No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05936 AT3G05936 |
| malus_domestica | MD04G1183700.v1.1 |
| prunus_persica | Prupe.6G302200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0459041 |
| rosa_laevigata | RLG00000025124 |
| rosa_multiflora | Rmu_sc0004343.1_g000015 Rmu_sc0006910.1_g000003 Rmu_sc0033812.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00420560 |
| rosa_rugosa | Rorug03G0033100 |
| rosa_samantha | Rh3AG091000 Rh3BG093900 Rh3CG094500 Rh3DG094500 |
| rosa_wichuraiana | Rw3G007800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 294 |
| AccII | CGCG | 1 cut(s) | 163 |
| AcuI | CTGAAG | 1 cut(s) | 203 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 294 |
| AjnI | CCWGG | 1 cut(s) | 103 |
| AluBI | AGCT | 6 cut(s) | 52, 63, 73, 175, 266, 333 |
| AluI | AGCT | 6 cut(s) | 52, 63, 73, 175, 266, 333 |
| AoxI | GGCC | 1 cut(s) | 101 |
| ApeKI | GCWGC | 3 cut(s) | 333, 336, 351 |
| AsuHPI | GGTGA | 1 cut(s) | 133 |
| BbvI | GCAGC | 3 cut(s) | 320, 348, 363 |
| BccI | CCATC | 1 cut(s) | 254 |
| BciT130I | CCWGG | 1 cut(s) | 105 |
| BfmI | CTRYAG | 1 cut(s) | 334 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 109 |
| BisI | GCNGC | 3 cut(s) | 334, 337, 352 |
| BlsI | GCNGC | 3 cut(s) | 335, 338, 353 |
| Bme1390I | CCNGG | 1 cut(s) | 105 |
| BmrFI | CCNGG | 1 cut(s) | 105 |
| BmsI | GCATC | 3 cut(s) | 26, 348, 374 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 294 |
| Bse1I | ACTGG | 1 cut(s) | 305 |
| Bse3DI | GCAATG | 1 cut(s) | 91 |
| BseBI | CCWGG | 1 cut(s) | 105 |
| BseGI | GGATG | 2 cut(s) | 41, 316 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 294 |
| BseMI | GCAATG | 1 cut(s) | 91 |
| BseNI | ACTGG | 1 cut(s) | 305 |
| BseXI | GCAGC | 3 cut(s) | 320, 348, 363 |
| BseYI | CCCAGC | 1 cut(s) | 31 |
| Bsh1236I | CGCG | 1 cut(s) | 163 |
| BshFI | GGCC | 1 cut(s) | 103 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 294 |
| BsnI | GGCC | 1 cut(s) | 103 |
| BspANI | GGCC | 1 cut(s) | 103 |
| BspFNI | CGCG | 1 cut(s) | 163 |
| BspMAI | CTGCAG | 1 cut(s) | 338 |
| BsrDI | GCAATG | 1 cut(s) | 91 |
| BsrI | ACTGG | 1 cut(s) | 305 |
| Bst2UI | CCWGG | 1 cut(s) | 105 |
| Bst4CI | ACNGT | 2 cut(s) | 241, 380 |
| BstC8I | GCNNGC | 2 cut(s) | 215, 219 |
| BstF5I | GGATG | 2 cut(s) | 41, 316 |
| BstFNI | CGCG | 1 cut(s) | 163 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 109 |
| BstNI | CCWGG | 1 cut(s) | 105 |
| BstSCI | CCNGG | 1 cut(s) | 103 |
| BstSFI | CTRYAG | 1 cut(s) | 334 |
| BstUI | CGCG | 1 cut(s) | 163 |
| BstV1I | GCAGC | 3 cut(s) | 320, 348, 363 |
| BsuRI | GGCC | 1 cut(s) | 103 |
| BtsCI | GGATG | 2 cut(s) | 41, 316 |
| BtsI | GCAGTG | 1 cut(s) | 238 |
| BtsIMutI | CAGTG | 2 cut(s) | 237, 238 |
| Cac8I | GCNNGC | 2 cut(s) | 215, 219 |
| Eco57I | CTGAAG | 1 cut(s) | 203 |
| EcoRII | CCWGG | 1 cut(s) | 103 |
| FaiI | YATR | 4 cut(s) | 45, 66, 205, 229 |
| Fnu4HI | GCNGC | 3 cut(s) | 334, 337, 352 |
| FokI | GGATG | 2 cut(s) | 48, 303 |
| Fsp4HI | GCNGC | 3 cut(s) | 334, 337, 352 |
| GluI | GCNGC | 3 cut(s) | 334, 337, 352 |
| GsaI | CCCAGC | 1 cut(s) | 35 |
| HaeIII | GGCC | 1 cut(s) | 103 |
| HindIII | AAGCTT | 1 cut(s) | 173 |
| HphI | GGTGA | 1 cut(s) | 133 |
| Hpy166II | GTNNAC | 1 cut(s) | 244 |
| Hpy188I | TCNGA | 2 cut(s) | 171, 183 |
| Hpy8I | GTNNAC | 1 cut(s) | 244 |
| HpyAV | CCTTC | 6 cut(s) | 21, 85, 102, 132, 247, 330 |
| HpyCH4III | ACNGT | 2 cut(s) | 241, 380 |
| HpyCH4V | TGCA | 6 cut(s) | 39, 221, 231, 336, 351, 365 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 109 |
| LmnI | GCTCC | 2 cut(s) | 263, 330 |
| LpnPI | CCDG | 5 cut(s) | 17, 90, 117, 199, 318 |
| Lsp1109I | GCAGC | 3 cut(s) | 320, 348, 363 |
| LweI | GCATC | 3 cut(s) | 26, 348, 374 |
| MaeIII | GTNAC | 1 cut(s) | 233 |
| MboII | GAAGA | 3 cut(s) | 136, 196, 274 |
| MluCI | AATT | 2 cut(s) | 15, 369 |
| MmeI | TCCRAC | 1 cut(s) | 296 |
| MspR9I | CCNGG | 1 cut(s) | 105 |
| MvaI | CCWGG | 1 cut(s) | 105 |
| MvnI | CGCG | 1 cut(s) | 163 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 109 |
| NmuCI | GTSAC | 1 cut(s) | 233 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 160 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 294 |
| PkrI | GCNGC | 3 cut(s) | 335, 338, 353 |
| Psp6I | CCWGG | 1 cut(s) | 103 |
| PspFI | CCCAGC | 1 cut(s) | 31 |
| PspGI | CCWGG | 1 cut(s) | 103 |
| PstI | CTGCAG | 1 cut(s) | 338 |
| SatI | GCNGC | 3 cut(s) | 334, 337, 352 |
| ScrFI | CCNGG | 1 cut(s) | 105 |
| SetI | ASST | 8 cut(s) | 54, 65, 75, 96, 177, 258, 268, 335 |
| SfaNI | GCATC | 3 cut(s) | 26, 348, 374 |
| SfcI | CTRYAG | 1 cut(s) | 334 |
| Sse9I | AATT | 2 cut(s) | 15, 369 |
| SspI | AATATT | 2 cut(s) | 347, 361 |
| StyD4I | CCNGG | 1 cut(s) | 103 |
| TaaI | ACNGT | 2 cut(s) | 241, 380 |
| TasI | AATT | 2 cut(s) | 15, 369 |
| TscAI | CASTG | 2 cut(s) | 238, 244 |
| TseFI | GTSAC | 1 cut(s) | 233 |
| TseI | GCWGC | 3 cut(s) | 333, 336, 351 |
| Tsp45I | GTSAC | 1 cut(s) | 233 |
| TspDTI | ATGAA | 4 cut(s) | 60, 81, 146, 266 |
| TspRI | CASTG | 2 cut(s) | 238, 244 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 294 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 17 |