Rw3G012580

SANTA (SANT Associated)

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Forward (+)
12332873 .. 12338138
5266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G012580.1

Sequence Viewer

Length: 3018 bp
ATGGCTTCTCCTCCTTCCTCTACTCAAACCCTCGGCGACAGATCTCATTTCAAGCCAACCGTAACTCTCTCCGATTGGTGGTTGGTCAAATCCGAAGAGAACGACGAAAAAAGGAGACTTGCCGTCGCCGGCGTTTCTTCCGCCCCGCAAGAGATTCCCCGGAGAGTGTTTTACTCTGCGCCCATCAGTAAAAAATACGATGTGTTCACACTAGAGACTACTGATGGAGTGTGCATTATTCTTGATGGGATTATTAACAAGCAGCAGACTATTGCAAATGGGTTTCCTGATGAGGTTGCCAGGCGTTTTCAATTAGGCTTTTATGCAGGCTGGGAAAAAGGTGTTGCAGAGTTCTTGGGAGGAGACTCTAACACTACTGGTGTTTCTGAAAGAATATCTGATTTGGGTTCAGAAGGAAAAAAGAATTCCAGTCCAACTTCTGTGCATTTTTCTCAAGAAGAAACTCGAACTCCTTACGAGCATATTGGATCAACTTATTTTCAGTGGATTGGTAGATCAAGGAGTCCGGAAGGCAATCAGAAGAACCCAATGTCCGGATGTTCTATGAAGCATAAAAGTACTAAGATGCTTCCTTCATCAGATGCCTTTGAGAGTGTAGGAGGAGCAACAGGTGCAGCTGTTCAGTCAGGGGGGGAAATGAAAGAATCGGAGAGATGTCCAAGCAATTCTGCACGCAGAGTGACTAGATTTTTTTCAGAGTTTTTAAGGAGCAAATGGACGAACCACCAAATGGTTGACAATGGTTTGAACTCTGAAAAAAAGACAACGGACTCTCTTCTAACAGTCTCTGAAACTGTGAACAACTCTCAACAAAATGGTAAATGTGAAGTTGGAGGGAAAGGCGTGAAAAGTTCTAGTCCAACTTCTGTGCATCTTTCTCTAGAGGACGATTCACACGAGCAAGTCTCTTGTGAAGACATGTGTGATGCTGAATTTCCAAAACGGTTGTCTTCGAAGCTGTCCTTGAATAGCTCCATTGACGACTCAAAAATTGATGAGTTGGTTAACTATGCCACTGAGGAGGAAACAGAAAGAGAGGATTTTGGATCAACTGGTTTGCAGTGTATTGGGATACCGAAGACTCTAGAAGAAAATGAGAAAGGCCCAGTATCCGGATGCTCGATCAAGCATAATCATACAGAAATTAGTCCTTCAATAGATGTAGGTGTAGTAGCGTCAGGTGTAACCATTCCGTCTGCAGGGGAAATTGATATATCAAATATATATCCGAGAAATTCTGGAGGCAGAGTGTCCGGAGATTTGTCAATAATTACAAGGAGCAAAGGTAAGACGAAGCAAATTGTTGGCAACGGATTGAACTCTGAACAAAATACCATGGACTCTGTACCCGCAGTTGAAACAGTGAGCAGTGATTCAACAAATGTGGATTCTGAAGTAGGAGGGAGACATATGTTTGAATCTTTTCTCTCTTATTGTGAAATGGCTGAAGATGTACTAAATTCTAGTCTAACTCCTGTGCATTTTCCTCACGAAACTCCTTACGAGAAGGTCCATTGTGAAGATAGGCTTGATATTGAATATCCAAAACAGATTTCTACAAACCTGTCCTCAAATAGCACCATTGATGACTCAAAAATTGATGATCTGATGAACCGTGCTGCTGAAGTGGAATTGGACGCAGAGAATATTGGATTAACTGAATTTCAGTCTGTTGGGAGACCACAGGCTCGAGAAGAAAATGAGAAGAATCCAGCATCTGAGCCTGAAGTGGAATTGGATGCGGAGAATATTGGATTAACTGAGTTTCAGTCTGTTGGAAGACCAGAGACTCGAGAAGAAAATGAGAAGAGTCCAGCATCTGAGCCTGCGTCAGAAGCCCTTGAGATCCTAGATGGAGCAGTCGATGCAAATGCTCAGTCAGGTGGAAAAATGGATATATCAGAGAGATCCCCAAGCAAGTCTGCAGGCAGAGTGTCGCAACTGTTCTCAGGAATTATTAGGACAAAAGAGAAGAAGAAGCAAACGGTTAGCAATGGATTGAACTCTGAAACAAATACAATAGATTCTGTTCCAGCAGTTTCTGGCAGTGTGAGCAACCTGTTACAAAGTGATCGTTTTGAAACAGTAGGGAATGGGATGCCCCGTCCTTCAGATTCTGAACTTCAAGAACCAGTGGATGTGAATGTGGTAAGGAAACTAGATTTTGATTTTGTAGAAGATGATATGGAGCAGACTTCCAATGCAAAAGAGGGACAGGATTTTGGAAATGTTACAGCTCAAGTTGGAGAAGGAGAAAGTGGTGCTAAAGAAGAAAACAAATCCAGGAAGAGAAACATGAGACAAGTAACCGTTGATACACAACAAATTCATTTCATTCCGGAAGTGAACAAGAAAAAAAAGGTGGGGGTGAACAAGAAAAAGAACTCAACTCCTTCCACACTGGAGGTGAAGAAGAAAAAAGATGGAACTCCAGAGGTGATCAAGAGAAGGAAGGTATCTTCTTCCACTTTGGAGGTGAGCAAGAAAAAAAAGTTAACCCCTTTGACCCTAGAGGTGAACAACAAAAAAGAGGCATCTCTTTCCATTCCAAAGGTGAACACAAAGAAAAGAAAGGTATCTTCTTTGGACGGAAGCAAGAAAAGAACGTCAAGTCCTCCGACTCTGGAGGTGAACAGTAAAAAAGCGGTATCTCTTTCCACTTCGAAGGTAAACACAAAGAAAAGAAAGATATCTCCTTCCACATTGGAGGTGAGCAAGAAAAATAAGTCGAGTCCTTCGACTCTGGAGGTGAATAAGAAAAAAGAGGCATCTCTTTCCACTCCGAAGGTGAACACGAAGACGTCTATTATTTCTCCAGAATGTATGAGTGCCGGACGGTCAAGATCAGGGAGACTGCAGCTACCTCCCTTGGAATTCTGGCGCAATCAGTCAGCAGTTTATGACAAGGTTTCTTTGCTATCTATTTTCTTCCCTTGTGTGTGTGTGTGTGGTTTGATGACTTTTAACTCTTTAGCTTTAGCCTTTGTGACACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1005

Amino Acids

109.79

Weight (kDa)

5.96

Isoelectric Point (pI)

55.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SANTA PF09133 21 - 113 3e-22 SANTA (SANT Associated)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2825
AccB7I CCANNNNNTGG 1 cut(s) 751
AccIII TCCGGA 5 cut(s) 526, 554, 1133, 1274, 2359
AciI CCGC 5 cut(s) 141, 146, 1371, 1763, 2666
AclWI GGATC 4 cut(s) 496, 1075, 1861, 1923
AcsI RAATTY 7 cut(s) 424, 953, 1255, 1480, 1682, 2346, 2894
AcuI CTGAAG 5 cut(s) 1434, 1488, 1665, 1767, 2115
AcyI GRCGYC 1 cut(s) 2822
AfaI GTAC 3 cut(s) 580, 1368, 1476
AfiI CCNNNNNNNGG 5 cut(s) 78, 554, 751, 1133, 1220
AflIII ACRYGT 1 cut(s) 939
AhdI GACNNNNNGTC 1 cut(s) 122
AjnI CCWGG 2 cut(s) 299, 2303
AjuI GAANNNNNNNTTGG 2 cut(s) 1558, 1590
AloI GAACNNNNNNTCC 4 cut(s) 536, 568, 2617, 2649
AluBI AGCT 6 cut(s) 638, 979, 993, 2258, 2881, 2996
AluI AGCT 6 cut(s) 638, 979, 993, 2258, 2881, 2996
AlwI GGATC 4 cut(s) 496, 1075, 1861, 1923
AlwNI CAGNNNCTG 5 cut(s) 809, 1739, 1841, 2063, 2138
Ama87I CYCGRG 2 cut(s) 1710, 1812
Aor13HI TCCGGA 5 cut(s) 526, 554, 1133, 1274, 2359
AoxI GGCC 1 cut(s) 1123
ApeKI GCWGC 4 cut(s) 262, 635, 1640, 2878
ApoI RAATTY 7 cut(s) 424, 953, 1255, 1480, 1682, 2346, 2894
ArsI GACNNNNNNTTYG 4 cut(s) 953, 985, 1883, 1915
Asp700I GAANNNNTTC 1 cut(s) 1443
AspLEI GCGC 2 cut(s) 181, 2904
AspS9I GGNCC 2 cut(s) 1124, 1531
AsuC2I CCSGG 1 cut(s) 160
AsuII TTCGAA 2 cut(s) 974, 2684
AvaI CYCGRG 2 cut(s) 1710, 1812
AvaII GGWCC 1 cut(s) 1531
BauI CACGAG 1 cut(s) 917
BbsI GAAGAC 5 cut(s) 942, 963, 1106, 1807, 2825
BbvI GCAGC 4 cut(s) 274, 647, 1627, 2890
BccI CCATC 5 cut(s) 191, 218, 239, 1868, 2438
BceAI ACGGC 1 cut(s) 107
BcgI CGANNNNNNTGC 2 cut(s) 1874, 1908
BciT130I CCWGG 2 cut(s) 301, 2305
BciVI GTATCC 2 cut(s) 1086, 1141
BclI TGATCA 1 cut(s) 2460
BcnI CCSGG 1 cut(s) 160
BfaI CTAG 9 cut(s) 212, 705, 876, 902, 1106, 1485, 1871, 2180, 2531
BfmI CTRYAG 3 cut(s) 1218, 1944, 2876
BfuI GTATCC 2 cut(s) 1086, 1141
BglII AGATCT 1 cut(s) 41
BisI GCNGC 4 cut(s) 263, 636, 1641, 2879
BlsI GCNGC 4 cut(s) 264, 637, 1642, 2880
BmcAI AGTACT 1 cut(s) 580
Bme1390I CCNGG 3 cut(s) 160, 301, 2305
Bme18I GGWCC 1 cut(s) 1531
BmeRI GACNNNNNGTC 1 cut(s) 122
BmeT110I CYCGRG 2 cut(s) 1710, 1812
BmgT120I GGNCC 2 cut(s) 1124, 1531
BmrFI CCNGG 3 cut(s) 160, 301, 2305
BmrI ACTGGG 1 cut(s) 1121
BmuI ACTGGG 1 cut(s) 1121
BpiI GAAGAC 5 cut(s) 942, 963, 1106, 1807, 2825
BplI GAGNNNNNCTC 2 cut(s) 911, 943
BpmI CTGGAG 6 cut(s) 1281, 2436, 2444, 2666, 2786, 2820
Bpu14I TTCGAA 2 cut(s) 974, 2684
BpuEI CTTGAG 3 cut(s) 438, 1883, 2244
BpuMI CCSGG 1 cut(s) 160
BsaHI GRCGYC 1 cut(s) 2822
BsaI GGTCTC 1 cut(s) 1693
BsaJI CCNNGG 4 cut(s) 31, 158, 1356, 2889
BsaWI WCCGGW 5 cut(s) 526, 554, 1133, 1274, 2359
BsaXI ACNNNNNCTCC 6 cut(s) 454, 484, 1254, 1284, 1291, 1321
Bsc4I CCNNNNNNNGG 5 cut(s) 78, 554, 751, 1133, 1220
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 6 cut(s) 382, 429, 1078, 1127, 2153, 2427
Bse3DI GCAATG 1 cut(s) 2020
BseAI TCCGGA 5 cut(s) 526, 554, 1133, 1274, 2359
BseBI CCWGG 2 cut(s) 301, 2305
BseDI CCNNGG 4 cut(s) 31, 158, 1356, 2889
BseGI GGATG 5 cut(s) 563, 1142, 1765, 2124, 2164
BseLI CCNNNNNNNGG 5 cut(s) 78, 554, 751, 1133, 1220
BseMI GCAATG 1 cut(s) 2020
BseMII CTCAG 6 cut(s) 1029, 1731, 1773, 1833, 1910, 1983
BseNI ACTGG 6 cut(s) 382, 429, 1078, 1127, 2153, 2427
BseRI GAGGAG 3 cut(s) 375, 636, 1055
BseXI GCAGC 4 cut(s) 274, 647, 1627, 2890
BseYI CCCAGC 1 cut(s) 330
BsgI GTGCAG 2 cut(s) 654, 675
BshFI GGCC 1 cut(s) 1125
BsiHKCI CYCGRG 2 cut(s) 1710, 1812
BsiSI CCGG 8 cut(s) 129, 160, 527, 555, 1134, 1275, 2360, 2853
BslFI GGGAC 1 cut(s) 2247
BslI CCNNNNNNNGG 5 cut(s) 78, 554, 751, 1133, 1220
BsmFI GGGAC 1 cut(s) 2247
BsnI GGCC 1 cut(s) 1125
Bso31I GGTCTC 1 cut(s) 1693
BsoBI CYCGRG 2 cut(s) 1710, 1812
Bsp119I TTCGAA 2 cut(s) 974, 2684
Bsp13I TCCGGA 5 cut(s) 526, 554, 1133, 1274, 2359
Bsp19I CCATGG 1 cut(s) 1356
BspACI CCGC 5 cut(s) 141, 146, 1371, 1763, 2666
BspANI GGCC 1 cut(s) 1125
BspCNI CTCAG 6 cut(s) 1030, 1732, 1774, 1834, 1909, 1982
BspEI TCCGGA 5 cut(s) 526, 554, 1133, 1274, 2359
BspMAI CTGCAG 3 cut(s) 1222, 1948, 2880
BspPI GGATC 4 cut(s) 496, 1075, 1861, 1923
BspT104I TTCGAA 2 cut(s) 974, 2684
BspTNI GGTCTC 1 cut(s) 1693
BsrDI GCAATG 1 cut(s) 2020
BsrFI RCCGGY 1 cut(s) 128
BsrI ACTGG 6 cut(s) 382, 429, 1078, 1127, 2153, 2427
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 4 cut(s) 31, 158, 1356, 2889
BssNI GRCGYC 1 cut(s) 2822
BssSI CACGAG 1 cut(s) 917
BssT1I CCWWGG 2 cut(s) 1356, 2889
Bst2BI CACGAG 1 cut(s) 917
Bst2UI CCWGG 2 cut(s) 301, 2305
Bst6I CTCTTC 4 cut(s) 90, 801, 1823, 2303
BstACI GRCGYC 1 cut(s) 2822
BstAPI GCANNNNNTGC 2 cut(s) 632, 1886
BstBI TTCGAA 2 cut(s) 974, 2684
BstC8I GCNNGC 5 cut(s) 130, 328, 694, 1848, 1948
BstDEI CTNAG 7 cut(s) 582, 1038, 1740, 1782, 1842, 1896, 1969
BstDSI CCRYGG 1 cut(s) 1356
BstF5I GGATG 5 cut(s) 563, 1142, 1765, 2124, 2164
BstHHI GCGC 2 cut(s) 181, 2904
BstMWI GCNNNNNNNGC 4 cut(s) 632, 1856, 1886, 2073
BstNI CCWGG 2 cut(s) 301, 2305
BstNSI RCATGY 1 cut(s) 943
BstSCI CCNGG 3 cut(s) 158, 299, 2303
BstSFI CTRYAG 3 cut(s) 1218, 1944, 2876
BstV1I GCAGC 4 cut(s) 274, 647, 1627, 2890
BstV2I GAAGAC 5 cut(s) 942, 963, 1106, 1807, 2825
BstX2I RGATCY 3 cut(s) 41, 1866, 1928
BstYI RGATCY 3 cut(s) 41, 1866, 1928
BsuI GTATCC 2 cut(s) 1086, 1141
BsuRI GGCC 1 cut(s) 1125
BtgI CCRYGG 1 cut(s) 1356
BtsCI GGATG 5 cut(s) 563, 1142, 1765, 2124, 2164
BtsI GCAGTG 3 cut(s) 1088, 1396, 2074
BtsIMutI CAGTG 8 cut(s) 509, 1035, 1088, 1389, 1396, 2074, 2160, 2420
Cac8I GCNNGC 5 cut(s) 130, 328, 694, 1848, 1948
CaiI CAGNNNCTG 5 cut(s) 809, 1739, 1841, 2063, 2138
CfoI GCGC 2 cut(s) 181, 2904
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 2 cut(s) 1124, 1531
CseI GACGC 3 cut(s) 1185, 1667, 1839
Csp6I GTAC 3 cut(s) 579, 1367, 1475
CspCI CAANNNNNGTGG 2 cut(s) 1386, 1421
CviAII CATG 3 cut(s) 940, 1357, 2317
CviQI GTAC 3 cut(s) 579, 1367, 1475
DdeI CTNAG 7 cut(s) 582, 1038, 1740, 1782, 1842, 1896, 1969
DriI GACNNNNNGTC 1 cut(s) 122
Eam1104I CTCTTC 4 cut(s) 90, 801, 1823, 2303
Eam1105I GACNNNNNGTC 1 cut(s) 122
EarI CTCTTC 4 cut(s) 90, 801, 1823, 2303
EciI GGCGGA 1 cut(s) 130
Eco130I CCWWGG 2 cut(s) 1356, 2889
Eco31I GGTCTC 1 cut(s) 1693
Eco32I GATATC 1 cut(s) 2712
Eco47I GGWCC 1 cut(s) 1531
Eco57I CTGAAG 5 cut(s) 1434, 1488, 1665, 1767, 2115
Eco88I CYCGRG 2 cut(s) 1710, 1812
EcoRI GAATTC 2 cut(s) 424, 2894
EcoRII CCWGG 2 cut(s) 299, 2303
EcoRV GATATC 1 cut(s) 2712
EcoT14I CCWWGG 2 cut(s) 1356, 2889
ErhI CCWWGG 2 cut(s) 1356, 2889
FaeI CATG 3 cut(s) 943, 1360, 2320
FalI AAGNNNNNCTT 4 cut(s) 968, 1000, 1533, 1565
FaqI GGGAC 1 cut(s) 2247
FatI CATG 3 cut(s) 939, 1356, 2316
FauI CCCGC 2 cut(s) 153, 1378
FauNDI CATATG 1 cut(s) 1431
FbaI TGATCA 1 cut(s) 2460
Fnu4HI GCNGC 4 cut(s) 263, 636, 1641, 2879
FokI GGATG 5 cut(s) 570, 1149, 1772, 2131, 2171
Fsp4HI GCNGC 4 cut(s) 263, 636, 1641, 2879
FspBI CTAG 9 cut(s) 212, 705, 876, 902, 1106, 1485, 1871, 2180, 2531
GlaI GCGC 2 cut(s) 180, 2903
GluI GCNGC 4 cut(s) 263, 636, 1641, 2879
GsaI CCCAGC 1 cut(s) 334
GsuI CTGGAG 6 cut(s) 1281, 2436, 2444, 2666, 2786, 2820
HaeIII GGCC 1 cut(s) 1125
HapII CCGG 8 cut(s) 129, 160, 527, 555, 1134, 1275, 2360, 2853
HgaI GACGC 3 cut(s) 1185, 1667, 1839
HhaI GCGC 2 cut(s) 181, 2904
Hin1I GRCGYC 1 cut(s) 2822
Hin1II CATG 3 cut(s) 943, 1360, 2320
Hin6I GCGC 2 cut(s) 179, 2902
HinP1I GCGC 2 cut(s) 179, 2902
HincII GTYRAC 3 cut(s) 757, 1027, 2517
HindII GTYRAC 3 cut(s) 757, 1027, 2517
HpaI GTTAAC 2 cut(s) 1027, 2517
HpaII CCGG 8 cut(s) 129, 160, 527, 555, 1134, 1275, 2360, 2853
Hpy99I CGWCG 2 cut(s) 107, 128
HpyCH4IV ACGT 2 cut(s) 2627, 2822
HpyF10VI GCNNNNNNNGC 4 cut(s) 632, 1856, 1886, 2073
HpyF3I CTNAG 7 cut(s) 582, 1038, 1740, 1782, 1842, 1896, 1969
HpySE526I ACGT 2 cut(s) 2627, 2822
Hsp92I GRCGYC 1 cut(s) 2822
Hsp92II CATG 3 cut(s) 943, 1360, 2320
HspAI GCGC 2 cut(s) 179, 2902
Kpn2I TCCGGA 5 cut(s) 526, 554, 1133, 1274, 2359
KroI GCCGGC 1 cut(s) 128
KroNI GCCGGC 1 cut(s) 130
Ksp22I TGATCA 1 cut(s) 2460
KspAI GTTAAC 2 cut(s) 1027, 2517
LmnI GCTCC 6 cut(s) 623, 729, 998, 1299, 1877, 2209
Lsp1109I GCAGC 4 cut(s) 274, 647, 1627, 2890
MaeI CTAG 9 cut(s) 212, 705, 876, 902, 1106, 1485, 1871, 2180, 2531
MaeII ACGT 2 cut(s) 2627, 2822
MaeIII GTNAC 7 cut(s) 61, 700, 1204, 2082, 2251, 2326, 3007
MflI RGATCY 3 cut(s) 41, 1866, 1928
MmeI TCCRAC 6 cut(s) 458, 832, 905, 1777, 2245, 2663
MreI CGCCGGCG 1 cut(s) 128
MroI TCCGGA 5 cut(s) 526, 554, 1133, 1274, 2359
MroNI GCCGGC 1 cut(s) 128
MroXI GAANNNNTTC 1 cut(s) 1443
MseI TTAA 7 cut(s) 255, 725, 1026, 1676, 1778, 2516, 2985
MspA1I CMGCKG 1 cut(s) 638
MspI CCGG 8 cut(s) 129, 160, 527, 555, 1134, 1275, 2360, 2853
MspR9I CCNGG 3 cut(s) 160, 301, 2305
MvaI CCWGG 2 cut(s) 301, 2305
MwoI GCNNNNNNNGC 4 cut(s) 632, 1856, 1886, 2073
NaeI GCCGGC 1 cut(s) 130
NciI CCSGG 1 cut(s) 160
NcoI CCATGG 1 cut(s) 1356
NdeI CATATG 1 cut(s) 1431
NgoMIV GCCGGC 1 cut(s) 128
NlaIII CATG 3 cut(s) 943, 1360, 2320
NmeAIII GCCGAG 1 cut(s) 12
NmuCI GTSAC 2 cut(s) 700, 3007
NspI RCATGY 1 cut(s) 943
NspV TTCGAA 2 cut(s) 974, 2684
PaeR7I CTCGAG 2 cut(s) 1710, 1812
PciI ACATGT 1 cut(s) 939
PcsI WCGNNNNNNNCGW 2 cut(s) 915, 2756
PdiI GCCGGC 1 cut(s) 130
PdmI GAANNNNTTC 1 cut(s) 1443
PfeI GAWTC 9 cut(s) 154, 665, 911, 1394, 1409, 1439, 1729, 2045, 2135
PflMI CCANNNNNTGG 1 cut(s) 751
PfoI TCCNGGA 1 cut(s) 2303
PkrI GCNGC 4 cut(s) 264, 637, 1642, 2880
PscI ACATGT 1 cut(s) 939
Psp6I CCWGG 2 cut(s) 299, 2303
PspFI CCCAGC 1 cut(s) 330
PspGI CCWGG 2 cut(s) 299, 2303
PspPI GGNCC 2 cut(s) 1124, 1531
PstI CTGCAG 3 cut(s) 1222, 1948, 2880
PstNI CAGNNNCTG 5 cut(s) 809, 1739, 1841, 2063, 2138
PsuI RGATCY 3 cut(s) 41, 1866, 1928
PvuII CAGCTG 1 cut(s) 638
RsaI GTAC 3 cut(s) 580, 1368, 1476
RsaNI GTAC 3 cut(s) 579, 1367, 1475
SaqAI TTAA 7 cut(s) 255, 725, 1026, 1676, 1778, 2516, 2985
SatI GCNGC 4 cut(s) 263, 636, 1641, 2879
Sau96I GGNCC 2 cut(s) 1124, 1531
ScaI AGTACT 1 cut(s) 580
ScrFI CCNGG 3 cut(s) 160, 301, 2305
SfcI CTRYAG 3 cut(s) 1218, 1944, 2876
Sfr274I CTCGAG 2 cut(s) 1710, 1812
SfuI TTCGAA 2 cut(s) 974, 2684
SgrAI CRCCGGYG 1 cut(s) 128
SinI GGWCC 1 cut(s) 1531
SlaI CTCGAG 2 cut(s) 1710, 1812
SmlI CTYRAG 5 cut(s) 453, 1710, 1812, 1862, 2259
SmoI CTYRAG 5 cut(s) 453, 1710, 1812, 1862, 2259
SsiI CCGC 5 cut(s) 141, 146, 1371, 1763, 2666
SspI AATATT 2 cut(s) 1669, 1771
SspMI CTAG 9 cut(s) 212, 705, 876, 902, 1106, 1485, 1871, 2180, 2531
StyD4I CCNGG 3 cut(s) 158, 299, 2303
StyI CCWWGG 2 cut(s) 1356, 2889
TaiI ACGT 2 cut(s) 2630, 2825
TaqI TCGA 9 cut(s) 466, 974, 1142, 1711, 1813, 1884, 2684, 2750, 2759
TatI WGTACW 2 cut(s) 578, 1474
TfiI GAWTC 9 cut(s) 154, 665, 911, 1394, 1409, 1439, 1729, 2045, 2135
Tru1I TTAA 7 cut(s) 255, 725, 1026, 1676, 1778, 2516, 2985
Tru9I TTAA 7 cut(s) 255, 725, 1026, 1676, 1778, 2516, 2985
TscAI CASTG 8 cut(s) 509, 1042, 1088, 1389, 1396, 2074, 2160, 2427
TseFI GTSAC 2 cut(s) 700, 3007
TseI GCWGC 4 cut(s) 262, 635, 1640, 2878
Tsp45I GTSAC 2 cut(s) 700, 3007
TspDTI ATGAA 6 cut(s) 581, 585, 674, 1646, 2339, 2344
TspGWI ACGGA 4 cut(s) 803, 1203, 1347, 2625
TspRI CASTG 8 cut(s) 509, 1042, 1088, 1389, 1396, 2074, 2160, 2427
Van91I CCANNNNNTGG 1 cut(s) 751
VpaK11BI GGWCC 1 cut(s) 1531
XapI RAATTY 7 cut(s) 424, 953, 1255, 1480, 1682, 2346, 2894
XbaI TCTAGA 2 cut(s) 901, 1105
XceI RCATGY 1 cut(s) 943
XhoI CTCGAG 2 cut(s) 1710, 1812
XmnI GAANNNNTTC 1 cut(s) 1443
XspI CTAG 9 cut(s) 212, 705, 876, 902, 1106, 1485, 1871, 2180, 2531
ZraI GACGTC 1 cut(s) 2823
ZrmI AGTACT 1 cut(s) 580
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.