Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0014336

Physical Location & Seq

Genomic Coordinates Forward (+)

18255096 .. 18259122

Gene Structure 4027 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG096600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGCAAGGCGCTCTCATTAGCTCTACTTCCACCATCCTACTCCGCCCACCGCCTCAGCCGCGGTGGAGCAGGACCACTCCTCATGTATTCTCCATCCGAGCCTCCGCCCAAACCGCCCCCAATGCCGTCGCCGTCGACGAGAAGAAGCTCAACAAGTACAGCTCCCAAATCACGGATCCCAAGTCCCAGGGAGGCTCTCAGGCCATTCTCTACGGAGTGGGACTCTCCGACGCCGACATGACCAAGCCCCAGATCGGCATATCCTCCGTCTGGTACGAGGGCAACACTTGCAACATGCACCTGCTGGGCCTCTCGGAGGCCGTGAAGGAAGGCGTCCAAGAGGCCGGAATGGTCGGCTTCCGGTTCAACACCGTCGGCGTCAGTGATGCTATCTCTATGGGGACTAGGGGCATGTGCTACAGCTTGCAGTCTAGGGATTTGATTGCTGATAGCATTGAGACTGTCATGGGGGCTCAGTGGTACGATGGCAATATCTCCATTCCTGGCTGTGACAAAAATATGCCAGGTACTATTATGGCAATGGGCCGGCTCAACCGACCAAATAATTCTACTTCAAAAGCATTAGAAATTGTTTACAATGTGAAGTTCACGTATTCAATTTATGGAGAGTATGTAAGTGGATCCATAAGTGATGAGCACAGAAAGAATGTTGTTCGTAACTCCTGTCCGGGCGCTGGGGCTTGTGGTGGAATGTATACGGCTAATACAATGGCTTGTGCCATTGAAGCTTTAGGAATGTCTATACCTTACAGCTCTTCTACACCGGCTGAAGATCCATTAAAGTTGGATGAGTGCCGCTTGGCTGGGAAATATCTGCTGGAATTATTAAAAATGGATTTAAAACCGCGAGATATTATTACTCCAAAGTCGCTACATAATGCTATGGTTACTGTCATGGCATTGGGTGGATCTACCAATGCTGTGTTACACTTAATTGCTATTGCCAGGTCTGTGGGCCTGGACTTAACTCTAGATGATTTTCAGAGAGTTAGCGATAAGGTTCCATTTCTTGCAGATCTTAAGCCTAGTGGCAAGTATGTCATGGAGGATGTACACAAGATTGGAGGAACACCAGCCGTGCTTCGCTACCTATTGGAGAATGGACTTTTACATGGGGATTGTATAACTGTAACCGGGAGGACACTGGCTGAGAATGCCAAAAGCTTCCTTCCTTTGTCTACTGGGCAGGATATAATCAGACCCTTGGAAAATCCTATCAAGAAAACAGGCCACCTCCAAGTATTATATGGAAATCTTGCACCAAAGGGTTCTGTAGCAAAGATTACAGGGAAAGAAGGGCTATACTTCTCTGGTCCAGCACTTGTCTTTGAAGGGGAGGAGGCTATGATTGCAGCTATAACAGAGAATCCAATGAATTTCAAGGGAAAAGTAGTTGTTATTAGAGGAGAGGGTCCGAAGGGAGGACCAGGCATGCCTGAAATGTTGACACCTACCAGTGCAATAATGGGTGCAGGTCTTGGGAAGGAAACAGCATTGTTGACCGATGGTAGGTTTTCAGGAGGTTCACATGGATTTGTTGTTGGCCACATATGTCCTGAAGCACAGGAAGGTGGTCCTATTGGATTAATTGAAAACGGGGACATCATCACCGTTGATGTCGAAAAGAGAAGATTGGATGTTCAGTTAACAGATCAAGAGATGGACACTCGAAGAAAGAACTGGGTTGCACCTCCATACAAGGCTAACCGTGGAATTTTGTACAAGTATATCAAGAATGTACAATCAGCTTCAAATGGATGCGTGACGGATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004160 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009507 GO:0009532 GO:0009536 GO:0009553 GO:0009555 GO:0009570 GO:0009628 GO:0009651 GO:0009987 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0019752 GO:0022622 GO:0032501 GO:0032502 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046872 GO:0046914 GO:0048229 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0071704 GO:0099402 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00290 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

ILVD_EDD

Protein Analysis

598

Amino Acids

64.1

Weight (kDa)

6.81

Isoelectric Point (pI)

33.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ILVD_EDD_N	PF00920	82 - 392	1.5e-121	Dihydroxy-acid/6-phosphogluconate dehydratase N-terminal
ILV_EDD_C	PF24877	404 - 594	5.7e-74	Dihydroxy-acid/6-phosphogluconate dehydratase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014336)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23940 AT3G23940
fragaria_vesca	FvH4_7g04190
malus_domestica	MD04G1003600.v1.1
prunus_persica	Prupe.1G003100_v2.0.a1 Prupe.1G003100_v2.0.a1
pyrus_communis	pycom04g00370 pycom420g00750
rosa_chinensis	RchiOBHm_Chr1g0328531
rosa_laevigata	RLG00000029925
rosa_multiflora	Rmu_sc0001563.1_g000010
rosa_roxburghii	Rroxscaffold_4G00321530
rosa_rugosa	Rorug01G0074800
rosa_samantha	Rh1AG093500 Rh1CG090600 Rh1DG096600
rosa_wichuraiana	Rw1G007280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	309
Acc36I	ACCTGC	2 cut(s)	309, 1484
AccI	GTMKAC	3 cut(s)	135, 716, 1199
AccII	CGCG	2 cut(s)	61, 868
AciI	CCGC	8 cut(s)	43, 50, 59, 61, 105, 114, 817, 866
AclWI	GGATC	6 cut(s)	170, 183, 636, 649, 788, 937
AcoI	YGGCCR	1 cut(s)	1564
AcsI	RAATTY	2 cut(s)	1396, 1734
AcuI	CTGAAG	2 cut(s)	810, 1599
AcyI	GRCGYC	3 cut(s)	231, 333, 378
AfaI	GTAC	7 cut(s)	158, 275, 482, 529, 1074, 1742, 1761
AfiI	CCNNNNNNNGG	7 cut(s)	172, 254, 270, 316, 695, 1442, 1530
AflII	CTTAAG	1 cut(s)	1040
AgsI	TTSAA	8 cut(s)	367, 576, 618, 746, 1352, 1402, 1613, 1773
AjnI	CCWGG	6 cut(s)	186, 502, 523, 965, 978, 1447
AluBI	AGCT	9 cut(s)	21, 148, 162, 423, 749, 774, 1185, 1376, 1769
AluI	AGCT	9 cut(s)	21, 148, 162, 423, 749, 774, 1185, 1376, 1769
Alw21I	GWGCWC	1 cut(s)	660
Alw26I	GTCTC	1 cut(s)	452
AlwI	GGATC	6 cut(s)	170, 183, 636, 649, 788, 937
AoxI	GGCC	8 cut(s)	201, 307, 318, 342, 544, 976, 1249, 1564
ApeKI	GCWGC	1 cut(s)	1373
ApoI	RAATTY	2 cut(s)	1396, 1734
AseI	ATTAAT	1 cut(s)	1607
AspLEI	GCGC	2 cut(s)	11, 695
AspS9I	GGNCC	8 cut(s)	72, 307, 544, 976, 1334, 1433, 1445, 1595
AsuC2I	CCSGG	2 cut(s)	690, 1156
AsuHPI	GGTGA	1 cut(s)	1621
AvaII	GGWCC	5 cut(s)	72, 1334, 1433, 1445, 1595
BalI	TGGCCA	1 cut(s)	1566
BamHI	GGATCC	2 cut(s)	175, 641
BanII	GRGCYC	1 cut(s)	475
Bbv12I	GWGCWC	1 cut(s)	660
BbvCI	CCTCAGC	1 cut(s)	54
BbvI	GCAGC	1 cut(s)	1385
BccI	CCATC	5 cut(s)	41, 101, 479, 1520, 1675
BceAI	ACGGC	5 cut(s)	110, 116, 305, 735, 1082
BciT130I	CCWGG	6 cut(s)	188, 504, 525, 967, 980, 1449
BcnI	CCSGG	2 cut(s)	690, 1156
BcoDI	GTCTC	1 cut(s)	452
BfaI	CTAG	4 cut(s)	405, 432, 992, 1047
BfmI	CTRYAG	2 cut(s)	418, 1293
BfoI	RGCGCY	2 cut(s)	12, 696
BfrI	CTTAAG	1 cut(s)	1040
BfuAI	ACCTGC	2 cut(s)	309, 1484
BglII	AGATCT	1 cut(s)	1036
BisI	GCNGC	3 cut(s)	59, 817, 1374
BlsI	GCNGC	3 cut(s)	60, 818, 1375
Bme1390I	CCNGG	8 cut(s)	188, 504, 525, 690, 967, 980, 1156, 1449
Bme18I	GGWCC	5 cut(s)	72, 1334, 1433, 1445, 1595
BmgT120I	GGNCC	8 cut(s)	72, 307, 544, 976, 1334, 1433, 1445, 1595
BmiI	GGNNCC	4 cut(s)	177, 643, 1023, 1434
BmrFI	CCNGG	8 cut(s)	188, 504, 525, 690, 967, 980, 1156, 1449
BmrI	ACTGGG	2 cut(s)	1212, 1711
BmsI	GCATC	2 cut(s)	376, 1769
BmuI	ACTGGG	2 cut(s)	1212, 1711
BplI	GAGNNNNNCTC	2 cut(s)	207, 239
Bpu10I	CCTNAGC	1 cut(s)	54
BpuMI	CCSGG	2 cut(s)	690, 1156
BsaAI	YACGTR	1 cut(s)	612
BsaHI	GRCGYC	3 cut(s)	231, 333, 378
BsaJI	CCNNGG	5 cut(s)	59, 186, 187, 1224, 1729
BsaWI	WCCGGW	1 cut(s)	360
BsaXI	ACNNNNNCTCC	2 cut(s)	618, 648
Bsc4I	CCNNNNNNNGG	7 cut(s)	172, 254, 270, 316, 695, 1442, 1530
Bse118I	RCCGGY	2 cut(s)	546, 784
Bse1I	ACTGG	4 cut(s)	1170, 1207, 1476, 1706
Bse3DI	GCAATG	1 cut(s)	546
BseBI	CCWGG	6 cut(s)	188, 504, 525, 967, 980, 1449
BseDI	CCNNGG	5 cut(s)	59, 186, 187, 1224, 1729
BseGI	GGATG	7 cut(s)	33, 93, 814, 1075, 1663, 1784, 1795
BseLI	CCNNNNNNNGG	7 cut(s)	172, 254, 270, 316, 695, 1442, 1530
BseMI	GCAATG	1 cut(s)	546
BseMII	CTCAG	4 cut(s)	68, 212, 488, 1161
BseNI	ACTGG	4 cut(s)	1170, 1207, 1476, 1706
BseRI	GAGGAG	3 cut(s)	69, 1373, 1440
BseXI	GCAGC	1 cut(s)	1385
BseYI	CCCAGC	3 cut(s)	304, 695, 824
BsgI	GTGCAG	1 cut(s)	1512
Bsh1236I	CGCG	2 cut(s)	61, 868
BshFI	GGCC	8 cut(s)	203, 309, 320, 344, 546, 978, 1251, 1566
BsiHKAI	GWGCWC	1 cut(s)	660
BsiSI	CCGG	6 cut(s)	345, 361, 547, 689, 785, 1155
BslFI	GGGAC	4 cut(s)	169, 234, 415, 1634
BslI	CCNNNNNNNGG	7 cut(s)	172, 254, 270, 316, 695, 1442, 1530
BsmAI	GTCTC	1 cut(s)	452
BsmFI	GGGAC	4 cut(s)	169, 234, 415, 1634
BsmI	GAATGC	1 cut(s)	1180
BsnI	GGCC	8 cut(s)	203, 309, 320, 344, 546, 978, 1251, 1566
Bsp1286I	GDGCHC	2 cut(s)	475, 660
Bsp1407I	TGTACA	3 cut(s)	1072, 1740, 1759
Bsp143I	GATC	7 cut(s)	175, 252, 641, 793, 929, 1036, 1672
BspACI	CCGC	8 cut(s)	43, 50, 59, 61, 105, 114, 817, 866
BspANI	GGCC	8 cut(s)	203, 309, 320, 344, 546, 978, 1251, 1566
BspCNI	CTCAG	4 cut(s)	67, 211, 487, 1162
BspFNI	CGCG	2 cut(s)	61, 868
BspLI	GGNNCC	4 cut(s)	177, 643, 1023, 1434
BspMI	ACCTGC	2 cut(s)	309, 1484
BspPI	GGATC	6 cut(s)	170, 183, 636, 649, 788, 937
BspQI	GCTCTTC	1 cut(s)	781
BspTI	CTTAAG	1 cut(s)	1040
BsrDI	GCAATG	1 cut(s)	546
BsrFI	RCCGGY	2 cut(s)	546, 784
BsrGI	TGTACA	3 cut(s)	1072, 1740, 1759
BsrI	ACTGG	4 cut(s)	1170, 1207, 1476, 1706
BssAI	RCCGGY	2 cut(s)	546, 784
BssECI	CCNNGG	5 cut(s)	59, 186, 187, 1224, 1729
BssMI	GATC	7 cut(s)	175, 252, 641, 793, 929, 1036, 1672
BssNAI	GTATAC	1 cut(s)	717
BssNI	GRCGYC	3 cut(s)	231, 333, 378
BssT1I	CCWWGG	1 cut(s)	1224
Bst1107I	GTATAC	1 cut(s)	717
Bst2UI	CCWGG	6 cut(s)	188, 504, 525, 967, 980, 1449
Bst4CI	ACNGT	6 cut(s)	373, 463, 913, 1150, 1633, 1730
Bst6I	CTCTTC	1 cut(s)	781
BstACI	GRCGYC	3 cut(s)	231, 333, 378
BstAFI	CTTAAG	1 cut(s)	1040
BstAPI	GCANNNNNTGC	1 cut(s)	288
BstAUI	TGTACA	3 cut(s)	1072, 1740, 1759
BstBAI	YACGTR	1 cut(s)	612
BstC8I	GCNNGC	3 cut(s)	425, 548, 1454
BstDEI	CTNAG	4 cut(s)	54, 198, 474, 1170
BstDSI	CCRYGG	2 cut(s)	59, 1729
BstENI	CCTNNNNNAGG	1 cut(s)	314
BstF5I	GGATG	7 cut(s)	33, 93, 814, 1075, 1663, 1784, 1795
BstFNI	CGCG	2 cut(s)	61, 868
BstH2I	RGCGCY	2 cut(s)	12, 696
BstHHI	GCGC	2 cut(s)	11, 695
BstKTI	GATC	7 cut(s)	178, 255, 644, 796, 932, 1039, 1675
BstMAI	GTCTC	1 cut(s)	452
BstMBI	GATC	7 cut(s)	175, 252, 641, 793, 929, 1036, 1672
BstMWI	GCNNNNNNNGC	7 cut(s)	58, 113, 122, 288, 746, 1175, 1370
BstNI	CCWGG	6 cut(s)	188, 504, 525, 967, 980, 1449
BstNSI	RCATGY	3 cut(s)	298, 415, 1456
BstSCI	CCNGG	8 cut(s)	186, 502, 523, 688, 965, 978, 1154, 1447
BstSFI	CTRYAG	2 cut(s)	418, 1293
BstUI	CGCG	2 cut(s)	61, 868
BstV1I	GCAGC	1 cut(s)	1385
BstX2I	RGATCY	5 cut(s)	175, 641, 793, 929, 1036
BstXI	CCANNNNNNTGG	1 cut(s)	973
BstYI	RGATCY	5 cut(s)	175, 641, 793, 929, 1036
BstZ17I	GTATAC	1 cut(s)	717
BsuRI	GGCC	8 cut(s)	203, 309, 320, 344, 546, 978, 1251, 1566
BtgI	CCRYGG	2 cut(s)	59, 1729
BtsCI	GGATG	7 cut(s)	33, 93, 814, 1075, 1663, 1784, 1795
BtsIMutI	CAGTG	4 cut(s)	388, 482, 1163, 1483
BveI	ACCTGC	2 cut(s)	309, 1484
Cac8I	GCNNGC	3 cut(s)	425, 548, 1454
CfoI	GCGC	2 cut(s)	11, 695
Cfr10I	RCCGGY	2 cut(s)	546, 784
Cfr13I	GGNCC	8 cut(s)	72, 307, 544, 976, 1334, 1433, 1445, 1595
Cfr42I	CCGCGG	1 cut(s)	62
CseI	GACGC	3 cut(s)	239, 322, 367
Csp6I	GTAC	7 cut(s)	157, 274, 481, 528, 1073, 1741, 1760
CviQI	GTAC	7 cut(s)	157, 274, 481, 528, 1073, 1741, 1760
DdeI	CTNAG	4 cut(s)	54, 198, 474, 1170
DpnI	GATC	7 cut(s)	177, 254, 643, 795, 931, 1038, 1674
DpnII	GATC	7 cut(s)	175, 252, 641, 793, 929, 1036, 1672
DraI	TTTAAA	1 cut(s)	861
EaeI	YGGCCR	1 cut(s)	1564
Eam1104I	CTCTTC	1 cut(s)	781
EarI	CTCTTC	1 cut(s)	781
EciI	GGCGGA	2 cut(s)	32, 94
Eco130I	CCWWGG	1 cut(s)	1224
Eco24I	GRGCYC	1 cut(s)	475
Eco47I	GGWCC	5 cut(s)	72, 1334, 1433, 1445, 1595
Eco57I	CTGAAG	2 cut(s)	810, 1599
EcoNI	CCTNNNNNAGG	1 cut(s)	314
EcoRII	CCWGG	6 cut(s)	186, 502, 523, 965, 978, 1447
EcoT14I	CCWWGG	1 cut(s)	1224
EcoT38I	GRGCYC	1 cut(s)	475
ErhI	CCWWGG	1 cut(s)	1224
FaqI	GGGAC	4 cut(s)	169, 234, 415, 1634
FauNDI	CATATG	1 cut(s)	1571
FblI	GTMKAC	3 cut(s)	135, 716, 1199
Fnu4HI	GCNGC	3 cut(s)	59, 817, 1374
FokI	GGATG	6 cut(s)	20, 80, 821, 1082, 1670, 1791
FriOI	GRGCYC	1 cut(s)	475
Fsp4HI	GCNGC	3 cut(s)	59, 817, 1374
FspBI	CTAG	4 cut(s)	405, 432, 992, 1047
GlaI	GCGC	2 cut(s)	10, 694
GluI	GCNGC	3 cut(s)	59, 817, 1374
GsaI	CCCAGC	3 cut(s)	308, 699, 828
HaeII	RGCGCY	2 cut(s)	12, 696
HaeIII	GGCC	8 cut(s)	203, 309, 320, 344, 546, 978, 1251, 1566
HapII	CCGG	6 cut(s)	345, 361, 547, 689, 785, 1155
HgaI	GACGC	3 cut(s)	239, 322, 367
HhaI	GCGC	2 cut(s)	11, 695
Hin1I	GRCGYC	3 cut(s)	231, 333, 378
Hin6I	GCGC	2 cut(s)	9, 693
HinP1I	GCGC	2 cut(s)	9, 693
HincII	GTYRAC	4 cut(s)	136, 1467, 1521, 1668
HindII	GTYRAC	4 cut(s)	136, 1467, 1521, 1668
HindIII	AAGCTT	2 cut(s)	747, 1183
HinfI	GANTC	2 cut(s)	222, 1387
HpaI	GTTAAC	1 cut(s)	1668
HpaII	CCGG	6 cut(s)	345, 361, 547, 689, 785, 1155
HphI	GGTGA	1 cut(s)	1621
Hpy188I	TCNGA	6 cut(s)	98, 229, 316, 1005, 1220, 1437
Hpy188III	TCNNGA	6 cut(s)	992, 1240, 1539, 1577, 1676, 1753
Hpy99I	CGWCG	5 cut(s)	131, 137, 140, 233, 377
HpyAV	CCTTC	8 cut(s)	319, 323, 1199, 1310, 1346, 1432, 1498, 1583
HpyCH4III	ACNGT	6 cut(s)	373, 463, 913, 1150, 1633, 1730
HpyCH4IV	ACGT	1 cut(s)	611
HpyF10VI	GCNNNNNNNGC	7 cut(s)	58, 113, 122, 288, 746, 1175, 1370
HpyF3I	CTNAG	4 cut(s)	54, 198, 474, 1170
HpySE526I	ACGT	1 cut(s)	611
Hsp92I	GRCGYC	3 cut(s)	231, 333, 378
HspAI	GCGC	2 cut(s)	9, 693
KroI	GCCGGC	1 cut(s)	546
KroNI	GCCGGC	1 cut(s)	548
KspAI	GTTAAC	1 cut(s)	1668
KspI	CCGCGG	1 cut(s)	62
Kzo9I	GATC	7 cut(s)	175, 252, 641, 793, 929, 1036, 1672
LguI	GCTCTTC	1 cut(s)	781
LmnI	GCTCC	2 cut(s)	66, 167
Lsp1109I	GCAGC	1 cut(s)	1385
LweI	GCATC	2 cut(s)	376, 1769
MaeI	CTAG	4 cut(s)	405, 432, 992, 1047
MaeII	ACGT	1 cut(s)	611
MaeIII	GTNAC	6 cut(s)	509, 677, 907, 945, 1150, 1783
MalI	GATC	7 cut(s)	177, 254, 643, 795, 931, 1038, 1674
MboI	GATC	7 cut(s)	175, 252, 641, 793, 929, 1036, 1672
MboII	GAAGA	5 cut(s)	154, 768, 803, 1662, 1704
MflI	RGATCY	5 cut(s)	175, 641, 793, 929, 1036
MhlI	GDGCHC	2 cut(s)	475, 660
MlsI	TGGCCA	1 cut(s)	1566
MluCI	AATT	8 cut(s)	565, 588, 618, 842, 954, 1396, 1608, 1734
MluNI	TGGCCA	1 cut(s)	1566
MlyI	GAGTC	1 cut(s)	216
MmeI	TCCRAC	2 cut(s)	252, 786
Mox20I	TGGCCA	1 cut(s)	1566
MroNI	GCCGGC	1 cut(s)	546
MscI	TGGCCA	1 cut(s)	1566
MseI	TTAA	8 cut(s)	800, 848, 860, 953, 986, 1041, 1607, 1667
Msp20I	TGGCCA	1 cut(s)	1566
MspA1I	CMGCKG	1 cut(s)	61
MspCI	CTTAAG	1 cut(s)	1040
MspI	CCGG	6 cut(s)	345, 361, 547, 689, 785, 1155
MspR9I	CCNGG	8 cut(s)	188, 504, 525, 690, 967, 980, 1156, 1449
Mva1269I	GAATGC	1 cut(s)	1180
MvaI	CCWGG	6 cut(s)	188, 504, 525, 967, 980, 1449
MvnI	CGCG	2 cut(s)	61, 868
MwoI	GCNNNNNNNGC	7 cut(s)	58, 113, 122, 288, 746, 1175, 1370
NaeI	GCCGGC	1 cut(s)	548
NciI	CCSGG	2 cut(s)	690, 1156
NdeI	CATATG	1 cut(s)	1571
NdeII	GATC	7 cut(s)	175, 252, 641, 793, 929, 1036, 1672
NgoMIV	GCCGGC	1 cut(s)	546
NlaIV	GGNNCC	4 cut(s)	177, 643, 1023, 1434
NmuCI	GTSAC	2 cut(s)	509, 1783
NspI	RCATGY	3 cut(s)	298, 415, 1456
PaeI	GCATGC	1 cut(s)	1456
PaqCI	CACCTGC	1 cut(s)	309
PasI	CCCWGGG	1 cut(s)	187
PciSI	GCTCTTC	1 cut(s)	781
PcsI	WCGNNNNNNNCGW	1 cut(s)	135
PctI	GAATGC	1 cut(s)	1180
PdiI	GCCGGC	1 cut(s)	548
PfeI	GAWTC	1 cut(s)	1387
PkrI	GCNGC	3 cut(s)	60, 818, 1375
PleI	GAGTC	1 cut(s)	216
PpsI	GAGTC	1 cut(s)	216
Ppu21I	YACGTR	1 cut(s)	612
PshBI	ATTAAT	1 cut(s)	1607
Psp6I	CCWGG	6 cut(s)	186, 502, 523, 965, 978, 1447
PspFI	CCCAGC	3 cut(s)	304, 695, 824
PspGI	CCWGG	6 cut(s)	186, 502, 523, 965, 978, 1447
PspN4I	GGNNCC	4 cut(s)	177, 643, 1023, 1434
PspPI	GGNCC	8 cut(s)	72, 307, 544, 976, 1334, 1433, 1445, 1595
PsuI	RGATCY	5 cut(s)	175, 641, 793, 929, 1036
RsaI	GTAC	7 cut(s)	158, 275, 482, 529, 1074, 1742, 1761
RsaNI	GTAC	7 cut(s)	157, 274, 481, 528, 1073, 1741, 1760
SacII	CCGCGG	1 cut(s)	62
SalI	GTCGAC	1 cut(s)	134
SapI	GCTCTTC	1 cut(s)	781
SaqAI	TTAA	8 cut(s)	800, 848, 860, 953, 986, 1041, 1607, 1667
SatI	GCNGC	3 cut(s)	59, 817, 1374
Sau3AI	GATC	7 cut(s)	175, 252, 641, 793, 929, 1036, 1672
Sau96I	GGNCC	8 cut(s)	72, 307, 544, 976, 1334, 1433, 1445, 1595
SchI	GAGTC	1 cut(s)	216
ScrFI	CCNGG	8 cut(s)	188, 504, 525, 690, 967, 980, 1156, 1449
SduI	GDGCHC	2 cut(s)	475, 660
SfaNI	GCATC	2 cut(s)	376, 1769
SfcI	CTRYAG	2 cut(s)	418, 1293
Sfr303I	CCGCGG	1 cut(s)	62
SgrBI	CCGCGG	1 cut(s)	62
SgrDI	CGTCGACG	1 cut(s)	134
SinI	GGWCC	5 cut(s)	72, 1334, 1433, 1445, 1595
SmlI	CTYRAG	1 cut(s)	1040
SmoI	CTYRAG	1 cut(s)	1040
SphI	GCATGC	1 cut(s)	1456
Sse9I	AATT	8 cut(s)	565, 588, 618, 842, 954, 1396, 1608, 1734
SsiI	CCGC	8 cut(s)	43, 50, 59, 61, 105, 114, 817, 866
SspMI	CTAG	4 cut(s)	405, 432, 992, 1047
StyD4I	CCNGG	8 cut(s)	186, 502, 523, 688, 965, 978, 1154, 1447
StyI	CCWWGG	1 cut(s)	1224
TaaI	ACNGT	6 cut(s)	373, 463, 913, 1150, 1633, 1730
TaiI	ACGT	1 cut(s)	614
TaqI	TCGA	3 cut(s)	135, 1641, 1690
TaqII	GACCGA	1 cut(s)	1538
TasI	AATT	8 cut(s)	565, 588, 618, 842, 954, 1396, 1608, 1734
TatI	WGTACW	4 cut(s)	156, 1072, 1740, 1759
TauI	GCSGC	2 cut(s)	61, 819
TfiI	GAWTC	1 cut(s)	1387
Tru1I	TTAA	8 cut(s)	800, 848, 860, 953, 986, 1041, 1607, 1667
Tru9I	TTAA	8 cut(s)	800, 848, 860, 953, 986, 1041, 1607, 1667
TscAI	CASTG	4 cut(s)	388, 482, 1170, 1483
TseFI	GTSAC	2 cut(s)	509, 1783
TseI	GCWGC	1 cut(s)	1373
Tsp45I	GTSAC	2 cut(s)	509, 1783
TspDTI	ATGAA	1 cut(s)	1409
TspGWI	ACGGA	3 cut(s)	188, 228, 256
TspRI	CASTG	4 cut(s)	388, 482, 1170, 1483
Vha464I	CTTAAG	1 cut(s)	1040
VpaK11BI	GGWCC	5 cut(s)	72, 1334, 1433, 1445, 1595
VspI	ATTAAT	1 cut(s)	1607
XagI	CCTNNNNNAGG	1 cut(s)	314
XapI	RAATTY	2 cut(s)	1396, 1734
XbaI	TCTAGA	1 cut(s)	991
XceI	RCATGY	3 cut(s)	298, 415, 1456
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1265, 1483
XmiI	GTMKAC	3 cut(s)	135, 716, 1199
XspI	CTAG	4 cut(s)	405, 432, 992, 1047

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.