 997, 1010, 1479
Bst4CI	ACNGT	7 cut(s)	382, 472, 943, 1180, 1738, 1835, 1876
Bst6I	CTCTTC	1 cut(s)	811
BstACI	GRCGYC	2 cut(s)	342, 387
BstAFI	CTTAAG	1 cut(s)	1070
BstAPI	GCANNNNNTGC	1 cut(s)	297
BstAUI	TGTACA	2 cut(s)	1102, 1845
BstC8I	GCNNGC	3 cut(s)	434, 557, 1484
BstDEI	CTNAG	4 cut(s)	63, 207, 483, 1200
BstDSI	CCRYGG	4 cut(s)	56, 68, 220, 1834
BstENI	CCTNNNNNAGG	1 cut(s)	323
BstF5I	GGATG	5 cut(s)	42, 102, 844, 1105, 1768
BstFNI	CGCG	2 cut(s)	70, 898
BstH2I	RGCGCY	2 cut(s)	12, 726
BstHHI	GCGC	2 cut(s)	11, 725
BstKTI	GATC	6 cut(s)	264, 674, 826, 962, 1069, 1780
BstMAI	GTCTC	2 cut(s)	461, 1882
BstMBI	GATC	6 cut(s)	261, 671, 823, 959, 1066, 1777
BstMWI	GCNNNNNNNGC	6 cut(s)	67, 122, 131, 297, 776, 1205
BstNI	CCWGG	7 cut(s)	197, 513, 534, 603, 997, 1010, 1479
BstNSI	RCATGY	4 cut(s)	307, 424, 1486, 1865
BstSFI	CTRYAG	2 cut(s)	427, 1323
BstUI	CGCG	2 cut(s)	70, 898
BstX2I	RGATCY	4 cut(s)	671, 823, 959, 1066
BstXI	CCANNNNNNTGG	1 cut(s)	1003
BstYI	RGATCY	4 cut(s)	671, 823, 959, 1066
BstZ17I	GTATAC	1 cut(s)	747
BtgI	CCRYGG	4 cut(s)	56, 68, 220, 1834
BtgZI	GCGATG	1 cut(s)	121
BtsCI	GGATG	5 cut(s)	42, 102, 844, 1105, 1768
BtsI	GCAGTG	1 cut(s)	1545
BtsIMutI	CAGTG	6 cut(s)	397, 491, 1193, 1513, 1545, 1734
BveI	ACCTGC	2 cut(s)	318, 1514
Cac8I	GCNNGC	3 cut(s)	434, 557, 1484
CciI	TCATGA	1 cut(s)	576
CfoI	GCGC	2 cut(s)	11, 725
Cfr10I	RCCGGY	2 cut(s)	555, 814
Cfr13I	GGNCC	9 cut(s)	81, 316, 553, 1006, 1364, 1463, 1475, 1582, 1700
Cfr42I	CCGCGG	1 cut(s)	71
CseI	GACGC	2 cut(s)	331, 376
Csp6I	GTAC	6 cut(s)	166, 283, 490, 537, 1103, 1846
CviQI	GTAC	6 cut(s)	166, 283, 490, 537, 1103, 1846
DdeI	CTNAG	4 cut(s)	63, 207, 483, 1200
DpnI	GATC	6 cut(s)	263, 673, 825, 961, 1068, 1779
DpnII	GATC	6 cut(s)	261, 671, 823, 959, 1066, 1777
DraI	TTTAAA	1 cut(s)	891
DraIII	CACNNNGTG	1 cut(s)	226
EaeI	YGGCCR	1 cut(s)	1669
Eam1104I	CTCTTC	1 cut(s)	811
EarI	CTCTTC	1 cut(s)	811
EciI	GGCGGA	2 cut(s)	103, 112
Eco130I	CCWWGG	1 cut(s)	1254
Eco24I	GRGCYC	3 cut(s)	189, 234, 484
Eco47I	GGWCC	6 cut(s)	81, 1364, 1463, 1475, 1582, 1700
Eco57I	CTGAAG	2 cut(s)	840, 1704
EcoNI	CCTNNNNNAGG	1 cut(s)	323
EcoRII	CCWGG	7 cut(s)	195, 511, 532, 601, 995, 1008, 1477
EcoT14I	CCWWGG	1 cut(s)	1254
EcoT38I	GRGCYC	3 cut(s)	189, 234, 484
ErhI	CCWWGG	1 cut(s)	1254
FaqI	GGGAC	4 cut(s)	178, 424, 1568, 1739
FauNDI	CATATG	1 cut(s)	1676
FblI	GTMKAC	3 cut(s)	144, 746, 1229
Fnu4HI	GCNGC	3 cut(s)	68, 202, 847
FokI	GGATG	5 cut(s)	29, 89, 851, 1112, 1775
FriOI	GRGCYC	3 cut(s)	189, 234, 484
Fsp4HI	GCNGC	3 cut(s)	68, 202, 847
FspBI	CTAG	4 cut(s)	414, 441, 1022, 1077
GlaI	GCGC	2 cut(s)	10, 724
GluI	GCNGC	3 cut(s)	68, 202, 847
GsaI	CCCAGC	3 cut(s)	317, 729, 858
HaeII	RGCGCY	2 cut(s)	12, 726
HapII	CCGG	7 cut(s)	354, 370, 556, 719, 815, 1185, 1233
HgaI	GACGC	2 cut(s)	331, 376
HhaI	GCGC	2 cut(s)	11, 725
Hin1I	GRCGYC	2 cut(s)	342, 387
Hin6I	GCGC	2 cut(s)	9, 723
HinP1I	GCGC	2 cut(s)	9, 723
HincII	GTYRAC	5 cut(s)	145, 1497, 1557, 1626, 1773
HindII	GTYRAC	5 cut(s)	145, 1497, 1557, 1626, 1773
HindIII	AAGCTT	2 cut(s)	777, 1213
HinfI	GANTC	1 cut(s)	1417
HpaI	GTTAAC	2 cut(s)	1497, 1773
HpaII	CCGG	7 cut(s)	354, 370, 556, 719, 815, 1185, 1233
Hpy166II	GTNNAC	9 cut(s)	145, 747, 1105, 1230, 1497, 1557, 1626, 1652, 1773
Hpy188I	TCNGA	7 cut(s)	53, 107, 238, 325, 1035, 1250, 1467
Hpy188III	TCNNGA	6 cut(s)	577, 1022, 1270, 1644, 1682, 1781
Hpy8I	GTNNAC	9 cut(s)	145, 747, 1105, 1230, 1497, 1557, 1626, 1652, 1773
Hpy99I	CGWCG	3 cut(s)	146, 149, 386
HpyAV	CCTTC	7 cut(s)	328, 332, 1229, 1340, 1376, 1462, 1688
HpyCH4III	ACNGT	7 cut(s)	382, 472, 943, 1180, 1738, 1835, 1876
HpyF10VI	GCNNNNNNNGC	6 cut(s)	67, 122, 131, 297, 776, 1205
HpyF3I	CTNAG	4 cut(s)	63, 207, 483, 1200
Hsp92I	GRCGYC	2 cut(s)	342, 387
HspAI	GCGC	2 cut(s)	9, 723
KroI	GCCGGC	1 cut(s)	555
KroNI	GCCGGC	1 cut(s)	557
KspAI	GTTAAC	2 cut(s)	1497, 1773
KspI	CCGCGG	1 cut(s)	71
Kzo9I	GATC	6 cut(s)	261, 671, 823, 959, 1066, 1777
LguI	GCTCTTC	1 cut(s)	811
LmnI	GCTCC	3 cut(s)	75, 176, 184
LweI	GCATC	1 cut(s)	385
MaeI	CTAG	4 cut(s)	414, 441, 1022, 1077
MaeIII	GTNAC	6 cut(s)	680, 707, 937, 975, 1180, 1870
MalI	GATC	6 cut(s)	263, 673, 825, 961, 1068, 1779
MboI	GATC	6 cut(s)	261, 671, 823, 959, 1066, 1777
MboII	GAAGA	5 cut(s)	163, 798, 833, 1767, 1809
MflI	RGATCY	4 cut(s)	671, 823, 959, 1066
MhlI	GDGCHC	4 cut(s)	189, 234, 484, 690
MlsI	TGGCCA	1 cut(s)	1671
MluCI	AATT	7 cut(s)	540, 872, 984, 1426, 1575, 1713, 1839
MluNI	TGGCCA	1 cut(s)	1671
MmeI	TCCRAC	2 cut(s)	76, 816
Mox20I	TGGCCA	1 cut(s)	1671
MroNI	GCCGGC	1 cut(s)	555
MscI	TGGCCA	1 cut(s)	1671
MslI	CAYNNNNRTG	2 cut(s)	1864, 1866
Msp20I	TGGCCA	1 cut(s)	1671
MspA1I	CMGCKG	1 cut(s)	70
MspCI	CTTAAG	1 cut(s)	1070
MspI	CCGG	7 cut(s)	354, 370, 556, 719, 815, 1185, 1233
Mva1269I	GAATGC	1 cut(s)	1210
MvaI	CCWGG	7 cut(s)	197, 513, 534, 603, 997, 1010, 1479
MvnI	CGCG	2 cut(s)	70, 898
MwoI	GCNNNNNNNGC	6 cut(s)	67, 122, 131, 297, 776, 1205
NaeI	GCCGGC	1 cut(s)	557
NciI	CCSGG	3 cut(s)	720, 1186, 1234
NdeI	CATATG	1 cut(s)	1676
NdeII	GATC	6 cut(s)	261, 671, 823, 959, 1066, 1777
NgoMIV	GCCGGC	1 cut(s)	555
NlaIV	GGNNCC	5 cut(s)	186, 673, 1053, 1464, 1584
NmuCI	GTSAC	2 cut(s)	680, 1870
NspI	RCATGY	4 cut(s)	307, 424, 1486, 1865
PaeI	GCATGC	1 cut(s)	1486
PagI	TCATGA	1 cut(s)	576
PaqCI	CACCTGC	1 cut(s)	318
PasI	CCCWGGG	1 cut(s)	196
PciI	ACATGT	1 cut(s)	1861
PciSI	GCTCTTC	1 cut(s)	811
PcsI	WCGNNNNNNNCGW	1 cut(s)	144
PctI	GAATGC	1 cut(s)	1210
PdiI	GCCGGC	1 cut(s)	557
PfeI	GAWTC	1 cut(s)	1417
PflMI	CCANNNNNTGG	1 cut(s)	226
PkrI	GCNGC	3 cut(s)	69, 203, 848
PscI	ACATGT	1 cut(s)	1861
PshBI	ATTAAT	1 cut(s)	1712
Psp6I	CCWGG	7 cut(s)	195, 511, 532, 601, 995, 1008, 1477
PspFI	CCCAGC	3 cut(s)	313, 725, 854
PspGI	CCWGG	7 cut(s)	195, 511, 532, 601, 995, 1008, 1477
PspN4I	GGNNCC	5 cut(s)	186, 673, 1053, 1464, 1584
PspPI	GGNCC	9 cut(s)	81, 316, 553, 1006, 1364, 1463, 1475, 1582, 1700
PsuI	RGATCY	4 cut(s)	671, 823, 959, 1066
RsaI	GTAC	6 cut(s)	167, 284, 491, 538, 1104, 1847
RsaNI	GTAC	6 cut(s)	166, 283, 490, 537, 1103, 1846
RseI	CAYNNNNRTG	2 cut(s)	1864, 1866
SacII	CCGCGG	1 cut(s)	71
SalI	GTCGAC	1 cut(s)	143
SapI	GCTCTTC	1 cut(s)	811
SatI	GCNGC	3 cut(s)	68, 202, 847
Sau3AI	GATC	6 cut(s)	261, 671, 823, 959, 1066, 1777
Sau96I	GGNCC	9 cut(s)	81, 316, 553, 1006, 1364, 1463, 1475, 1582, 1700
SduI	GDGCHC	4 cut(s)	189, 234, 484, 690
SfaNI	GCATC	1 cut(s)	385
SfcI	CTRYAG	2 cut(s)	427, 1323
Sfr303I	CCGCGG	1 cut(s)	71
SgrBI	CCGCGG	1 cut(s)	71
SgrDI	CGTCGACG	1 cut(s)	143
SinI	GGWCC	6 cut(s)	81, 1364, 1463, 1475, 1582, 1700
SmiMI	CAYNNNNRTG	2 cut(s)	1864, 1866
SmlI	CTYRAG	1 cut(s)	1070
SmoI	CTYRAG	1 cut(s)	1070
SphI	GCATGC	1 cut(s)	1486
Sse9I	AATT	7 cut(s)	540, 872, 984, 1426, 1575, 1713, 1839
SsiI	CCGC	7 cut(s)	68, 70, 114, 123, 201, 847, 896
SspMI	CTAG	4 cut(s)	414, 441, 1022, 1077
StyI	CCWWGG	1 cut(s)	1254
TaaI	ACNGT	7 cut(s)	382, 472, 943, 1180, 1738, 1835, 1876
TaqI	TCGA	3 cut(s)	144, 1746, 1795
TaqII	GACCGA	1 cut(s)	1643
TasI	AATT	7 cut(s)	540, 872, 984, 1426, 1575, 1713, 1839
TatI	WGTACW	3 cut(s)	165, 1102, 1845
TauI	GCSGC	3 cut(s)	70, 204, 849
TfiI	GAWTC	1 cut(s)	1417
TscAI	CASTG	6 cut(s)	397, 491, 1200, 1513, 1552, 1741
TseFI	GTSAC	2 cut(s)	680, 1870
Tsp45I	GTSAC	2 cut(s)	680, 1870
TspDTI	ATGAA	1 cut(s)	1439
TspGWI	ACGGA	3 cut(s)	197, 237, 265
TspRI	CASTG	6 cut(s)	397, 491, 1200, 1513, 1552, 1741
Van91I	CCANNNNNTGG	1 cut(s)	226
Vha464I	CTTAAG	1 cut(s)	1070
VpaK11BI	GGWCC	6 cut(s)	81, 1364, 1463, 1475, 1582, 1700
VspI	ATTAAT	1 cut(s)	1712
XagI	CCTNNNNNAGG	1 cut(s)	323
XapI	RAATTY	2 cut(s)	1426, 1839
XbaI	TCTAGA	1 cut(s)	1021
XceI	RCATGY	4 cut(s)	307, 424, 1486, 1865
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1295, 1513
XmiI	GTMKAC	3 cut(s)	144, 746, 1229
XspI	CTAG	4 cut(s)	414, 441, 1022, 1077

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.