Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0010348

Physical Location & Seq

Genomic Coordinates Reverse (-)

39364352 .. 39375359

Gene Structure 11008 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG182200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2886 bp

ATGAAGTCTATGCAGCCGCGCCACAACTTCTTACGGGAGACGACGGAGCCTCCCCAGTCGCCAAACCCTAGCTCCGGCAAGCCTAGGGTCCCGCGGAAGCATAAAGCCTCGAAGGAGAACGCGCCTCCGTCTTCAGATCTCAACTATACGGCCTTCGATTCGAAGCCTTCGCCCGCGGCCAAGTTGAAGAGTCCGCTGCCGCCGCGGCCGCCGCCGTCAAATCCTCTCAAAAGGAAGCTCGAGATGCTCCCTGAGAACTCCGTCCATGGAGCCTCTGATTCCGGCGTCCAGGTAATCGTGAGAATGCGGCCGCCACGAAAGGACAGGGATGAAGGAGAGATGATGGTGCAGAAAACTGCTGGTGATTCTTTGTCGATAAATGGACAAACCTTCACATTTGACTCGGTGGCCGACACAGATGCATCACAGCTAGATATTTTCCAGCTTGTAGGAGTACCACTGGTTGAAAATTGTATGGCTGGGTTCAACAGTTCTGTGTTTGCATACGGACAGACTGGAAGTGGAAAGACATACACTATGTGGGGTCCTGCAAATGCGTTGTTGGATGAAAATTTATCAAGTGATCAACAAGGCTTAACTCCCCGTGTTCTCGAGCGTCTTTTTGCTCGCATAAATGAGGAGCAAATCAAGCATGCTGACAAACAACTCAAGTATCAGTGCCAATGTTCTTTTCTAGAGATTTACAACGAACAAATCACAGATCTGTTGGATCCAAATCCAAAAAGTCTTCAGATAAGAGAAGATGTTAAATCAGGTGTCTATGTGGAAAATCTCACAGAGGAATGTGTACGCACAATCAAAGATGTGACTCAGCTTTTGATAAAGGGGTTGTCAAACAGGAGGACTGGTTCAACTAGTATCAATGCGGACAGTTCTCGCTCACATACTGTTTTTACCTGTGTTGTTGAATCTCGATACAAGAGTGTGGCAGATGGTACAAGCAGCTTTAAAAGGAGTAGAATAAATCTTGTTGATCTAGCTGGATCAGAGCGCCAAAAGTTAACTGGTGCAGCTGGGGAGCGCTTGAAGGAAGCGGGCAATATCAATCGATCACTCTCACAACTTGGGAATTTGATAAACATCCTTGCTGAAATTTCTCAGACAGGAAAGCAAAGGCATATCCCCTATAGAGATTCCAGGTTGACATTCTTACTTCAGGAGTCTCTTGGGGGGAATGCAAAGTTAGCAATGGTTTGTGCTGTTTCTCCTACACAGAGCTGTAAGAGTGAGACTTTCAGTACATTGAGATTTGCTCAGCGTGCCAAGGCTATCAAGAATAAGGCAGTTGTTAATGAAGTAATGCAGGATGATGTGAATCACTTGCGTGAAGTGATACGACAATTAAGGGATGAACTACAGCGAATCAAAGCAAATGGGAAGAATGCAGTTGATGCAAATGGAGGTCATTCGGCGGCGTGGTTTCGTCAAAGCTTGAATATACTAAAGGCTAGTCTTAACCGTCCAATGATGTCATCTCATATTGATGATGACGGTGATGAGGAGATGGAAATTGATGAGGAAGCTGTTGAGAGGCTATGTGATGAAGTGGCTAACCAATCAGTTGGCTGTTATGCAAGAAACCTATCTAATGTGAGCAATGTAGATACAAGTAAATCTCATTCCGAACTTATGGGTGTTCAAATTGGAAGCTCTGATGTTCCTCAGACCCGCACATCTGGAAGTGGTTTTGTCACAGAACAAGGTTCAGATGATACAGATGTTAAGATGGAAGAAGAAATATCTGATGTTCCTCAGAAGCACACATTTGGAAGTGCTTGTATCACAGAACAAGGTCCTGATGATACAAATGTCAAAATGGAAGAAGCAATTTCTGAACAAGAAGAGTCCATGATTGTTGATTCTGTTGCTGACACCCCAGATATTACAAGTTCCTCCATCTGCAATTTGCTAACTGAAGAGTCAGCCAGTAAAAAAGTACACGATGACTCCTCGTGTGAAGCATCTGAACAGGCTAGTGTAGTATCTGAATACCTTTCAGTTGCAGATGAGCCCAATAAATCACAAAATGTTTCAGTAAATTGTGTTTCTCCGAGCCTCATGATAGTTCCATGTGATGTAACCCCAATCCTAAAATCTCCTACTCCCAGTGTTTCACCTAGGGTGAACACCAGCAGGAAAAGTTTGAGGACCTCATCAATGATGACAGCTTCTCAGAAGGATCTTTTTGATGGCAGTCAATTAAGCCCAAAGGCTGTGGAGAAACCTGAAAAAATACGCTCCTCTATTGATCCATCAACTCAGACATGTAAGAATTTTTCAGCACCAGCTGAACAGTTGGCAGCAAGCATTCGCCATGGCCTTGAAATTATTGGTAGTCAGCGCCATAGTTCAGCTTTGAGGAGATCAGCATTCAGGTTTTCACTGAAACCTTCAGAGTCGAGGCAGATTTTGCCAGTTCCCAAAGTTGATGCTGGTGTGCAAACTGTTGATGAGTTACCACAAGAAGATTCAGTGGACTATATTTGTAATAATTGCAAGAACAGAATGGAGCTAGAGGGTAAAGAGGCTAATGAACTTTCTAAAATGGAATTAGTACCTGTGGATGCATCAGAGCCTGCTGACAAATCCAGGATGCAGGTTCCAAAAGCTGTAGAAAAGGTGTTAGCCGGAGCCATCCGCAGAGAAATGGCATTAGAAGACATATGTGCCAAGAAAACTTCTGAGATAATGCAGCTTAACCGTTTGGTGCAGCAGTACAAGCATGAGAGGGAATGCAATGCTATTATATCCCAGACAAGGGAGGATAAGATTCTTCGCCTTGAGAGCCTTATGGATGGTGTTTTACCCACTGAGGAGTTCATGGAGGAAGAACTAGTGTCCCTCACACATGATTACAAGGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000280 GO:0000910 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007112 GO:0007140 GO:0007275 GO:0007276 GO:0008150 GO:0008574 GO:0009524 GO:0009555 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033206 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048285 GO:0048609 GO:0048856 GO:0051301 GO:0051321 GO:0051704 GO:0055046 GO:0061640 GO:0071840 GO:0080175 GO:0140013 GO:1903046 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

961

Amino Acids

105.99

Weight (kDa)

5.48

Isoelectric Point (pI)

52.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	96 - 243	3.4e-21	Microtubule binding
Kinesin	PF00225	122 - 431	9.6e-107	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010348)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23670 AT3G23670 AT4G14150
fragaria_vesca	FvH4_4g12770 FvH4_4g12770
malus_domestica	MD04G1023400.v1.1 MD13G1280700.v1.1
prunus_persica	Prupe.1G173100_v2.0.a1
pyrus_communis	pycom04g01990 pycom13g29270
rosa_chinensis	RchiOBHm_Chr4g0412101
rosa_laevigata	RLG00000008323
rosa_multiflora	Rmu_co8521685.1_g000001 Rmu_sc0004447.1_g000004
rosa_roxburghii	Rroxscaffold_5G00356370
rosa_rugosa	Rorug04G0106600
rosa_samantha	Rh4AG171300 Rh4BG170100 Rh4CG182200 Rh4DG165600
rosa_wichuraiana	Rw4G014280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2608
AccII	CGCG	5 cut(s)	19, 94, 122, 176, 205
AclWI	GGATC	5 cut(s)	725, 738, 1012, 2208, 2264
AcoI	YGGCCR	4 cut(s)	177, 206, 308, 408
AcsI	RAATTY	4 cut(s)	571, 1090, 1113, 2293
AcuI	CTGAAG	5 cut(s)	117, 734, 1160, 1956, 2397
AcyI	GRCGYC	1 cut(s)	285
AdeI	CACNNNGTG	1 cut(s)	540
AfaI	GTAC	7 cut(s)	456, 810, 958, 1261, 1959, 2577, 2738
AfeI	AGCGCT	1 cut(s)	1043
AfiI	CCNNNNNNNGG	3 cut(s)	74, 2778, 2779
AflIII	ACRYGT	1 cut(s)	2285
AgsI	TTSAA	9 cut(s)	187, 467, 487, 873, 929, 1048, 1456, 1661, 2345
AhlI	ACTAGT	2 cut(s)	875, 2854
AjnI	CCWGG	3 cut(s)	288, 1157, 2609
AjuI	GAANNNNNNNTTGG	2 cut(s)	675, 707
AleI	CACNNNNGTG	1 cut(s)	1344
AloI	GAACNNNNNNTCC	2 cut(s)	853, 885
Alw26I	GTCTC	3 cut(s)	32, 1188, 1244
AlwI	GGATC	5 cut(s)	725, 738, 1012, 2208, 2264
AlwNI	CAGNNNCTG	1 cut(s)	2597
Ama87I	CYCGRG	2 cut(s)	239, 611
Aor51HI	AGCGCT	1 cut(s)	1043
AoxI	GGCC	6 cut(s)	150, 177, 206, 308, 408, 2338
ApeKI	GCWGC	7 cut(s)	13, 196, 963, 1031, 2321, 2713, 2731
ApoI	RAATTY	4 cut(s)	571, 1090, 1113, 2293
ArsI	GACNNNNNNTTYG	2 cut(s)	820, 852
AspA2I	CCTAGG	2 cut(s)	83, 2138
AspLEI	GCGC	5 cut(s)	21, 124, 1014, 1044, 2364
AspS9I	GGNCC	4 cut(s)	88, 545, 1814, 2169
AsuHPI	GGTGA	4 cut(s)	374, 1526, 2127, 2155
AsuII	TTCGAA	1 cut(s)	161
AvaI	CYCGRG	2 cut(s)	239, 611
AvaII	GGWCC	4 cut(s)	88, 545, 1814, 2169
AvrII	CCTAGG	2 cut(s)	83, 2138
BaeI	ACNNNNGTAYC	8 cut(s)	656, 689, 928, 961, 1725, 1758, 1815, 1848
BamHI	GGATCC	1 cut(s)	730
BanII	GRGCYC	1 cut(s)	2034
BauI	CACGAG	1 cut(s)	1972
BbsI	GAAGAC	3 cut(s)	123, 740, 2685
BbvI	GCAGC	7 cut(s)	25, 183, 975, 1043, 2333, 2725, 2743
BccI	CCATC	9 cut(s)	337, 947, 1519, 1741, 1925, 2204, 2281, 2663, 2810
BceAI	ACGGC	2 cut(s)	165, 199
BcgI	CGANNNNNNTGC	2 cut(s)	401, 435
BciT130I	CCWGG	3 cut(s)	290, 1159, 2611
BclI	TGATCA	1 cut(s)	583
BcoDI	GTCTC	3 cut(s)	32, 1188, 1244
BcuI	ACTAGT	2 cut(s)	875, 2854
BfmI	CTRYAG	3 cut(s)	1147, 1376, 2631
BfoI	RGCGCY	3 cut(s)	1015, 1045, 2365
BfuAI	ACCTGC	1 cut(s)	2608
BglI	GCCNNNNNGGC	1 cut(s)	205
BglII	AGATCT	2 cut(s)	136, 721
BlnI	CCTAGG	2 cut(s)	83, 2138
BlpI	GCTNAGC	1 cut(s)	1275
Bme1390I	CCNGG	3 cut(s)	290, 1159, 2611
Bme18I	GGWCC	4 cut(s)	88, 545, 1814, 2169
BmeT110I	CYCGRG	2 cut(s)	239, 611
BmgT120I	GGNCC	4 cut(s)	88, 545, 1814, 2169
BmiI	GGNNCC	8 cut(s)	48, 89, 90, 271, 546, 732, 2622, 2653
BmrFI	CCNGG	3 cut(s)	290, 1159, 2611
BmrI	ACTGGG	2 cut(s)	49, 2121
BmsI	GCATC	9 cut(s)	234, 409, 431, 1402, 1991, 2440, 2575, 2597, 2604
BmuI	ACTGGG	2 cut(s)	49, 2121
BpiI	GAAGAC	3 cut(s)	123, 740, 2685
BplI	GAGNNNNNCTC	2 cut(s)	1258, 1290
Bpu1102I	GCTNAGC	1 cut(s)	1275
Bpu14I	TTCGAA	1 cut(s)	161
BpuEI	CTTGAG	2 cut(s)	653, 2822
Bsa29I	ATCGAT	1 cut(s)	1069
BsaBI	GATNNNNATC	3 cut(s)	735, 1100, 1335
BsaHI	GRCGYC	1 cut(s)	285
BsaJI	CCNNGG	8 cut(s)	83, 92, 174, 203, 265, 1284, 2138, 2335
BsaXI	ACNNNNNCTCC	8 cut(s)	34, 56, 64, 86, 853, 883, 1952, 1982
Bsc4I	CCNNNNNNNGG	3 cut(s)	74, 2778, 2779
Bse1I	ACTGG	8 cut(s)	55, 465, 520, 871, 1030, 1947, 2127, 2435
Bse3DI	GCAATG	3 cut(s)	1215, 1624, 2764
Bse8I	GATNNNNATC	3 cut(s)	735, 1100, 1335
BseBI	CCWGG	3 cut(s)	290, 1159, 2611
BseCI	ATCGAT	1 cut(s)	1069
BseDI	CCNNGG	8 cut(s)	83, 92, 174, 203, 265, 1284, 2138, 2335
BseGI	GGATG	9 cut(s)	334, 571, 1101, 1333, 1375, 2590, 2619, 2655, 2821
BseJI	GATNNNNATC	3 cut(s)	735, 1100, 1335
BseLI	CCNNNNNNNGG	3 cut(s)	74, 2778, 2779
BseMI	GCAATG	3 cut(s)	1215, 1624, 2764
BseNI	ACTGG	8 cut(s)	55, 465, 520, 871, 1030, 1947, 2127, 2435
BseRI	GAGGAG	6 cut(s)	653, 1535, 1960, 2251, 2395, 2849
BseX3I	CGGCCG	2 cut(s)	206, 308
BseXI	GCAGC	7 cut(s)	25, 183, 975, 1043, 2333, 2725, 2743
BseYI	CCCAGC	2 cut(s)	479, 1034
BsgI	GTGCAG	3 cut(s)	368, 1050, 2750
Bsh1236I	CGCG	5 cut(s)	19, 94, 122, 176, 205
Bsh1285I	CGRYCG	2 cut(s)	209, 311
BshFI	GGCC	6 cut(s)	152, 179, 208, 310, 410, 2340
BshVI	ATCGAT	1 cut(s)	1069
BsiEI	CGRYCG	2 cut(s)	209, 311
BsiHKCI	CYCGRG	2 cut(s)	239, 611
BsiSI	CCGG	3 cut(s)	75, 282, 2649
BslFI	GGGAC	2 cut(s)	74, 2845
BslI	CCNNNNNNNGG	3 cut(s)	74, 2778, 2779
BsmAI	GTCTC	3 cut(s)	32, 1188, 1244
BsmBI	CGTCTC	1 cut(s)	32
BsmFI	GGGAC	2 cut(s)	74, 2845
BsmI	GAATGC	6 cut(s)	309, 1201, 1408, 2328, 2390, 2759
BsnI	GGCC	6 cut(s)	152, 179, 208, 310, 410, 2340
BsoBI	CYCGRG	2 cut(s)	239, 611
Bsp119I	TTCGAA	1 cut(s)	161
Bsp1286I	GDGCHC	1 cut(s)	2034
Bsp1720I	GCTNAGC	1 cut(s)	1275
Bsp19I	CCATGG	2 cut(s)	265, 2335
BspANI	GGCC	6 cut(s)	152, 179, 208, 310, 410, 2340
BspDI	ATCGAT	1 cut(s)	1069
BspFNI	CGCG	5 cut(s)	19, 94, 122, 176, 205
BspHI	TCATGA	1 cut(s)	2079
BspLI	GGNNCC	8 cut(s)	48, 89, 90, 271, 546, 732, 2622, 2653
BspMI	ACCTGC	1 cut(s)	2608
BspPI	GGATC	5 cut(s)	725, 738, 1012, 2208, 2264
BspT104I	TTCGAA	1 cut(s)	161
BsrDI	GCAATG	3 cut(s)	1215, 1624, 2764
BsrI	ACTGG	8 cut(s)	55, 465, 520, 871, 1030, 1947, 2127, 2435
BssECI	CCNNGG	8 cut(s)	83, 92, 174, 203, 265, 1284, 2138, 2335
BssNI	GRCGYC	1 cut(s)	285
BssSI	CACGAG	1 cut(s)	1972
BssT1I	CCWWGG	5 cut(s)	83, 265, 1284, 2138, 2335
Bst2BI	CACGAG	1 cut(s)	1972
Bst2UI	CCWGG	3 cut(s)	290, 1159, 2611
Bst4CI	ACNGT	8 cut(s)	491, 893, 910, 1481, 1514, 2316, 2467, 2723
Bst6I	CTCTTC	3 cut(s)	182, 1857, 1932
BstACI	GRCGYC	1 cut(s)	285
BstAPI	GCANNNNNTGC	2 cut(s)	1412, 2431
BstBI	TTCGAA	1 cut(s)	161
BstC8I	GCNNGC	8 cut(s)	80, 174, 628, 654, 1057, 1281, 2326, 2598
BstDSI	CCRYGG	5 cut(s)	92, 174, 203, 265, 2335
BstF5I	GGATG	9 cut(s)	334, 571, 1101, 1333, 1375, 2590, 2619, 2655, 2821
BstFNI	CGCG	5 cut(s)	19, 94, 122, 176, 205
BstH2I	RGCGCY	3 cut(s)	1015, 1045, 2365
BstHHI	GCGC	5 cut(s)	21, 124, 1014, 1044, 2364
BstMAI	GTCTC	3 cut(s)	32, 1188, 1244
BstMCI	CGRYCG	2 cut(s)	209, 311
BstNI	CCWGG	3 cut(s)	290, 1159, 2611
BstNSI	RCATGY	2 cut(s)	656, 2289
BstSCI	CCNGG	3 cut(s)	288, 1157, 2609
BstSFI	CTRYAG	3 cut(s)	1147, 1376, 2631
BstUI	CGCG	5 cut(s)	19, 94, 122, 176, 205
BstV1I	GCAGC	7 cut(s)	25, 183, 975, 1043, 2333, 2725, 2743
BstV2I	GAAGAC	3 cut(s)	123, 740, 2685
BstX2I	RGATCY	4 cut(s)	136, 721, 730, 2200
BstXI	CCANNNNNNTGG	1 cut(s)	1583
BstYI	RGATCY	4 cut(s)	136, 721, 730, 2200
BstZI	CGGCCG	2 cut(s)	206, 308
Bsu15I	ATCGAT	1 cut(s)	1069
BsuRI	GGCC	6 cut(s)	152, 179, 208, 310, 410, 2340
BsuTUI	ATCGAT	1 cut(s)	1069
BtgI	CCRYGG	5 cut(s)	92, 174, 203, 265, 2335
BtsCI	GGATG	9 cut(s)	334, 571, 1101, 1333, 1375, 2590, 2619, 2655, 2821
BtsIMutI	CAGTG	6 cut(s)	458, 683, 2134, 2402, 2499, 2829
BveI	ACCTGC	1 cut(s)	2608
Cac8I	GCNNGC	8 cut(s)	80, 174, 628, 654, 1057, 1281, 2326, 2598
CaiI	CAGNNNCTG	1 cut(s)	2597
CciI	TCATGA	1 cut(s)	2079
CciNI	GCGGCCGC	2 cut(s)	206, 308
CfoI	GCGC	5 cut(s)	21, 124, 1014, 1044, 2364
Cfr13I	GGNCC	4 cut(s)	88, 545, 1814, 2169
Cfr42I	CCGCGG	3 cut(s)	95, 177, 206
ClaI	ATCGAT	1 cut(s)	1069
CseI	GACGC	2 cut(s)	274, 605
Csp6I	GTAC	7 cut(s)	455, 809, 957, 1260, 1958, 2576, 2737
CspCI	CAANNNNNGTGG	2 cut(s)	2217, 2252
CviQI	GTAC	7 cut(s)	455, 809, 957, 1260, 1958, 2576, 2737
DraI	TTTAAA	1 cut(s)	970
DraIII	CACNNNGTG	1 cut(s)	540
EaeI	YGGCCR	4 cut(s)	177, 206, 308, 408
EagI	CGGCCG	2 cut(s)	206, 308
Eam1104I	CTCTTC	3 cut(s)	182, 1857, 1932
EarI	CTCTTC	3 cut(s)	182, 1857, 1932
EclXI	CGGCCG	2 cut(s)	206, 308
Eco130I	CCWWGG	5 cut(s)	83, 265, 1284, 2138, 2335
Eco24I	GRGCYC	1 cut(s)	2034
Eco47I	GGWCC	4 cut(s)	88, 545, 1814, 2169
Eco47III	AGCGCT	1 cut(s)	1043
Eco52I	CGGCCG	2 cut(s)	206, 308
Eco57I	CTGAAG	5 cut(s)	117, 734, 1160, 1956, 2397
Eco88I	CYCGRG	2 cut(s)	239, 611
EcoO109I	RGGNCCY	4 cut(s)	88, 545, 1814, 2169
EcoRII	CCWGG	3 cut(s)	288, 1157, 2609
EcoT14I	CCWWGG	5 cut(s)	83, 265, 1284, 2138, 2335
EcoT22I	ATGCAT	2 cut(s)	424, 2590
EcoT38I	GRGCYC	1 cut(s)	2034
ErhI	CCWWGG	5 cut(s)	83, 265, 1284, 2138, 2335
Esp3I	CGTCTC	1 cut(s)	32
FaqI	GGGAC	2 cut(s)	74, 2845
FauI	CCCGC	4 cut(s)	99, 181, 1048, 1697
FauNDI	CATATG	1 cut(s)	2684
FbaI	TGATCA	1 cut(s)	583
FokI	GGATG	9 cut(s)	341, 578, 1088, 1340, 1382, 2597, 2626, 2642, 2828
FriOI	GRGCYC	1 cut(s)	2034
GlaI	GCGC	5 cut(s)	20, 123, 1013, 1043, 2363
GsaI	CCCAGC	2 cut(s)	483, 1038
HaeII	RGCGCY	3 cut(s)	1015, 1045, 2365
HaeIII	GGCC	6 cut(s)	152, 179, 208, 310, 410, 2340
HapII	CCGG	3 cut(s)	75, 282, 2649
HgaI	GACGC	2 cut(s)	274, 605
HhaI	GCGC	5 cut(s)	21, 124, 1014, 1044, 2364
Hin1I	GRCGYC	1 cut(s)	285
Hin6I	GCGC	5 cut(s)	19, 122, 1012, 1042, 2362
HinP1I	GCGC	5 cut(s)	19, 122, 1012, 1042, 2362
HincII	GTYRAC	2 cut(s)	1023, 1164
HindII	GTYRAC	2 cut(s)	1023, 1164
HindIII	AAGCTT	1 cut(s)	1450
HpaI	GTTAAC	1 cut(s)	1023
HpaII	CCGG	3 cut(s)	75, 282, 2649
HphI	GGTGA	4 cut(s)	374, 1526, 2127, 2155
Hpy166II	GTNNAC	6 cut(s)	809, 1023, 1164, 1960, 2146, 2497
Hpy8I	GTNNAC	6 cut(s)	809, 1023, 1164, 1960, 2146, 2497
Hpy99I	CGWCG	1 cut(s)	46
HpyAV	CCTTC	8 cut(s)	106, 163, 177, 326, 400, 1042, 2191, 2421
HpyCH4III	ACNGT	8 cut(s)	491, 893, 910, 1481, 1514, 2316, 2467, 2723
Hsp92I	GRCGYC	1 cut(s)	285
HspAI	GCGC	5 cut(s)	19, 122, 1012, 1042, 2362
KflI	GGGWCCC	1 cut(s)	88
Ksp22I	TGATCA	1 cut(s)	583
KspAI	GTTAAC	1 cut(s)	1023
KspI	CCGCGG	3 cut(s)	95, 177, 206
LmnI	GCTCC	9 cut(s)	46, 77, 252, 269, 640, 1039, 2264, 2530, 2651
Lsp1109I	GCAGC	7 cut(s)	25, 183, 975, 1043, 2333, 2725, 2743
LweI	GCATC	9 cut(s)	234, 409, 431, 1402, 1991, 2440, 2575, 2597, 2604
MaeIII	GTNAC	4 cut(s)	826, 1711, 2098, 2475
MflI	RGATCY	4 cut(s)	136, 721, 730, 2200
MhlI	GDGCHC	1 cut(s)	2034
MlyI	GAGTC	8 cut(s)	199, 395, 823, 1190, 1874, 1949, 1961, 2426
MmeI	TCCRAC	2 cut(s)	543, 708
Mph1103I	ATGCAT	2 cut(s)	424, 2590
MslI	CAYNNNNRTG	2 cut(s)	1344, 1503
MspA1I	CMGCKG	6 cut(s)	94, 176, 196, 205, 1034, 2309
MspI	CCGG	3 cut(s)	75, 282, 2649
MspR9I	CCNGG	3 cut(s)	290, 1159, 2611
Mva1269I	GAATGC	6 cut(s)	309, 1201, 1408, 2328, 2390, 2759
MvaI	CCWGG	3 cut(s)	290, 1159, 2611
MvnI	CGCG	5 cut(s)	19, 94, 122, 176, 205
NcoI	CCATGG	2 cut(s)	265, 2335
NdeI	CATATG	1 cut(s)	2684
NlaIV	GGNNCC	8 cut(s)	48, 89, 90, 271, 546, 732, 2622, 2653
NmuCI	GTSAC	2 cut(s)	826, 1711
NotI	GCGGCCGC	2 cut(s)	206, 308
NsiI	ATGCAT	2 cut(s)	424, 2590
NspI	RCATGY	2 cut(s)	656, 2289
NspV	TTCGAA	1 cut(s)	161
OliI	CACNNNNGTG	1 cut(s)	1344
PaeI	GCATGC	1 cut(s)	656
PaeR7I	CTCGAG	2 cut(s)	239, 611
PagI	TCATGA	1 cut(s)	2079
PciI	ACATGT	1 cut(s)	2285
PctI	GAATGC	6 cut(s)	309, 1201, 1408, 2328, 2390, 2759
PfoI	TCCNGGA	1 cut(s)	2609
PleI	GAGTC	8 cut(s)	198, 395, 823, 1189, 1873, 1948, 1961, 2425
PpsI	GAGTC	8 cut(s)	198, 395, 823, 1189, 1873, 1948, 1961, 2425
PpuMI	RGGWCCY	4 cut(s)	88, 545, 1814, 2169
PscI	ACATGT	1 cut(s)	2285
Psp5II	RGGWCCY	4 cut(s)	88, 545, 1814, 2169
Psp6I	CCWGG	3 cut(s)	288, 1157, 2609
PspFI	CCCAGC	2 cut(s)	479, 1034
PspGI	CCWGG	3 cut(s)	288, 1157, 2609
PspN4I	GGNNCC	8 cut(s)	48, 89, 90, 271, 546, 732, 2622, 2653
PspPI	GGNCC	4 cut(s)	88, 545, 1814, 2169
PspPPI	RGGWCCY	4 cut(s)	88, 545, 1814, 2169
PstNI	CAGNNNCTG	1 cut(s)	2597
PsuI	RGATCY	4 cut(s)	136, 721, 730, 2200
PvuII	CAGCTG	2 cut(s)	1034, 2309
RsaI	GTAC	7 cut(s)	456, 810, 958, 1261, 1959, 2577, 2738
RsaNI	GTAC	7 cut(s)	455, 809, 957, 1260, 1958, 2576, 2737
RseI	CAYNNNNRTG	2 cut(s)	1344, 1503
SacII	CCGCGG	3 cut(s)	95, 177, 206
Sau96I	GGNCC	4 cut(s)	88, 545, 1814, 2169
SchI	GAGTC	8 cut(s)	199, 395, 823, 1190, 1874, 1949, 1961, 2426
ScrFI	CCNGG	3 cut(s)	290, 1159, 2611
SduI	GDGCHC	1 cut(s)	2034
SfaNI	GCATC	9 cut(s)	234, 409, 431, 1402, 1991, 2440, 2575, 2597, 2604
SfcI	CTRYAG	3 cut(s)	1147, 1376, 2631
Sfr274I	CTCGAG	2 cut(s)	239, 611
Sfr303I	CCGCGG	3 cut(s)	95, 177, 206
SfuI	TTCGAA	1 cut(s)	161
SgrBI	CCGCGG	3 cut(s)	95, 177, 206
SinI	GGWCC	4 cut(s)	88, 545, 1814, 2169
SlaI	CTCGAG	2 cut(s)	239, 611
SmiMI	CAYNNNNRTG	2 cut(s)	1344, 1503
SmlI	CTYRAG	4 cut(s)	239, 611, 668, 2801
SmoI	CTYRAG	4 cut(s)	239, 611, 668, 2801
SpeI	ACTAGT	2 cut(s)	875, 2854
SphI	GCATGC	1 cut(s)	656
StyD4I	CCNGG	3 cut(s)	288, 1157, 2609
StyI	CCWWGG	5 cut(s)	83, 265, 1284, 2138, 2335
TaaI	ACNGT	8 cut(s)	491, 893, 910, 1481, 1514, 2316, 2467, 2723
TaqI	TCGA	9 cut(s)	110, 156, 161, 240, 374, 612, 934, 1069, 2420
TatI	WGTACW	3 cut(s)	1259, 1957, 2736
TscAI	CASTG	6 cut(s)	465, 683, 2134, 2409, 2499, 2836
TseFI	GTSAC	2 cut(s)	826, 1711
TseI	GCWGC	7 cut(s)	13, 196, 963, 1031, 2321, 2713, 2731
Tsp45I	GTSAC	2 cut(s)	826, 1711
TspDTI	ATGAA	8 cut(s)	17, 345, 582, 1329, 1386, 1578, 2568, 2830
TspGWI	ACGGA	4 cut(s)	59, 117, 250, 522
TspRI	CASTG	6 cut(s)	465, 683, 2134, 2409, 2499, 2836
VpaK11BI	GGWCC	4 cut(s)	88, 545, 1814, 2169
XapI	RAATTY	4 cut(s)	571, 1090, 1113, 2293
XbaI	TCTAGA	1 cut(s)	694
XceI	RCATGY	2 cut(s)	656, 2289
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1022
XhoI	CTCGAG	2 cut(s)	239, 611
XmaJI	CCTAGG	2 cut(s)	83, 2138
Zsp2I	ATGCAT	2 cut(s)	424, 2590

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.