Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0010348

Physical Location & Seq

Genomic Coordinates Forward (+)

2676418 .. 2684430

Gene Structure 8013 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1023400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3975 bp

ATGAAGCACTTCATGCAGCCGAGAAACACGATATTGAGGGAGACGACGGAGCCTCCCTCGTCGCCAAACCCTAGCTCCGTCAAGGCCAAGCCACCTCGGAAGCCCAAGGCCTCCAAGGAGAACACTCCGCCGTCCGATCTGAGCTCCATGATCTCCGATTCAAAACCTTCGCCTGCCGCGAAGTTGAAGAGCCCATTGCCGCCTCGGCCACCGTCGTCGAACCCTCTCAAGCGGAAGCTCAGCGTTGACTCTCAGACTGAAAACTCCGCCGCTGGAACCTCCGATTCTGGTGTCCAGGTAGTGGTGAGAATGCGACCACCACGAAAGGACAAGGATGAAGGAGATATGATGGTGCAGAAATTATCTAGTGACTCTTTGTCGATAAATGGCCAGACCTTCACGTTTGACTCGGTTTGCGACGCAGACGCATCACAGCTAGATATTTTCCAGCTTGTAGGAGCACCTCTTGTTGAAAATTGTATGGCAGGTTTTAACAGTTCTGTATTTGCATACGGACAGACAGGAAGTGGAAAGACATATACCATGTGGGGTCCAGCCAATGCATTGATGGATGAGAATCTATCAAGTGATCAACAAGGGTTAACCCCCCGTGTTCTTGAGCATCTTTTTGCTCGCTTAAATGAGGAGCAAATCAAGCATGCTGACAAAGAACTCAAGTATCAGTGCCACTGTTCTTTTCTTGAGATTTACAATGAACAAATCACAGATCTTTTGGATCCAAATCAAAAAAGCCTTCAGATAAGAGAAGATGTTAAATCAGGTGTTTATGTCGAAAATCTCACCGAGGAGTGTGTACGTACAATCAAAGATGTGACTCAGCTTTTGATAAAGGGTTTGTCAAACAGGAGAACAGGTTCAACTAGTATCAATGCTGAGAGTTCCCGCTCACATACTGTATTTACATGTGTTGTTGAATCTCAATGCAAGAATGTGACAAATGGTATAAGCTTTAAAACCAGTAGAATAAATCTTGTTGATCTAGCTGGATCAGAACGTCAGAAGTTAACAGGGGCAGCAGGAGAGCGCTTGAAGGAAGCAGGGAATATCAATCGATCACTCTCACAGCTTGGGAACCTGATAAACATTCTTGCTGAAATTTCTCAAACGGGAAAGCAAAGGCATATTCCCTATAGAGATTCCAGGCTTACATTCTTATTACAGGAATCTCTCGGTGGAAATGCAAAATTAGCAATGGTCTGTGCTATTTCTCCAACACAAAGCTGTAAGAGTGAGACTTTCAGTACATTGAGATTTGCACAGCGGGCTAAGGCTATCAAGAACAAGGCAGTTGTTAATGAAGTAATGCAGGAAGACGTGAATCAGTTGCGCGAGGTGATACGACAGCTTAGGGATGAACTACGGCGGATTAAGGCACACGGAAACAACCCAGCTGCTTCAAATGGGGGTCACAGTGCAGCATGGTTTCGTCAAAGTTTGAATATGCTAAAGGCTAGCCTTAAACCTACGATGACATTACCCCATGTCGATGATGACAGTGATGAGGACATGGAAATTGATGAGGAAGCTGTTGAGAGGCTTTGTGCTGAAGTAAGTAACCAGACAGTTGTCAGTGAAGCTAACAGAGCTGATGTGAACAGTGTAGAAACAATGAAATCACATTCACAACTTGTGGCTGTTGAAATTGGAAGCTCCGAAGGTCCTCAAAACCATGCATCTGGAAGTGGTTGTATCAAAGAACAAGGTGTTGATACAGATGTTAATATGGAAGAAGGAATCTCTGAACAAGAAGGGGACATGATTGTTGAATGTGGTACCAGCACCCCAGTTATTCCCAGTGCTAGTGCATCAGATATTCACAATCTTATAGAAGATACCTCCATGCCGCCTGTTCAGGAGGAAAATATTCTAAGGTCCTCCATTAGTGATTTTCTAATTGAAGAATCAGCCTGCAAAAGTGCGGAGAAAGGTTCCTCATGTGCAGCCTCTGATCCTCCTGGAAGCATGCCTGGCTGCCTTTCAGTTGCAGATGAATGCATTGGTTCTTCAAATGGCTCAGTTAACTGTGTTTCTCCATGCCTGAGCATAGTTCCATGCGACGCACCCCAAGTTCTAAAGTCTCCTACCCCCAGTGTTTCACCCAAGGTCAATGCCAGCAGGAAAAGTTTGAGGACCTCCTCAATGTTGACTGCTTCTCAGAAGGATCTTACTGGTGGGAGTACGTTAAGCCCAGACAGCATGCGCATATCTTTGGCAAAACCTGCAATAAAGAGCTCACCAAATGACCTATCTGCTCAAACATGTAATAACTTTTCGGCACCCACTGAACAGTTGGCAGCAAGCATTCGGCATGGCCTTGAAATTATTGGTAGTCACCGCCAAAGTTCAGCTTTAAGGAAGTCGTCATTTAGGTTTTCATTGAAACCTTCAGAGTCTAGGGTGATTGTGCCAGTTTCTAAAGCTGATGTGGGAGTACAAACTAGTCAAGAAATAGTAAAAGAAGGTTCAGTGGAGTTTATGTGTAGTAATTGCAAGAACAGGATGCAGCTAGAAGTTGAGGCCAATGAAATTATGCAATTGGTACCTGTTGATGGATCAGAGTCTGCTGACAAATCCAAGATACAAGTTCCCAAAGCTGTGGAGAAGGTTTTAGCTGGGGCTATTAGGAGAGAAATGGCATTAGAAGACATATGTGCCAAGAAAACTTCTGAAATTATGCAGCTAAACCGATTGGTTCAGCAGTACAAGCATGAGAGAGAATGCAATGGCATTATAGCCCAGACAAGGGAGGATAAGATTCTACGCCTTGAGAGCCTCATGGATGGTGTTTTACCGACTGAGGAGTTCATGGAGGAAGAGCTAGTGTCTCTCACACACGAGTATAAGATTTTGAAGGAGAAATACGAGAATCACCCAGAACTTTTAAGGACAAATATTGAATTGAAAAGAGTTCAAGATGAGCTGGAAAATTTACGAAACTTTTGTGATATGGGTGAAAGGGAAGTGTTGTTGGAAGAGATTCAAGATTTAAGAAGCCAGCTACAGTATTATGTAGACTGTCCATCCACATCAGCCCGGACACGAAACTCTATGATGAAGTTGACCCATTCACGTGACCCAAATGTGGCCCCTCTCAGTACAATTTCGGAGTCAAATGAGGAAAGCTCTGAACATAAACTTGAACAAGAGAGACAAGAGTGGAATGAGGTAGAAAGTAAGTGGATATCTCTTGCTGAGGAATTAAGAATGGAACTTGAGGCTAGCAGATCACTGGCAGAAAAGACAATGCAAGAATTAGAAACTGAAAAGAAATGTGCAGACGAGCTCAAGGAAGCAATACAACTGGCTATGGAGGGGCAATCACGGATGTTGGAACAGTATGCAGATTTGGAAGAGAAACATATGCAACTGCTTGCGAGGCATAGAATGATACGGGATGGAGTGGAGGATGTGAAGAAAGCAGCTGCTAAGGCAGGAGTCAGGGGTGCCGAGTCCAAATTCATAAATGCTATCGCTGCAGAAATTTCAGCATTGAGAGTAGAAAGAGAAAGAGAGAGGCGATATCTGAGGGACGAAAATAAGGGGCTTCAGGCACAATTGCGGGATACTGCTGAAGCTGTGCAGGCTGCAGGCGAATTACTCGTGCGACTCAAAGAAGCAGATGAGGCTGTTGCAACTGCTCAGAAGCAAGCAATGGAGGCCAAGCAAGAAGCAGACAAGGCTTACATGAATATTGAAAAACTGAAGAAAAAACATGAGAAGGAGATCAGCAGTCTTAATGAGCTCATTGCCGAGTCTCGTTTACCCAAAGAAGCAACCCAACCTGCTTATGACGGTTCCAATATGGCAAAATACGATGCAGGTGAGCCCCATAGCTTAAGTGATCAAAGATGGAGGGAGGAATTTGAACCATTCTACAATGGGGAAGAGGGCGAGTTGCGGAAACTCGCCCAACCCTCATCATGGTTCTCTGGTTACGACCGATGCAACATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000280 GO:0000910 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007112 GO:0007140 GO:0007275 GO:0007276 GO:0008150 GO:0008574 GO:0009524 GO:0009555 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033206 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048285 GO:0048609 GO:0048856 GO:0051301 GO:0051321 GO:0051704 GO:0055046 GO:0061640 GO:0071840 GO:0080175 GO:0140013 GO:1903046 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1325

Amino Acids

146.58

Weight (kDa)

5.37

Isoelectric Point (pI)

51.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	99 - 245	4.5e-21	Microtubule binding
Kinesin	PF00225	119 - 432	8.5e-108	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010348)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23670 AT3G23670 AT4G14150
fragaria_vesca	FvH4_4g12770 FvH4_4g12770
malus_domestica	MD04G1023400.v1.1 MD13G1280700.v1.1
prunus_persica	Prupe.1G173100_v2.0.a1
pyrus_communis	pycom04g01990 pycom13g29270
rosa_chinensis	RchiOBHm_Chr4g0412101
rosa_laevigata	RLG00000008323
rosa_multiflora	Rmu_co8521685.1_g000001 Rmu_sc0004447.1_g000004
rosa_roxburghii	Rroxscaffold_5G00356370
rosa_rugosa	Rorug04G0106600
rosa_samantha	Rh4AG171300 Rh4BG170100 Rh4CG182200 Rh4DG165600
rosa_wichuraiana	Rw4G014280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3830
Acc16I	TGCGCA	1 cut(s)	2222
Acc36I	ACCTGC	4 cut(s)	476, 2248, 3811, 3830
Acc65I	GGTACC	2 cut(s)	1793, 2560
AccB1I	GGYRCC	4 cut(s)	1793, 2296, 2560, 3464
AccB7I	CCANNNNNTGG	1 cut(s)	301
AccBSI	CCGCTC	1 cut(s)	906
AccI	GTMKAC	1 cut(s)	3033
AccII	CGCG	2 cut(s)	179, 1350
AclWI	GGATC	6 cut(s)	731, 744, 1015, 1964, 2190, 2581
AcoI	YGGCCR	2 cut(s)	206, 388
AcsI	RAATTY	5 cut(s)	1116, 2947, 3476, 3501, 3881
AcuI	CTGAAG	6 cut(s)	740, 1587, 2391, 3551, 3612, 3743
AcvI	CACGTG	1 cut(s)	3092
AfaI	GTAC	9 cut(s)	816, 820, 1264, 1795, 2200, 2454, 2562, 2723, 3118
AfeI	AGCGCT	1 cut(s)	1046
AfiI	CCNNNNNNNGG	6 cut(s)	301, 2570, 2763, 2764, 3103, 3942
AflII	CTTAAG	1 cut(s)	3856
AflIII	ACRYGT	2 cut(s)	923, 2279
AhdI	GACNNNNNGTC	1 cut(s)	376
AhlI	ACTAGT	2 cut(s)	881, 2459
AjiI	CACGTC	1 cut(s)	1336
AjnI	CCWGG	4 cut(s)	294, 1160, 1975, 1987
AloI	GAACNNNNNNTCC	2 cut(s)	859, 891
Alw21I	GWGCWC	5 cut(s)	146, 463, 2255, 3306, 3765
Alw26I	GTCTC	6 cut(s)	35, 1247, 2103, 2850, 3163, 3780
AlwI	GGATC	6 cut(s)	731, 744, 1015, 1964, 2190, 2581
AlwNI	CAGNNNCTG	2 cut(s)	1967, 2582
Aor51HI	AGCGCT	1 cut(s)	1046
AoxI	GGCC	8 cut(s)	84, 108, 206, 388, 2332, 2538, 3105, 3678
ApoI	RAATTY	5 cut(s)	1116, 2947, 3476, 3501, 3881
ArsI	GACNNNNNNTTYG	2 cut(s)	826, 858
Asp700I	GAANNNNTTC	4 cut(s)	8, 874, 1884, 2997
Asp718I	GGTACC	2 cut(s)	1793, 2560
AspLEI	GCGC	3 cut(s)	1047, 1350, 2223
AspS9I	GGNCC	5 cut(s)	551, 1679, 1893, 2151, 3106
AsuC2I	CCSGG	1 cut(s)	3055
AsuNHI	GCTAGC	2 cut(s)	1472, 3239
AvaII	GGWCC	4 cut(s)	551, 1679, 1893, 2151
BaeI	ACNNNNGTAYC	4 cut(s)	662, 695, 1722, 1755
BalI	TGGCCA	1 cut(s)	390
BamHI	GGATCC	1 cut(s)	736
BanI	GGYRCC	4 cut(s)	1793, 2296, 2560, 3464
BanII	GRGCYC	6 cut(s)	146, 194, 2255, 3306, 3765, 3849
BarI	GAAGNNNNNNTAC	2 cut(s)	2864, 2896
BauI	CACGAG	2 cut(s)	2855, 3620
BbrPI	CACGTG	1 cut(s)	3092
BbsI	GAAGAC	2 cut(s)	1338, 2670
Bbv12I	GWGCWC	5 cut(s)	146, 463, 2255, 3306, 3765
BbvCI	CCTCAGC	1 cut(s)	3213
BccI	CCATC	7 cut(s)	343, 562, 2564, 2795, 3049, 3410, 3864
BceAI	ACGGC	2 cut(s)	115, 1397
BciT130I	CCWGG	4 cut(s)	296, 1162, 1977, 1989
BciVI	GTATCC	1 cut(s)	3577
BclI	TGATCA	2 cut(s)	589, 3862
BcnI	CCSGG	1 cut(s)	3055
BcoDI	GTCTC	6 cut(s)	35, 1247, 2103, 2850, 3163, 3780
BcuI	ACTAGT	2 cut(s)	881, 2459
BfmI	CTRYAG	4 cut(s)	1150, 3020, 3495, 3606
BfoI	RGCGCY	1 cut(s)	1048
BfrI	CTTAAG	1 cut(s)	3856
BfuAI	ACCTGC	4 cut(s)	476, 2248, 3811, 3830
BfuI	GTATCC	1 cut(s)	3577
BglI	GCCNNNNNGGC	1 cut(s)	205
BglII	AGATCT	1 cut(s)	727
BlpI	GCTNAGC	1 cut(s)	239
Bme1390I	CCNGG	5 cut(s)	296, 1162, 1977, 1989, 3055
Bme18I	GGWCC	4 cut(s)	551, 1679, 1893, 2151
BmeRI	GACNNNNNGTC	1 cut(s)	376
BmgBI	CACGTC	1 cut(s)	1336
BmgT120I	GGNCC	5 cut(s)	551, 1679, 1893, 2151, 3106
BmrFI	CCNGG	5 cut(s)	296, 1162, 1977, 1989, 3055
BmrI	ACTGGG	3 cut(s)	1799, 1809, 2103
BmsI	GCATC	7 cut(s)	437, 631, 1703, 1835, 2511, 3826, 3953
BmtI	GCTAGC	2 cut(s)	1476, 3243
BmuI	ACTGGG	3 cut(s)	1799, 1809, 2103
BoxI	GACNNNNGTC	1 cut(s)	1586
BpiI	GAAGAC	2 cut(s)	1338, 2670
BplI	GAGNNNNNCTC	4 cut(s)	41, 73, 3128, 3160
Bpu10I	CCTNAGC	5 cut(s)	1287, 1367, 2060, 3213, 3447
Bpu1102I	GCTNAGC	1 cut(s)	239
BpuEI	CTTGAG	7 cut(s)	212, 638, 659, 722, 2807, 3254, 3290
BpuMI	CCSGG	1 cut(s)	3055
Bsa29I	ATCGAT	1 cut(s)	1072
BsaAI	YACGTR	2 cut(s)	818, 3092
BsaBI	GATNNNNATC	2 cut(s)	576, 741
BsaJI	CCNNGG	6 cut(s)	95, 105, 114, 203, 804, 2121
BsaXI	ACNNNNNCTCC	8 cut(s)	37, 59, 67, 89, 859, 889, 2483, 2513
Bsc4I	CCNNNNNNNGG	6 cut(s)	301, 2570, 2763, 2764, 3103, 3942
Bse1I	ACTGG	8 cut(s)	978, 1805, 1815, 2109, 2194, 2429, 3255, 3327
Bse3DI	GCAATG	5 cut(s)	194, 1218, 2749, 3678, 3765
Bse8I	GATNNNNATC	2 cut(s)	576, 741
BseBI	CCWGG	4 cut(s)	296, 1162, 1977, 1989
BseCI	ATCGAT	1 cut(s)	1072
BseDI	CCNNGG	6 cut(s)	95, 105, 114, 203, 804, 2121
BseGI	GGATG	9 cut(s)	340, 577, 1378, 2526, 2806, 3041, 3351, 3421, 3433
BseJI	GATNNNNATC	2 cut(s)	576, 741
BseLI	CCNNNNNNNGG	6 cut(s)	301, 2570, 2763, 2764, 3103, 3942
BseMI	GCAATG	5 cut(s)	194, 1218, 2749, 3678, 3765
BseNI	ACTGG	8 cut(s)	978, 1805, 1815, 2109, 2194, 2429, 3255, 3327
BseRI	GAGGAG	4 cut(s)	659, 821, 2146, 2834
BseYI	CCCAGC	2 cut(s)	1408, 2633
BsgI	GTGCAG	5 cut(s)	374, 1455, 1980, 3315, 3620
Bsh1236I	CGCG	2 cut(s)	179, 1350
Bsh1285I	CGRYCG	1 cut(s)	3961
BshFI	GGCC	8 cut(s)	86, 110, 208, 390, 2334, 2540, 3107, 3680
BshNI	GGYRCC	4 cut(s)	1793, 2296, 2560, 3464
BshVI	ATCGAT	1 cut(s)	1072
BsiEI	CGRYCG	1 cut(s)	3961
BsiHKAI	GWGCWC	5 cut(s)	146, 463, 2255, 3306, 3765
BsiSI	CCGG	1 cut(s)	3055
BslFI	GGGAC	2 cut(s)	1787, 3563
BslI	CCNNNNNNNGG	6 cut(s)	301, 2570, 2763, 2764, 3103, 3942
BsmAI	GTCTC	6 cut(s)	35, 1247, 2103, 2850, 3163, 3780
BsmBI	CGTCTC	1 cut(s)	35
BsmFI	GGGAC	2 cut(s)	1787, 3563
BsmI	GAATGC	4 cut(s)	315, 2018, 2322, 2744
BsnI	GGCC	8 cut(s)	86, 110, 208, 390, 2334, 2540, 3107, 3680
Bsp1286I	GDGCHC	7 cut(s)	146, 194, 463, 2255, 3306, 3765, 3849
Bsp1720I	GCTNAGC	1 cut(s)	239
BspANI	GGCC	8 cut(s)	86, 110, 208, 390, 2334, 2540, 3107, 3680
BspDI	ATCGAT	1 cut(s)	1072
BspFNI	CGCG	2 cut(s)	179, 1350
BspMAI	CTGCAG	2 cut(s)	3499, 3610
BspMI	ACCTGC	4 cut(s)	476, 2248, 3811, 3830
BspOI	GCTAGC	2 cut(s)	1476, 3243
BspPI	GGATC	6 cut(s)	731, 744, 1015, 1964, 2190, 2581
BspQI	GCTCTTC	2 cut(s)	182, 2829
BspT107I	GGYRCC	4 cut(s)	1793, 2296, 2560, 3464
BspTI	CTTAAG	1 cut(s)	3856
BsrBI	CCGCTC	1 cut(s)	906
BsrDI	GCAATG	5 cut(s)	194, 1218, 2749, 3678, 3765
BsrI	ACTGG	8 cut(s)	978, 1805, 1815, 2109, 2194, 2429, 3255, 3327
BssECI	CCNNGG	6 cut(s)	95, 105, 114, 203, 804, 2121
BssSI	CACGAG	2 cut(s)	2855, 3620
BssT1I	CCWWGG	3 cut(s)	105, 114, 2121
Bst2BI	CACGAG	2 cut(s)	2855, 3620
Bst2UI	CCWGG	4 cut(s)	296, 1162, 1977, 1989
Bst6I	CTCTTC	5 cut(s)	182, 2829, 2988, 3366, 3900
BstAFI	CTTAAG	1 cut(s)	3856
BstAPI	GCANNNNNTGC	2 cut(s)	13, 2240
BstBAI	YACGTR	2 cut(s)	818, 3092
BstF5I	GGATG	9 cut(s)	340, 577, 1378, 2526, 2806, 3041, 3351, 3421, 3433
BstFNI	CGCG	2 cut(s)	179, 1350
BstH2I	RGCGCY	1 cut(s)	1048
BstHHI	GCGC	3 cut(s)	1047, 1350, 2223
BstMAI	GTCTC	6 cut(s)	35, 1247, 2103, 2850, 3163, 3780
BstMCI	CGRYCG	1 cut(s)	3961
BstNI	CCWGG	4 cut(s)	296, 1162, 1977, 1989
BstNSI	RCATGY	5 cut(s)	662, 927, 1987, 2221, 2283
BstPAI	GACNNNNGTC	1 cut(s)	1586
BstSCI	CCNGG	5 cut(s)	294, 1160, 1975, 1987, 3053
BstSFI	CTRYAG	4 cut(s)	1150, 3020, 3495, 3606
BstSNI	TACGTA	1 cut(s)	818
BstUI	CGCG	2 cut(s)	179, 1350
BstV2I	GAAGAC	2 cut(s)	1338, 2670
BstX2I	RGATCY	3 cut(s)	727, 736, 2182
BstXI	CCANNNNNNTGG	2 cut(s)	1697, 2617
BstYI	RGATCY	3 cut(s)	727, 736, 2182
Bsu15I	ATCGAT	1 cut(s)	1072
BsuI	GTATCC	1 cut(s)	3577
BsuRI	GGCC	8 cut(s)	86, 110, 208, 390, 2334, 2540, 3107, 3680
BsuTUI	ATCGAT	1 cut(s)	1072
BtrI	CACGTC	1 cut(s)	1336
BtsCI	GGATG	9 cut(s)	340, 577, 1378, 2526, 2806, 3041, 3351, 3421, 3433
BveI	ACCTGC	4 cut(s)	476, 2248, 3811, 3830
CaiI	CAGNNNCTG	2 cut(s)	1967, 2582
CfoI	GCGC	3 cut(s)	1047, 1350, 2223
Cfr13I	GGNCC	5 cut(s)	551, 1679, 1893, 2151, 3106
ClaI	ATCGAT	1 cut(s)	1072
CseI	GACGC	3 cut(s)	428, 434, 2087
Csp6I	GTAC	9 cut(s)	815, 819, 1263, 1794, 2199, 2453, 2561, 2722, 3117
CviQI	GTAC	9 cut(s)	815, 819, 1263, 1794, 2199, 2453, 2561, 2722, 3117
DraI	TTTAAA	1 cut(s)	973
DriI	GACNNNNNGTC	1 cut(s)	376
EaeI	YGGCCR	2 cut(s)	206, 388
Eam1104I	CTCTTC	5 cut(s)	182, 2829, 2988, 3366, 3900
Eam1105I	GACNNNNNGTC	1 cut(s)	376
EarI	CTCTTC	5 cut(s)	182, 2829, 2988, 3366, 3900
EciI	GGCGGA	3 cut(s)	117, 256, 1399
Ecl136II	GAGCTC	4 cut(s)	144, 2253, 3304, 3763
Eco105I	TACGTA	1 cut(s)	818
Eco130I	CCWWGG	3 cut(s)	105, 114, 2121
Eco147I	AGGCCT	1 cut(s)	110
Eco24I	GRGCYC	6 cut(s)	146, 194, 2255, 3306, 3765, 3849
Eco32I	GATATC	2 cut(s)	3204, 3542
Eco47I	GGWCC	4 cut(s)	551, 1679, 1893, 2151
Eco47III	AGCGCT	1 cut(s)	1046
Eco53kI	GAGCTC	4 cut(s)	144, 2253, 3304, 3763
Eco57I	CTGAAG	6 cut(s)	740, 1587, 2391, 3551, 3612, 3743
Eco72I	CACGTG	1 cut(s)	3092
EcoICRI	GAGCTC	4 cut(s)	144, 2253, 3304, 3763
EcoO109I	RGGNCCY	3 cut(s)	1679, 1893, 2151
EcoRII	CCWGG	4 cut(s)	294, 1160, 1975, 1987
EcoRV	GATATC	2 cut(s)	3204, 3542
EcoT14I	CCWWGG	3 cut(s)	105, 114, 2121
EcoT22I	ATGCAT	3 cut(s)	565, 1696, 2018
EcoT38I	GRGCYC	6 cut(s)	146, 194, 2255, 3306, 3765, 3849
ErhI	CCWWGG	3 cut(s)	105, 114, 2121
Esp3I	CGTCTC	1 cut(s)	35
FalI	AAGNNNNNCTT	2 cut(s)	2353, 2385
FaqI	GGGAC	2 cut(s)	1787, 3563
FauI	CCCGC	3 cut(s)	911, 1275, 3573
FauNDI	CATATG	2 cut(s)	2669, 3381
FbaI	TGATCA	2 cut(s)	589, 3862
FblI	GTMKAC	1 cut(s)	3033
FokI	GGATG	9 cut(s)	347, 584, 1385, 2533, 2813, 3028, 3358, 3428, 3440
FriOI	GRGCYC	6 cut(s)	146, 194, 2255, 3306, 3765, 3849
FspAI	RTGCGCAY	1 cut(s)	2222
FspI	TGCGCA	1 cut(s)	2222
GlaI	GCGC	3 cut(s)	1046, 1349, 2222
GsaI	CCCAGC	2 cut(s)	1412, 2637
HaeII	RGCGCY	1 cut(s)	1048
HaeIII	GGCC	8 cut(s)	86, 110, 208, 390, 2334, 2540, 3107, 3680
HapII	CCGG	1 cut(s)	3055
HgaI	GACGC	3 cut(s)	428, 434, 2087
HhaI	GCGC	3 cut(s)	1047, 1350, 2223
Hin6I	GCGC	3 cut(s)	1045, 1348, 2221
HinP1I	GCGC	3 cut(s)	1045, 1348, 2221
HincII	GTYRAC	6 cut(s)	247, 603, 1026, 2041, 2166, 3081
HindII	GTYRAC	6 cut(s)	247, 603, 1026, 2041, 2166, 3081
HindIII	AAGCTT	1 cut(s)	967
HpaI	GTTAAC	3 cut(s)	603, 1026, 2041
HpaII	CCGG	1 cut(s)	3055
Hpy188III	TCNNGA	8 cut(s)	617, 701, 1297, 1698, 1874, 2465, 2933, 3002
Hpy99I	CGWCG	6 cut(s)	49, 64, 217, 220, 422, 2081
HpyCH4IV	ACGT	6 cut(s)	401, 817, 1015, 1335, 2201, 3091
HpySE526I	ACGT	6 cut(s)	401, 817, 1015, 1335, 2201, 3091
HspAI	GCGC	3 cut(s)	1045, 1348, 2221
KpnI	GGTACC	2 cut(s)	1797, 2564
Ksp22I	TGATCA	2 cut(s)	589, 3862
KspAI	GTTAAC	3 cut(s)	603, 1026, 2041
LguI	GCTCTTC	2 cut(s)	182, 2829
LmnI	GCTCC	6 cut(s)	49, 80, 149, 458, 646, 1676
LweI	GCATC	7 cut(s)	437, 631, 1703, 1835, 2511, 3826, 3953
MaeII	ACGT	6 cut(s)	401, 817, 1015, 1335, 2201, 3091
MaeIII	GTNAC	8 cut(s)	368, 832, 952, 1427, 1574, 2351, 3092, 3953
MbiI	CCGCTC	1 cut(s)	906
MfeI	CAATTG	2 cut(s)	2555, 3575
MflI	RGATCY	3 cut(s)	727, 736, 2182
MhlI	GDGCHC	7 cut(s)	146, 194, 463, 2255, 3306, 3765, 3849
MlsI	TGGCCA	1 cut(s)	390
MluNI	TGGCCA	1 cut(s)	390
MmeI	TCCRAC	3 cut(s)	1256, 2970, 3330
Mox20I	TGGCCA	1 cut(s)	390
Mph1103I	ATGCAT	3 cut(s)	565, 1696, 2018
MroXI	GAANNNNTTC	4 cut(s)	8, 874, 1884, 2997
MscI	TGGCCA	1 cut(s)	390
MslI	CAYNNNNRTG	2 cut(s)	1506, 3090
Msp20I	TGGCCA	1 cut(s)	390
MspA1I	CMGCKG	4 cut(s)	272, 1282, 1412, 3443
MspCI	CTTAAG	1 cut(s)	3856
MspI	CCGG	1 cut(s)	3055
MspR9I	CCNGG	5 cut(s)	296, 1162, 1977, 1989, 3055
MunI	CAATTG	2 cut(s)	2555, 3575
Mva1269I	GAATGC	4 cut(s)	315, 2018, 2322, 2744
MvaI	CCWGG	4 cut(s)	296, 1162, 1977, 1989
MvnI	CGCG	2 cut(s)	179, 1350
NciI	CCSGG	1 cut(s)	3055
NdeI	CATATG	2 cut(s)	2669, 3381
NheI	GCTAGC	2 cut(s)	1472, 3239
NmeAIII	GCCGAG	4 cut(s)	45, 184, 3493, 3796
NmuCI	GTSAC	6 cut(s)	368, 832, 952, 1427, 2351, 3092
NsbI	TGCGCA	1 cut(s)	2222
NsiI	ATGCAT	3 cut(s)	565, 1696, 2018
NspI	RCATGY	5 cut(s)	662, 927, 1987, 2221, 2283
PaeI	GCATGC	3 cut(s)	662, 1987, 2221
PaqCI	CACCTGC	1 cut(s)	3830
PceI	AGGCCT	1 cut(s)	110
PciI	ACATGT	2 cut(s)	923, 2279
PciSI	GCTCTTC	2 cut(s)	182, 2829
PcsI	WCGNNNNNNNCGW	1 cut(s)	176
PctI	GAATGC	4 cut(s)	315, 2018, 2322, 2744
PdmI	GAANNNNTTC	4 cut(s)	8, 874, 1884, 2997
PflMI	CCANNNNNTGG	1 cut(s)	301
PfoI	TCCNGGA	1 cut(s)	1975
PmaCI	CACGTG	1 cut(s)	3092
PmlI	CACGTG	1 cut(s)	3092
Ppu21I	YACGTR	2 cut(s)	818, 3092
PpuMI	RGGWCCY	3 cut(s)	1679, 1893, 2151
PscI	ACATGT	2 cut(s)	923, 2279
PshAI	GACNNNNGTC	1 cut(s)	1586
Psp124BI	GAGCTC	4 cut(s)	146, 2255, 3306, 3765
Psp5II	RGGWCCY	3 cut(s)	1679, 1893, 2151
Psp6I	CCWGG	4 cut(s)	294, 1160, 1975, 1987
PspCI	CACGTG	1 cut(s)	3092
PspFI	CCCAGC	2 cut(s)	1408, 2633
PspGI	CCWGG	4 cut(s)	294, 1160, 1975, 1987
PspPI	GGNCC	5 cut(s)	551, 1679, 1893, 2151, 3106
PspPPI	RGGWCCY	3 cut(s)	1679, 1893, 2151
PstI	CTGCAG	2 cut(s)	3499, 3610
PstNI	CAGNNNCTG	2 cut(s)	1967, 2582
PsuI	RGATCY	3 cut(s)	727, 736, 2182
PvuII	CAGCTG	2 cut(s)	1412, 3443
RsaI	GTAC	9 cut(s)	816, 820, 1264, 1795, 2200, 2454, 2562, 2723, 3118
RsaNI	GTAC	9 cut(s)	815, 819, 1263, 1794, 2199, 2453, 2561, 2722, 3117
RseI	CAYNNNNRTG	2 cut(s)	1506, 3090
SacI	GAGCTC	4 cut(s)	146, 2255, 3306, 3765
SapI	GCTCTTC	2 cut(s)	182, 2829
Sau96I	GGNCC	5 cut(s)	551, 1679, 1893, 2151, 3106
ScrFI	CCNGG	5 cut(s)	296, 1162, 1977, 1989, 3055
SduI	GDGCHC	7 cut(s)	146, 194, 463, 2255, 3306, 3765, 3849
SfaNI	GCATC	7 cut(s)	437, 631, 1703, 1835, 2511, 3826, 3953
SfcI	CTRYAG	4 cut(s)	1150, 3020, 3495, 3606
SinI	GGWCC	4 cut(s)	551, 1679, 1893, 2151
SmiMI	CAYNNNNRTG	2 cut(s)	1506, 3090
SmlI	CTYRAG	8 cut(s)	227, 617, 674, 701, 2786, 3233, 3305, 3856
SmoI	CTYRAG	8 cut(s)	227, 617, 674, 701, 2786, 3233, 3305, 3856
SnaBI	TACGTA	1 cut(s)	818
SpeI	ACTAGT	2 cut(s)	881, 2459
SphI	GCATGC	3 cut(s)	662, 1987, 2221
SseBI	AGGCCT	1 cut(s)	110
SspI	AATATT	3 cut(s)	1885, 2914, 3712
SstI	GAGCTC	4 cut(s)	146, 2255, 3306, 3765
StuI	AGGCCT	1 cut(s)	110
StyD4I	CCNGG	5 cut(s)	294, 1160, 1975, 1987, 3053
StyI	CCWWGG	3 cut(s)	105, 114, 2121
TaiI	ACGT	6 cut(s)	404, 820, 1018, 1338, 2204, 3094
TaqI	TCGA	5 cut(s)	218, 380, 792, 1072, 1506
TaqII	GACCGA	1 cut(s)	3975
TatI	WGTACW	4 cut(s)	1262, 2452, 2721, 3116
TauI	GCSGC	4 cut(s)	179, 202, 272, 1867
TseFI	GTSAC	6 cut(s)	368, 832, 952, 1427, 2351, 3092
Tsp45I	GTSAC	6 cut(s)	368, 832, 952, 1427, 2351, 3092
TspGWI	ACGGA	5 cut(s)	62, 67, 528, 1413, 3358
Van91I	CCANNNNNTGG	1 cut(s)	301
Vha464I	CTTAAG	1 cut(s)	3856
VpaK11BI	GGWCC	4 cut(s)	551, 1679, 1893, 2151
XapI	RAATTY	5 cut(s)	1116, 2947, 3476, 3501, 3881
XceI	RCATGY	5 cut(s)	662, 927, 1987, 2221, 2283
XcmI	CCANNNNNNNNNTGG	2 cut(s)	565, 2308
XmiI	GTMKAC	1 cut(s)	3033
XmnI	GAANNNNTTC	4 cut(s)	8, 874, 1884, 2997
Zsp2I	ATGCAT	3 cut(s)	565, 1696, 2018

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.