Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0008971

Physical Location & Seq

Genomic Coordinates Reverse (-)

1849689 .. 1860250

Gene Structure 10562 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1008600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGGCTGTGGGGAAGTATTCCCGAGTTGATGGAAGGAAGTCGTGGAATTGCTGTTCAACGACTAGTCTGGTTGTTTTTGTTGCGTTTTGTTTAATCGGGGTCTGGATGTTGATGTCAACAGTTGCTCCGATTCAGAATCAAGGGTCATCGTCTGAGGAGACTGTGGATGAGGTAAAACGGCAAACGATAATTGATAAAAATTCGAAGCAATTCGAAGACAGTTTGGGGGAACTCTCAGAAACTGTAACAAAAGAGGATGAAAATGGGAGTGATTTGCAGAGTGAAAGTCATTCGGATATTAAGAATGACCAAAATGTTGAGGATGGGTCTGTGAATACAACGGAAGAAAAACAGGAAGAATTGGTTTCAAAGGAGGGATCTGAGGAGAAGACTGAGCCAGAAAGTGACAATGGTGGTGAGGGAAATCAGCAAGAGAAGCTTGTGGAAGAGAGATCTGATGAGAAACCTGAGACCAAAGAGGAAACAAAGATGGAGGAAATAAATGATCAAGAAGCTGGTTCAGGAGATGGGGAGTCCAATTCCAAAGCTGGAAAAACAGAGGTGGAGGAGAGTTCAGGTACAAAGACATCTGGAGAGGAAACTTCTGATGAAGTAAAGCAGGAAGAGGAAGCTACTGGTCAGAATGAGAAGGAAGAGGTTGAGAAAGATCAGGAAGAAGGTGATACCAGTAGTAAAACAGAAAGCCAGGAAACTACAGCTGAAACTGAGCAAGGGTCGACTGAAGTCATAGAGTCGCAGAATGAAAAAGAAACACAACAATCTTTGTCAGATGAACATAAGAGTGGGCATGATGAACGGAAGTGGAAAGTCTGTGATGTCACGGCTGGGCCAGACTACATCCCTTGTCTTGACAATTGGGGATCTATCAAGAAGCTTCCAAACACAGGCCACTATGAACATCGAGAGAGACACTGCCCTGATGAAGCCTCTACCTGTCTTGTTCCCCTACCAGAAGGATATAAACGGCCCATTCAGTGGCCCACAAGCAGGGAAAAGATATGGTACCACAATGTCCCTCACACAAAGCTTGCAGCAGTTAAAGGGCACCAAAATTGGGTTAAAGTTACTGGTGAATACCTCACATTTCCTGGTGGCGGAACTCAGTTTAAGAATGGCGCTCTTCATTACATTGATTTTATTCAAAAATCTCTTCCTGATATTGCATGGGGTAAAAGAAGCCGTGTGATATTGGATGTTGGGTGTGGTGTAGCTAGCTTTGGAGGATTTCTATTTGAAAGAGATGTTCTTGCTATGTCATTTGCTCCCAAGGATGAGCACGAAGCCCAAGTACAATTTGCACTAGAACGGGGAATCCCTGCCATATCAGCTGTTATGGGTACCAAAAGACTACCCTATCCAAGTTCTGTGTTTGATCTTATTCACTGTGCACGGTGTAGAGTACCTTGGCATATTGAAGGTGGTAAACTGCTCCTGGAGCTTAATCGTGTCTTGCGACCTGGTGGTTACTTTGTCTGGTCTGCTACTCCGGTTTACCAAAAGCTTCCTGACGATGTTGCCATTTGGAAAGCTATGTCGAAATTAACAAAGTCAATGTGCTGGGATCTAGTAGTGATTAAAAACGACACACTCAATGGAGTGGCTGCTGCGATATATAGAAAACCCTCTACCAATGAGTGCTACAATGAACGACCACACAATGACCCTCCTCTCTGCAGTGAATCTGATGATCCAAATGCTGGCTGGAATGTAACATTGGAGGCATGCATGCTCAAAGTCCCGGAGGGTGTATTAGACCGTGGATCTCAGTGGCCTCTGCAATGGCCATCAAGGTTGCAGAAACCACCATACTGGTTAAAGTCTCAGCTTGATGTTAATGGGAAATCCGCCCCAGAAGATTTCGTTTCTGACTACAAGCATTGGAAAAAAGTTGTTTCTGAGACCTATTTGAATGGGATGGGAATCAACTGGTCCACTGTAAGGAATGTCATGGACATGAGAGCTGTATATGGGGGGTTTGCTGCAGCACTAAAAGACTTGAAAGTATGGGTTATGAATGTAGTCCCAGTTGACTCTCGTGACACACTTCCAATAATCTATGAGCGGGGTTTAATTGGGATATATCATGATTGGTGTGAATCGTTCAGTACCTACCCCAGATCTTATGATCTTTTACACGCAGATCATCTATTCTCCGTCCTTAAGAAAAGATGCAGCTTAGTGGCAGCGATTGCAGAAGTTGATAGGATACTGAGGCCAGAAGGGAAACTAATTGTATGGGACAATGCTGAAACCTTAAATGAGATTGAGAGTCTGGCTAAATCTCTGCAATGGAACATCCGATTTACTTACTCGAAAGACAATGAGGGTTTGCTGTGCATTCAGAAGACGTTTTGGCGTCCTGCAGAGAAGGAGAAAATTTTGTCAGCCATTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005911 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009506 GO:0012505 GO:0016740 GO:0016741 GO:0030054 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

806

Amino Acids

90.58

Weight (kDa)

4.98

Isoelectric Point (pI)

45.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	285 - 789	3.9e-228	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	404 - 498	7.2e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008971)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29470 AT1G29470 AT2G34300 AT2G34300 AT2G34300
fragaria_vesca	FvH4_2g00990 FvH4_2g00990
malus_domestica	MD05G1008600.v1.1 MD10G1006100.v1.1
prunus_persica	Prupe.8G010300_v2.0.a1
pyrus_communis	pycom10g00450
rosa_chinensis	RchiOBHm_Chr6g0251511
rosa_laevigata	RLG00000015461
rosa_multiflora	Rmu_sc0001382.1_g000020 Rmu_sc0040206.1_g000001
rosa_roxburghii	Rroxscaffold_7G00216610
rosa_rugosa	Rorug05G0502800 Rorug05G0502900
rosa_samantha	Rh6AG011600 Rh6BG010400 Rh6CG009000
rosa_wichuraiana	Rw6G001340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	1023, 1358
AccB1I	GGYRCC	3 cut(s)	1023, 1065, 1358
AccB7I	CCANNNNNTGG	2 cut(s)	996, 1718
AccBSI	CCGCTC	1 cut(s)	2083
AccI	GTMKAC	1 cut(s)	737
AciI	CCGC	3 cut(s)	1116, 1866, 2083
AclWI	GGATC	5 cut(s)	385, 889, 1590, 1703, 1789
AcoI	YGGCCR	1 cut(s)	1802
AcsI	RAATTY	2 cut(s)	199, 2397
AcuI	CTGAAG	1 cut(s)	762
AcyI	GRCGYC	1 cut(s)	2377
AfaI	GTAC	6 cut(s)	580, 1025, 1311, 1360, 1422, 2128
AfiI	CCNNNNNNNGG	7 cut(s)	905, 996, 1008, 1075, 1115, 1718, 1959
AflII	CTTAAG	1 cut(s)	2180
AgsI	TTSAA	7 cut(s)	57, 369, 1163, 1256, 1436, 1930, 2020
AhlI	ACTAGT	1 cut(s)	62
AjnI	CCWGG	4 cut(s)	705, 1108, 1452, 1477
AjuI	GAANNNNNNNTTGG	2 cut(s)	1718, 1750
AloI	GAACNNNNNNTCC	4 cut(s)	37, 69, 1317, 1349
Alw21I	GWGCWC	2 cut(s)	1299, 1411
Alw26I	GTCTC	5 cut(s)	152, 464, 922, 1845, 1913
Alw44I	GTGCAC	1 cut(s)	1407
AlwI	GGATC	5 cut(s)	385, 889, 1590, 1703, 1789
AlwNI	CAGNNNCTG	1 cut(s)	242
Ama87I	CYCGRG	1 cut(s)	21
AoxI	GGCC	7 cut(s)	848, 907, 986, 998, 1790, 1802, 2234
ApaLI	GTGCAC	1 cut(s)	1407
ApeKI	GCWGC	7 cut(s)	1052, 1622, 1625, 2000, 2003, 2193, 2204
ApoI	RAATTY	2 cut(s)	199, 2397
Asp700I	GAANNNNTTC	1 cut(s)	209
Asp718I	GGTACC	2 cut(s)	1023, 1358
AspLEI	GCGC	1 cut(s)	1139
AspS9I	GGNCC	4 cut(s)	848, 987, 999, 1950
AsuC2I	CCSGG	1 cut(s)	1760
AsuHPI	GGTGA	3 cut(s)	428, 692, 1103
AsuII	TTCGAA	2 cut(s)	203, 213
AsuNHI	GCTAGC	1 cut(s)	1232
AvaI	CYCGRG	1 cut(s)	21
AvaII	GGWCC	1 cut(s)	1950
BaeGI	GKGCMC	2 cut(s)	1068, 1411
BalI	TGGCCA	1 cut(s)	1804
BanI	GGYRCC	3 cut(s)	1023, 1065, 1358
BarI	GAAGNNNNNNTAC	2 cut(s)	1293, 1325
BauI	CACGAG	1 cut(s)	2055
BbsI	GAAGAC	3 cut(s)	222, 395, 2372
Bbv12I	GWGCWC	2 cut(s)	1299, 1411
BbvI	GCAGC	7 cut(s)	1064, 1609, 1612, 1987, 2015, 2205, 2216
BccI	CCATC	6 cut(s)	23, 317, 484, 521, 1813, 1930
BceAI	ACGGC	4 cut(s)	194, 858, 1001, 1185
BciT130I	CCWGG	4 cut(s)	707, 1110, 1454, 1479
BciVI	GTATCC	1 cut(s)	2220
BclI	TGATCA	1 cut(s)	505
BcnI	CCSGG	1 cut(s)	1760
BcoDI	GTCTC	5 cut(s)	152, 464, 922, 1845, 1913
BcuI	ACTAGT	1 cut(s)	62
BfaI	CTAG	4 cut(s)	63, 1233, 1322, 1586
BfmI	CTRYAG	4 cut(s)	714, 1693, 2001, 2382
BfoI	RGCGCY	1 cut(s)	1140
BfrI	CTTAAG	1 cut(s)	2180
BfuI	GTATCC	1 cut(s)	2220
BglII	AGATCT	2 cut(s)	452, 2138
BisI	GCNGC	7 cut(s)	1053, 1623, 1626, 2001, 2004, 2194, 2205
BlsI	GCNGC	7 cut(s)	1054, 1624, 1627, 2002, 2005, 2195, 2206
Bme1390I	CCNGG	5 cut(s)	707, 1110, 1454, 1479, 1760
Bme18I	GGWCC	1 cut(s)	1950
BmeT110I	CYCGRG	1 cut(s)	21
BmgT120I	GGNCC	4 cut(s)	848, 987, 999, 1950
BmiI	GGNNCC	3 cut(s)	1025, 1067, 1360
BmrFI	CCNGG	5 cut(s)	707, 1110, 1454, 1479, 1760
BmrI	ACTGGG	1 cut(s)	2039
BmsI	GCATC	1 cut(s)	2180
BmtI	GCTAGC	1 cut(s)	1236
BmuI	ACTGGG	1 cut(s)	2039
BoxI	GACNNNNGTC	1 cut(s)	743
BpiI	GAAGAC	3 cut(s)	222, 395, 2372
BpmI	CTGGAG	2 cut(s)	612, 1475
Bpu14I	TTCGAA	2 cut(s)	203, 213
BpuMI	CCSGG	1 cut(s)	1760
BsaBI	GATNNNNATC	1 cut(s)	1940
BsaHI	GRCGYC	1 cut(s)	2377
BsaI	GGTCTC	2 cut(s)	464, 1913
BsaJI	CCNNGG	3 cut(s)	1287, 1424, 1777
BsaWI	WCCGGW	1 cut(s)	1507
BsaXI	ACNNNNNCTCC	2 cut(s)	109, 139
Bsc4I	CCNNNNNNNGG	7 cut(s)	905, 996, 1008, 1075, 1115, 1718, 1959
Bse1I	ACTGG	6 cut(s)	640, 687, 1093, 1835, 1952, 2045
Bse3DI	GCAATG	3 cut(s)	1805, 2315, 2409
Bse8I	GATNNNNATC	1 cut(s)	1940
BseBI	CCWGG	4 cut(s)	707, 1110, 1454, 1479
BseDI	CCNNGG	3 cut(s)	1287, 1424, 1777
BseGI	GGATG	9 cut(s)	111, 172, 262, 328, 858, 1219, 1297, 1941, 2316
BseJI	GATNNNNATC	1 cut(s)	1940
BseLI	CCNNNNNNNGG	7 cut(s)	905, 996, 1008, 1075, 1115, 1718, 1959
BseMI	GCAATG	3 cut(s)	1805, 2315, 2409
BseNI	ACTGG	6 cut(s)	640, 687, 1093, 1835, 1952, 2045
BseRI	GAGGAG	4 cut(s)	170, 398, 581, 1677
BseSI	GKGCMC	2 cut(s)	1068, 1411
BseXI	GCAGC	7 cut(s)	1064, 1609, 1612, 1987, 2015, 2205, 2216
BseYI	CCCAGC	2 cut(s)	845, 1578
BshFI	GGCC	7 cut(s)	850, 909, 988, 1000, 1792, 1804, 2236
BshNI	GGYRCC	3 cut(s)	1023, 1065, 1358
BsiHKAI	GWGCWC	2 cut(s)	1299, 1411
BsiHKCI	CYCGRG	1 cut(s)	21
BsiSI	CCGG	2 cut(s)	1508, 1760
BslFI	GGGAC	4 cut(s)	1019, 1742, 2027, 2273
BslI	CCNNNNNNNGG	7 cut(s)	905, 996, 1008, 1075, 1115, 1718, 1959
BsmAI	GTCTC	5 cut(s)	152, 464, 922, 1845, 1913
BsmFI	GGGAC	4 cut(s)	1019, 1742, 2027, 2273
BsmI	GAATGC	1 cut(s)	2358
BsnI	GGCC	7 cut(s)	850, 909, 988, 1000, 1792, 1804, 2236
Bso31I	GGTCTC	2 cut(s)	464, 1913
BsoBI	CYCGRG	1 cut(s)	21
Bsp119I	TTCGAA	2 cut(s)	203, 213
Bsp1286I	GDGCHC	3 cut(s)	1068, 1299, 1411
BspACI	CCGC	3 cut(s)	1116, 1866, 2083
BspANI	GGCC	7 cut(s)	850, 909, 988, 1000, 1792, 1804, 2236
BspHI	TCATGA	1 cut(s)	2104
BspLI	GGNNCC	3 cut(s)	1025, 1067, 1360
BspMAI	CTGCAG	3 cut(s)	1697, 2005, 2386
BspOI	GCTAGC	1 cut(s)	1236
BspPI	GGATC	5 cut(s)	385, 889, 1590, 1703, 1789
BspQI	GCTCTTC	1 cut(s)	1146
BspT104I	TTCGAA	2 cut(s)	203, 213
BspT107I	GGYRCC	3 cut(s)	1023, 1065, 1358
BspTI	CTTAAG	1 cut(s)	2180
BspTNI	GGTCTC	2 cut(s)	464, 1913
BsrBI	CCGCTC	1 cut(s)	2083
BsrDI	GCAATG	3 cut(s)	1805, 2315, 2409
BsrI	ACTGG	6 cut(s)	640, 687, 1093, 1835, 1952, 2045
BssECI	CCNNGG	3 cut(s)	1287, 1424, 1777
BssNI	GRCGYC	1 cut(s)	2377
BssSI	CACGAG	1 cut(s)	2055
BssT1I	CCWWGG	2 cut(s)	1287, 1424
Bst2BI	CACGAG	1 cut(s)	2055
Bst2UI	CCWGG	4 cut(s)	707, 1110, 1454, 1479
Bst4CI	ACNGT	8 cut(s)	121, 163, 221, 244, 1406, 1413, 1778, 1957
Bst6I	CTCTTC	5 cut(s)	441, 618, 648, 1146, 1176
BstACI	GRCGYC	1 cut(s)	2377
BstAFI	CTTAAG	1 cut(s)	2180
BstAPI	GCANNNNNTGC	1 cut(s)	2210
BstBI	TTCGAA	2 cut(s)	203, 213
BstC8I	GCNNGC	5 cut(s)	1050, 1234, 1720, 1744, 1748
BstDSI	CCRYGG	1 cut(s)	1777
BstF5I	GGATG	9 cut(s)	111, 172, 262, 328, 858, 1219, 1297, 1941, 2316
BstH2I	RGCGCY	1 cut(s)	1140
BstHHI	GCGC	1 cut(s)	1139
BstMAI	GTCTC	5 cut(s)	152, 464, 922, 1845, 1913
BstMWI	GCNNNNNNNGC	4 cut(s)	436, 1346, 1456, 2210
BstNI	CCWGG	4 cut(s)	707, 1110, 1454, 1479
BstNSI	RCATGY	2 cut(s)	1746, 1750
BstPAI	GACNNNNGTC	1 cut(s)	743
BstSCI	CCNGG	5 cut(s)	705, 1108, 1452, 1477, 1758
BstSFI	CTRYAG	4 cut(s)	714, 1693, 2001, 2382
BstSLI	GKGCMC	2 cut(s)	1068, 1411
BstV1I	GCAGC	7 cut(s)	1064, 1609, 1612, 1987, 2015, 2205, 2216
BstV2I	GAAGAC	3 cut(s)	222, 395, 2372
BstX2I	RGATCY	6 cut(s)	377, 452, 881, 1582, 1781, 2138
BstXI	CCANNNNNNTGG	1 cut(s)	1830
BstYI	RGATCY	6 cut(s)	377, 452, 881, 1582, 1781, 2138
BsuI	GTATCC	1 cut(s)	2220
BsuRI	GGCC	7 cut(s)	850, 909, 988, 1000, 1792, 1804, 2236
BtgI	CCRYGG	1 cut(s)	1777
BtsCI	GGATG	9 cut(s)	111, 172, 262, 328, 858, 1219, 1297, 1941, 2316
BtsI	GCAGTG	2 cut(s)	931, 1702
BtsIMutI	CAGTG	6 cut(s)	931, 1001, 1402, 1702, 1793, 1953
Cac8I	GCNNGC	5 cut(s)	1050, 1234, 1720, 1744, 1748
CaiI	CAGNNNCTG	1 cut(s)	242
CciI	TCATGA	1 cut(s)	2104
CfoI	GCGC	1 cut(s)	1139
Cfr13I	GGNCC	4 cut(s)	848, 987, 999, 1950
CseI	GACGC	1 cut(s)	2366
CsiI	ACCWGGT	1 cut(s)	1477
Csp6I	GTAC	6 cut(s)	579, 1024, 1310, 1359, 1421, 2127
CviAII	CATG	7 cut(s)	809, 1185, 1743, 1747, 1969, 1975, 2105
CviQI	GTAC	6 cut(s)	579, 1024, 1310, 1359, 1421, 2127
EaeI	YGGCCR	1 cut(s)	1802
Eam1104I	CTCTTC	5 cut(s)	441, 618, 648, 1146, 1176
EarI	CTCTTC	5 cut(s)	441, 618, 648, 1146, 1176
EciI	GGCGGA	2 cut(s)	1131, 1855
Eco130I	CCWWGG	2 cut(s)	1287, 1424
Eco31I	GGTCTC	2 cut(s)	464, 1913
Eco47I	GGWCC	1 cut(s)	1950
Eco57I	CTGAAG	1 cut(s)	762
Eco88I	CYCGRG	1 cut(s)	21
EcoRII	CCWGG	4 cut(s)	705, 1108, 1452, 1477
EcoT14I	CCWWGG	2 cut(s)	1287, 1424
EcoT22I	ATGCAT	1 cut(s)	1748
ErhI	CCWWGG	2 cut(s)	1287, 1424
FaeI	CATG	7 cut(s)	812, 1188, 1746, 1750, 1972, 1978, 2108
FalI	AAGNNNNNCTT	2 cut(s)	423, 455
FaqI	GGGAC	4 cut(s)	1019, 1742, 2027, 2273
FatI	CATG	7 cut(s)	808, 1184, 1742, 1746, 1968, 1974, 2104
FauI	CCCGC	1 cut(s)	2076
FbaI	TGATCA	1 cut(s)	505
FblI	GTMKAC	1 cut(s)	737
Fnu4HI	GCNGC	7 cut(s)	1053, 1623, 1626, 2001, 2004, 2194, 2205
FokI	GGATG	9 cut(s)	118, 179, 269, 335, 845, 1226, 1304, 1948, 2303
Fsp4HI	GCNGC	7 cut(s)	1053, 1623, 1626, 2001, 2004, 2194, 2205
FspBI	CTAG	4 cut(s)	63, 1233, 1322, 1586
GlaI	GCGC	1 cut(s)	1138
GluI	GCNGC	7 cut(s)	1053, 1623, 1626, 2001, 2004, 2194, 2205
GsaI	CCCAGC	2 cut(s)	849, 1582
GsuI	CTGGAG	2 cut(s)	612, 1475
HaeII	RGCGCY	1 cut(s)	1140
HaeIII	GGCC	7 cut(s)	850, 909, 988, 1000, 1792, 1804, 2236
HapII	CCGG	2 cut(s)	1508, 1760
HgaI	GACGC	1 cut(s)	2366
HhaI	GCGC	1 cut(s)	1139
Hin1I	GRCGYC	1 cut(s)	2377
Hin1II	CATG	7 cut(s)	812, 1188, 1746, 1750, 1972, 1978, 2108
Hin6I	GCGC	1 cut(s)	1137
HinP1I	GCGC	1 cut(s)	1137
HincII	GTYRAC	3 cut(s)	117, 738, 2050
HindII	GTYRAC	3 cut(s)	117, 738, 2050
HindIII	AAGCTT	4 cut(s)	437, 893, 1046, 1520
HpaII	CCGG	2 cut(s)	1508, 1760
HphI	GGTGA	3 cut(s)	428, 692, 1103
Hpy166II	GTNNAC	7 cut(s)	117, 738, 1409, 1445, 1513, 1953, 2050
Hpy8I	GTNNAC	7 cut(s)	117, 738, 1409, 1445, 1513, 1953, 2050
HpyAV	CCTTC	7 cut(s)	27, 643, 671, 968, 1430, 2234, 2383
HpyCH4III	ACNGT	8 cut(s)	121, 163, 221, 244, 1406, 1413, 1778, 1957
HpyCH4IV	ACGT	1 cut(s)	2369
HpyF10VI	GCNNNNNNNGC	4 cut(s)	436, 1346, 1456, 2210
HpySE526I	ACGT	1 cut(s)	2369
Hsp92I	GRCGYC	1 cut(s)	2377
Hsp92II	CATG	7 cut(s)	812, 1188, 1746, 1750, 1972, 1978, 2108
HspAI	GCGC	1 cut(s)	1137
KpnI	GGTACC	2 cut(s)	1027, 1362
Ksp22I	TGATCA	1 cut(s)	505
LguI	GCTCTTC	1 cut(s)	1146
LmnI	GCTCC	4 cut(s)	130, 1288, 1455, 1456
Lsp1109I	GCAGC	7 cut(s)	1064, 1609, 1612, 1987, 2015, 2205, 2216
LweI	GCATC	1 cut(s)	2180
MabI	ACCWGGT	1 cut(s)	1477
MaeI	CTAG	4 cut(s)	63, 1233, 1322, 1586
MaeII	ACGT	1 cut(s)	2369
MaeIII	GTNAC	7 cut(s)	244, 404, 838, 1084, 1484, 1729, 2057
MbiI	CCGCTC	1 cut(s)	2083
MfeI	CAATTG	1 cut(s)	874
MflI	RGATCY	6 cut(s)	377, 452, 881, 1582, 1781, 2138
MhlI	GDGCHC	3 cut(s)	1068, 1299, 1411
MlsI	TGGCCA	1 cut(s)	1804
MluNI	TGGCCA	1 cut(s)	1804
MlyI	GAGTC	4 cut(s)	542, 761, 2045, 2299
Mox20I	TGGCCA	1 cut(s)	1804
Mph1103I	ATGCAT	1 cut(s)	1748
MroXI	GAANNNNTTC	1 cut(s)	209
MscI	TGGCCA	1 cut(s)	1804
MslI	CAYNNNNRTG	2 cut(s)	801, 1973
Msp20I	TGGCCA	1 cut(s)	1804
MspA1I	CMGCKG	2 cut(s)	719, 1349
MspCI	CTTAAG	1 cut(s)	2180
MspI	CCGG	2 cut(s)	1508, 1760
MspR9I	CCNGG	5 cut(s)	707, 1110, 1454, 1479, 1760
MunI	CAATTG	1 cut(s)	874
Mva1269I	GAATGC	1 cut(s)	2358
MvaI	CCWGG	4 cut(s)	707, 1110, 1454, 1479
MwoI	GCNNNNNNNGC	4 cut(s)	436, 1346, 1456, 2210
NciI	CCSGG	1 cut(s)	1760
NheI	GCTAGC	1 cut(s)	1232
NlaIII	CATG	7 cut(s)	812, 1188, 1746, 1750, 1972, 1978, 2108
NlaIV	GGNNCC	3 cut(s)	1025, 1067, 1360
NmuCI	GTSAC	3 cut(s)	404, 838, 2057
NsiI	ATGCAT	1 cut(s)	1748
NspI	RCATGY	2 cut(s)	1746, 1750
NspV	TTCGAA	2 cut(s)	203, 213
PaeI	GCATGC	2 cut(s)	1746, 1750
PagI	TCATGA	1 cut(s)	2104
PciSI	GCTCTTC	1 cut(s)	1146
PcsI	WCGNNNNNNNCGW	1 cut(s)	1471
PctI	GAATGC	1 cut(s)	2358
PdmI	GAANNNNTTC	1 cut(s)	209
PfeI	GAWTC	6 cut(s)	130, 136, 1332, 1700, 1941, 2117
PflMI	CCANNNNNTGG	2 cut(s)	996, 1718
PfoI	TCCNGGA	2 cut(s)	1452, 1758
PkrI	GCNGC	7 cut(s)	1054, 1624, 1627, 2002, 2005, 2195, 2206
PleI	GAGTC	4 cut(s)	541, 760, 2045, 2298
PpsI	GAGTC	4 cut(s)	541, 760, 2045, 2298
PshAI	GACNNNNGTC	1 cut(s)	743
Psp6I	CCWGG	4 cut(s)	705, 1108, 1452, 1477
PspFI	CCCAGC	2 cut(s)	845, 1578
PspGI	CCWGG	4 cut(s)	705, 1108, 1452, 1477
PspN4I	GGNNCC	3 cut(s)	1025, 1067, 1360
PspPI	GGNCC	4 cut(s)	848, 987, 999, 1950
PstI	CTGCAG	3 cut(s)	1697, 2005, 2386
PstNI	CAGNNNCTG	1 cut(s)	242
PsuI	RGATCY	6 cut(s)	377, 452, 881, 1582, 1781, 2138
PvuII	CAGCTG	2 cut(s)	719, 1349
RsaI	GTAC	6 cut(s)	580, 1025, 1311, 1360, 1422, 2128
RsaNI	GTAC	6 cut(s)	579, 1024, 1310, 1359, 1421, 2127
RseI	CAYNNNNRTG	2 cut(s)	801, 1973
SalI	GTCGAC	1 cut(s)	736
SapI	GCTCTTC	1 cut(s)	1146
SatI	GCNGC	7 cut(s)	1053, 1623, 1626, 2001, 2004, 2194, 2205
Sau96I	GGNCC	4 cut(s)	848, 987, 999, 1950
SchI	GAGTC	4 cut(s)	542, 761, 2045, 2299
ScrFI	CCNGG	5 cut(s)	707, 1110, 1454, 1479, 1760
SduI	GDGCHC	3 cut(s)	1068, 1299, 1411
SexAI	ACCWGGT	1 cut(s)	1477
SfaNI	GCATC	1 cut(s)	2180
SfcI	CTRYAG	4 cut(s)	714, 1693, 2001, 2382
SfuI	TTCGAA	2 cut(s)	203, 213
SinI	GGWCC	1 cut(s)	1950
SmiMI	CAYNNNNRTG	2 cut(s)	801, 1973
SmlI	CTYRAG	1 cut(s)	2180
SmoI	CTYRAG	1 cut(s)	2180
SpeI	ACTAGT	1 cut(s)	62
SphI	GCATGC	2 cut(s)	1746, 1750
SsiI	CCGC	3 cut(s)	1116, 1866, 2083
SspMI	CTAG	4 cut(s)	63, 1233, 1322, 1586
StyD4I	CCNGG	5 cut(s)	705, 1108, 1452, 1477, 1758
StyI	CCWWGG	2 cut(s)	1287, 1424
TaaI	ACNGT	8 cut(s)	121, 163, 221, 244, 1406, 1413, 1778, 1957
TaiI	ACGT	1 cut(s)	2372
TaqI	TCGA	6 cut(s)	203, 213, 737, 922, 1556, 2333
TatI	WGTACW	1 cut(s)	1309
TfiI	GAWTC	6 cut(s)	130, 136, 1332, 1700, 1941, 2117
TscAI	CASTG	6 cut(s)	938, 1001, 1409, 1702, 1793, 1960
TseFI	GTSAC	3 cut(s)	404, 838, 2057
TseI	GCWGC	7 cut(s)	1052, 1622, 1625, 2000, 2003, 2193, 2204
Tsp45I	GTSAC	3 cut(s)	404, 838, 2057
TspGWI	ACGGA	3 cut(s)	356, 832, 2164
TspRI	CASTG	6 cut(s)	938, 1001, 1409, 1702, 1793, 1960
Van91I	CCANNNNNTGG	2 cut(s)	996, 1718
Vha464I	CTTAAG	1 cut(s)	2180
VneI	GTGCAC	1 cut(s)	1407
VpaK11BI	GGWCC	1 cut(s)	1950
XapI	RAATTY	2 cut(s)	199, 2397
XceI	RCATGY	2 cut(s)	1746, 1750
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1719
XmiI	GTMKAC	1 cut(s)	737
XmnI	GAANNNNTTC	1 cut(s)	209
XspI	CTAG	4 cut(s)	63, 1233, 1322, 1586
Zsp2I	ATGCAT	1 cut(s)	1748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.