Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8521685.1

Orthogroup ID

OG0010348

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 6350

Gene Structure 6350 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8521685.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3147 bp

gggttgtcaaacaggaggactggttcaactagtatcaatgcggacagttctcgctcacatactgtttttacctgtgttgttgaatctcgatacaagagtgtggcagatggtacaagcagctttaaaaggagtagaataaatcttgttgatctagctggatcagagcgccaaaagttaactggtgcagctggggagcgcttgaaggaagcgggcaatatcaatcgatcactctcacaacttgggaatttgataaacatccttgctgaaatttctcagacaggaaagcaaaggcatatcccctatagagattccaggttgacattcttacttcaagagtctcttggggggaatgcaaagttagcaatggtttgtgctgtttctccaacacagagctgtaagagtgagactttcagtacattgagatttgctcagcgtgccaaggctatcaagaataaggcagttgttaatgaagtaatgcaggatgatgtgaatcacttgcgtgaagtgatacgacaattaagggatgaactacagcgaatcaaagcaaatgggaagaatgcagttgatgcaaatggaggtcattcggcggcgtggtttcgtcaaagcttgaatatactaaaggctagtcttaaccgtccaatgatgttatctcatattgatgatgacggtgatgaggagatggaaattgatgaggaagctgttgagaggctatgtgatgaagtggctaaccaatcagttggctgttatgcaagaaacctatctaatgtgagcaatgtagatacaagtaaatctcattccgaacttatgggtgttcaaattggaagctctgatgttcctcagacccgcacatctggaagtggttttgtcacagaacaaggttcagatgatacagatgttaagatggaagaagaaatatctgatgttcctcagaagcacacatttggaagtgcttgtatcacagaacaaggtcctgatgatacaaatgtcaaaatggaagaagcaatttctgaacaagaagagtccatgattgttgattctgttgctgacaccccaaatattacaagttcctccatctgcaatttgctaactgaagagtcagccagtaaaaaagtacacgatgactcctcgtgtgaagcatctgaatcagctagtgtagtatctgaatacctttcagttgcagatgagcccaataaatcacaaaatgtttcagtaaattgtgtttctccgagcctcatgatagttccatgtgatgtaaccccaatcctaaaatctcctactcccagtgtttcacctagggtgaacaccagcaggaaaagtttgaggacctcatcaatgatgacagcttctcagaaggatctttttgatggcagtcaattaagcccaaaggctgtggagaaacctgaaaaaatacgctcctctattgatccatcaactcagagatgtaagaatttttcagcaccagctgaacagttggcagcaagcattcgccatggccttgaaattattggtagtcagcgccatagttcagctttgaggagatcagcatttaggttttcactgaaaccttcagagtcgaggcagattttgccagttcccaaagttgatgctggtgtgcaaactgttgatgagttaccacaagaagattcagtggactatatttgtaataattgcaagaacagaatggagctagagggtaaagaggctaatgaactttctaaaatggaattagtacctgtggatgcatcagagcctgctgacaaatccaggatgcaggttccaaaagctgtagaaaaggtgttagccggagccatccgcagagaaatggcattagaagacatatgtgccaagaaaacttatgagataatgcagcttaaccgtttggtgcagcagtacaagcatgagagggaatgcaatgctattatatcccagacaagggaggataagattcttcgccttgagagccttatggatggtgttttacccactgaggagttcatggaggaagaactagtgtccctcacacatgattacaagcttttgaaggagaaatacgagaatcatccagagcttttgaggacaaagatcgagttaaaaaaagttcaagatgagctggaaaatttacgtaactttaatgatatgggtgaaagagaggtgttgttggaagagattcaagatttaagaagccagctacagtattatgtggactcctcatccacatcatcccgcacacgaaactctgtgctgcaattgacctattcctgtgagccaaagttggcccctcttagtacaattcaagagtcaaatgaggaaagcgttgagcagaaatttgaacaggagaggaaacagtggactgaggtagagagtacgtggatttctctttctgaggaattaagaactgaacttgaggctagcagatcactggttgaaaagacaaagcaggaattagaaacagagaagaaatgtgccgaagagctcaaggaagcaatgcaacgggcaatggaggggcagtcgcgaatgttggaacagtatgcagatttggaagagaaacatatggaacttcttataaggcataggaagatccgggatggagtggaagatgtaaagaaagcagctgctaaggctggagttaggggtgctgagtccaagtttataaattctctcgctgcagaaattacaacactgagattagaaagagaaagagaaaggagatatctgagggatgaaaataaggggcttcaggctcaattacaggatactgctgaagctgtacaggctgcgggtgaattgctgatacgactcaaagaagcagatgaggctgttgctattgctcagagacaagctacagaggcccagcaagaatcaaacaaggcttacatcaagattgaaaaattgaagaaaaaacatgaaaaggagataagcagtcttaatgagctccttgctcagcctcagttacccaaagaagcaatccgaccggcttatgatgaagattctcatattgcaaaatatgacgtaggtgaaccccatagtttgagtgatcagcggtggaaagaggaattcgagccattctacaatggggaagatggcgagttacgaaaacttgctgaaccctcatcatggttctctggttacgaccgatgcaacatatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000280 GO:0000910 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007112 GO:0007140 GO:0007275 GO:0007276 GO:0008150 GO:0008574 GO:0009524 GO:0009555 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033206 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048285 GO:0048609 GO:0048856 GO:0051301 GO:0051321 GO:0051704 GO:0055046 GO:0061640 GO:0071840 GO:0080175 GO:0140013 GO:1903046 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1048

Amino Acids

117.64

Weight (kDa)

5.21

Isoelectric Point (pI)

57.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010348)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23670 AT3G23670 AT4G14150
fragaria_vesca	FvH4_4g12770 FvH4_4g12770
malus_domestica	MD04G1023400.v1.1 MD13G1280700.v1.1
prunus_persica	Prupe.1G173100_v2.0.a1
pyrus_communis	pycom04g01990 pycom13g29270
rosa_chinensis	RchiOBHm_Chr4g0412101
rosa_laevigata	RLG00000008323
rosa_multiflora	Rmu_co8521685.1_g000001 Rmu_sc0004447.1_g000004
rosa_roxburghii	Rroxscaffold_5G00356370
rosa_rugosa	Rorug04G0106600
rosa_samantha	Rh4AG171300 Rh4BG170100 Rh4CG182200 Rh4DG165600
rosa_wichuraiana	Rw4G014280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2564, 2651
Acc36I	ACCTGC	1 cut(s)	1762
AccII	CGCG	1 cut(s)	2512
AciI	CCGC	8 cut(s)	41, 209, 587, 844, 1813, 2224, 2777, 3040
AclWI	GGATC	4 cut(s)	166, 1362, 1418, 2572
AcsI	RAATTY	7 cut(s)	244, 267, 1447, 2116, 2324, 2653, 3053
AcuI	CTGAAG	4 cut(s)	1110, 1551, 2720, 2781
AfaI	GTAC	8 cut(s)	112, 415, 1113, 1731, 1892, 2287, 2365, 2769
AfeI	AGCGCT	1 cut(s)	197
AfiI	CCNNNNNNNGG	3 cut(s)	1932, 1933, 3114
AhlI	ACTAGT	2 cut(s)	29, 2008
AjnI	CCWGG	2 cut(s)	311, 1763
AleI	CACNNNNGTG	1 cut(s)	498
AloI	GAACNNNNNNTCC	2 cut(s)	7, 39
Alw21I	GWGCWC	2 cut(s)	2475, 2934
Alw26I	GTCTC	3 cut(s)	342, 398, 2827
AlwI	GGATC	4 cut(s)	166, 1362, 1418, 2572
AlwNI	CAGNNNCTG	1 cut(s)	1751
Aor51HI	AGCGCT	1 cut(s)	197
AoxI	GGCC	3 cut(s)	1492, 2274, 2847
ApoI	RAATTY	7 cut(s)	244, 267, 1447, 2116, 2324, 2653, 3053
Asp700I	GAANNNNTTC	1 cut(s)	2166
AspA2I	CCTAGG	1 cut(s)	1292
AspLEI	GCGC	3 cut(s)	168, 198, 1518
AspS9I	GGNCC	4 cut(s)	968, 1323, 2275, 2848
AsuC2I	CCSGG	1 cut(s)	2582
AsuHPI	GGTGA	6 cut(s)	680, 1281, 1309, 2153, 2792, 3026
AsuNHI	GCTAGC	1 cut(s)	2408
AvaII	GGWCC	2 cut(s)	968, 1323
AvrII	CCTAGG	1 cut(s)	1292
BaeI	ACNNNNGTAYC	6 cut(s)	82, 115, 879, 912, 969, 1002
BanII	GRGCYC	3 cut(s)	1188, 2475, 2934
BarI	GAAGNNNNNNTAC	2 cut(s)	2033, 2065
BauI	CACGAG	1 cut(s)	1126
BbsI	GAAGAC	1 cut(s)	1839
Bbv12I	GWGCWC	2 cut(s)	2475, 2934
BciT130I	CCWGG	2 cut(s)	313, 1765
BciVI	GTATCC	1 cut(s)	2746
BclI	TGATCA	1 cut(s)	3034
BcnI	CCSGG	1 cut(s)	2582
BcoDI	GTCTC	3 cut(s)	342, 398, 2827
BcuI	ACTAGT	2 cut(s)	29, 2008
BfaI	CTAG	8 cut(s)	30, 152, 624, 1149, 1293, 1688, 2009, 2409
BfmI	CTRYAG	6 cut(s)	301, 530, 1785, 2189, 2664, 2841
BfoI	RGCGCY	3 cut(s)	169, 199, 1519
BfuAI	ACCTGC	1 cut(s)	1762
BfuI	GTATCC	1 cut(s)	2746
BlnI	CCTAGG	1 cut(s)	1292
BlpI	GCTNAGC	2 cut(s)	429, 2940
Bme1390I	CCNGG	3 cut(s)	313, 1765, 2582
Bme18I	GGWCC	2 cut(s)	968, 1323
BmgT120I	GGNCC	4 cut(s)	968, 1323, 2275, 2848
BmiI	GGNNCC	3 cut(s)	1776, 1807, 2277
BmrFI	CCNGG	3 cut(s)	313, 1765, 2582
BmrI	ACTGGG	1 cut(s)	1275
BmsI	GCATC	7 cut(s)	556, 1145, 1594, 1729, 1751, 1758, 3125
BmtI	GCTAGC	1 cut(s)	2412
BmuI	ACTGGG	1 cut(s)	1275
BpiI	GAAGAC	1 cut(s)	1839
BplI	GAGNNNNNCTC	2 cut(s)	412, 444
BpmI	CTGGAG	1 cut(s)	2643
Bpu10I	CCTNAGC	1 cut(s)	2616
Bpu1102I	GCTNAGC	2 cut(s)	429, 2940
BpuEI	CTTGAG	3 cut(s)	1976, 2423, 2459
BpuMI	CCSGG	1 cut(s)	2582
Bsa29I	ATCGAT	1 cut(s)	223
BsaAI	YACGTR	2 cut(s)	2123, 2367
BsaBI	GATNNNNATC	2 cut(s)	254, 489
BsaJI	CCNNGG	3 cut(s)	438, 1292, 1489
BsaXI	ACNNNNNCTCC	6 cut(s)	7, 37, 1106, 1136, 2492, 2522
Bsc4I	CCNNNNNNNGG	3 cut(s)	1932, 1933, 3114
Bse118I	RCCGGY	1 cut(s)	2971
Bse1I	ACTGG	6 cut(s)	25, 184, 1101, 1281, 1589, 2424
Bse3DI	GCAATG	5 cut(s)	369, 778, 1918, 2490, 2502
Bse8I	GATNNNNATC	2 cut(s)	254, 489
BseBI	CCWGG	2 cut(s)	313, 1765
BseCI	ATCGAT	1 cut(s)	223
BseDI	CCNNGG	3 cut(s)	438, 1292, 1489
BseJI	GATNNNNATC	2 cut(s)	254, 489
BseLI	CCNNNNNNNGG	3 cut(s)	1932, 1933, 3114
BseMI	GCAATG	5 cut(s)	369, 778, 1918, 2490, 2502
BseNI	ACTGG	6 cut(s)	25, 184, 1101, 1281, 1589, 2424
BseRI	GAGGAG	6 cut(s)	689, 1114, 1405, 1549, 2003, 2197
BseYI	CCCAGC	2 cut(s)	188, 2850
BsgI	GTGCAG	2 cut(s)	204, 1904
Bsh1236I	CGCG	1 cut(s)	2512
Bsh1285I	CGRYCG	2 cut(s)	2972, 3133
BshFI	GGCC	3 cut(s)	1494, 2276, 2849
BshVI	ATCGAT	1 cut(s)	223
BsiEI	CGRYCG	2 cut(s)	2972, 3133
BsiHKAI	GWGCWC	2 cut(s)	2475, 2934
BsiSI	CCGG	3 cut(s)	1803, 2581, 2972
BslFI	GGGAC	1 cut(s)	1999
BslI	CCNNNNNNNGG	3 cut(s)	1932, 1933, 3114
BsmAI	GTCTC	3 cut(s)	342, 398, 2827
BsmFI	GGGAC	1 cut(s)	1999
BsmI	GAATGC	4 cut(s)	355, 562, 1482, 1913
BsnI	GGCC	3 cut(s)	1494, 2276, 2849
Bsp1286I	GDGCHC	3 cut(s)	1188, 2475, 2934
Bsp1407I	TGTACA	1 cut(s)	2767
Bsp1720I	GCTNAGC	2 cut(s)	429, 2940
Bsp19I	CCATGG	1 cut(s)	1489
Bsp68I	TCGCGA	1 cut(s)	2512
BspACI	CCGC	8 cut(s)	41, 209, 587, 844, 1813, 2224, 2777, 3040
BspANI	GGCC	3 cut(s)	1494, 2276, 2849
BspDI	ATCGAT	1 cut(s)	223
BspFNI	CGCG	1 cut(s)	2512
BspHI	TCATGA	1 cut(s)	1233
BspLI	GGNNCC	3 cut(s)	1776, 1807, 2277
BspMAI	CTGCAG	1 cut(s)	2668
BspMI	ACCTGC	1 cut(s)	1762
BspOI	GCTAGC	1 cut(s)	2412
BspPI	GGATC	4 cut(s)	166, 1362, 1418, 2572
BspQI	GCTCTTC	1 cut(s)	2463
BsrDI	GCAATG	5 cut(s)	369, 778, 1918, 2490, 2502
BsrFI	RCCGGY	1 cut(s)	2971
BsrGI	TGTACA	1 cut(s)	2767
BsrI	ACTGG	6 cut(s)	25, 184, 1101, 1281, 1589, 2424
BssAI	RCCGGY	1 cut(s)	2971
BssECI	CCNNGG	3 cut(s)	438, 1292, 1489
BssSI	CACGAG	1 cut(s)	1126
BssT1I	CCWWGG	3 cut(s)	438, 1292, 1489
Bst2BI	CACGAG	1 cut(s)	1126
Bst2UI	CCWGG	2 cut(s)	313, 1765
Bst6I	CTCTTC	5 cut(s)	1011, 1086, 2157, 2463, 2535
BstAPI	GCANNNNNTGC	2 cut(s)	566, 1585
BstAUI	TGTACA	1 cut(s)	2767
BstBAI	YACGTR	2 cut(s)	2123, 2367
BstC8I	GCNNGC	6 cut(s)	211, 435, 1480, 1752, 2186, 2410
BstDSI	CCRYGG	1 cut(s)	1489
BstFNI	CGCG	1 cut(s)	2512
BstH2I	RGCGCY	3 cut(s)	169, 199, 1519
BstHHI	GCGC	3 cut(s)	168, 198, 1518
BstMAI	GTCTC	3 cut(s)	342, 398, 2827
BstMCI	CGRYCG	2 cut(s)	2972, 3133
BstNI	CCWGG	2 cut(s)	313, 1765
BstSCI	CCNGG	3 cut(s)	311, 1763, 2580
BstSFI	CTRYAG	6 cut(s)	301, 530, 1785, 2189, 2664, 2841
BstSNI	TACGTA	1 cut(s)	2123
BstUI	CGCG	1 cut(s)	2512
BstV2I	GAAGAC	1 cut(s)	1839
BstX2I	RGATCY	2 cut(s)	1354, 2577
BstXI	CCANNNNNNTGG	1 cut(s)	737
BstYI	RGATCY	2 cut(s)	1354, 2577
Bsu15I	ATCGAT	1 cut(s)	223
BsuI	GTATCC	1 cut(s)	2746
BsuRI	GGCC	3 cut(s)	1494, 2276, 2849
BsuTUI	ATCGAT	1 cut(s)	223
BtgI	CCRYGG	1 cut(s)	1489
BtsIMutI	CAGTG	7 cut(s)	1288, 1556, 1653, 1983, 2351, 2417, 2678
BtuMI	TCGCGA	1 cut(s)	2512
BveI	ACCTGC	1 cut(s)	1762
Cac8I	GCNNGC	6 cut(s)	211, 435, 1480, 1752, 2186, 2410
CaiI	CAGNNNCTG	1 cut(s)	1751
CciI	TCATGA	1 cut(s)	1233
CfoI	GCGC	3 cut(s)	168, 198, 1518
Cfr10I	RCCGGY	1 cut(s)	2971
Cfr13I	GGNCC	4 cut(s)	968, 1323, 2275, 2848
ClaI	ATCGAT	1 cut(s)	223
Csp6I	GTAC	8 cut(s)	111, 414, 1112, 1730, 1891, 2286, 2364, 2768
CspCI	CAANNNNNGTGG	2 cut(s)	1371, 1406
CviAII	CATG	9 cut(s)	1024, 1234, 1245, 1490, 1898, 1996, 2024, 2903, 3114
CviQI	GTAC	8 cut(s)	111, 414, 1112, 1730, 1891, 2286, 2364, 2768
DraI	TTTAAA	1 cut(s)	124
Eam1104I	CTCTTC	5 cut(s)	1011, 1086, 2157, 2463, 2535
EarI	CTCTTC	5 cut(s)	1011, 1086, 2157, 2463, 2535
Ecl136II	GAGCTC	2 cut(s)	2473, 2932
Eco105I	TACGTA	1 cut(s)	2123
Eco130I	CCWWGG	3 cut(s)	438, 1292, 1489
Eco24I	GRGCYC	3 cut(s)	1188, 2475, 2934
Eco32I	GATATC	1 cut(s)	2711
Eco47I	GGWCC	2 cut(s)	968, 1323
Eco47III	AGCGCT	1 cut(s)	197
Eco53kI	GAGCTC	2 cut(s)	2473, 2932
Eco57I	CTGAAG	4 cut(s)	1110, 1551, 2720, 2781
EcoICRI	GAGCTC	2 cut(s)	2473, 2932
EcoO109I	RGGNCCY	2 cut(s)	968, 1323
EcoRI	GAATTC	1 cut(s)	3053
EcoRII	CCWGG	2 cut(s)	311, 1763
EcoRV	GATATC	1 cut(s)	2711
EcoT14I	CCWWGG	3 cut(s)	438, 1292, 1489
EcoT22I	ATGCAT	1 cut(s)	1744
EcoT38I	GRGCYC	3 cut(s)	1188, 2475, 2934
ErhI	CCWWGG	3 cut(s)	438, 1292, 1489
FaeI	CATG	9 cut(s)	1027, 1237, 1248, 1493, 1901, 1999, 2027, 2906, 3117
FalI	AAGNNNNNCTT	2 cut(s)	324, 356
FaqI	GGGAC	1 cut(s)	1999
FatI	CATG	9 cut(s)	1023, 1233, 1244, 1489, 1897, 1995, 2023, 2902, 3113
FauI	CCCGC	4 cut(s)	202, 851, 2231, 2770
FauNDI	CATATG	2 cut(s)	1838, 2550
FbaI	TGATCA	1 cut(s)	3034
FriOI	GRGCYC	3 cut(s)	1188, 2475, 2934
FspBI	CTAG	8 cut(s)	30, 152, 624, 1149, 1293, 1688, 2009, 2409
GlaI	GCGC	3 cut(s)	167, 197, 1517
GsaI	CCCAGC	2 cut(s)	192, 2854
GsuI	CTGGAG	1 cut(s)	2643
HaeII	RGCGCY	3 cut(s)	169, 199, 1519
HaeIII	GGCC	3 cut(s)	1494, 2276, 2849
HapII	CCGG	3 cut(s)	1803, 2581, 2972
HhaI	GCGC	3 cut(s)	168, 198, 1518
Hin1II	CATG	9 cut(s)	1027, 1237, 1248, 1493, 1901, 1999, 2027, 2906, 3117
Hin6I	GCGC	3 cut(s)	166, 196, 1516
HinP1I	GCGC	3 cut(s)	166, 196, 1516
HincII	GTYRAC	2 cut(s)	177, 318
HindII	GTYRAC	2 cut(s)	177, 318
HindIII	AAGCTT	2 cut(s)	604, 2033
HpaI	GTTAAC	1 cut(s)	177
HpaII	CCGG	3 cut(s)	1803, 2581, 2972
HphI	GGTGA	6 cut(s)	680, 1281, 1309, 2153, 2792, 3026
Hpy166II	GTNNAC	8 cut(s)	177, 318, 1114, 1300, 1651, 2203, 2349, 3017
Hpy8I	GTNNAC	8 cut(s)	177, 318, 1114, 1300, 1651, 2203, 2349, 3017
HpyAV	CCTTC	4 cut(s)	196, 1345, 1575, 2035
HpyCH4IV	ACGT	3 cut(s)	2122, 2366, 3009
HpySE526I	ACGT	3 cut(s)	2122, 2366, 3009
Hsp92II	CATG	9 cut(s)	1027, 1237, 1248, 1493, 1901, 1999, 2027, 2906, 3117
HspAI	GCGC	3 cut(s)	166, 196, 1516
Ksp22I	TGATCA	1 cut(s)	3034
KspAI	GTTAAC	1 cut(s)	177
LguI	GCTCTTC	1 cut(s)	2463
LmnI	GCTCC	5 cut(s)	193, 1418, 1684, 1805, 2937
LweI	GCATC	7 cut(s)	556, 1145, 1594, 1729, 1751, 1758, 3125
MaeI	CTAG	8 cut(s)	30, 152, 624, 1149, 1293, 1688, 2009, 2409
MaeII	ACGT	3 cut(s)	2122, 2366, 3009
MaeIII	GTNAC	7 cut(s)	865, 1252, 1629, 2123, 2949, 3087, 3125
MfeI	CAATTG	1 cut(s)	2246
MflI	RGATCY	2 cut(s)	1354, 2577
MhlI	GDGCHC	3 cut(s)	1188, 2475, 2934
MlyI	GAGTC	9 cut(s)	344, 1028, 1103, 1115, 1580, 2198, 2306, 2648, 2790
MmeI	TCCRAC	4 cut(s)	407, 2139, 2499, 2992
Mph1103I	ATGCAT	1 cut(s)	1744
MroXI	GAANNNNTTC	1 cut(s)	2166
MslI	CAYNNNNRTG	2 cut(s)	498, 657
MspA1I	CMGCKG	4 cut(s)	188, 1463, 2612, 3040
MspI	CCGG	3 cut(s)	1803, 2581, 2972
MspR9I	CCNGG	3 cut(s)	313, 1765, 2582
MunI	CAATTG	1 cut(s)	2246
Mva1269I	GAATGC	4 cut(s)	355, 562, 1482, 1913
MvaI	CCWGG	2 cut(s)	313, 1765
MvnI	CGCG	1 cut(s)	2512
NciI	CCSGG	1 cut(s)	2582
NcoI	CCATGG	1 cut(s)	1489
NdeI	CATATG	2 cut(s)	1838, 2550
NheI	GCTAGC	1 cut(s)	2408
NlaIII	CATG	9 cut(s)	1027, 1237, 1248, 1493, 1901, 1999, 2027, 2906, 3117
NlaIV	GGNNCC	3 cut(s)	1776, 1807, 2277
NmuCI	GTSAC	1 cut(s)	865
NruI	TCGCGA	1 cut(s)	2512
NsiI	ATGCAT	1 cut(s)	1744
OliI	CACNNNNGTG	1 cut(s)	498
PagI	TCATGA	1 cut(s)	1233
PciSI	GCTCTTC	1 cut(s)	2463
PctI	GAATGC	4 cut(s)	355, 562, 1482, 1913
PdmI	GAANNNNTTC	1 cut(s)	2166
PfoI	TCCNGGA	2 cut(s)	1763, 2580
PleI	GAGTC	9 cut(s)	343, 1027, 1102, 1115, 1579, 2198, 2305, 2647, 2790
PpsI	GAGTC	9 cut(s)	343, 1027, 1102, 1115, 1579, 2198, 2305, 2647, 2790
Ppu21I	YACGTR	2 cut(s)	2123, 2367
PpuMI	RGGWCCY	2 cut(s)	968, 1323
PsiI	TTATAA	2 cut(s)	2564, 2651
Psp124BI	GAGCTC	2 cut(s)	2475, 2934
Psp5II	RGGWCCY	2 cut(s)	968, 1323
Psp6I	CCWGG	2 cut(s)	311, 1763
PspFI	CCCAGC	2 cut(s)	188, 2850
PspGI	CCWGG	2 cut(s)	311, 1763
PspN4I	GGNNCC	3 cut(s)	1776, 1807, 2277
PspPI	GGNCC	4 cut(s)	968, 1323, 2275, 2848
PspPPI	RGGWCCY	2 cut(s)	968, 1323
PstI	CTGCAG	1 cut(s)	2668
PstNI	CAGNNNCTG	1 cut(s)	1751
PsuI	RGATCY	2 cut(s)	1354, 2577
PvuII	CAGCTG	3 cut(s)	188, 1463, 2612
RruI	TCGCGA	1 cut(s)	2512
RsaI	GTAC	8 cut(s)	112, 415, 1113, 1731, 1892, 2287, 2365, 2769
RsaNI	GTAC	8 cut(s)	111, 414, 1112, 1730, 1891, 2286, 2364, 2768
RseI	CAYNNNNRTG	2 cut(s)	498, 657
SacI	GAGCTC	2 cut(s)	2475, 2934
SapI	GCTCTTC	1 cut(s)	2463
Sau96I	GGNCC	4 cut(s)	968, 1323, 2275, 2848
SchI	GAGTC	9 cut(s)	344, 1028, 1103, 1115, 1580, 2198, 2306, 2648, 2790
ScrFI	CCNGG	3 cut(s)	313, 1765, 2582
SduI	GDGCHC	3 cut(s)	1188, 2475, 2934
SfaNI	GCATC	7 cut(s)	556, 1145, 1594, 1729, 1751, 1758, 3125
SfcI	CTRYAG	6 cut(s)	301, 530, 1785, 2189, 2664, 2841
SinI	GGWCC	2 cut(s)	968, 1323
SmiMI	CAYNNNNRTG	2 cut(s)	498, 657
SmlI	CTYRAG	3 cut(s)	1955, 2402, 2474
SmoI	CTYRAG	3 cut(s)	1955, 2402, 2474
SnaBI	TACGTA	1 cut(s)	2123
SpeI	ACTAGT	2 cut(s)	29, 2008
SsiI	CCGC	8 cut(s)	41, 209, 587, 844, 1813, 2224, 2777, 3040
SspI	AATATT	1 cut(s)	1057
SspMI	CTAG	8 cut(s)	30, 152, 624, 1149, 1293, 1688, 2009, 2409
SstI	GAGCTC	2 cut(s)	2475, 2934
StyD4I	CCNGG	3 cut(s)	311, 1763, 2580
StyI	CCWWGG	3 cut(s)	438, 1292, 1489
TaiI	ACGT	3 cut(s)	2125, 2369, 3012
TaqI	TCGA	5 cut(s)	88, 223, 1574, 2085, 3057
TaqII	GACCGA	1 cut(s)	3147
TatI	WGTACW	5 cut(s)	413, 1111, 1890, 2285, 2767
TauI	GCSGC	1 cut(s)	590
TscAI	CASTG	7 cut(s)	1288, 1563, 1653, 1990, 2351, 2424, 2685
TseFI	GTSAC	1 cut(s)	865
Tsp45I	GTSAC	1 cut(s)	865
TspDTI	ATGAA	8 cut(s)	483, 540, 732, 1722, 1984, 2736, 2919, 2997
TspRI	CASTG	7 cut(s)	1288, 1563, 1653, 1990, 2351, 2424, 2685
VpaK11BI	GGWCC	2 cut(s)	968, 1323
XapI	RAATTY	7 cut(s)	244, 267, 1447, 2116, 2324, 2653, 3053
XcmI	CCANNNNNNNNNTGG	1 cut(s)	176
XmaJI	CCTAGG	1 cut(s)	1292
XmnI	GAANNNNTTC	1 cut(s)	2166
XspI	CTAG	8 cut(s)	30, 152, 624, 1149, 1293, 1688, 2009, 2409
Zsp2I	ATGCAT	1 cut(s)	1744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.