Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001563.1

Orthogroup ID

OG0014336

Physical Location & Seq

Genomic Coordinates Forward (+)

43464 .. 49172

Gene Structure 5709 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001563.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

atgcaaggcgctctcattagctctacttccaccatcctactccggccaccgcctcagccgcggcggagcaggaccactcctcatgtattctccatccgagcctccgcccaaaccgcccccaatgccgtcgccatcgacgagaagaagctcaacaagtacagctcccaaatcacggatcccaagtcccagggaggctctcaggccattctctacggagtgggactctccgacgccgacatgagcaagccccagatcggcatatcctccgtctggtacgagggcaacacttgcaacatgcacctgctgggcctctcggaggccgtgaagcaaggggtgcaagaggccggaatggtcggcttccggttcaacaccgtcggcgtcagtgatgctatctctatggggactaggggaatgtgctacagcttgcagtctagggatttgattgctgatagcattgagactgtcatgggggctcagtggtacgatggcaatatttccattcctggctgtgacaaaaatatgcccggtactattatggcaatgggccggctcaaccgaccaagtatcatggtttatgggggaactatcaagcctgggcatttccaaggcaatacttatgacatagtatccgcctttcagatttatggagagtatgtaagtggatccataagtgatgagcacagaaagaatgttgttcgtaactcctgtccgggcgctggggcttgtggtggaatgtatacggctaatacaatggcttgtgccattgaagctttaggaatgtctataccttacagctcttctacaccggctgaagatccattaaagttggatgagtgccgcttggctgggaaatatctgctggaattattaaaaatggatttaaaaccgcgagatattattactccaaagtcgctacataatgctatggttactgtcatggcattgggtggatctaccaatgctgtgttacacttaattgctattgccaggtctgtgggcctggacttaactctagatgattttcagagagttagcgatacggttccatttcttgcagatcttaagcctagtggcaagtatgtcatggaggatgtacacaagattggaggaacaccagccgtgcttcgctacctattggagaatggacttttacatggggattgtataactgtaaccgggaggacactggctgagaatgccaaaagcttccttcctttgtctactgggcaggatataatcagacccttggaaaatcctatcaagaaaacaggccacctccaagtattatatggaaatcttgcaccaaagggttctgtagcaaagattacagggaaagaagggctatacttctctggtccagcacttgtctttgaaggggaggaggctatgattgcagctatcacagagaatccaatgaatttcaagggaaaagtagttgttattagaggagagggtccgaagggaggaccaggcatgcctgaaatgttgacacctaccagtgcaataatgggtgcaggtcttgggaaggaaacagcattgttgaccgatggtaggttttcaggaggttcacatggatttgttgttggccacatatgtcctgaagcacaggaaggtggtcctattggattaattgaaaacggggacatcatcaccgttgatgtcgaaaagagaagattggatgttcagttaacagatcaagagatggacactcgaagaaagaactgggttgcacctccatacaaggctaaccgtggaattttgtacaagtatatcaagaatgtacaatcagcttcaaatggatgcgtgacggatgacccaagcagaatcgcagaagtcttcaagcccaactccagaagcccagaagctcacagtcgactggacccactgacccacagccactgccacgttgtccctgccacgtcagctcgcgccacttcagcagtccggctccacgtcagctccggccactttccggcgacctatttcatgagacttgcaacctcccttcttctaccccgctttcttcatcataggggagacctaattaagccgaactgtgggggttcgtgctcactccaagcttggaacttgttgagatctccaaacttagagatgagtaatctgaacaaattggactttgctccatggggaacaattggctctggatatcacaggtgggttcgtgatgtccgtgagcatctaaaggttgatggaatcctggatacgattctcgagcctaaccaggatgtgctaattgttgagcaagctcaagctttggaagcaaatagagcagccttatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004160 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009507 GO:0009532 GO:0009536 GO:0009553 GO:0009555 GO:0009570 GO:0009628 GO:0009651 GO:0009987 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0019752 GO:0022622 GO:0032501 GO:0032502 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046872 GO:0046914 GO:0048229 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0071704 GO:0099402 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00290 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

ILVD_EDD

Protein Analysis

766

Amino Acids

82.57

Weight (kDa)

7.89

Isoelectric Point (pI)

36.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014336)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23940 AT3G23940
fragaria_vesca	FvH4_7g04190
malus_domestica	MD04G1003600.v1.1
prunus_persica	Prupe.1G003100_v2.0.a1 Prupe.1G003100_v2.0.a1
pyrus_communis	pycom04g00370 pycom420g00750
rosa_chinensis	RchiOBHm_Chr1g0328531
rosa_laevigata	RLG00000029925
rosa_multiflora	Rmu_sc0001563.1_g000010
rosa_roxburghii	Rroxscaffold_4G00321530
rosa_rugosa	Rorug01G0074800
rosa_samantha	Rh1AG093500 Rh1CG090600 Rh1DG096600
rosa_wichuraiana	Rw1G007280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	309
Acc36I	ACCTGC	2 cut(s)	309, 1505
AccI	GTMKAC	3 cut(s)	737, 1220, 1873
AccII	CGCG	3 cut(s)	61, 889, 1929
AclWI	GGATC	6 cut(s)	170, 183, 657, 670, 809, 958
AcoI	YGGCCR	3 cut(s)	44, 1585, 1963
AcsI	RAATTY	2 cut(s)	1417, 1755
AcuI	CTGAAG	3 cut(s)	831, 1620, 1920
AcyI	GRCGYC	2 cut(s)	231, 378
AfaI	GTAC	7 cut(s)	158, 275, 482, 529, 1095, 1763, 1782
AfiI	CCNNNNNNNGG	9 cut(s)	172, 254, 270, 316, 716, 1463, 1551, 1972, 2057
AflII	CTTAAG	1 cut(s)	1061
AgsI	TTSAA	7 cut(s)	367, 767, 1373, 1423, 1634, 1794, 1840
AjiI	CACGTC	2 cut(s)	1920, 1954
AjnI	CCWGG	8 cut(s)	186, 502, 592, 986, 999, 1468, 2217, 2241
Alw21I	GWGCWC	2 cut(s)	681, 2072
Alw26I	GTCTC	3 cut(s)	452, 1984, 2031
AlwI	GGATC	6 cut(s)	170, 183, 657, 670, 809, 958
AlwNI	CAGNNNCTG	1 cut(s)	1899
Ama87I	CYCGRG	1 cut(s)	2231
ApeKI	GCWGC	2 cut(s)	1394, 2291
ApoI	RAATTY	2 cut(s)	1417, 1755
AseI	ATTAAT	1 cut(s)	1628
AspLEI	GCGC	3 cut(s)	11, 716, 1931
AspS9I	GGNCC	9 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616, 1879
AsuC2I	CCSGG	3 cut(s)	525, 711, 1177
AsuHPI	GGTGA	1 cut(s)	1642
AvaI	CYCGRG	1 cut(s)	2231
AvaII	GGWCC	6 cut(s)	72, 1355, 1454, 1466, 1616, 1879
BalI	TGGCCA	1 cut(s)	1587
BamHI	GGATCC	2 cut(s)	175, 662
BanII	GRGCYC	1 cut(s)	475
BbsI	GAAGAC	1 cut(s)	1828
Bbv12I	GWGCWC	2 cut(s)	681, 2072
BbvCI	CCTCAGC	1 cut(s)	54
BbvI	GCAGC	1 cut(s)	1406
BccI	CCATC	7 cut(s)	41, 101, 140, 479, 1541, 1696, 2204
BceAI	ACGGC	4 cut(s)	110, 305, 756, 1103
BciT130I	CCWGG	8 cut(s)	188, 504, 594, 988, 1001, 1470, 2219, 2243
BciVI	GTATCC	2 cut(s)	637, 2215
BcnI	CCSGG	3 cut(s)	525, 711, 1177
BcoDI	GTCTC	3 cut(s)	452, 1984, 2031
BfaI	CTAG	4 cut(s)	405, 432, 1013, 1068
BfmI	CTRYAG	2 cut(s)	418, 1314
BfoI	RGCGCY	2 cut(s)	12, 717
BfrI	CTTAAG	1 cut(s)	1061
BfuAI	ACCTGC	2 cut(s)	309, 1505
BfuI	GTATCC	2 cut(s)	637, 2215
BglII	AGATCT	2 cut(s)	1057, 2096
BisI	GCNGC	5 cut(s)	59, 62, 838, 1395, 2292
BlsI	GCNGC	5 cut(s)	60, 63, 839, 1396, 2293
Bme18I	GGWCC	6 cut(s)	72, 1355, 1454, 1466, 1616, 1879
BmeT110I	CYCGRG	1 cut(s)	2231
BmgBI	CACGTC	2 cut(s)	1920, 1954
BmgT120I	GGNCC	9 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616, 1879
BmiI	GGNNCC	6 cut(s)	177, 664, 1044, 1455, 1881, 1949
BmrI	ACTGGG	2 cut(s)	1233, 1732
BmsI	GCATC	3 cut(s)	376, 1790, 2206
BmuI	ACTGGG	2 cut(s)	1233, 1732
BpiI	GAAGAC	1 cut(s)	1828
BplI	GAGNNNNNCTC	2 cut(s)	207, 239
BpmI	CTGGAG	1 cut(s)	1834
Bpu10I	CCTNAGC	1 cut(s)	54
BpuEI	CTTGAG	1 cut(s)	2253
BpuMI	CCSGG	3 cut(s)	525, 711, 1177
BsaHI	GRCGYC	2 cut(s)	231, 378
BsaI	GGTCTC	1 cut(s)	2031
BsaJI	CCNNGG	8 cut(s)	59, 186, 187, 593, 604, 1245, 1750, 2144
BsaWI	WCCGGW	1 cut(s)	360
BsaXI	ACNNNNNCTCC	4 cut(s)	639, 669, 1943, 1973
Bsc4I	CCNNNNNNNGG	9 cut(s)	172, 254, 270, 316, 716, 1463, 1551, 1972, 2057
Bse118I	RCCGGY	2 cut(s)	546, 805
Bse1I	ACTGG	5 cut(s)	1191, 1228, 1497, 1727, 1881
Bse3DI	GCAATG	1 cut(s)	546
BseBI	CCWGG	8 cut(s)	188, 504, 594, 988, 1001, 1470, 2219, 2243
BseDI	CCNNGG	8 cut(s)	59, 186, 187, 593, 604, 1245, 1750, 2144
BseGI	GGATG	8 cut(s)	33, 93, 835, 1096, 1684, 1805, 1816, 2251
BseLI	CCNNNNNNNGG	9 cut(s)	172, 254, 270, 316, 716, 1463, 1551, 1972, 2057
BseMI	GCAATG	1 cut(s)	546
BseMII	CTCAG	4 cut(s)	68, 212, 488, 1182
BseNI	ACTGG	5 cut(s)	1191, 1228, 1497, 1727, 1881
BseRI	GAGGAG	3 cut(s)	69, 1394, 1461
BseXI	GCAGC	1 cut(s)	1406
BseYI	CCCAGC	3 cut(s)	304, 716, 845
BsgI	GTGCAG	1 cut(s)	1533
Bsh1236I	CGCG	3 cut(s)	61, 889, 1929
BsiHKAI	GWGCWC	2 cut(s)	681, 2072
BsiHKCI	CYCGRG	1 cut(s)	2231
BslFI	GGGAC	5 cut(s)	169, 234, 415, 1655, 1895
BslI	CCNNNNNNNGG	9 cut(s)	172, 254, 270, 316, 716, 1463, 1551, 1972, 2057
BsmAI	GTCTC	3 cut(s)	452, 1984, 2031
BsmFI	GGGAC	5 cut(s)	169, 234, 415, 1655, 1895
BsmI	GAATGC	1 cut(s)	1201
Bso31I	GGTCTC	1 cut(s)	2031
BsoBI	CYCGRG	1 cut(s)	2231
Bsp1286I	GDGCHC	3 cut(s)	475, 681, 2072
Bsp1407I	TGTACA	3 cut(s)	1093, 1761, 1780
Bsp143I	GATC	8 cut(s)	175, 252, 662, 814, 950, 1057, 1693, 2096
Bsp19I	CCATGG	1 cut(s)	2144
BspCNI	CTCAG	4 cut(s)	67, 211, 487, 1183
BspFNI	CGCG	3 cut(s)	61, 889, 1929
BspHI	TCATGA	1 cut(s)	1986
BspLI	GGNNCC	6 cut(s)	177, 664, 1044, 1455, 1881, 1949
BspMI	ACCTGC	2 cut(s)	309, 1505
BspPI	GGATC	6 cut(s)	170, 183, 657, 670, 809, 958
BspQI	GCTCTTC	1 cut(s)	802
BspTI	CTTAAG	1 cut(s)	1061
BspTNI	GGTCTC	1 cut(s)	2031
BsrDI	GCAATG	1 cut(s)	546
BsrFI	RCCGGY	2 cut(s)	546, 805
BsrGI	TGTACA	3 cut(s)	1093, 1761, 1780
BsrI	ACTGG	5 cut(s)	1191, 1228, 1497, 1727, 1881
BssAI	RCCGGY	2 cut(s)	546, 805
BssECI	CCNNGG	8 cut(s)	59, 186, 187, 593, 604, 1245, 1750, 2144
BssMI	GATC	8 cut(s)	175, 252, 662, 814, 950, 1057, 1693, 2096
BssNAI	GTATAC	1 cut(s)	738
BssNI	GRCGYC	2 cut(s)	231, 378
BssT1I	CCWWGG	3 cut(s)	604, 1245, 2144
Bst1107I	GTATAC	1 cut(s)	738
Bst2UI	CCWGG	8 cut(s)	188, 504, 594, 988, 1001, 1470, 2219, 2243
Bst4CI	ACNGT	9 cut(s)	373, 463, 934, 1042, 1171, 1654, 1751, 1871, 2057
Bst6I	CTCTTC	1 cut(s)	802
BstACI	GRCGYC	2 cut(s)	231, 378
BstAFI	CTTAAG	1 cut(s)	1061
BstAPI	GCANNNNNTGC	2 cut(s)	288, 334
BstAUI	TGTACA	3 cut(s)	1093, 1761, 1780
BstC8I	GCNNGC	6 cut(s)	245, 425, 548, 1475, 1927, 2265
BstDEI	CTNAG	5 cut(s)	54, 198, 474, 1191, 2107
BstDSI	CCRYGG	3 cut(s)	59, 1750, 2144
BstENI	CCTNNNNNAGG	1 cut(s)	314
BstF5I	GGATG	8 cut(s)	33, 93, 835, 1096, 1684, 1805, 1816, 2251
BstFNI	CGCG	3 cut(s)	61, 889, 1929
BstH2I	RGCGCY	2 cut(s)	12, 717
BstHHI	GCGC	3 cut(s)	11, 716, 1931
BstKTI	GATC	8 cut(s)	178, 255, 665, 817, 953, 1060, 1696, 2099
BstMAI	GTCTC	3 cut(s)	452, 1984, 2031
BstMBI	GATC	8 cut(s)	175, 252, 662, 814, 950, 1057, 1693, 2096
BstNI	CCWGG	8 cut(s)	188, 504, 594, 988, 1001, 1470, 2219, 2243
BstNSI	RCATGY	2 cut(s)	298, 1477
BstSFI	CTRYAG	2 cut(s)	418, 1314
BstUI	CGCG	3 cut(s)	61, 889, 1929
BstV1I	GCAGC	1 cut(s)	1406
BstV2I	GAAGAC	1 cut(s)	1828
BstX2I	RGATCY	6 cut(s)	175, 662, 814, 950, 1057, 2096
BstXI	CCANNNNNNTGG	1 cut(s)	994
BstYI	RGATCY	6 cut(s)	175, 662, 814, 950, 1057, 2096
BstZ17I	GTATAC	1 cut(s)	738
BsuI	GTATCC	2 cut(s)	637, 2215
BtgI	CCRYGG	3 cut(s)	59, 1750, 2144
BtrI	CACGTC	2 cut(s)	1920, 1954
BtsCI	GGATG	8 cut(s)	33, 93, 835, 1096, 1684, 1805, 1816, 2251
BtsI	GCAGTG	1 cut(s)	1897
BtsIMutI	CAGTG	6 cut(s)	388, 482, 1184, 1504, 1883, 1897
BveI	ACCTGC	2 cut(s)	309, 1505
Cac8I	GCNNGC	6 cut(s)	245, 425, 548, 1475, 1927, 2265
CaiI	CAGNNNCTG	1 cut(s)	1899
CciI	TCATGA	1 cut(s)	1986
CfoI	GCGC	3 cut(s)	11, 716, 1931
Cfr10I	RCCGGY	2 cut(s)	546, 805
Cfr13I	GGNCC	9 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616, 1879
Cfr42I	CCGCGG	1 cut(s)	62
CseI	GACGC	2 cut(s)	239, 367
Csp6I	GTAC	7 cut(s)	157, 274, 481, 528, 1094, 1762, 1781
CviQI	GTAC	7 cut(s)	157, 274, 481, 528, 1094, 1762, 1781
DdeI	CTNAG	5 cut(s)	54, 198, 474, 1191, 2107
DpnI	GATC	8 cut(s)	177, 254, 664, 816, 952, 1059, 1695, 2098
DpnII	GATC	8 cut(s)	175, 252, 662, 814, 950, 1057, 1693, 2096
DraI	TTTAAA	1 cut(s)	882
EaeI	YGGCCR	3 cut(s)	44, 1585, 1963
Eam1104I	CTCTTC	1 cut(s)	802
EarI	CTCTTC	1 cut(s)	802
EciI	GGCGGA	3 cut(s)	79, 94, 619
Eco130I	CCWWGG	3 cut(s)	604, 1245, 2144
Eco24I	GRGCYC	1 cut(s)	475
Eco31I	GGTCTC	1 cut(s)	2031
Eco32I	GATATC	1 cut(s)	2168
Eco47I	GGWCC	6 cut(s)	72, 1355, 1454, 1466, 1616, 1879
Eco57I	CTGAAG	3 cut(s)	831, 1620, 1920
Eco88I	CYCGRG	1 cut(s)	2231
EcoNI	CCTNNNNNAGG	1 cut(s)	314
EcoRII	CCWGG	8 cut(s)	186, 502, 592, 986, 999, 1468, 2217, 2241
EcoRV	GATATC	1 cut(s)	2168
EcoT14I	CCWWGG	3 cut(s)	604, 1245, 2144
EcoT38I	GRGCYC	1 cut(s)	475
ErhI	CCWWGG	3 cut(s)	604, 1245, 2144
FaqI	GGGAC	5 cut(s)	169, 234, 415, 1655, 1895
FauI	CCCGC	1 cut(s)	2024
FauNDI	CATATG	1 cut(s)	1592
FblI	GTMKAC	3 cut(s)	737, 1220, 1873
Fnu4HI	GCNGC	5 cut(s)	59, 62, 838, 1395, 2292
FokI	GGATG	8 cut(s)	20, 80, 842, 1103, 1691, 1812, 1823, 2258
FriOI	GRGCYC	1 cut(s)	475
Fsp4HI	GCNGC	5 cut(s)	59, 62, 838, 1395, 2292
FspBI	CTAG	4 cut(s)	405, 432, 1013, 1068
GlaI	GCGC	3 cut(s)	10, 715, 1930
GluI	GCNGC	5 cut(s)	59, 62, 838, 1395, 2292
GsaI	CCCAGC	3 cut(s)	308, 720, 849
GsuI	CTGGAG	1 cut(s)	1834
HaeII	RGCGCY	2 cut(s)	12, 717
HgaI	GACGC	2 cut(s)	239, 367
HhaI	GCGC	3 cut(s)	11, 716, 1931
Hin1I	GRCGYC	2 cut(s)	231, 378
Hin6I	GCGC	3 cut(s)	9, 714, 1929
HinP1I	GCGC	3 cut(s)	9, 714, 1929
HincII	GTYRAC	4 cut(s)	1488, 1542, 1689, 1874
HindII	GTYRAC	4 cut(s)	1488, 1542, 1689, 1874
HindIII	AAGCTT	4 cut(s)	768, 1204, 2079, 2271
HinfI	GANTC	5 cut(s)	222, 1408, 1824, 2214, 2227
HpaI	GTTAAC	1 cut(s)	1689
HphI	GGTGA	1 cut(s)	1642
Hpy166II	GTNNAC	8 cut(s)	738, 1096, 1221, 1488, 1542, 1568, 1689, 1874
Hpy188I	TCNGA	8 cut(s)	98, 229, 316, 639, 1026, 1241, 1458, 2124
Hpy8I	GTNNAC	8 cut(s)	738, 1096, 1221, 1488, 1542, 1568, 1689, 1874
Hpy99I	CGWCG	4 cut(s)	131, 140, 233, 377
HpyAV	CCTTC	7 cut(s)	1220, 1331, 1367, 1453, 1519, 1604, 2015
HpyCH4III	ACNGT	9 cut(s)	373, 463, 934, 1042, 1171, 1654, 1751, 1871, 2057
HpyCH4IV	ACGT	3 cut(s)	1905, 1919, 1953
HpyF3I	CTNAG	5 cut(s)	54, 198, 474, 1191, 2107
HpySE526I	ACGT	3 cut(s)	1905, 1919, 1953
Hsp92I	GRCGYC	2 cut(s)	231, 378
HspAI	GCGC	3 cut(s)	9, 714, 1929
KroI	GCCGGC	1 cut(s)	546
KroNI	GCCGGC	1 cut(s)	548
KspAI	GTTAAC	1 cut(s)	1689
KspI	CCGCGG	1 cut(s)	62
Kzo9I	GATC	8 cut(s)	175, 252, 662, 814, 950, 1057, 1693, 2096
LguI	GCTCTTC	1 cut(s)	802
LmnI	GCTCC	5 cut(s)	66, 167, 1953, 1964, 2146
Lsp1109I	GCAGC	1 cut(s)	1406
LweI	GCATC	3 cut(s)	376, 1790, 2206
MaeI	CTAG	4 cut(s)	405, 432, 1013, 1068
MaeII	ACGT	3 cut(s)	1905, 1919, 1953
MaeIII	GTNAC	6 cut(s)	509, 698, 928, 966, 1171, 1804
MalI	GATC	8 cut(s)	177, 254, 664, 816, 952, 1059, 1695, 2098
MboI	GATC	8 cut(s)	175, 252, 662, 814, 950, 1057, 1693, 2096
MboII	GAAGA	8 cut(s)	154, 789, 824, 1683, 1725, 1828, 2000, 2015
MfeI	CAATTG	1 cut(s)	2154
MflI	RGATCY	6 cut(s)	175, 662, 814, 950, 1057, 2096
MhlI	GDGCHC	3 cut(s)	475, 681, 2072
MlsI	TGGCCA	1 cut(s)	1587
MluCI	AATT	9 cut(s)	863, 975, 1417, 1629, 1755, 2043, 2129, 2154, 2253
MluNI	TGGCCA	1 cut(s)	1587
MlyI	GAGTC	1 cut(s)	216
MmeI	TCCRAC	2 cut(s)	252, 807
Mox20I	TGGCCA	1 cut(s)	1587
MroNI	GCCGGC	1 cut(s)	546
MscI	TGGCCA	1 cut(s)	1587
MseI	TTAA	9 cut(s)	821, 869, 881, 974, 1007, 1062, 1628, 1688, 2046
Msp20I	TGGCCA	1 cut(s)	1587
MspA1I	CMGCKG	1 cut(s)	61
MspCI	CTTAAG	1 cut(s)	1061
MunI	CAATTG	1 cut(s)	2154
Mva1269I	GAATGC	1 cut(s)	1201
MvaI	CCWGG	8 cut(s)	188, 504, 594, 988, 1001, 1470, 2219, 2243
MvnI	CGCG	3 cut(s)	61, 889, 1929
NaeI	GCCGGC	1 cut(s)	548
NciI	CCSGG	3 cut(s)	525, 711, 1177
NcoI	CCATGG	1 cut(s)	2144
NdeI	CATATG	1 cut(s)	1592
NdeII	GATC	8 cut(s)	175, 252, 662, 814, 950, 1057, 1693, 2096
NgoMIV	GCCGGC	1 cut(s)	546
NlaIV	GGNNCC	6 cut(s)	177, 664, 1044, 1455, 1881, 1949
NmuCI	GTSAC	2 cut(s)	509, 1804
NspI	RCATGY	2 cut(s)	298, 1477
PaeI	GCATGC	1 cut(s)	1477
PaeR7I	CTCGAG	1 cut(s)	2231
PagI	TCATGA	1 cut(s)	1986
PaqCI	CACCTGC	1 cut(s)	309
PasI	CCCWGGG	1 cut(s)	187
PciSI	GCTCTTC	1 cut(s)	802
PcsI	WCGNNNNNNNCGW	2 cut(s)	135, 2188
PctI	GAATGC	1 cut(s)	1201
PdiI	GCCGGC	1 cut(s)	548
PfeI	GAWTC	4 cut(s)	1408, 1824, 2214, 2227
PfoI	TCCNGGA	1 cut(s)	2217
PkrI	GCNGC	5 cut(s)	60, 63, 839, 1396, 2293
PleI	GAGTC	1 cut(s)	216
PpsI	GAGTC	1 cut(s)	216
PshBI	ATTAAT	1 cut(s)	1628
Psp6I	CCWGG	8 cut(s)	186, 502, 592, 986, 999, 1468, 2217, 2241
PspFI	CCCAGC	3 cut(s)	304, 716, 845
PspGI	CCWGG	8 cut(s)	186, 502, 592, 986, 999, 1468, 2217, 2241
PspN4I	GGNNCC	6 cut(s)	177, 664, 1044, 1455, 1881, 1949
PspPI	GGNCC	9 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616, 1879
PstNI	CAGNNNCTG	1 cut(s)	1899
PsuI	RGATCY	6 cut(s)	175, 662, 814, 950, 1057, 2096
RsaI	GTAC	7 cut(s)	158, 275, 482, 529, 1095, 1763, 1782
RsaNI	GTAC	7 cut(s)	157, 274, 481, 528, 1094, 1762, 1781
SacII	CCGCGG	1 cut(s)	62
SalI	GTCGAC	1 cut(s)	1872
SapI	GCTCTTC	1 cut(s)	802
SaqAI	TTAA	9 cut(s)	821, 869, 881, 974, 1007, 1062, 1628, 1688, 2046
SatI	GCNGC	5 cut(s)	59, 62, 838, 1395, 2292
Sau3AI	GATC	8 cut(s)	175, 252, 662, 814, 950, 1057, 1693, 2096
Sau96I	GGNCC	9 cut(s)	72, 307, 544, 997, 1355, 1454, 1466, 1616, 1879
SchI	GAGTC	1 cut(s)	216
SduI	GDGCHC	3 cut(s)	475, 681, 2072
SfaNI	GCATC	3 cut(s)	376, 1790, 2206
SfcI	CTRYAG	2 cut(s)	418, 1314
Sfr274I	CTCGAG	1 cut(s)	2231
Sfr303I	CCGCGG	1 cut(s)	62
SgrBI	CCGCGG	1 cut(s)	62
SinI	GGWCC	6 cut(s)	72, 1355, 1454, 1466, 1616, 1879
SlaI	CTCGAG	1 cut(s)	2231
SmlI	CTYRAG	3 cut(s)	1061, 2231, 2268
SmoI	CTYRAG	3 cut(s)	1061, 2231, 2268
SphI	GCATGC	1 cut(s)	1477
Sse9I	AATT	9 cut(s)	863, 975, 1417, 1629, 1755, 2043, 2129, 2154, 2253
SspI	AATATT	1 cut(s)	493
SspMI	CTAG	4 cut(s)	405, 432, 1013, 1068
StyI	CCWWGG	3 cut(s)	604, 1245, 2144
TaaI	ACNGT	9 cut(s)	373, 463, 934, 1042, 1171, 1654, 1751, 1871, 2057
TaiI	ACGT	3 cut(s)	1908, 1922, 1956
TaqI	TCGA	5 cut(s)	135, 1662, 1711, 1873, 2232
TaqII	GACCGA	1 cut(s)	1559
TasI	AATT	9 cut(s)	863, 975, 1417, 1629, 1755, 2043, 2129, 2154, 2253
TatI	WGTACW	4 cut(s)	156, 1093, 1761, 1780
TauI	GCSGC	3 cut(s)	61, 64, 840
TfiI	GAWTC	4 cut(s)	1408, 1824, 2214, 2227
Tru1I	TTAA	9 cut(s)	821, 869, 881, 974, 1007, 1062, 1628, 1688, 2046
Tru9I	TTAA	9 cut(s)	821, 869, 881, 974, 1007, 1062, 1628, 1688, 2046
TscAI	CASTG	6 cut(s)	388, 482, 1191, 1504, 1890, 1904
TseFI	GTSAC	2 cut(s)	509, 1804
TseI	GCWGC	2 cut(s)	1394, 2291
Tsp45I	GTSAC	2 cut(s)	509, 1804
TspDTI	ATGAA	3 cut(s)	1430, 1975, 2015
TspGWI	ACGGA	5 cut(s)	188, 228, 256, 1823, 2180
TspRI	CASTG	6 cut(s)	388, 482, 1191, 1504, 1890, 1904
Vha464I	CTTAAG	1 cut(s)	1061
VpaK11BI	GGWCC	6 cut(s)	72, 1355, 1454, 1466, 1616, 1879
VspI	ATTAAT	1 cut(s)	1628
XagI	CCTNNNNNAGG	1 cut(s)	314
XapI	RAATTY	2 cut(s)	1417, 1755
XbaI	TCTAGA	1 cut(s)	1012
XceI	RCATGY	2 cut(s)	298, 1477
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1286, 1504
XhoI	CTCGAG	1 cut(s)	2231
XmiI	GTMKAC	3 cut(s)	737, 1220, 1873
XspI	CTAG	4 cut(s)	405, 432, 1013, 1068

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.