MD04G1124900.v1.1

SANTA (SANT Associated)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0000754
Physical Location & Seq
Reverse (-)
21161411 .. 21166329
4919 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1124900.v1.1.491

Sequence Viewer

Length: 2199 bp
ATGGCTTCCACTCCTGCCGCGAACCCAACCGTCCACGGCGGCGACAACGCTGATGGCTCCTACTTTCAGAAAACAGTATGTCTGCACGATTGGTGGTTGATTATAGCCGAAAATGACGTCGGAGGGAAGGGGCTAGCCGTCGCCGGCGTGACTTCTATTGAGAACGAAGCCAGGAGAGTGTTTTCGTCTGCACCAATAAGTAAAAGATTCGATATTTTCACTCTGGAGACGGTGGATGGCATCTGTGTAGCCATCAAAGGGTTCATAAACGAGCAGAAGACTATCGAAAATGGGTTTCCGTCTGAGGTTTTCAGCCATTTTGTTTTTGGCTTTCCTCCTCACTGGGAACAATGTGTTGTAAAGTTCTTTGGAGGAGATTCTAGCATTGCTGGAGCTGGTCCTGAAAGTACTTCTCATTCAGGAGTGGATGCAGGCACAGAAAGTTCTGCTCCAACTGCTGTGCATTTTGATCTGGAAGAACCTCCACATGAGCAGCTCTCTTCTGAAGATAGGCATGATGTTGAAGTCGCAAAGCAATCTTCTAAGCGGTTTATAAATGTAGCTGTTGATGACACAAAAGTTGATGACATGCCCAAGCATGCTGCTGAGGAGGAAACAGGAAGAGCGAATTTTGGATCAGGTGATTTTCAGAGTATTGGTAGACCAACGAATCTGGAAAGCAATCAGAAGAAACCCGTATCCAGATGCTTTATGAAGAATAAGATTACAAAATCTAGTGTGGCGTCAGAGGCCATCGAGAACCTTGATGGAGCATCAGTTGCAACCACTCAGTCTGGAGAGAAAGTGGACATATCAGAGGAAGATCCAAGACTTTCTTTGGGTGAACTGTTCAGAAGTTTGTCAAATCTTTTAAGGAGTAAAGGGAAAGAGAAGCAAATGCTGGAAAGTGGATTGAACTGTGAGAGAAATACAGTGGGTTCTGTTCCAGTTCCAGCAGTCTCTAAAACTGCGAGCAACACTTTAGAAAATGACAATTATAAAGGGAAGGGGAGAAGTATGTCCCATCCTTCTGCTTCTGAGTTTCAAGAACCAAGTACAGTGGATTCTGTTCCAGCAATTGCTAAAACTGTGAGCTGTTCACAAAATGGTAATTGTGAAGTAGGAGGGAGAAGTATGTCTTGTCCTTCAGATCCTGAACTTGAAGAACCAACTACATTGGATTCTGTTCCGGCAGTCTCTAAAACTTTGAGCAACACTTCACAAAATGATAATTGTGAAGTAGGAGGGGGAAGTATGTCCCGTCCTTCAGATCCTGAGCTTCAAGAACCAACTATAGTGGATTTTATTCCCACAGTCCCTAAAACTCTGGGCGACACTTCAAAAAATGATTATTGTGAAGTAGGAGGGAGAAGTATGTCCCAGCCTTCTGATTCAGAGCTTCAAGAACCAAACAGCGGGAACGTGGTAAAAAGACTAGATTTTGACTGTCTAGAAGATTTGGAACCCACCGGCATTGGAAAACAGGGACTAACAGCTCAAGTTGGAGAAGGGGCAGTTGACGCCATAACAGAAAACACATCCAGGAAGAAAACTAGGAGAAGAACTACCAATATTGTAGTTGGAGAAGGACGAATTGATGCCAAAACAGAAAACACACCCAGAAAAATGAGTAAGAGAAAAACTACCAATATTGTAGTTGGAGAAGGACGAATTGACACCAAAACAGAAAACACATCCAGGAAAAAGAGTAAGAGAAAAACTGCCAATATTGCAGTTGGAGAAGGAAAAACTGATGCCAAGAAGGAAAACACACCCAGGAAGAAAGCTAAGAGGAAAACAACCATTGATGCCGCGGAAACTCCCACTCCAGTGGAGAACAAGAAAGTGTCTATCATTTCTCCAGAATCTTTGAATTTGAAACGGTCCAGAACAGGGAGACTACTTCTACCCACCATGGAATTCTGGCGGAATCAAGCAGCAGTCTATGACTTGGATCGTAACATTACTGGAATTCAGGATGACCGACCTGTAGTAACACCATCAAGAGGTTTGCAGCAAATCTGGGTCTCAGAAAAGCAGAATACGATGATAGAGAATCTGAACACAGGTTACCGGTTGGAACAAGAATCTCAAGGAGTTTGGGGCGTACTAAAAGCAAAGAGGCACGTGTCGGTTATTTTTACAGGGATTCTAACACGGATGGGAGAGATTAGAGGCTGTAAACTCATGTCAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SANTA

Protein Analysis

733

Amino Acids

79.46

Weight (kDa)

5.95

Isoelectric Point (pI)

52.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SANTA PF09133 26 - 117 1.7e-27 SANTA (SANT Associated)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 554, 999
AatII GACGTC 1 cut(s) 120
AccI GTMKAC 1 cut(s) 661
AccII CGCG 2 cut(s) 20, 1814
AciI CCGC 7 cut(s) 18, 39, 547, 1416, 1812, 1814, 1927
AclWI GGATC 5 cut(s) 643, 818, 1145, 1265, 1962
AcsI RAATTY 4 cut(s) 628, 1873, 1919, 1971
AcuI CTGAAG 3 cut(s) 525, 1131, 1251
AcvI CACGTG 1 cut(s) 2128
AcyI GRCGYC 3 cut(s) 117, 743, 1521
AfaI GTAC 3 cut(s) 409, 1057, 2109
AfiI CCNNNNNNNGG 4 cut(s) 258, 1415, 1893, 2006
AflIII ACRYGT 1 cut(s) 2127
AgeI ACCGGT 1 cut(s) 2073
AgsI TTSAA 9 cut(s) 524, 916, 1046, 1163, 1283, 1341, 1403, 1873, 1879
AjnI CCWGG 4 cut(s) 170, 1541, 1697, 1775
AleI CACNNNNGTG 1 cut(s) 1829
AluBI AGCT 9 cut(s) 395, 496, 563, 1095, 1279, 1399, 1496, 1787, 2196
AluI AGCT 9 cut(s) 395, 496, 563, 1095, 1279, 1399, 1496, 1787, 2196
Alw26I GTCTC 5 cut(s) 221, 964, 1201, 1891, 2032
AlwI GGATC 5 cut(s) 643, 818, 1145, 1265, 1962
AlwNI CAGNNNCTG 2 cut(s) 1154, 1274
AoxI GGCC 1 cut(s) 750
ApeKI GCWGC 4 cut(s) 493, 602, 1937, 2014
ApoI RAATTY 4 cut(s) 628, 1873, 1919, 1971
ArsI GACNNNNNNTTYG 2 cut(s) 102, 134
AsiGI ACCGGT 1 cut(s) 2073
AspS9I GGNCC 2 cut(s) 398, 1884
AsuHPI GGTGA 2 cut(s) 653, 854
AsuNHI GCTAGC 1 cut(s) 133
AvaII GGWCC 2 cut(s) 398, 1884
BbrPI CACGTG 1 cut(s) 2128
BbsI GAAGAC 1 cut(s) 284
BbvCI CCTCAGC 1 cut(s) 606
BbvI GCAGC 4 cut(s) 505, 589, 1949, 2026
BccI CCATC 8 cut(s) 47, 230, 260, 761, 761, 1032, 2008, 2155
BceAI ACGGC 2 cut(s) 52, 122
BciT130I CCWGG 4 cut(s) 172, 1543, 1699, 1777
BciVI GTATCC 1 cut(s) 709
BcoDI GTCTC 5 cut(s) 221, 964, 1201, 1891, 2032
BfaI CTAG 6 cut(s) 134, 381, 735, 1436, 1451, 1554
BfmI CTRYAG 2 cut(s) 1293, 1989
BfuI GTATCC 1 cut(s) 709
BisI GCNGC 7 cut(s) 18, 40, 494, 603, 1812, 1938, 2015
BlsI GCNGC 7 cut(s) 19, 41, 495, 604, 1813, 1939, 2016
BmcAI AGTACT 1 cut(s) 409
Bme1390I CCNGG 4 cut(s) 172, 1543, 1699, 1777
Bme18I GGWCC 2 cut(s) 398, 1884
BmgT120I GGNCC 2 cut(s) 398, 1884
BmiI GGNNCC 2 cut(s) 58, 1464
BmrFI CCNGG 4 cut(s) 172, 1543, 1699, 1777
BmrI ACTGGG 1 cut(s) 352
BmsI GCATC 7 cut(s) 249, 418, 695, 782, 1588, 1744, 1798
BmtI GCTAGC 1 cut(s) 137
BmuI ACTGGG 1 cut(s) 352
BpiI GAAGAC 1 cut(s) 284
BplI GAGNNNNNCTC 2 cut(s) 482, 514
BpmI CTGGAG 5 cut(s) 245, 411, 816, 1812, 1845
Bpu10I CCTNAGC 2 cut(s) 606, 1275
BpuEI CTTGAG 2 cut(s) 1482, 2076
BsaAI YACGTR 1 cut(s) 2128
BsaHI GRCGYC 3 cut(s) 117, 743, 1521
BsaI GGTCTC 1 cut(s) 2032
BsaJI CCNNGG 4 cut(s) 34, 1775, 1812, 1914
BsaWI WCCGGW 1 cut(s) 2073
BsaXI ACNNNNNCTCC 6 cut(s) 762, 789, 792, 819, 1810, 1840
Bsc4I CCNNNNNNNGG 4 cut(s) 258, 1415, 1893, 2006
Bse118I RCCGGY 3 cut(s) 143, 1469, 2073
Bse1I ACTGG 4 cut(s) 347, 947, 1829, 1972
Bse3DI GCAATG 1 cut(s) 384
BseBI CCWGG 4 cut(s) 172, 1543, 1699, 1777
BseDI CCNNGG 4 cut(s) 34, 1775, 1812, 1914
BseGI GGATG 7 cut(s) 241, 433, 1024, 1538, 1694, 1984, 2166
BseLI CCNNNNNNNGG 4 cut(s) 258, 1415, 1893, 2006
BseMI GCAATG 1 cut(s) 384
BseMII CTCAG 6 cut(s) 294, 597, 803, 1029, 1266, 2043
BseNI ACTGG 4 cut(s) 347, 947, 1829, 1972
BseRI GAGGAG 3 cut(s) 327, 387, 623
BseXI GCAGC 4 cut(s) 505, 589, 1949, 2026
BseYI CCCAGC 1 cut(s) 1380
BsgI GTGCAG 2 cut(s) 68, 174
Bsh1236I CGCG 2 cut(s) 20, 1814
BshFI GGCC 1 cut(s) 752
BshTI ACCGGT 1 cut(s) 2073
BsiSI CCGG 4 cut(s) 144, 1190, 1470, 2074
BslFI GGGAC 5 cut(s) 1006, 1243, 1301, 1363, 1500
BslI CCNNNNNNNGG 4 cut(s) 258, 1415, 1893, 2006
BsmAI GTCTC 5 cut(s) 221, 964, 1201, 1891, 2032
BsmBI CGTCTC 1 cut(s) 221
BsmFI GGGAC 5 cut(s) 1006, 1243, 1301, 1363, 1500
BsnI GGCC 1 cut(s) 752
Bso31I GGTCTC 1 cut(s) 2032
Bsp143I GATC 6 cut(s) 469, 635, 823, 1150, 1270, 1954
Bsp19I CCATGG 1 cut(s) 1914
BspACI CCGC 7 cut(s) 18, 39, 547, 1416, 1812, 1814, 1927
BspANI GGCC 1 cut(s) 752
BspCNI CTCAG 6 cut(s) 295, 598, 802, 1030, 1267, 2042
BspFNI CGCG 2 cut(s) 20, 1814
BspLI GGNNCC 2 cut(s) 58, 1464
BspOI GCTAGC 1 cut(s) 137
BspPI GGATC 5 cut(s) 643, 818, 1145, 1265, 1962
BspQI GCTCTTC 1 cut(s) 616
BspTNI GGTCTC 1 cut(s) 2032
BsrDI GCAATG 1 cut(s) 384
BsrFI RCCGGY 3 cut(s) 143, 1469, 2073
BsrI ACTGG 4 cut(s) 347, 947, 1829, 1972
BssAI RCCGGY 3 cut(s) 143, 1469, 2073
BssECI CCNNGG 4 cut(s) 34, 1775, 1812, 1914
BssMI GATC 6 cut(s) 469, 635, 823, 1150, 1270, 1954
BssNI GRCGYC 3 cut(s) 117, 743, 1521
BssT1I CCWWGG 1 cut(s) 1914
Bst2UI CCWGG 4 cut(s) 172, 1543, 1699, 1777
Bst6I CTCTTC 2 cut(s) 505, 616
BstACI GRCGYC 3 cut(s) 117, 743, 1521
BstAPI GCANNNNNTGC 1 cut(s) 779
BstBAI YACGTR 1 cut(s) 2128
BstC8I GCNNGC 5 cut(s) 135, 145, 433, 600, 973
BstDEI CTNAG 8 cut(s) 303, 543, 606, 789, 1038, 1275, 1788, 2029
BstDSI CCRYGG 3 cut(s) 34, 1812, 1914
BstEII GGTNACC 1 cut(s) 2069
BstF5I GGATG 7 cut(s) 241, 433, 1024, 1538, 1694, 1984, 2166
BstFNI CGCG 2 cut(s) 20, 1814
BstKTI GATC 6 cut(s) 472, 638, 826, 1153, 1273, 1957
BstMAI GTCTC 5 cut(s) 221, 964, 1201, 1891, 2032
BstMBI GATC 6 cut(s) 469, 635, 823, 1150, 1270, 1954
BstMWI GCNNNNNNNGC 5 cut(s) 455, 749, 779, 1520, 1730
BstNI CCWGG 4 cut(s) 172, 1543, 1699, 1777
BstNSI RCATGY 2 cut(s) 592, 602
BstPI GGTNACC 1 cut(s) 2069
BstSCI CCNGG 4 cut(s) 170, 1541, 1697, 1775
BstSFI CTRYAG 2 cut(s) 1293, 1989
BstUI CGCG 2 cut(s) 20, 1814
BstV1I GCAGC 4 cut(s) 505, 589, 1949, 2026
BstV2I GAAGAC 1 cut(s) 284
BstX2I RGATCY 3 cut(s) 823, 1150, 1270
BstXI CCANNNNNNTGG 1 cut(s) 1831
BstYI RGATCY 3 cut(s) 823, 1150, 1270
BsuI GTATCC 1 cut(s) 709
BsuRI GGCC 1 cut(s) 752
BtgI CCRYGG 3 cut(s) 34, 1812, 1914
BtsCI GGATG 7 cut(s) 241, 433, 1024, 1538, 1694, 1984, 2166
BtsIMutI CAGTG 4 cut(s) 340, 939, 1065, 1836
Cac8I GCNNGC 5 cut(s) 135, 145, 433, 600, 973
CaiI CAGNNNCTG 2 cut(s) 1154, 1274
Cfr10I RCCGGY 3 cut(s) 143, 1469, 2073
Cfr13I GGNCC 2 cut(s) 398, 1884
Cfr42I CCGCGG 1 cut(s) 1815
CseI GACGC 2 cut(s) 732, 1529
Csp6I GTAC 3 cut(s) 408, 1056, 2108
CspAI ACCGGT 1 cut(s) 2073
CspCI CAANNNNNGTGG 6 cut(s) 1041, 1076, 1278, 1313, 1456, 1491
CviAII CATG 6 cut(s) 488, 515, 589, 599, 1915, 2188
CviQI GTAC 3 cut(s) 408, 1056, 2108
DdeI CTNAG 8 cut(s) 303, 543, 606, 789, 1038, 1275, 1788, 2029
DpnI GATC 6 cut(s) 471, 637, 825, 1152, 1272, 1956
DpnII GATC 6 cut(s) 469, 635, 823, 1150, 1270, 1954
Eam1104I CTCTTC 2 cut(s) 505, 616
EarI CTCTTC 2 cut(s) 505, 616
EciI GGCGGA 1 cut(s) 1942
Eco130I CCWWGG 1 cut(s) 1914
Eco31I GGTCTC 1 cut(s) 2032
Eco47I GGWCC 2 cut(s) 398, 1884
Eco57I CTGAAG 3 cut(s) 525, 1131, 1251
Eco72I CACGTG 1 cut(s) 2128
Eco91I GGTNACC 1 cut(s) 2069
EcoO65I GGTNACC 1 cut(s) 2069
EcoRI GAATTC 2 cut(s) 1919, 1971
EcoRII CCWGG 4 cut(s) 170, 1541, 1697, 1775
EcoT14I CCWWGG 1 cut(s) 1914
ErhI CCWWGG 1 cut(s) 1914
Esp3I CGTCTC 1 cut(s) 221
FaeI CATG 6 cut(s) 491, 518, 592, 602, 1918, 2191
FalI AAGNNNNNCTT 4 cut(s) 820, 852, 1123, 1155
FaqI GGGAC 5 cut(s) 1006, 1243, 1301, 1363, 1500
FatI CATG 6 cut(s) 487, 514, 588, 598, 1914, 2187
FauI CCCGC 1 cut(s) 1409
FblI GTMKAC 1 cut(s) 661
Fnu4HI GCNGC 7 cut(s) 18, 40, 494, 603, 1812, 1938, 2015
FokI GGATG 7 cut(s) 248, 440, 1011, 1525, 1681, 1991, 2173
Fsp4HI GCNGC 7 cut(s) 18, 40, 494, 603, 1812, 1938, 2015
FspBI CTAG 6 cut(s) 134, 381, 735, 1436, 1451, 1554
GluI GCNGC 7 cut(s) 18, 40, 494, 603, 1812, 1938, 2015
GsaI CCCAGC 1 cut(s) 1384
GsuI CTGGAG 5 cut(s) 245, 411, 816, 1812, 1845
HaeIII GGCC 1 cut(s) 752
HapII CCGG 4 cut(s) 144, 1190, 1470, 2074
HgaI GACGC 2 cut(s) 732, 1529
Hin1I GRCGYC 3 cut(s) 117, 743, 1521
Hin1II CATG 6 cut(s) 491, 518, 592, 602, 1918, 2191
HincII GTYRAC 1 cut(s) 1519
HindII GTYRAC 1 cut(s) 1519
HpaII CCGG 4 cut(s) 144, 1190, 1470, 2074
HphI GGTGA 2 cut(s) 653, 854
Hpy166II GTNNAC 7 cut(s) 34, 662, 808, 845, 1100, 1519, 2183
Hpy8I GTNNAC 7 cut(s) 34, 662, 808, 845, 1100, 1519, 2183
Hpy99I CGWCG 2 cut(s) 122, 143
HpyCH4IV ACGT 3 cut(s) 117, 1422, 2127
HpyCH4V TGCA 7 cut(s) 85, 191, 431, 463, 782, 1733, 2014
HpyF10VI GCNNNNNNNGC 5 cut(s) 455, 749, 779, 1520, 1730
HpyF3I CTNAG 8 cut(s) 303, 543, 606, 789, 1038, 1275, 1788, 2029
HpySE526I ACGT 3 cut(s) 117, 1422, 2127
Hsp92I GRCGYC 3 cut(s) 117, 743, 1521
Hsp92II CATG 6 cut(s) 491, 518, 592, 602, 1918, 2191
KroI GCCGGC 1 cut(s) 143
KroNI GCCGGC 1 cut(s) 145
KspI CCGCGG 1 cut(s) 1815
Kzo9I GATC 6 cut(s) 469, 635, 823, 1150, 1270, 1954
LguI GCTCTTC 1 cut(s) 616
LmnI GCTCC 4 cut(s) 62, 392, 454, 770
Lsp1109I GCAGC 4 cut(s) 505, 589, 1949, 2026
LweI GCATC 7 cut(s) 249, 418, 695, 782, 1588, 1744, 1798
MaeI CTAG 6 cut(s) 134, 381, 735, 1436, 1451, 1554
MaeII ACGT 3 cut(s) 117, 1422, 2127
MaeIII GTNAC 4 cut(s) 148, 1958, 1993, 2069
MalI GATC 6 cut(s) 471, 637, 825, 1152, 1272, 1956
MboI GATC 6 cut(s) 469, 635, 823, 1150, 1270, 1954
MfeI CAATTG 1 cut(s) 1077
MflI RGATCY 3 cut(s) 823, 1150, 1270
MmeI TCCRAC 7 cut(s) 100, 476, 1483, 1561, 1639, 1717, 2058
MreI CGCCGGCG 1 cut(s) 143
MroNI GCCGGC 1 cut(s) 143
MseI TTAA 1 cut(s) 872
MslI CAYNNNNRTG 1 cut(s) 1829
MspA1I CMGCKG 2 cut(s) 1416, 1814
MspI CCGG 4 cut(s) 144, 1190, 1470, 2074
MspR9I CCNGG 4 cut(s) 172, 1543, 1699, 1777
MunI CAATTG 1 cut(s) 1077
MvaI CCWGG 4 cut(s) 172, 1543, 1699, 1777
MvnI CGCG 2 cut(s) 20, 1814
MwoI GCNNNNNNNGC 5 cut(s) 455, 749, 779, 1520, 1730
NaeI GCCGGC 1 cut(s) 145
NcoI CCATGG 1 cut(s) 1914
NdeII GATC 6 cut(s) 469, 635, 823, 1150, 1270, 1954
NgoMIV GCCGGC 1 cut(s) 143
NheI GCTAGC 1 cut(s) 133
NlaIII CATG 6 cut(s) 491, 518, 592, 602, 1918, 2191
NlaIV GGNNCC 2 cut(s) 58, 1464
NmuCI GTSAC 1 cut(s) 148
NspI RCATGY 2 cut(s) 592, 602
OliI CACNNNNGTG 1 cut(s) 1829
PaeI GCATGC 1 cut(s) 602
PciSI GCTCTTC 1 cut(s) 616
PdiI GCCGGC 1 cut(s) 145
PfoI TCCNGGA 2 cut(s) 1541, 1697
PinAI ACCGGT 1 cut(s) 2073
PkrI GCNGC 7 cut(s) 19, 41, 495, 604, 1813, 1939, 2016
PmaCI CACGTG 1 cut(s) 2128
PmlI CACGTG 1 cut(s) 2128
Ppu21I YACGTR 1 cut(s) 2128
PsiI TTATAA 2 cut(s) 554, 999
Psp6I CCWGG 4 cut(s) 170, 1541, 1697, 1775
PspCI CACGTG 1 cut(s) 2128
PspEI GGTNACC 1 cut(s) 2069
PspFI CCCAGC 1 cut(s) 1380
PspGI CCWGG 4 cut(s) 170, 1541, 1697, 1775
PspN4I GGNNCC 2 cut(s) 58, 1464
PspPI GGNCC 2 cut(s) 398, 1884
PsrI GAACNNNNNNTAC 2 cut(s) 2054, 2086
PstNI CAGNNNCTG 2 cut(s) 1154, 1274
PsuI RGATCY 3 cut(s) 823, 1150, 1270
RsaI GTAC 3 cut(s) 409, 1057, 2109
RsaNI GTAC 3 cut(s) 408, 1056, 2108
RseI CAYNNNNRTG 1 cut(s) 1829
SacII CCGCGG 1 cut(s) 1815
SapI GCTCTTC 1 cut(s) 616
SaqAI TTAA 1 cut(s) 872
SatI GCNGC 7 cut(s) 18, 40, 494, 603, 1812, 1938, 2015
Sau3AI GATC 6 cut(s) 469, 635, 823, 1150, 1270, 1954
Sau96I GGNCC 2 cut(s) 398, 1884
ScaI AGTACT 1 cut(s) 409
ScrFI CCNGG 4 cut(s) 172, 1543, 1699, 1777
SfaNI GCATC 7 cut(s) 249, 418, 695, 782, 1588, 1744, 1798
SfcI CTRYAG 2 cut(s) 1293, 1989
Sfr303I CCGCGG 1 cut(s) 1815
SgrAI CRCCGGYG 1 cut(s) 143
SgrBI CCGCGG 1 cut(s) 1815
SinI GGWCC 2 cut(s) 398, 1884
SmiMI CAYNNNNRTG 1 cut(s) 1829
SmlI CTYRAG 2 cut(s) 1497, 2091
SmoI CTYRAG 2 cut(s) 1497, 2091
SphI GCATGC 1 cut(s) 602
SsiI CCGC 7 cut(s) 18, 39, 547, 1416, 1812, 1814, 1927
SspI AATATT 3 cut(s) 1573, 1651, 1729
SspMI CTAG 6 cut(s) 134, 381, 735, 1436, 1451, 1554
StyD4I CCNGG 4 cut(s) 170, 1541, 1697, 1775
StyI CCWWGG 1 cut(s) 1914
TaiI ACGT 3 cut(s) 120, 1425, 2130
TaqI TCGA 3 cut(s) 210, 285, 756
TaqII GACCGA 1 cut(s) 1998
TatI WGTACW 2 cut(s) 407, 1055
TauI GCSGC 3 cut(s) 20, 42, 1814
Tru1I TTAA 1 cut(s) 872
Tru9I TTAA 1 cut(s) 872
TscAI CASTG 4 cut(s) 347, 939, 1065, 1836
TseFI GTSAC 1 cut(s) 148
TseI GCWGC 4 cut(s) 493, 602, 1937, 2014
Tsp45I GTSAC 1 cut(s) 148
TspDTI ATGAA 2 cut(s) 253, 728
TspGWI ACGGA 2 cut(s) 288, 2173
TspRI CASTG 4 cut(s) 347, 939, 1065, 1836
VpaK11BI GGWCC 2 cut(s) 398, 1884
XapI RAATTY 4 cut(s) 628, 1873, 1919, 1971
XbaI TCTAGA 1 cut(s) 1450
XceI RCATGY 2 cut(s) 592, 602
XcmI CCANNNNNNNNNTGG 1 cut(s) 323
XmiI GTMKAC 1 cut(s) 661
XspI CTAG 6 cut(s) 134, 381, 735, 1436, 1451, 1554
ZraI GACGTC 1 cut(s) 118
ZrmI AGTACT 1 cut(s) 409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.