Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0014336

Physical Location & Seq

Genomic Coordinates Forward (+)

15316038 .. 15320445

Gene Structure 4408 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G007280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGCAAGGCGCTCTCATTAGCTCTACTTCCACCATCCAACTCCGGCCACCGCCTCAGCCGCGGCGGAGCAGGACCACTCCTCATGTATTCTCCATCCGAGCCTCCGCCCAATCCGCCCCCATTGCCGTCGCCGTTGACGAGAAAAAGCTCAACATGTACAGCTCCCAAATCACGGATCCCAAGTCCCAGGGAGGCTCTCAGGCCATTCTCTACGGAGTGGGACTCTCCGACGCCGACATGAGCAAGCCCCAGATCGGCATATCCTCCGTCTGGTACGAGGGCAACACTTGCAACATGCACCTGCTGGGCCTCTCGGAGGCCGTGAAGCAAGGGGTGCAAGAGGCCGGAATGGTCGGCTTCCGGTTCAACACCGTCGGCGTCAGTGATGCTATCTCTATGGGGACTAGGGGCATGTGCTACAGCTTGCAGTCTAGGGATTTGATTGCTGATAGCATTGAGACTGTCATGGGGGCTCAGTGGTACGATGGCAATATTTCCATTCCTGGCTGTGACAAAAATATGCCCGGTACTATTATGGCAATGGGCCGGCTCAACCGACCAAGTATCATGGTTTATGGGGGAACTATCAAGCCTGGGCATTTCCAAGGCAATACTTATGACATAGTATCCGCCTTTCAGATTTATGGAGAGTATGTAAGTGGATCCATAAGTGATGAGCACAGAAAGAATGTTGTTCGTAACTCCTGTCCGGGCGCTGGGGCTTGTGGTGGAATGTATACAGCTAATACAATGGCTTGTGCCATTGAAGCTTTAGGAATGTCTATACCTTACAGCTCTTCTACACCGGCTGAAGATCCATTAAAGTTGGATGAGTGCCGCTTGGCTGGGAAATATCTGCTGGAATTATTAAAAATGGATTTAAAACCGCGAGATATTATTACTCCAAAGTCGCTACATAATGCTATGGTTACTGTCATGGCATTGGGTGGATCTACCAATGCTGTGTTACACTTAATTGCTATTGCCAGGTCTGTGGGCCTGGACTTAACTCTAGATGATTTTCAGAGAGTTAGCGATAAGGTTCCATTTCTTGCAGATCTTAAGCCTAGTGGCAAGTATGTCATGGAGGATGTACACAAGATTGGAGGAACACCAGCCGTGCTTCGCTACCTATTGGAGAATGGACTTTTACATGGGGATTGTATAACTGTAACCGGGAGGACACTGGCTGAGAATGCCAAAAGCTTCCTTCCTTTGTCTACTGGGCAGGATATAATCAGACCCTTGGAAAATCCTATCAAGAAAACTGGCCACCTCCAAGTATTATATGGAAATCTTGCACCAAAGGGTTCTGTAGCAAAGATTACAGGGAAAGAAGGGCTATACTTCTCTGGTCCAGCACTTGTCTTTGAAGGGGAGGAGGCTATGATTGCAGCTATCACAGAGAATCCAATGAATTTCAAGGGAAAAGTAGTTGTTATTAGAGGAGAGGGTCCGAAGGGAGGACCAGGCATGCCGGAAATGTTGACACCTACCAGTGCAATAATGGGTGCAGGTCTTGGGAAGGAAACAGCATTGTTGACCGATGGTAGGTTTTCAGGAGGTTCACATGGATTTGTTGTTGGCCACATATGTCCTGAAGCACAGGAAGGTGGTCCTATTGGATTAATTGAAAACGGGGACATCATCACCGTTGATGTCGAAAAGAGAAGATTGGATGTTCAGTTAACAGATCAAGAGATGGACACTCGAAGAAAGAACTGGGTTGCACCTCCATACAAGGCTAACCGTGGAATTTTGTACAAGTATATCAAGAATGTACAATCAGCTTCAAATGGATGCGTGACGGATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004160 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009507 GO:0009532 GO:0009536 GO:0009553 GO:0009555 GO:0009570 GO:0009628 GO:0009651 GO:0009987 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0019752 GO:0022622 GO:0032501 GO:0032502 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046872 GO:0046914 GO:0048229 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0071704 GO:0099402 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00290 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

ILVD_EDD

Protein Analysis

605

Amino Acids

64.71

Weight (kDa)

6.84

Isoelectric Point (pI)

34.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ILVD_EDD_N	PF00920	82 - 399	9.8e-133	Dihydroxy-acid/6-phosphogluconate dehydratase N-terminal
ILV_EDD_C	PF24877	411 - 601	5.8e-74	Dihydroxy-acid/6-phosphogluconate dehydratase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014336)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23940 AT3G23940
fragaria_vesca	FvH4_7g04190
malus_domestica	MD04G1003600.v1.1
prunus_persica	Prupe.1G003100_v2.0.a1 Prupe.1G003100_v2.0.a1
pyrus_communis	pycom04g00370 pycom420g00750
rosa_chinensis	RchiOBHm_Chr1g0328531
rosa_laevigata	RLG00000029925
rosa_multiflora	Rmu_sc0001563.1_g000010
rosa_roxburghii	Rroxscaffold_4G00321530
rosa_rugosa	Rorug01G0074800
rosa_samantha	Rh1AG093500 Rh1CG090600 Rh1DG096600
rosa_wichuraiana	Rw1G007280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	309
Acc36I	ACCTGC	2 cut(s)	309, 1505
AccI	GTMKAC	2 cut(s)	737, 1220
AccII	CGCG	2 cut(s)	61, 889
AciI	CCGC	9 cut(s)	50, 59, 61, 64, 105, 114, 630, 838, 887
AclWI	GGATC	6 cut(s)	170, 183, 657, 670, 809, 958
AcoI	YGGCCR	3 cut(s)	44, 1270, 1585
AcsI	RAATTY	2 cut(s)	1417, 1755
AcuI	CTGAAG	2 cut(s)	831, 1620
AcyI	GRCGYC	2 cut(s)	231, 378
AfaI	GTAC	7 cut(s)	158, 275, 482, 529, 1095, 1763, 1782
AfiI	CCNNNNNNNGG	7 cut(s)	172, 254, 270, 316, 716, 1463, 1551
AflII	CTTAAG	1 cut(s)	1061
AflIII	ACRYGT	1 cut(s)	153
AgsI	TTSAA	6 cut(s)	367, 767, 1373, 1423, 1634, 1794
AjnI	CCWGG	6 cut(s)	186, 502, 592, 986, 999, 1468
Alw21I	GWGCWC	1 cut(s)	681
Alw26I	GTCTC	1 cut(s)	452
AlwI	GGATC	6 cut(s)	170, 183, 657, 670, 809, 958
AoxI	GGCC	9 cut(s)	44, 201, 307, 318, 342, 544, 997, 1270, 1585
ApeKI	GCWGC	1 cut(s)	1394
ApoI	RAATTY	2 cut(s)	1417, 1755
AseI	ATTAAT	1 cut(s)	1628
AspLEI	GCGC	2 cut(s)	11, 716
AspS9I	GGNCC	8 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616
AsuC2I	CCSGG	3 cut(s)	525, 711, 1177
AsuHPI	GGTGA	1 cut(s)	1642
AvaII	GGWCC	5 cut(s)	72, 1355, 1454, 1466, 1616
BalI	TGGCCA	2 cut(s)	1272, 1587
BamHI	GGATCC	2 cut(s)	175, 662
BanII	GRGCYC	1 cut(s)	475
Bbv12I	GWGCWC	1 cut(s)	681
BbvCI	CCTCAGC	1 cut(s)	54
BbvI	GCAGC	1 cut(s)	1406
BccI	CCATC	5 cut(s)	41, 101, 479, 1541, 1696
BceAI	ACGGC	4 cut(s)	110, 116, 305, 1103
BciT130I	CCWGG	6 cut(s)	188, 504, 594, 988, 1001, 1470
BciVI	GTATCC	1 cut(s)	637
BcnI	CCSGG	3 cut(s)	525, 711, 1177
BcoDI	GTCTC	1 cut(s)	452
BfaI	CTAG	4 cut(s)	405, 432, 1013, 1068
BfmI	CTRYAG	2 cut(s)	418, 1314
BfoI	RGCGCY	2 cut(s)	12, 717
BfrI	CTTAAG	1 cut(s)	1061
BfuAI	ACCTGC	2 cut(s)	309, 1505
BfuI	GTATCC	1 cut(s)	637
BglII	AGATCT	1 cut(s)	1057
BisI	GCNGC	4 cut(s)	59, 62, 838, 1395
BlsI	GCNGC	4 cut(s)	60, 63, 839, 1396
Bme1390I	CCNGG	9 cut(s)	188, 504, 525, 594, 711, 988, 1001, 1177, 1470
Bme18I	GGWCC	5 cut(s)	72, 1355, 1454, 1466, 1616
BmgT120I	GGNCC	8 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616
BmiI	GGNNCC	4 cut(s)	177, 664, 1044, 1455
BmrFI	CCNGG	9 cut(s)	188, 504, 525, 594, 711, 988, 1001, 1177, 1470
BmrI	ACTGGG	2 cut(s)	1233, 1732
BmsI	GCATC	2 cut(s)	376, 1790
BmuI	ACTGGG	2 cut(s)	1233, 1732
BplI	GAGNNNNNCTC	2 cut(s)	207, 239
Bpu10I	CCTNAGC	1 cut(s)	54
BpuMI	CCSGG	3 cut(s)	525, 711, 1177
BsaHI	GRCGYC	2 cut(s)	231, 378
BsaJI	CCNNGG	7 cut(s)	59, 186, 187, 593, 604, 1245, 1750
BsaWI	WCCGGW	1 cut(s)	360
BsaXI	ACNNNNNCTCC	2 cut(s)	639, 669
Bsc4I	CCNNNNNNNGG	7 cut(s)	172, 254, 270, 316, 716, 1463, 1551
Bse118I	RCCGGY	2 cut(s)	546, 805
Bse1I	ACTGG	5 cut(s)	1191, 1228, 1273, 1497, 1727
Bse3DI	GCAATG	2 cut(s)	120, 546
BseBI	CCWGG	6 cut(s)	188, 504, 594, 988, 1001, 1470
BseDI	CCNNGG	7 cut(s)	59, 186, 187, 593, 604, 1245, 1750
BseGI	GGATG	7 cut(s)	33, 93, 835, 1096, 1684, 1805, 1816
BseLI	CCNNNNNNNGG	7 cut(s)	172, 254, 270, 316, 716, 1463, 1551
BseMI	GCAATG	2 cut(s)	120, 546
BseMII	CTCAG	4 cut(s)	68, 212, 488, 1182
BseNI	ACTGG	5 cut(s)	1191, 1228, 1273, 1497, 1727
BseRI	GAGGAG	3 cut(s)	69, 1394, 1461
BseXI	GCAGC	1 cut(s)	1406
BseYI	CCCAGC	3 cut(s)	304, 716, 845
BsgI	GTGCAG	1 cut(s)	1533
Bsh1236I	CGCG	2 cut(s)	61, 889
BshFI	GGCC	9 cut(s)	46, 203, 309, 320, 344, 546, 999, 1272, 1587
BsiHKAI	GWGCWC	1 cut(s)	681
BsiSI	CCGG	9 cut(s)	43, 345, 361, 525, 547, 710, 806, 1176, 1478
BslFI	GGGAC	4 cut(s)	169, 234, 415, 1655
BslI	CCNNNNNNNGG	7 cut(s)	172, 254, 270, 316, 716, 1463, 1551
BsmAI	GTCTC	1 cut(s)	452
BsmFI	GGGAC	4 cut(s)	169, 234, 415, 1655
BsmI	GAATGC	1 cut(s)	1201
BsnI	GGCC	9 cut(s)	46, 203, 309, 320, 344, 546, 999, 1272, 1587
Bsp1286I	GDGCHC	2 cut(s)	475, 681
Bsp1407I	TGTACA	4 cut(s)	156, 1093, 1761, 1780
Bsp143I	GATC	7 cut(s)	175, 252, 662, 814, 950, 1057, 1693
BspACI	CCGC	9 cut(s)	50, 59, 61, 64, 105, 114, 630, 838, 887
BspANI	GGCC	9 cut(s)	46, 203, 309, 320, 344, 546, 999, 1272, 1587
BspCNI	CTCAG	4 cut(s)	67, 211, 487, 1183
BspFNI	CGCG	2 cut(s)	61, 889
BspLI	GGNNCC	4 cut(s)	177, 664, 1044, 1455
BspMI	ACCTGC	2 cut(s)	309, 1505
BspPI	GGATC	6 cut(s)	170, 183, 657, 670, 809, 958
BspQI	GCTCTTC	1 cut(s)	802
BspTI	CTTAAG	1 cut(s)	1061
BsrDI	GCAATG	2 cut(s)	120, 546
BsrFI	RCCGGY	2 cut(s)	546, 805
BsrGI	TGTACA	4 cut(s)	156, 1093, 1761, 1780
BsrI	ACTGG	5 cut(s)	1191, 1228, 1273, 1497, 1727
BssAI	RCCGGY	2 cut(s)	546, 805
BssECI	CCNNGG	7 cut(s)	59, 186, 187, 593, 604, 1245, 1750
BssMI	GATC	7 cut(s)	175, 252, 662, 814, 950, 1057, 1693
BssNAI	GTATAC	1 cut(s)	738
BssNI	GRCGYC	2 cut(s)	231, 378
BssT1I	CCWWGG	2 cut(s)	604, 1245
Bst1107I	GTATAC	1 cut(s)	738
Bst2UI	CCWGG	6 cut(s)	188, 504, 594, 988, 1001, 1470
Bst4CI	ACNGT	6 cut(s)	373, 463, 934, 1171, 1654, 1751
Bst6I	CTCTTC	1 cut(s)	802
BstACI	GRCGYC	2 cut(s)	231, 378
BstAFI	CTTAAG	1 cut(s)	1061
BstAPI	GCANNNNNTGC	2 cut(s)	288, 334
BstAUI	TGTACA	4 cut(s)	156, 1093, 1761, 1780
BstC8I	GCNNGC	4 cut(s)	245, 425, 548, 1475
BstDEI	CTNAG	4 cut(s)	54, 198, 474, 1191
BstDSI	CCRYGG	2 cut(s)	59, 1750
BstENI	CCTNNNNNAGG	1 cut(s)	314
BstF5I	GGATG	7 cut(s)	33, 93, 835, 1096, 1684, 1805, 1816
BstFNI	CGCG	2 cut(s)	61, 889
BstH2I	RGCGCY	2 cut(s)	12, 717
BstHHI	GCGC	2 cut(s)	11, 716
BstKTI	GATC	7 cut(s)	178, 255, 665, 817, 953, 1060, 1696
BstMAI	GTCTC	1 cut(s)	452
BstMBI	GATC	7 cut(s)	175, 252, 662, 814, 950, 1057, 1693
BstMWI	GCNNNNNNNGC	8 cut(s)	58, 113, 122, 288, 334, 767, 1196, 1391
BstNI	CCWGG	6 cut(s)	188, 504, 594, 988, 1001, 1470
BstNSI	RCATGY	4 cut(s)	157, 298, 415, 1477
BstSCI	CCNGG	9 cut(s)	186, 502, 523, 592, 709, 986, 999, 1175, 1468
BstSFI	CTRYAG	2 cut(s)	418, 1314
BstUI	CGCG	2 cut(s)	61, 889
BstV1I	GCAGC	1 cut(s)	1406
BstX2I	RGATCY	5 cut(s)	175, 662, 814, 950, 1057
BstXI	CCANNNNNNTGG	1 cut(s)	994
BstYI	RGATCY	5 cut(s)	175, 662, 814, 950, 1057
BstZ17I	GTATAC	1 cut(s)	738
BsuI	GTATCC	1 cut(s)	637
BsuRI	GGCC	9 cut(s)	46, 203, 309, 320, 344, 546, 999, 1272, 1587
BtgI	CCRYGG	2 cut(s)	59, 1750
BtsCI	GGATG	7 cut(s)	33, 93, 835, 1096, 1684, 1805, 1816
BtsIMutI	CAGTG	4 cut(s)	388, 482, 1184, 1504
BveI	ACCTGC	2 cut(s)	309, 1505
Cac8I	GCNNGC	4 cut(s)	245, 425, 548, 1475
CfoI	GCGC	2 cut(s)	11, 716
Cfr10I	RCCGGY	2 cut(s)	546, 805
Cfr13I	GGNCC	8 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616
Cfr42I	CCGCGG	1 cut(s)	62
CseI	GACGC	2 cut(s)	239, 367
Csp6I	GTAC	7 cut(s)	157, 274, 481, 528, 1094, 1762, 1781
CviQI	GTAC	7 cut(s)	157, 274, 481, 528, 1094, 1762, 1781
DdeI	CTNAG	4 cut(s)	54, 198, 474, 1191
DpnI	GATC	7 cut(s)	177, 254, 664, 816, 952, 1059, 1695
DpnII	GATC	7 cut(s)	175, 252, 662, 814, 950, 1057, 1693
DraI	TTTAAA	1 cut(s)	882
EaeI	YGGCCR	3 cut(s)	44, 1270, 1585
Eam1104I	CTCTTC	1 cut(s)	802
EarI	CTCTTC	1 cut(s)	802
EciI	GGCGGA	4 cut(s)	79, 94, 103, 619
Eco130I	CCWWGG	2 cut(s)	604, 1245
Eco24I	GRGCYC	1 cut(s)	475
Eco47I	GGWCC	5 cut(s)	72, 1355, 1454, 1466, 1616
Eco57I	CTGAAG	2 cut(s)	831, 1620
EcoNI	CCTNNNNNAGG	1 cut(s)	314
EcoRII	CCWGG	6 cut(s)	186, 502, 592, 986, 999, 1468
EcoT14I	CCWWGG	2 cut(s)	604, 1245
EcoT38I	GRGCYC	1 cut(s)	475
ErhI	CCWWGG	2 cut(s)	604, 1245
FaqI	GGGAC	4 cut(s)	169, 234, 415, 1655
FauNDI	CATATG	1 cut(s)	1592
FblI	GTMKAC	2 cut(s)	737, 1220
Fnu4HI	GCNGC	4 cut(s)	59, 62, 838, 1395
FokI	GGATG	6 cut(s)	20, 80, 842, 1103, 1691, 1812
FriOI	GRGCYC	1 cut(s)	475
Fsp4HI	GCNGC	4 cut(s)	59, 62, 838, 1395
FspBI	CTAG	4 cut(s)	405, 432, 1013, 1068
GlaI	GCGC	2 cut(s)	10, 715
GluI	GCNGC	4 cut(s)	59, 62, 838, 1395
GsaI	CCCAGC	3 cut(s)	308, 720, 849
HaeII	RGCGCY	2 cut(s)	12, 717
HaeIII	GGCC	9 cut(s)	46, 203, 309, 320, 344, 546, 999, 1272, 1587
HapII	CCGG	9 cut(s)	43, 345, 361, 525, 547, 710, 806, 1176, 1478
HgaI	GACGC	2 cut(s)	239, 367
HhaI	GCGC	2 cut(s)	11, 716
Hin1I	GRCGYC	2 cut(s)	231, 378
Hin6I	GCGC	2 cut(s)	9, 714
HinP1I	GCGC	2 cut(s)	9, 714
HincII	GTYRAC	4 cut(s)	136, 1488, 1542, 1689
HindII	GTYRAC	4 cut(s)	136, 1488, 1542, 1689
HindIII	AAGCTT	2 cut(s)	768, 1204
HinfI	GANTC	2 cut(s)	222, 1408
HpaI	GTTAAC	1 cut(s)	1689
HpaII	CCGG	9 cut(s)	43, 345, 361, 525, 547, 710, 806, 1176, 1478
HphI	GGTGA	1 cut(s)	1642
Hpy166II	GTNNAC	8 cut(s)	136, 738, 1096, 1221, 1488, 1542, 1568, 1689
Hpy188I	TCNGA	7 cut(s)	98, 229, 316, 639, 1026, 1241, 1458
Hpy188III	TCNNGA	6 cut(s)	1013, 1261, 1560, 1598, 1697, 1774
Hpy8I	GTNNAC	8 cut(s)	136, 738, 1096, 1221, 1488, 1542, 1568, 1689
Hpy99I	CGWCG	3 cut(s)	131, 233, 377
HpyAV	CCTTC	6 cut(s)	1220, 1331, 1367, 1453, 1519, 1604
HpyCH4III	ACNGT	6 cut(s)	373, 463, 934, 1171, 1654, 1751
HpyF10VI	GCNNNNNNNGC	8 cut(s)	58, 113, 122, 288, 334, 767, 1196, 1391
HpyF3I	CTNAG	4 cut(s)	54, 198, 474, 1191
Hsp92I	GRCGYC	2 cut(s)	231, 378
HspAI	GCGC	2 cut(s)	9, 714
KroI	GCCGGC	1 cut(s)	546
KroNI	GCCGGC	1 cut(s)	548
KspAI	GTTAAC	1 cut(s)	1689
KspI	CCGCGG	1 cut(s)	62
Kzo9I	GATC	7 cut(s)	175, 252, 662, 814, 950, 1057, 1693
LguI	GCTCTTC	1 cut(s)	802
LmnI	GCTCC	2 cut(s)	66, 167
Lsp1109I	GCAGC	1 cut(s)	1406
LweI	GCATC	2 cut(s)	376, 1790
MaeI	CTAG	4 cut(s)	405, 432, 1013, 1068
MaeIII	GTNAC	6 cut(s)	509, 698, 928, 966, 1171, 1804
MalI	GATC	7 cut(s)	177, 254, 664, 816, 952, 1059, 1695
MboI	GATC	7 cut(s)	175, 252, 662, 814, 950, 1057, 1693
MboII	GAAGA	4 cut(s)	789, 824, 1683, 1725
MflI	RGATCY	5 cut(s)	175, 662, 814, 950, 1057
MhlI	GDGCHC	2 cut(s)	475, 681
MlsI	TGGCCA	2 cut(s)	1272, 1587
MluCI	AATT	5 cut(s)	863, 975, 1417, 1629, 1755
MluNI	TGGCCA	2 cut(s)	1272, 1587
MlyI	GAGTC	1 cut(s)	216
MmeI	TCCRAC	3 cut(s)	61, 252, 807
Mox20I	TGGCCA	2 cut(s)	1272, 1587
MroNI	GCCGGC	1 cut(s)	546
MscI	TGGCCA	2 cut(s)	1272, 1587
MseI	TTAA	8 cut(s)	821, 869, 881, 974, 1007, 1062, 1628, 1688
Msp20I	TGGCCA	2 cut(s)	1272, 1587
MspA1I	CMGCKG	1 cut(s)	61
MspCI	CTTAAG	1 cut(s)	1061
MspI	CCGG	9 cut(s)	43, 345, 361, 525, 547, 710, 806, 1176, 1478
MspR9I	CCNGG	9 cut(s)	188, 504, 525, 594, 711, 988, 1001, 1177, 1470
Mva1269I	GAATGC	1 cut(s)	1201
MvaI	CCWGG	6 cut(s)	188, 504, 594, 988, 1001, 1470
MvnI	CGCG	2 cut(s)	61, 889
MwoI	GCNNNNNNNGC	8 cut(s)	58, 113, 122, 288, 334, 767, 1196, 1391
NaeI	GCCGGC	1 cut(s)	548
NciI	CCSGG	3 cut(s)	525, 711, 1177
NdeI	CATATG	1 cut(s)	1592
NdeII	GATC	7 cut(s)	175, 252, 662, 814, 950, 1057, 1693
NgoMIV	GCCGGC	1 cut(s)	546
NlaIV	GGNNCC	4 cut(s)	177, 664, 1044, 1455
NmuCI	GTSAC	2 cut(s)	509, 1804
NspI	RCATGY	4 cut(s)	157, 298, 415, 1477
PaeI	GCATGC	1 cut(s)	1477
PaqCI	CACCTGC	1 cut(s)	309
PasI	CCCWGGG	1 cut(s)	187
PciI	ACATGT	1 cut(s)	153
PciSI	GCTCTTC	1 cut(s)	802
PcsI	WCGNNNNNNNCGW	1 cut(s)	135
PctI	GAATGC	1 cut(s)	1201
PdiI	GCCGGC	1 cut(s)	548
PfeI	GAWTC	1 cut(s)	1408
PkrI	GCNGC	4 cut(s)	60, 63, 839, 1396
PleI	GAGTC	1 cut(s)	216
PpsI	GAGTC	1 cut(s)	216
PscI	ACATGT	1 cut(s)	153
PshBI	ATTAAT	1 cut(s)	1628
Psp6I	CCWGG	6 cut(s)	186, 502, 592, 986, 999, 1468
PspFI	CCCAGC	3 cut(s)	304, 716, 845
PspGI	CCWGG	6 cut(s)	186, 502, 592, 986, 999, 1468
PspN4I	GGNNCC	4 cut(s)	177, 664, 1044, 1455
PspPI	GGNCC	8 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616
PsuI	RGATCY	5 cut(s)	175, 662, 814, 950, 1057
RsaI	GTAC	7 cut(s)	158, 275, 482, 529, 1095, 1763, 1782
RsaNI	GTAC	7 cut(s)	157, 274, 481, 528, 1094, 1762, 1781
SacII	CCGCGG	1 cut(s)	62
SapI	GCTCTTC	1 cut(s)	802
SaqAI	TTAA	8 cut(s)	821, 869, 881, 974, 1007, 1062, 1628, 1688
SatI	GCNGC	4 cut(s)	59, 62, 838, 1395
Sau3AI	GATC	7 cut(s)	175, 252, 662, 814, 950, 1057, 1693
Sau96I	GGNCC	8 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616
SchI	GAGTC	1 cut(s)	216
ScrFI	CCNGG	9 cut(s)	188, 504, 525, 594, 711, 988, 1001, 1177, 1470
SduI	GDGCHC	2 cut(s)	475, 681
SfaNI	GCATC	2 cut(s)	376, 1790
SfcI	CTRYAG	2 cut(s)	418, 1314
Sfr303I	CCGCGG	1 cut(s)	62
SgrBI	CCGCGG	1 cut(s)	62
SinI	GGWCC	5 cut(s)	72, 1355, 1454, 1466, 1616
SmlI	CTYRAG	1 cut(s)	1061
SmoI	CTYRAG	1 cut(s)	1061
SphI	GCATGC	1 cut(s)	1477
Sse9I	AATT	5 cut(s)	863, 975, 1417, 1629, 1755
SsiI	CCGC	9 cut(s)	50, 59, 61, 64, 105, 114, 630, 838, 887
SspI	AATATT	1 cut(s)	493
SspMI	CTAG	4 cut(s)	405, 432, 1013, 1068
StyD4I	CCNGG	9 cut(s)	186, 502, 523, 592, 709, 986, 999, 1175, 1468
StyI	CCWWGG	2 cut(s)	604, 1245
TaaI	ACNGT	6 cut(s)	373, 463, 934, 1171, 1654, 1751
TaqI	TCGA	2 cut(s)	1662, 1711
TaqII	GACCGA	1 cut(s)	1559
TasI	AATT	5 cut(s)	863, 975, 1417, 1629, 1755
TatI	WGTACW	4 cut(s)	156, 1093, 1761, 1780
TauI	GCSGC	3 cut(s)	61, 64, 840
TfiI	GAWTC	1 cut(s)	1408
Tru1I	TTAA	8 cut(s)	821, 869, 881, 974, 1007, 1062, 1628, 1688
Tru9I	TTAA	8 cut(s)	821, 869, 881, 974, 1007, 1062, 1628, 1688
TscAI	CASTG	4 cut(s)	388, 482, 1191, 1504
TseFI	GTSAC	2 cut(s)	509, 1804
TseI	GCWGC	1 cut(s)	1394
Tsp45I	GTSAC	2 cut(s)	509, 1804
TspDTI	ATGAA	1 cut(s)	1430
TspGWI	ACGGA	3 cut(s)	188, 228, 256
TspRI	CASTG	4 cut(s)	388, 482, 1191, 1504
Vha464I	CTTAAG	1 cut(s)	1061
VpaK11BI	GGWCC	5 cut(s)	72, 1355, 1454, 1466, 1616
VspI	ATTAAT	1 cut(s)	1628
XagI	CCTNNNNNAGG	1 cut(s)	314
XapI	RAATTY	2 cut(s)	1417, 1755
XbaI	TCTAGA	1 cut(s)	1012
XceI	RCATGY	4 cut(s)	157, 298, 415, 1477
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1286, 1504
XmiI	GTMKAC	2 cut(s)	737, 1220
XspI	CTAG	4 cut(s)	405, 432, 1013, 1068

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.