Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0006069

Physical Location & Seq

Genomic Coordinates Reverse (-)

4313491 .. 4320866

Gene Structure 7376 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1039400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGACGCTGGATTCGTCGATGCCAGGGAGCTCTGGATATTTGGATTTGCATCCGGAGAGGAAAATGTTTTACTTCAAGAATCCATACATTCTGGGTCTGACTGTGGTGGCTGGGATTGGCGGGCTCCTCTTTGGCTACGACACCGGTGTGATTTCAGGGGCCCTTCTGTATATCAAAGACGATTTTGAGGTTGTCAAGGACAGTAGTTTCCTTCAGGAAACAATTGTAAGCATGGCCTTGGTTGGTGCTATTATTGGAGCTGCTGCTGGGGGTTGGATTAACGATTCTTATGGACGTAAGAAGGCTACTCTTCTTGCTGATGTTGTCTTTGCTATTGGGGCTGTTGTCATGGCTGCTGCTCCAGATCCATATGTTCTTATACTGGGGCGACTACTGGTTGGCCTCGGTGTTGGTGTGGCATCTGTTACTGCTCCTGTTTATATTGCAGAAGCATCACCATCAGAAATAAGGGGAGGACTAGTGAGCACGAATGTTCTTATGATAACTGGAGGACAATTTCTTTCCTACCTCGTAAATCTTGGTTTTACAGAGGTCCCTGGGACATGGCGATGGATGCTTGGAGTATCAGCTGTTCCAGCTGTCATTCAGTTCACTCTTATGCTGTTTCTGCCAGAGTCTCCCAGATGGCTTTTTCTGAAGGATGATAAAGATAAAGCCGTTGATGTGATGTCCAAAATATATGATGTGGCGCGCCTAGAGGACGAAATAGATTACCTTTCTTCTCAAGCAGAGGAAGAGCAACGTAAGAAGAAGAGTGTTAGCTACTTAAATGTTTTCAGATCAAAAGAAATTAGACTTGCGTTTGTGGCTGGTGCTGGACTTCAGGCATTTCAGCAATTCACGGGTATCAACACGGTCATGTACTACAGCCCAACAATCGTACAGATGGCTGGCATCCAATCCAACCAGTTAGCTATTTTACTGTCTCTAATTGTGGCCGCCATGAACGCTGCCGGAACAGTTCTTGGGATTTATCTTATTGACCATTTTGGCCGAAAGAAGCTGGCCCTCTCGAGCTTAAGTGGTGTTATTGTATCACTTGTCATCCTCTCGGGTGCTTTTTTCTTTCAGTCGTCTGGTTCTACAAGTGTAATCTATGGGTATATAGCAGTTATAGGTTTAGCCCTATACATTGCTTTCTTTGCACCGGGGATGGGACCTGTGCCATGGACCGTGAACTCGGAGATATATCCCGAAGCATATAGAGGGATATGTGGGGGCATGTCAGCTACTGTTAATTGGGTATCAAATTTGATTGTGGCCCAAACATTCCTTTCGGTCGCTGAATCTGTGGGAACTGGTGCAACTTTCTTGATCCTTGCGGTTGTGGCCGTCATTGCGTTTATTTTTGTGATCGTGTACCTTCCGGAGACAAAGGGCTTGACATTTGAGGAAGTGGAAAGGATATGGAAGGAGAGAGCTTGGGGCAGCAGTGGTTGCAACACTCAGAGCCTTCTTGAGCAAGGAGATGAGTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005365 GO:0005366 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0009705 GO:0015075 GO:0015077 GO:0015078 GO:0015166 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015791 GO:0015798 GO:0015850 GO:0016020 GO:0016021 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0031224 GO:0031226 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1901618 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

500

Amino Acids

53.61

Weight (kDa)

4.98

Isoelectric Point (pI)

36.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	34 - 477	3.1e-128	Sugar (and other) transporter
MFS_1	PF07690	39 - 426	3.3e-32	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43330
fragaria_vesca	FvH4_4g11240 FvH4_4g11240 FvH4_4g11240 FvH4_4g11240 FvH4_4g11240 FvH4_4g11240 FvH4_4g11240
malus_domestica	MD04G1039400.v1.1
prunus_persica	Prupe.1G189900_v2.0.a1 Prupe.1G189900_v2.0.a1
pyrus_communis	pycom04g03190
rosa_chinensis	RchiOBHm_Chr0c40g0503371 RchiOBHm_Chr0c40g0503381 RchiOBHm_Chr4g0407331
rosa_laevigata	RLG00000008733
rosa_multiflora	Rmu_sc0006262.1_g000003
rosa_roxburghii	Rroxscaffold_2G00107480 Rroxscaffold_5G00351870 Rroxscaffold_7G00213980
rosa_rugosa	Rorug04G0078700 Rorug04G0078800
rosa_samantha	Rh4AG143400 Rh4BG141100 Rh4CG149800 Rh4DG137400
rosa_wichuraiana	Rw4G011660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	712
AccIII	TCCGGA	2 cut(s)	52, 1387
AciI	CCGC	3 cut(s)	120, 960, 1343
AclWI	GGATC	2 cut(s)	359, 1330
AcoI	YGGCCR	3 cut(s)	957, 1012, 1350
AcsI	RAATTY	1 cut(s)	1270
AcuI	CTGAAG	3 cut(s)	197, 677, 827
AfaI	GTAC	3 cut(s)	884, 903, 1382
AfiI	CCNNNNNNNGG	1 cut(s)	1175
AflII	CTTAAG	1 cut(s)	1039
AgeI	ACCGGT	1 cut(s)	143
AgsI	TTSAA	1 cut(s)	76
AhlI	ACTAGT	1 cut(s)	478
AjnI	CCWGG	2 cut(s)	22, 556
AleI	CACNNNNGTG	1 cut(s)	146
Alw21I	GWGCWC	2 cut(s)	32, 488
Alw26I	GTCTC	3 cut(s)	642, 951, 1385
AlwI	GGATC	2 cut(s)	359, 1330
AlwNI	CAGNNNCTG	1 cut(s)	1253
Ama87I	CYCGRG	2 cut(s)	1033, 1072
Aor13HI	TCCGGA	2 cut(s)	52, 1387
AoxI	GGCC	8 cut(s)	159, 234, 400, 957, 1012, 1026, 1281, 1350
ApaI	GGGCCC	1 cut(s)	163
ApeKI	GCWGC	6 cut(s)	260, 263, 353, 356, 971, 1449
ApoI	RAATTY	1 cut(s)	1270
ArsI	GACNNNNNNTTYG	1 cut(s)	27
AscI	GGCGCGCC	1 cut(s)	710
AsiGI	ACCGGT	1 cut(s)	143
AspLEI	GCGC	2 cut(s)	712, 714
AspS9I	GGNCC	7 cut(s)	159, 160, 553, 1027, 1178, 1191, 1282
AsuC2I	CCSGG	1 cut(s)	1170
AsuHPI	GGTGA	1 cut(s)	447
AvaI	CYCGRG	2 cut(s)	1033, 1072
AvaII	GGWCC	3 cut(s)	553, 1178, 1191
BaeGI	GKGCMC	1 cut(s)	163
BanII	GRGCYC	3 cut(s)	32, 126, 163
Bbv12I	GWGCWC	2 cut(s)	32, 488
BbvI	GCAGC	6 cut(s)	247, 250, 340, 343, 958, 1461
BccI	CCATC	5 cut(s)	466, 564, 639, 901, 1168
BceAI	ACGGC	2 cut(s)	662, 1337
BciT130I	CCWGG	2 cut(s)	24, 558
BcnI	CCSGG	1 cut(s)	1170
BcoDI	GTCTC	3 cut(s)	642, 951, 1385
BcuI	ACTAGT	1 cut(s)	478
BfaI	CTAG	2 cut(s)	479, 716
BfmI	CTRYAG	1 cut(s)	886
BfrI	CTTAAG	1 cut(s)	1039
BisI	GCNGC	7 cut(s)	261, 264, 354, 357, 960, 972, 1450
BlsI	GCNGC	7 cut(s)	262, 265, 355, 358, 961, 973, 1451
Bme1390I	CCNGG	3 cut(s)	24, 558, 1170
Bme18I	GGWCC	3 cut(s)	553, 1178, 1191
BmeT110I	CYCGRG	2 cut(s)	1033, 1072
BmgT120I	GGNCC	7 cut(s)	159, 160, 553, 1027, 1178, 1191, 1282
BmiI	GGNNCC	5 cut(s)	125, 160, 161, 555, 1179
BmrFI	CCNGG	3 cut(s)	24, 558, 1170
BmrI	ACTGGG	1 cut(s)	392
BmsI	GCATC	6 cut(s)	9, 58, 428, 461, 564, 924
BmuI	ACTGGG	1 cut(s)	392
BpmI	CTGGAG	2 cut(s)	345, 528
BpuEI	CTTGAG	2 cut(s)	729, 1499
BpuMI	CCSGG	1 cut(s)	1170
BsaBI	GATNNNNATC	1 cut(s)	48
BsaJI	CCNNGG	7 cut(s)	23, 237, 403, 556, 557, 1169, 1187
BsaWI	WCCGGW	3 cut(s)	52, 143, 1387
BsaXI	ACNNNNNCTCC	2 cut(s)	465, 495
Bsc4I	CCNNNNNNNGG	1 cut(s)	1175
Bse118I	RCCGGY	1 cut(s)	143
Bse1I	ACTGG	5 cut(s)	387, 399, 511, 928, 1324
Bse3DI	GCAATG	2 cut(s)	1152, 1356
Bse8I	GATNNNNATC	1 cut(s)	48
BseAI	TCCGGA	2 cut(s)	52, 1387
BseBI	CCWGG	2 cut(s)	24, 558
BseDI	CCNNGG	7 cut(s)	23, 237, 403, 556, 557, 1169, 1187
BseGI	GGATG	6 cut(s)	49, 579, 667, 915, 1065, 1179
BseJI	GATNNNNATC	1 cut(s)	48
BseLI	CCNNNNNNNGG	1 cut(s)	1175
BseMI	GCAATG	2 cut(s)	1152, 1356
BseMII	CTCAG	1 cut(s)	1481
BseNI	ACTGG	5 cut(s)	387, 399, 511, 928, 1324
BsePI	GCGCGC	1 cut(s)	710
BseRI	GAGGAG	1 cut(s)	116
BseSI	GKGCMC	1 cut(s)	163
BseXI	GCAGC	6 cut(s)	247, 250, 340, 343, 958, 1461
BseYI	CCCAGC	2 cut(s)	110, 266
Bsh1236I	CGCG	1 cut(s)	712
Bsh1285I	CGRYCG	1 cut(s)	1302
BshFI	GGCC	8 cut(s)	161, 236, 402, 959, 1014, 1028, 1283, 1352
BshTI	ACCGGT	1 cut(s)	143
BsiEI	CGRYCG	1 cut(s)	1302
BsiHKAI	GWGCWC	2 cut(s)	32, 488
BsiHKCI	CYCGRG	2 cut(s)	1033, 1072
BsiSI	CCGG	5 cut(s)	53, 144, 975, 1169, 1388
BslFI	GGGAC	3 cut(s)	539, 574, 1191
BslI	CCNNNNNNNGG	1 cut(s)	1175
BsmAI	GTCTC	3 cut(s)	642, 951, 1385
BsmFI	GGGAC	3 cut(s)	539, 574, 1191
BsnI	GGCC	8 cut(s)	161, 236, 402, 959, 1014, 1028, 1283, 1352
BsoBI	CYCGRG	2 cut(s)	1033, 1072
Bsp120I	GGGCCC	1 cut(s)	159
Bsp1286I	GDGCHC	4 cut(s)	32, 126, 163, 488
Bsp13I	TCCGGA	2 cut(s)	52, 1387
Bsp143I	GATC	4 cut(s)	364, 800, 1335, 1374
Bsp19I	CCATGG	1 cut(s)	1187
BspACI	CCGC	3 cut(s)	120, 960, 1343
BspANI	GGCC	8 cut(s)	161, 236, 402, 959, 1014, 1028, 1283, 1352
BspCNI	CTCAG	1 cut(s)	1480
BspEI	TCCGGA	2 cut(s)	52, 1387
BspFNI	CGCG	1 cut(s)	712
BspLI	GGNNCC	5 cut(s)	125, 160, 161, 555, 1179
BspPI	GGATC	2 cut(s)	359, 1330
BspQI	GCTCTTC	1 cut(s)	750
BspTI	CTTAAG	1 cut(s)	1039
BsrDI	GCAATG	2 cut(s)	1152, 1356
BsrFI	RCCGGY	1 cut(s)	143
BsrI	ACTGG	5 cut(s)	387, 399, 511, 928, 1324
BssAI	RCCGGY	1 cut(s)	143
BssECI	CCNNGG	7 cut(s)	23, 237, 403, 556, 557, 1169, 1187
BssHII	GCGCGC	1 cut(s)	710
BssMI	GATC	4 cut(s)	364, 800, 1335, 1374
BssT1I	CCWWGG	2 cut(s)	237, 1187
Bst2UI	CCWGG	2 cut(s)	24, 558
Bst4CI	ACNGT	7 cut(s)	103, 203, 877, 945, 982, 1195, 1255
Bst6I	CTCTTC	3 cut(s)	315, 750, 767
BstAFI	CTTAAG	1 cut(s)	1039
BstAPI	GCANNNNNTGC	1 cut(s)	1458
BstC8I	GCNNGC	4 cut(s)	122, 712, 913, 1026
BstDEI	CTNAG	2 cut(s)	1467, 1497
BstDSI	CCRYGG	1 cut(s)	1187
BstF5I	GGATG	6 cut(s)	49, 579, 667, 915, 1065, 1179
BstFNI	CGCG	1 cut(s)	712
BstHHI	GCGC	2 cut(s)	712, 714
BstKTI	GATC	4 cut(s)	367, 803, 1338, 1377
BstMAI	GTCTC	3 cut(s)	642, 951, 1385
BstMBI	GATC	4 cut(s)	364, 800, 1335, 1374
BstMCI	CGRYCG	1 cut(s)	1302
BstNI	CCWGG	2 cut(s)	24, 558
BstNSI	RCATGY	1 cut(s)	1246
BstSCI	CCNGG	3 cut(s)	22, 556, 1168
BstSFI	CTRYAG	1 cut(s)	886
BstSLI	GKGCMC	1 cut(s)	163
BstUI	CGCG	1 cut(s)	712
BstV1I	GCAGC	6 cut(s)	247, 250, 340, 343, 958, 1461
BstX2I	RGATCY	1 cut(s)	364
BstYI	RGATCY	1 cut(s)	364
BsuRI	GGCC	8 cut(s)	161, 236, 402, 959, 1014, 1028, 1283, 1352
BtgI	CCRYGG	1 cut(s)	1187
BtgZI	GCGATG	1 cut(s)	583
BtsCI	GGATG	6 cut(s)	49, 579, 667, 915, 1065, 1179
BtsI	GCAGTG	1 cut(s)	1459
BtsIMutI	CAGTG	1 cut(s)	1459
Cac8I	GCNNGC	4 cut(s)	122, 712, 913, 1026
CaiI	CAGNNNCTG	1 cut(s)	1253
CfoI	GCGC	2 cut(s)	712, 714
Cfr10I	RCCGGY	1 cut(s)	143
Cfr13I	GGNCC	7 cut(s)	159, 160, 553, 1027, 1178, 1191, 1282
CseI	GACGC	1 cut(s)	13
Csp6I	GTAC	3 cut(s)	883, 902, 1381
CspAI	ACCGGT	1 cut(s)	143
CviAII	CATG	7 cut(s)	232, 349, 564, 880, 964, 1188, 1243
CviQI	GTAC	3 cut(s)	883, 902, 1381
DdeI	CTNAG	2 cut(s)	1467, 1497
DpnI	GATC	4 cut(s)	366, 802, 1337, 1376
DpnII	GATC	4 cut(s)	364, 800, 1335, 1374
EaeI	YGGCCR	3 cut(s)	957, 1012, 1350
Eam1104I	CTCTTC	3 cut(s)	315, 750, 767
EarI	CTCTTC	3 cut(s)	315, 750, 767
Ecl136II	GAGCTC	1 cut(s)	30
Eco130I	CCWWGG	2 cut(s)	237, 1187
Eco24I	GRGCYC	3 cut(s)	32, 126, 163
Eco47I	GGWCC	3 cut(s)	553, 1178, 1191
Eco53kI	GAGCTC	1 cut(s)	30
Eco57I	CTGAAG	3 cut(s)	197, 677, 827
Eco88I	CYCGRG	2 cut(s)	1033, 1072
EcoICRI	GAGCTC	1 cut(s)	30
EcoO109I	RGGNCCY	4 cut(s)	159, 160, 553, 1178
EcoRII	CCWGG	2 cut(s)	22, 556
EcoT14I	CCWWGG	2 cut(s)	237, 1187
EcoT38I	GRGCYC	3 cut(s)	32, 126, 163
ErhI	CCWWGG	2 cut(s)	237, 1187
FaeI	CATG	7 cut(s)	235, 352, 567, 883, 967, 1191, 1246
FaqI	GGGAC	3 cut(s)	539, 574, 1191
FatI	CATG	7 cut(s)	231, 348, 563, 879, 963, 1187, 1242
FauI	CCCGC	1 cut(s)	113
FauNDI	CATATG	1 cut(s)	370
Fnu4HI	GCNGC	7 cut(s)	261, 264, 354, 357, 960, 972, 1450
FokI	GGATG	6 cut(s)	36, 586, 674, 902, 1052, 1186
FriOI	GRGCYC	3 cut(s)	32, 126, 163
Fsp4HI	GCNGC	7 cut(s)	261, 264, 354, 357, 960, 972, 1450
FspBI	CTAG	2 cut(s)	479, 716
GlaI	GCGC	2 cut(s)	711, 713
GluI	GCNGC	7 cut(s)	261, 264, 354, 357, 960, 972, 1450
GsaI	CCCAGC	2 cut(s)	114, 270
GsuI	CTGGAG	2 cut(s)	345, 528
HaeIII	GGCC	8 cut(s)	161, 236, 402, 959, 1014, 1028, 1283, 1352
HapII	CCGG	5 cut(s)	53, 144, 975, 1169, 1388
HgaI	GACGC	1 cut(s)	13
HhaI	GCGC	2 cut(s)	712, 714
Hin1II	CATG	7 cut(s)	235, 352, 567, 883, 967, 1191, 1246
Hin6I	GCGC	2 cut(s)	710, 712
HinP1I	GCGC	2 cut(s)	710, 712
HinfI	GANTC	6 cut(s)	11, 79, 284, 635, 1307, 1493
HpaII	CCGG	5 cut(s)	53, 144, 975, 1169, 1388
HphI	GGTGA	1 cut(s)	447
Hpy166II	GTNNAC	3 cut(s)	612, 1198, 1381
Hpy188I	TCNGA	6 cut(s)	99, 463, 657, 800, 1204, 1470
Hpy8I	GTNNAC	3 cut(s)	612, 1198, 1381
Hpy99I	CGWCG	1 cut(s)	19
HpyAV	CCTTC	7 cut(s)	173, 221, 295, 652, 1394, 1426, 1484
HpyCH4III	ACNGT	7 cut(s)	103, 203, 877, 945, 982, 1195, 1255
HpyCH4IV	ACGT	2 cut(s)	295, 763
HpyCH4V	TGCA	5 cut(s)	49, 446, 1166, 1325, 1461
HpyF3I	CTNAG	2 cut(s)	1467, 1497
HpySE526I	ACGT	2 cut(s)	295, 763
Hsp92II	CATG	7 cut(s)	235, 352, 567, 883, 967, 1191, 1246
HspAI	GCGC	2 cut(s)	710, 712
Kpn2I	TCCGGA	2 cut(s)	52, 1387
Kzo9I	GATC	4 cut(s)	364, 800, 1335, 1374
LguI	GCTCTTC	1 cut(s)	750
LmnI	GCTCC	5 cut(s)	27, 129, 257, 364, 436
Lsp1109I	GCAGC	6 cut(s)	247, 250, 340, 343, 958, 1461
LweI	GCATC	6 cut(s)	9, 58, 428, 461, 564, 924
MaeI	CTAG	2 cut(s)	479, 716
MaeII	ACGT	2 cut(s)	295, 763
MaeIII	GTNAC	1 cut(s)	424
MalI	GATC	4 cut(s)	366, 802, 1337, 1376
MboI	GATC	4 cut(s)	364, 800, 1335, 1374
MboII	GAAGA	5 cut(s)	302, 732, 767, 781, 784
MfeI	CAATTG	1 cut(s)	222
MflI	RGATCY	1 cut(s)	364
MhlI	GDGCHC	4 cut(s)	32, 126, 163, 488
MluCI	AATT	7 cut(s)	222, 515, 810, 857, 951, 1258, 1270
MlyI	GAGTC	1 cut(s)	644
MmeI	TCCRAC	2 cut(s)	254, 948
MroI	TCCGGA	2 cut(s)	52, 1387
MseI	TTAA	4 cut(s)	279, 788, 1040, 1257
MslI	CAYNNNNRTG	4 cut(s)	146, 568, 617, 878
MspA1I	CMGCKG	2 cut(s)	590, 599
MspCI	CTTAAG	1 cut(s)	1039
MspI	CCGG	5 cut(s)	53, 144, 975, 1169, 1388
MspR9I	CCNGG	3 cut(s)	24, 558, 1170
MunI	CAATTG	1 cut(s)	222
MvaI	CCWGG	2 cut(s)	24, 558
MvnI	CGCG	1 cut(s)	712
NciI	CCSGG	1 cut(s)	1170
NcoI	CCATGG	1 cut(s)	1187
NdeI	CATATG	1 cut(s)	370
NdeII	GATC	4 cut(s)	364, 800, 1335, 1374
NlaIII	CATG	7 cut(s)	235, 352, 567, 883, 967, 1191, 1246
NlaIV	GGNNCC	5 cut(s)	125, 160, 161, 555, 1179
NspI	RCATGY	1 cut(s)	1246
OliI	CACNNNNGTG	1 cut(s)	146
PaeR7I	CTCGAG	1 cut(s)	1033
PalAI	GGCGCGCC	1 cut(s)	710
PasI	CCCWGGG	1 cut(s)	557
PauI	GCGCGC	1 cut(s)	710
PciSI	GCTCTTC	1 cut(s)	750
PcsI	WCGNNNNNNNCGW	1 cut(s)	11
PfeI	GAWTC	4 cut(s)	11, 79, 284, 1307
PinAI	ACCGGT	1 cut(s)	143
PkrI	GCNGC	7 cut(s)	262, 265, 355, 358, 961, 973, 1451
PleI	GAGTC	1 cut(s)	643
PpsI	GAGTC	1 cut(s)	643
PpuMI	RGGWCCY	2 cut(s)	553, 1178
Psp124BI	GAGCTC	1 cut(s)	32
Psp5II	RGGWCCY	2 cut(s)	553, 1178
Psp6I	CCWGG	2 cut(s)	22, 556
PspFI	CCCAGC	2 cut(s)	110, 266
PspGI	CCWGG	2 cut(s)	22, 556
PspN4I	GGNNCC	5 cut(s)	125, 160, 161, 555, 1179
PspOMI	GGGCCC	1 cut(s)	159
PspPI	GGNCC	7 cut(s)	159, 160, 553, 1027, 1178, 1191, 1282
PspPPI	RGGWCCY	2 cut(s)	553, 1178
PsrI	GAACNNNNNNTAC	2 cut(s)	576, 608
PstNI	CAGNNNCTG	1 cut(s)	1253
PsuI	RGATCY	1 cut(s)	364
PteI	GCGCGC	1 cut(s)	710
PvuII	CAGCTG	2 cut(s)	590, 599
RsaI	GTAC	3 cut(s)	884, 903, 1382
RsaNI	GTAC	3 cut(s)	883, 902, 1381
RseI	CAYNNNNRTG	4 cut(s)	146, 568, 617, 878
SacI	GAGCTC	1 cut(s)	32
SapI	GCTCTTC	1 cut(s)	750
SaqAI	TTAA	4 cut(s)	279, 788, 1040, 1257
SatI	GCNGC	7 cut(s)	261, 264, 354, 357, 960, 972, 1450
Sau3AI	GATC	4 cut(s)	364, 800, 1335, 1374
Sau96I	GGNCC	7 cut(s)	159, 160, 553, 1027, 1178, 1191, 1282
SchI	GAGTC	1 cut(s)	644
ScrFI	CCNGG	3 cut(s)	24, 558, 1170
SduI	GDGCHC	4 cut(s)	32, 126, 163, 488
SfaNI	GCATC	6 cut(s)	9, 58, 428, 461, 564, 924
SfcI	CTRYAG	1 cut(s)	886
Sfr274I	CTCGAG	1 cut(s)	1033
SgrAI	CRCCGGYG	1 cut(s)	143
SgsI	GGCGCGCC	1 cut(s)	710
SinI	GGWCC	3 cut(s)	553, 1178, 1191
SlaI	CTCGAG	1 cut(s)	1033
SmiMI	CAYNNNNRTG	4 cut(s)	146, 568, 617, 878
SmlI	CTYRAG	4 cut(s)	744, 1033, 1039, 1478
SmoI	CTYRAG	4 cut(s)	744, 1033, 1039, 1478
SpeI	ACTAGT	1 cut(s)	478
Sse9I	AATT	7 cut(s)	222, 515, 810, 857, 951, 1258, 1270
SsiI	CCGC	3 cut(s)	120, 960, 1343
SspMI	CTAG	2 cut(s)	479, 716
SstI	GAGCTC	1 cut(s)	32
StyD4I	CCNGG	3 cut(s)	22, 556, 1168
StyI	CCWWGG	2 cut(s)	237, 1187
TaaI	ACNGT	7 cut(s)	103, 203, 877, 945, 982, 1195, 1255
TaiI	ACGT	2 cut(s)	298, 766
TaqI	TCGA	2 cut(s)	17, 1034
TaqII	GACCGA	1 cut(s)	1288
TasI	AATT	7 cut(s)	222, 515, 810, 857, 951, 1258, 1270
TatI	WGTACW	1 cut(s)	882
TauI	GCSGC	1 cut(s)	962
TfiI	GAWTC	4 cut(s)	11, 79, 284, 1307
Tru1I	TTAA	4 cut(s)	279, 788, 1040, 1257
Tru9I	TTAA	4 cut(s)	279, 788, 1040, 1257
TscAI	CASTG	1 cut(s)	1459
TseI	GCWGC	6 cut(s)	260, 263, 353, 356, 971, 1449
TspDTI	ATGAA	1 cut(s)	980
TspRI	CASTG	1 cut(s)	1459
Vha464I	CTTAAG	1 cut(s)	1039
VpaK11BI	GGWCC	3 cut(s)	553, 1178, 1191
XapI	RAATTY	1 cut(s)	1270
XceI	RCATGY	1 cut(s)	1246
XhoI	CTCGAG	1 cut(s)	1033
XspI	CTAG	2 cut(s)	479, 716

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.