Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0012975

Physical Location & Seq

Genomic Coordinates Reverse (-)

2695062 .. 2698050

Gene Structure 2989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1023500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGGAAAAGGACAGCCTAGCCAAACCCACTTGGAACCCTTCAGGTTTTTCCATGGAAATGCAGTCCAATGAGCTCAATTGTGCTCCCCAGCAACTTCCCAATTCCTTTTTTAATGCCAATTGGGACAATTCCTTGGATCAGACCGATCCTTTTGAGTCTGCCTTGAGCTCCATTGTCTCTTCCCCCATCGCCGCCGCGGGGAACGGCGGCGAGGGAGGAGATATGATTAGAGAACTAATTGGAAGATTAGGAAGCATTTCCAATTCAGGAGAAATATCTCCACACTCATACATTTCTAGCAACTACAACAACAGTAGTACTAACACTTCATGTTATAGCACCCCATTGAACTCTTCACAGAGAGGCAGTCTGCCAATTGAAAATTTGGCTCAATTTCAGGCAGACCCTGGATTTGTTGAGAGGGCTGCAAGATTTTCCTGCTTCGGTGGTGGTGGTGGTGGCAATTTTGGTGGCCAATTCAACTTGAATGAAGCTGAATTGGCCTACAGATCAATGGCAAGGATTGACTCTGGCAAGCTTTCGAGAGTTTCCAGCAACCAATCACTGAAAGTTGCTGCTGGATCTCAACTTGCTGTTCAAGAAACCAACAAAAGCTCTCCCCTTGATGGGAATTCAGCTCCTGATAAGAAGTTCATCAGCCGGTTTTCGAGGGCCTCCACGCCGGAAAATGGTGAGTTGGGTGATTCCAGGGAGGGATCATCAGTTTCTCAGCAGATCCCAGGTGGGGATTTGAGTATGAAAGCTGAAATAGTTACCAATTCAAGGAAAAGAAAATCTGCTGCAAGAGGAAAAGCCAAAGATTCCTCTTCATCTCACCCTGTCAAAGATGCCAAGGTTGTGGCAGAAAAAGAAGAACCAAATGCCAAGAAAAGCAAAAATGATGAAGCTTCTGGGAAAGAAAAGGAAACTTCAAAGGCAAAGACAAAGGCCAATTCAGAGACTCCTGAGGCTCCAAAGGACTACATCCATGTCAGAGCCAGAAGGGGTCAAGCCACTGATAGCCATAGTCTTGCAGAAAGGGTTCGAAGAGAGAAAATTAGCGAAAGGATGAAGTTTCTTCAAGATCTTGTTCCTGGTTGCAACAAGGTGACCGGGAAAGCAGTGATGCTAGATGAAATTATAAACTACGTGCAGTCGTTGCAGTGCCAGGTTGAGTTTCTTTCTATGAAGTTGTCAACTGTGAATCCGAGGATGGAGTTGAACATGGAGGCTCTTCTGTCAAAGGATATCATTCAGTCTCGTGGATCTTTACAAAATGCGCTTTACCAGTTAGATTCTTCTGTGCCTTCATTCCCTTTCGGATACCAGCCCCAGCAACTGCCGCCTTTACATAGCAGCGGCATCTCTAGTGCGACAGACACACAATTTCCAGCAAACCCTCTAAACTCCGCACTGCGTCAAAGTCACGGCATGCAATTGCCTGCTTTTGACAGATTTGGTGAAGCAGCATCTCAAATGCCAACATTGTTCGAGGATGACCTCCAAAGCGTGGTGCAGATGGGTTTTGGCCAGATTCAGCAGGAGAGTTTTCATGGGGCTTCAGCTCAGATGAAAGTAGAGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0044212 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

529

Amino Acids

57.08

Weight (kDa)

6.25

Isoelectric Point (pI)

46.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	341 - 388	2e-06	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	346 - 388	1e-05	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23690
fragaria_vesca	FvH4_4g12760 FvH4_4g12760
malus_domestica	MD04G1023500.v1.1
prunus_persica	Prupe.1G173300_v2.0.a1 Prupe.1G173300_v2.0.a1
pyrus_communis	pycom04g02000
rosa_chinensis	RchiOBHm_Chr4g0412071
rosa_laevigata	RLG00000008324
rosa_multiflora	Rmu_sc0000711.1_g000061 Rmu_sc0000711.1_g000062
rosa_roxburghii	Rroxscaffold_5G00356350
rosa_rugosa	Rorug04G0106600
rosa_samantha	Rh4AG171200 Rh4BG170000 Rh4CG182100 Rh4DG165500
rosa_wichuraiana	Rw4G014270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1142
AccB7I	CCANNNNNTGG	1 cut(s)	1510
AccII	CGCG	1 cut(s)	197
AciI	CCGC	7 cut(s)	192, 195, 197, 207, 1343, 1359, 1410
AclWI	GGATC	6 cut(s)	140, 144, 589, 724, 730, 1273
AcoI	YGGCCR	2 cut(s)	472, 1528
AcsI	RAATTY	2 cut(s)	382, 631
AcuI	CTGAAG	2 cut(s)	24, 1545
AfaI	GTAC	1 cut(s)	319
AfiI	CCNNNNNNNGG	7 cut(s)	198, 626, 627, 689, 745, 783, 1510
AgsI	TTSAA	9 cut(s)	349, 380, 481, 487, 599, 783, 933, 1082, 1222
AjnI	CCWGG	5 cut(s)	406, 707, 739, 1093, 1167
Alw21I	GWGCWC	3 cut(s)	75, 85, 170
Alw26I	GTCTC	3 cut(s)	181, 953, 1263
AlwI	GGATC	6 cut(s)	140, 144, 589, 724, 730, 1273
AlwNI	CAGNNNCTG	3 cut(s)	407, 641, 1339
AoxI	GGCC	5 cut(s)	472, 501, 672, 948, 1528
ApeKI	GCWGC	5 cut(s)	425, 575, 800, 1356, 1466
ApoI	RAATTY	2 cut(s)	382, 631
ArsI	GACNNNNNNTTYG	2 cut(s)	395, 427
Asp700I	GAANNNNTTC	2 cut(s)	256, 1041
AspLEI	GCGC	1 cut(s)	1282
AspS9I	GGNCC	1 cut(s)	672
AsuC2I	CCSGG	1 cut(s)	1114
AsuHPI	GGTGA	5 cut(s)	704, 713, 827, 1120, 1472
AsuII	TTCGAA	1 cut(s)	1045
AxyI	CCTNAGG	1 cut(s)	966
BalI	TGGCCA	2 cut(s)	474, 1530
BanII	GRGCYC	2 cut(s)	75, 170
BarI	GAAGNNNNNNTAC	2 cut(s)	310, 342
BauI	CACGAG	1 cut(s)	1260
Bbv12I	GWGCWC	3 cut(s)	75, 85, 170
BbvI	GCAGC	5 cut(s)	412, 562, 787, 1368, 1478
BccI	CCATC	4 cut(s)	194, 620, 1207, 1513
BceAI	ACGGC	2 cut(s)	220, 1444
BciT130I	CCWGG	5 cut(s)	408, 709, 741, 1095, 1169
BciVI	GTATCC	1 cut(s)	1316
BcnI	CCSGG	1 cut(s)	1114
BcoDI	GTCTC	3 cut(s)	181, 953, 1263
BfaI	CTAG	4 cut(s)	17, 297, 1130, 1368
BfmI	CTRYAG	1 cut(s)	505
BfuI	GTATCC	1 cut(s)	1316
BglII	AGATCT	1 cut(s)	1084
BmcAI	AGTACT	1 cut(s)	319
Bme1390I	CCNGG	6 cut(s)	408, 709, 741, 1095, 1114, 1169
BmgT120I	GGNCC	1 cut(s)	672
BmiI	GGNNCC	2 cut(s)	35, 972
BmrFI	CCNGG	6 cut(s)	408, 709, 741, 1095, 1114, 1169
BmsI	GCATC	4 cut(s)	838, 1116, 1371, 1478
Bpu14I	TTCGAA	1 cut(s)	1045
BpuEI	CTTGAG	1 cut(s)	184
BpuMI	CCSGG	1 cut(s)	1114
BsaAI	YACGTR	1 cut(s)	1150
BsaJI	CCNNGG	8 cut(s)	51, 132, 195, 406, 708, 739, 852, 1208
Bsc4I	CCNNNNNNNGG	7 cut(s)	198, 626, 627, 689, 745, 783, 1510
Bse118I	RCCGGY	1 cut(s)	660
Bse1I	ACTGG	1 cut(s)	1288
Bse21I	CCTNAGG	1 cut(s)	966
BseBI	CCWGG	5 cut(s)	408, 709, 741, 1095, 1169
BseDI	CCNNGG	8 cut(s)	51, 132, 195, 406, 708, 739, 852, 1208
BseGI	GGATG	4 cut(s)	984, 1074, 1218, 1501
BseLI	CCNNNNNNNGG	7 cut(s)	198, 626, 627, 689, 745, 783, 1510
BseMII	CTCAG	3 cut(s)	743, 957, 1580
BseNI	ACTGG	1 cut(s)	1288
BseRI	GAGGAG	1 cut(s)	231
BseXI	GCAGC	5 cut(s)	412, 562, 787, 1368, 1478
BseYI	CCCAGC	2 cut(s)	87, 1332
BsgI	GTGCAG	2 cut(s)	1172, 1535
Bsh1236I	CGCG	1 cut(s)	197
BshFI	GGCC	5 cut(s)	474, 503, 674, 950, 1530
BsiHKAI	GWGCWC	3 cut(s)	75, 85, 170
BsiSI	CCGG	3 cut(s)	661, 683, 1113
BslFI	GGGAC	1 cut(s)	137
BslI	CCNNNNNNNGG	7 cut(s)	198, 626, 627, 689, 745, 783, 1510
BsmAI	GTCTC	3 cut(s)	181, 953, 1263
BsmFI	GGGAC	1 cut(s)	137
BsnI	GGCC	5 cut(s)	474, 503, 674, 950, 1530
Bsp119I	TTCGAA	1 cut(s)	1045
Bsp1286I	GDGCHC	3 cut(s)	75, 85, 170
Bsp143I	GATC	8 cut(s)	136, 145, 509, 581, 716, 735, 1084, 1265
Bsp19I	CCATGG	1 cut(s)	51
BspACI	CCGC	7 cut(s)	192, 195, 197, 207, 1343, 1359, 1410
BspANI	GGCC	5 cut(s)	474, 503, 674, 950, 1530
BspCNI	CTCAG	3 cut(s)	742, 958, 1579
BspFNI	CGCG	1 cut(s)	197
BspLI	GGNNCC	2 cut(s)	35, 972
BspPI	GGATC	6 cut(s)	140, 144, 589, 724, 730, 1273
BspQI	GCTCTTC	1 cut(s)	1239
BspT104I	TTCGAA	1 cut(s)	1045
BsrFI	RCCGGY	1 cut(s)	660
BsrI	ACTGG	1 cut(s)	1288
BssAI	RCCGGY	1 cut(s)	660
BssECI	CCNNGG	8 cut(s)	51, 132, 195, 406, 708, 739, 852, 1208
BssMI	GATC	8 cut(s)	136, 145, 509, 581, 716, 735, 1084, 1265
BssSI	CACGAG	1 cut(s)	1260
BssT1I	CCWWGG	3 cut(s)	51, 132, 852
Bst2BI	CACGAG	1 cut(s)	1260
Bst2UI	CCWGG	5 cut(s)	408, 709, 741, 1095, 1169
Bst4CI	ACNGT	2 cut(s)	314, 1201
Bst6I	CTCTTC	5 cut(s)	184, 358, 832, 1042, 1239
BstAPI	GCANNNNNTGC	1 cut(s)	1159
BstBAI	YACGTR	1 cut(s)	1150
BstBI	TTCGAA	1 cut(s)	1045
BstC8I	GCNNGC	3 cut(s)	536, 1433, 1443
BstDEI	CTNAG	3 cut(s)	729, 966, 1566
BstDSI	CCRYGG	2 cut(s)	51, 195
BstEII	GGTNACC	1 cut(s)	1108
BstF5I	GGATG	4 cut(s)	984, 1074, 1218, 1501
BstFNI	CGCG	1 cut(s)	197
BstHHI	GCGC	1 cut(s)	1282
BstKTI	GATC	8 cut(s)	139, 148, 512, 584, 719, 738, 1087, 1268
BstMAI	GTCTC	3 cut(s)	181, 953, 1263
BstMBI	GATC	8 cut(s)	136, 145, 509, 581, 716, 735, 1084, 1265
BstMWI	GCNNNNNNNGC	3 cut(s)	500, 1159, 1342
BstNI	CCWGG	5 cut(s)	408, 709, 741, 1095, 1169
BstNSI	RCATGY	1 cut(s)	1435
BstPI	GGTNACC	1 cut(s)	1108
BstSCI	CCNGG	6 cut(s)	406, 707, 739, 1093, 1112, 1167
BstSFI	CTRYAG	1 cut(s)	505
BstUI	CGCG	1 cut(s)	197
BstV1I	GCAGC	5 cut(s)	412, 562, 787, 1368, 1478
BstX2I	RGATCY	4 cut(s)	581, 735, 1084, 1265
BstXI	CCANNNNNNTGG	1 cut(s)	859
BstYI	RGATCY	4 cut(s)	581, 735, 1084, 1265
Bsu36I	CCTNAGG	1 cut(s)	966
BsuI	GTATCC	1 cut(s)	1316
BsuRI	GGCC	5 cut(s)	474, 503, 674, 950, 1530
BtgI	CCRYGG	2 cut(s)	51, 195
BtgZI	GCGATG	1 cut(s)	172
BtsCI	GGATG	4 cut(s)	984, 1074, 1218, 1501
BtsI	GCAGTG	3 cut(s)	1128, 1169, 1412
BtsIMutI	CAGTG	5 cut(s)	563, 1014, 1128, 1169, 1412
Cac8I	GCNNGC	3 cut(s)	536, 1433, 1443
CaiI	CAGNNNCTG	3 cut(s)	407, 641, 1339
CfoI	GCGC	1 cut(s)	1282
Cfr10I	RCCGGY	1 cut(s)	660
Cfr13I	GGNCC	1 cut(s)	672
Cfr42I	CCGCGG	1 cut(s)	198
CseI	GACGC	1 cut(s)	1406
Csp6I	GTAC	1 cut(s)	318
CspCI	CAANNNNNGTGG	2 cut(s)	451, 486
CviAII	CATG	6 cut(s)	52, 330, 989, 1225, 1432, 1553
CviQI	GTAC	1 cut(s)	318
DdeI	CTNAG	3 cut(s)	729, 966, 1566
DpnI	GATC	8 cut(s)	138, 147, 511, 583, 718, 737, 1086, 1267
DpnII	GATC	8 cut(s)	136, 145, 509, 581, 716, 735, 1084, 1265
EaeI	YGGCCR	2 cut(s)	472, 1528
Eam1104I	CTCTTC	5 cut(s)	184, 358, 832, 1042, 1239
EarI	CTCTTC	5 cut(s)	184, 358, 832, 1042, 1239
Ecl136II	GAGCTC	2 cut(s)	73, 168
Eco130I	CCWWGG	3 cut(s)	51, 132, 852
Eco24I	GRGCYC	2 cut(s)	75, 170
Eco32I	GATATC	1 cut(s)	1249
Eco53kI	GAGCTC	2 cut(s)	73, 168
Eco57I	CTGAAG	2 cut(s)	24, 1545
Eco81I	CCTNAGG	1 cut(s)	966
Eco91I	GGTNACC	1 cut(s)	1108
EcoICRI	GAGCTC	2 cut(s)	73, 168
EcoO109I	RGGNCCY	1 cut(s)	672
EcoO65I	GGTNACC	1 cut(s)	1108
EcoRI	GAATTC	1 cut(s)	631
EcoRII	CCWGG	5 cut(s)	406, 707, 739, 1093, 1167
EcoRV	GATATC	1 cut(s)	1249
EcoT14I	CCWWGG	3 cut(s)	51, 132, 852
EcoT38I	GRGCYC	2 cut(s)	75, 170
ErhI	CCWWGG	3 cut(s)	51, 132, 852
FaeI	CATG	6 cut(s)	55, 333, 992, 1228, 1435, 1556
FalI	AAGNNNNNCTT	1 cut(s)	1566
FaqI	GGGAC	1 cut(s)	137
FatI	CATG	6 cut(s)	51, 329, 988, 1224, 1431, 1552
FauI	CCCGC	1 cut(s)	190
FokI	GGATG	4 cut(s)	971, 1081, 1225, 1508
FriOI	GRGCYC	2 cut(s)	75, 170
FspBI	CTAG	4 cut(s)	17, 297, 1130, 1368
GlaI	GCGC	1 cut(s)	1281
GsaI	CCCAGC	2 cut(s)	91, 1336
HaeIII	GGCC	5 cut(s)	474, 503, 674, 950, 1530
HapII	CCGG	3 cut(s)	661, 683, 1113
HgaI	GACGC	1 cut(s)	1406
HhaI	GCGC	1 cut(s)	1282
Hin1II	CATG	6 cut(s)	55, 333, 992, 1228, 1435, 1556
Hin6I	GCGC	1 cut(s)	1280
HinP1I	GCGC	1 cut(s)	1280
HincII	GTYRAC	1 cut(s)	1197
HindII	GTYRAC	1 cut(s)	1197
HindIII	AAGCTT	2 cut(s)	536, 906
HinfI	GANTC	8 cut(s)	155, 527, 704, 821, 961, 1204, 1295, 1534
HpaII	CCGG	3 cut(s)	661, 683, 1113
HphI	GGTGA	5 cut(s)	704, 713, 827, 1120, 1472
Hpy166II	GTNNAC	1 cut(s)	1197
Hpy188I	TCNGA	6 cut(s)	141, 958, 995, 1209, 1322, 1569
Hpy188III	TCNNGA	6 cut(s)	267, 543, 599, 641, 965, 1082
Hpy8I	GTNNAC	1 cut(s)	1197
HpyAV	CCTTC	3 cut(s)	48, 996, 1317
HpyCH4III	ACNGT	2 cut(s)	314, 1201
HpyCH4IV	ACGT	1 cut(s)	1149
HpyCH4V	TGCA	9 cut(s)	61, 428, 803, 1034, 1101, 1153, 1162, 1435, 1516
HpyF10VI	GCNNNNNNNGC	3 cut(s)	500, 1159, 1342
HpyF3I	CTNAG	3 cut(s)	729, 966, 1566
HpySE526I	ACGT	1 cut(s)	1149
Hsp92II	CATG	6 cut(s)	55, 333, 992, 1228, 1435, 1556
HspAI	GCGC	1 cut(s)	1280
KspI	CCGCGG	1 cut(s)	198
Kzo9I	GATC	8 cut(s)	136, 145, 509, 581, 716, 735, 1084, 1265
LguI	GCTCTTC	1 cut(s)	1239
LmnI	GCTCC	4 cut(s)	88, 173, 643, 976
Lsp1109I	GCAGC	5 cut(s)	412, 562, 787, 1368, 1478
LweI	GCATC	4 cut(s)	838, 1116, 1371, 1478
MaeI	CTAG	4 cut(s)	17, 297, 1130, 1368
MaeII	ACGT	1 cut(s)	1149
MaeIII	GTNAC	3 cut(s)	772, 1108, 1424
MalI	GATC	8 cut(s)	138, 147, 511, 583, 718, 737, 1086, 1267
MboI	GATC	8 cut(s)	136, 145, 509, 581, 716, 735, 1084, 1265
MboII	GAAGA	9 cut(s)	171, 255, 345, 819, 884, 1059, 1070, 1226, 1290
MfeI	CAATTG	4 cut(s)	76, 118, 375, 1436
MflI	RGATCY	4 cut(s)	581, 735, 1084, 1265
MhlI	GDGCHC	3 cut(s)	75, 85, 170
MlsI	TGGCCA	2 cut(s)	474, 1530
MluNI	TGGCCA	2 cut(s)	474, 1530
MlyI	GAGTC	3 cut(s)	164, 521, 955
Mox20I	TGGCCA	2 cut(s)	474, 1530
MroXI	GAANNNNTTC	2 cut(s)	256, 1041
MscI	TGGCCA	2 cut(s)	474, 1530
MseI	TTAA	2 cut(s)	111, 1585
MslI	CAYNNNNRTG	1 cut(s)	56
Msp20I	TGGCCA	2 cut(s)	474, 1530
MspA1I	CMGCKG	2 cut(s)	197, 1359
MspI	CCGG	3 cut(s)	661, 683, 1113
MspR9I	CCNGG	6 cut(s)	408, 709, 741, 1095, 1114, 1169
MunI	CAATTG	4 cut(s)	76, 118, 375, 1436
MvaI	CCWGG	5 cut(s)	408, 709, 741, 1095, 1169
MvnI	CGCG	1 cut(s)	197
MwoI	GCNNNNNNNGC	3 cut(s)	500, 1159, 1342
NciI	CCSGG	1 cut(s)	1114
NcoI	CCATGG	1 cut(s)	51
NdeII	GATC	8 cut(s)	136, 145, 509, 581, 716, 735, 1084, 1265
NlaIII	CATG	6 cut(s)	55, 333, 992, 1228, 1435, 1556
NlaIV	GGNNCC	2 cut(s)	35, 972
NmuCI	GTSAC	2 cut(s)	1108, 1424
NspI	RCATGY	1 cut(s)	1435
NspV	TTCGAA	1 cut(s)	1045
PaeI	GCATGC	1 cut(s)	1435
PciSI	GCTCTTC	1 cut(s)	1239
PdmI	GAANNNNTTC	2 cut(s)	256, 1041
PfeI	GAWTC	5 cut(s)	704, 821, 1204, 1295, 1534
PflMI	CCANNNNNTGG	1 cut(s)	1510
PleI	GAGTC	3 cut(s)	163, 521, 955
PpsI	GAGTC	3 cut(s)	163, 521, 955
Ppu21I	YACGTR	1 cut(s)	1150
PsiI	TTATAA	1 cut(s)	1142
Psp124BI	GAGCTC	2 cut(s)	75, 170
Psp6I	CCWGG	5 cut(s)	406, 707, 739, 1093, 1167
PspEI	GGTNACC	1 cut(s)	1108
PspFI	CCCAGC	2 cut(s)	87, 1332
PspGI	CCWGG	5 cut(s)	406, 707, 739, 1093, 1167
PspN4I	GGNNCC	2 cut(s)	35, 972
PspPI	GGNCC	1 cut(s)	672
PstNI	CAGNNNCTG	3 cut(s)	407, 641, 1339
PsuI	RGATCY	4 cut(s)	581, 735, 1084, 1265
RsaI	GTAC	1 cut(s)	319
RsaNI	GTAC	1 cut(s)	318
RseI	CAYNNNNRTG	1 cut(s)	56
SacI	GAGCTC	2 cut(s)	75, 170
SacII	CCGCGG	1 cut(s)	198
SapI	GCTCTTC	1 cut(s)	1239
SaqAI	TTAA	2 cut(s)	111, 1585
Sau3AI	GATC	8 cut(s)	136, 145, 509, 581, 716, 735, 1084, 1265
Sau96I	GGNCC	1 cut(s)	672
ScaI	AGTACT	1 cut(s)	319
SchI	GAGTC	3 cut(s)	164, 521, 955
ScrFI	CCNGG	6 cut(s)	408, 709, 741, 1095, 1114, 1169
SduI	GDGCHC	3 cut(s)	75, 85, 170
SfaNI	GCATC	4 cut(s)	838, 1116, 1371, 1478
SfcI	CTRYAG	1 cut(s)	505
Sfr303I	CCGCGG	1 cut(s)	198
SfuI	TTCGAA	1 cut(s)	1045
SgrBI	CCGCGG	1 cut(s)	198
SmiMI	CAYNNNNRTG	1 cut(s)	56
SmlI	CTYRAG	1 cut(s)	163
SmoI	CTYRAG	1 cut(s)	163
SphI	GCATGC	1 cut(s)	1435
SsiI	CCGC	7 cut(s)	192, 195, 197, 207, 1343, 1359, 1410
SspMI	CTAG	4 cut(s)	17, 297, 1130, 1368
SstI	GAGCTC	2 cut(s)	75, 170
StyD4I	CCNGG	6 cut(s)	406, 707, 739, 1093, 1112, 1167
StyI	CCWWGG	3 cut(s)	51, 132, 852
TaaI	ACNGT	2 cut(s)	314, 1201
TaiI	ACGT	1 cut(s)	1152
TaqI	TCGA	4 cut(s)	542, 668, 1045, 1491
TaqII	GACCGA	1 cut(s)	158
TatI	WGTACW	1 cut(s)	317
TauI	GCSGC	5 cut(s)	194, 197, 210, 1345, 1362
TfiI	GAWTC	5 cut(s)	704, 821, 1204, 1295, 1534
Tru1I	TTAA	2 cut(s)	111, 1585
Tru9I	TTAA	2 cut(s)	111, 1585
TscAI	CASTG	5 cut(s)	570, 1021, 1128, 1169, 1419
TseFI	GTSAC	2 cut(s)	1108, 1424
TseI	GCWGC	5 cut(s)	425, 575, 800, 1356, 1466
Tsp45I	GTSAC	2 cut(s)	1108, 1424
TspRI	CASTG	5 cut(s)	570, 1021, 1128, 1169, 1419
Van91I	CCANNNNNTGG	1 cut(s)	1510
XapI	RAATTY	2 cut(s)	382, 631
XceI	RCATGY	1 cut(s)	1435
XmnI	GAANNNNTTC	2 cut(s)	256, 1041
XspI	CTAG	4 cut(s)	17, 297, 1130, 1368
ZrmI	AGTACT	1 cut(s)	319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.