Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0008971

Physical Location & Seq

Genomic Coordinates Forward (+)

68531459 .. 68535340

Gene Structure 3882 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0502900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGGGGAGTTACCGGATGTGCGTCTGCTTCACTCGCAAGTTCAGGATCACAGAGGCGGAGCCGCCTTCTGACGTGACGGAGTATTTCGCTAAGTACGCCGAGGGAGGGACCCACATGACGGCCGAGCAGCTCAGGAACTTCCTGGCGGATGTCCAGGGCTACGGCGGGGCGTCGACCTCGGACGCCGAGCGGATCGTGGAGCAGGTGCTGCAGAAGAGGCACCACCACATTGCCAAGTTGATAACAAGGCGCACGCTCACTCTAGAAGACTTCCACCATTACTTGTTCTCCGCCGATCTCAATCCTCCAATCGAGAACCAGGTTCATCAGGATATGAATGCTCCATTGTCTCATTACTACATTTATACTGGACATAATTCATACCTGACTGGAAATCAACTCAGTAGTGACTGTAGTCATGTGCCAATCATAAAGGCGCTAAAGAGAGGTGTGAGAGTGGTGGAGCTTGATCTTTGGCCAAATTCCAAAAAGGATGATGTTAATGTTCTTCATGGAAGGACCTTGACAACCCCTGTGGAACTTGTTAAATGCTTGAAATCAATTAAGGAGCATGCTTTTACTGATTCTCCATACCCTGTAGTCATAACTCTTGAAGACCACCTTACCCCTGATCTCCAAGCTAAAGTAGCAAAGCTGCTCATGAAGACATTTAAGGATATGTTGTTTATTCCTGATTCCGAGTGTTTCAAAAAATTACCTTCACCAGAAGAACTGAAGTATCGAATTATCATATCTACCAAACCTCCTAAGGAGTACCTTGAGGATAAATGTGTCACTGTCAAGGCAGATAACATACACAAGAGAAAAGATAGCGAAGAAGATGCATGGGGGAATGAACCTTCAGAGCTTACGGAGGAACACGAAGATGTTGATACGAGTGAAAGTGAAGCAAGTGAACAAAATATGGATTACGAGGATAACAATAACTCTAATCGTGGAGCAGAACCCGCATCATACAAACGTCTCATTGCACTCCATGCTGGGAAACCAAATGGTGGTTTAAAGGAGGCACTAAAAGTTGAAGTTGATAGAGTTAGACGCCTTAGTTTGAGTGAACAAGCACTTGAGAAGGCTGCTGAATCTCATGGAACTGATGTTGTTAGATTCACCCAGAAGAACATTTTAAGGGTGTATCCAAAAGGAACTCGGTTCAACTCCTCCAACTACAAGCCGCTTATTGGCTGGATGCATGGTGCTCAAATGGTTGCATTTAATATGCAGGGATATGGTAAATCTCTTTGGCTGATGCATGGGATGTTTAGAGCAAATGGGGGCTGTGGTTATGTGAAAAAGCCTGATTTTGTTATGAACGATGAGCAGATTTTCGATCCTAAAGCAAAATTGCCAGTAAAGAAGACTTTAAAGGTGAAAGTATATATGGGAGATGGTTGGCATCTGGATTTCAAACAAACACACTTTGATTTATATTCACCACCAGATTTTTACACCAGGGTCGGCATAGCAGGAGTTCCAGCTGATGAGGTAATGAATAAAACTAAGAAAAAAGAGGACGATTGGACTCCTGTATGGGAAGAAGAGTTTACATTTCCATTGAGAGCCCCAGAGTTGGCTCTGCTTAGAATTGAGGTACATGAATATGACATGTCTGAGAAAGATGACTTTGGCGGCCAGACTTGTCTGCCAGTCTCTGAATTGAGACAAGGAATTCGTGCAGTCCCTCTCTTTGACCGTAAAGGAGTGAAATACAACTCAGTGAGGCTTCTAATGCGATTTGAGTTCACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005911 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009506 GO:0012505 GO:0016740 GO:0016741 GO:0030054 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

588

Amino Acids

67.32

Weight (kDa)

6.36

Isoelectric Point (pI)

45.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PI-PLC-X	PF00388	112 - 254	1e-53	Phosphatidylinositol-specific phospholipase C, X domain
PI-PLC-Y	PF00387	355 - 441	8.1e-29	Phosphatidylinositol-specific phospholipase C, Y domain
C2	PF00168	460 - 562	5.6e-13	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008971)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29470 AT1G29470 AT2G34300 AT2G34300 AT2G34300
fragaria_vesca	FvH4_2g00990 FvH4_2g00990
malus_domestica	MD05G1008600.v1.1 MD10G1006100.v1.1
prunus_persica	Prupe.8G010300_v2.0.a1
pyrus_communis	pycom10g00450
rosa_chinensis	RchiOBHm_Chr6g0251511
rosa_laevigata	RLG00000015461
rosa_multiflora	Rmu_sc0001382.1_g000020 Rmu_sc0040206.1_g000001
rosa_roxburghii	Rroxscaffold_7G00216610
rosa_rugosa	Rorug05G0502800 Rorug05G0502900
rosa_samantha	Rh6AG011600 Rh6BG010400 Rh6CG009000
rosa_wichuraiana	Rw6G001340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	193
Acc36I	ACCTGC	1 cut(s)	193
AccB1I	GGYRCC	1 cut(s)	219
AccB7I	CCANNNNNTGG	1 cut(s)	1016
AccBSI	CCGCTC	1 cut(s)	190
AccI	GTMKAC	1 cut(s)	173
AciI	CCGC	9 cut(s)	56, 62, 146, 165, 190, 291, 969, 1193, 1647
AclWI	GGATC	3 cut(s)	53, 200, 1343
AcoI	YGGCCR	3 cut(s)	120, 476, 1648
AcsI	RAATTY	2 cut(s)	481, 1686
AcuI	CTGAAG	2 cut(s)	755, 846
AcyI	GRCGYC	3 cut(s)	170, 183, 1060
AfaI	GTAC	3 cut(s)	95, 776, 1611
AfiI	CCNNNNNNNGG	5 cut(s)	105, 118, 1016, 1199, 1588
AflIII	ACRYGT	1 cut(s)	1623
AgsI	TTSAA	6 cut(s)	556, 614, 709, 1043, 1174, 1426
AjiI	CACGTC	1 cut(s)	73
AjnI	CCWGG	4 cut(s)	141, 153, 318, 1469
AluBI	AGCT	6 cut(s)	130, 466, 641, 655, 868, 1496
AluI	AGCT	6 cut(s)	130, 466, 641, 655, 868, 1496
Alw21I	GWGCWC	1 cut(s)	1219
Alw26I	GTCTC	4 cut(s)	354, 989, 1672, 1672
AlwI	GGATC	3 cut(s)	53, 200, 1343
AlwNI	CAGNNNCTG	2 cut(s)	208, 1670
AoxI	GGCC	3 cut(s)	120, 476, 1648
ApeKI	GCWGC	4 cut(s)	127, 208, 655, 1094
ApoI	RAATTY	2 cut(s)	481, 1686
ArsI	GACNNNNNNTTYG	2 cut(s)	1671, 1703
AspLEI	GCGC	2 cut(s)	252, 439
AspS9I	GGNCC	2 cut(s)	108, 519
AsuHPI	GGTGA	5 cut(s)	714, 1120, 1399, 1443, 1753
AvaII	GGWCC	2 cut(s)	108, 519
AxyI	CCTNAGG	1 cut(s)	768
BaeI	ACNNNNGTAYC	2 cut(s)	722, 755
BalI	TGGCCA	1 cut(s)	478
BanI	GGYRCC	1 cut(s)	219
BanII	GRGCYC	1 cut(s)	1582
BbsI	GAAGAC	4 cut(s)	273, 621, 671, 1382
Bbv12I	GWGCWC	1 cut(s)	1219
BbvI	GCAGC	4 cut(s)	139, 195, 642, 1081
BccI	CCATC	1 cut(s)	1400
BceAI	ACGGC	2 cut(s)	135, 178
BcgI	CGANNNNNNTGC	2 cut(s)	824, 858
BciT130I	CCWGG	4 cut(s)	143, 155, 320, 1471
BciVI	GTATCC	1 cut(s)	1164
BcoDI	GTCTC	4 cut(s)	354, 989, 1672, 1672
BfaI	CTAG	1 cut(s)	263
BfmI	CTRYAG	3 cut(s)	209, 412, 597
BfoI	RGCGCY	1 cut(s)	440
BfuAI	ACCTGC	1 cut(s)	193
BfuI	GTATCC	1 cut(s)	1164
BisI	GCNGC	7 cut(s)	62, 128, 209, 656, 1095, 1193, 1648
BlsI	GCNGC	7 cut(s)	63, 129, 210, 657, 1096, 1194, 1649
Bme1390I	CCNGG	4 cut(s)	143, 155, 320, 1471
Bme18I	GGWCC	2 cut(s)	108, 519
BmgBI	CACGTC	1 cut(s)	73
BmgT120I	GGNCC	2 cut(s)	108, 519
BmiI	GGNNCC	4 cut(s)	60, 109, 110, 221
BmrFI	CCNGG	4 cut(s)	143, 155, 320, 1471
BmsI	GCATC	5 cut(s)	832, 980, 1197, 1257, 1423
BoxI	GACNNNNGTC	1 cut(s)	414
BpiI	GAAGAC	4 cut(s)	273, 621, 671, 1382
Bpu10I	CCTNAGC	1 cut(s)	131
BpuEI	CTTGAG	2 cut(s)	800, 1106
BsaBI	GATNNNNATC	1 cut(s)	300
BsaHI	GRCGYC	3 cut(s)	170, 183, 1060
BsaJI	CCNNGG	4 cut(s)	99, 154, 177, 1470
BsaWI	WCCGGW	1 cut(s)	12
BsaXI	ACNNNNNCTCC	6 cut(s)	272, 302, 571, 601, 748, 778
Bsc4I	CCNNNNNNNGG	5 cut(s)	105, 118, 1016, 1199, 1588
Bse1I	ACTGG	4 cut(s)	373, 394, 1367, 1664
Bse21I	CCTNAGG	1 cut(s)	768
Bse3DI	GCAATG	2 cut(s)	228, 987
Bse8I	GATNNNNATC	1 cut(s)	300
BseBI	CCWGG	4 cut(s)	143, 155, 320, 1471
BseDI	CCNNGG	4 cut(s)	99, 154, 177, 1470
BseGI	GGATG	5 cut(s)	21, 154, 499, 1212, 1281
BseJI	GATNNNNATC	1 cut(s)	300
BseLI	CCNNNNNNNGG	5 cut(s)	105, 118, 1016, 1199, 1588
BseMI	GCAATG	2 cut(s)	228, 987
BseMII	CTCAG	4 cut(s)	145, 415, 1620, 1746
BseNI	ACTGG	4 cut(s)	373, 394, 1367, 1664
BseRI	GAGGAG	1 cut(s)	1168
BseX3I	CGGCCG	1 cut(s)	120
BseXI	GCAGC	4 cut(s)	139, 195, 642, 1081
BseYI	CCCAGC	1 cut(s)	1001
BsgI	GTGCAG	1 cut(s)	1713
Bsh1285I	CGRYCG	1 cut(s)	123
BshFI	GGCC	3 cut(s)	122, 478, 1650
BshNI	GGYRCC	1 cut(s)	219
BsiEI	CGRYCG	1 cut(s)	123
BsiHKAI	GWGCWC	1 cut(s)	1219
BsiSI	CCGG	1 cut(s)	13
BslFI	GGGAC	2 cut(s)	121, 1682
BslI	CCNNNNNNNGG	5 cut(s)	105, 118, 1016, 1199, 1588
BsmAI	GTCTC	4 cut(s)	354, 989, 1672, 1672
BsmBI	CGTCTC	1 cut(s)	989
BsmFI	GGGAC	2 cut(s)	121, 1682
BsmI	GAATGC	1 cut(s)	343
BsnI	GGCC	3 cut(s)	122, 478, 1650
Bsp1286I	GDGCHC	2 cut(s)	1219, 1582
Bsp143I	GATC	6 cut(s)	45, 192, 295, 469, 631, 1348
BspACI	CCGC	9 cut(s)	56, 62, 146, 165, 190, 291, 969, 1193, 1647
BspANI	GGCC	3 cut(s)	122, 478, 1650
BspCNI	CTCAG	4 cut(s)	144, 414, 1621, 1745
BspHI	TCATGA	1 cut(s)	660
BspLI	GGNNCC	4 cut(s)	60, 109, 110, 221
BspMAI	CTGCAG	1 cut(s)	213
BspMI	ACCTGC	1 cut(s)	193
BspPI	GGATC	3 cut(s)	53, 200, 1343
BspT107I	GGYRCC	1 cut(s)	219
BsrBI	CCGCTC	1 cut(s)	190
BsrDI	GCAATG	2 cut(s)	228, 987
BsrI	ACTGG	4 cut(s)	373, 394, 1367, 1664
BssECI	CCNNGG	4 cut(s)	99, 154, 177, 1470
BssMI	GATC	6 cut(s)	45, 192, 295, 469, 631, 1348
BssNI	GRCGYC	3 cut(s)	170, 183, 1060
Bst2UI	CCWGG	4 cut(s)	143, 155, 320, 1471
Bst4CI	ACNGT	3 cut(s)	413, 799, 1712
Bst6I	CTCTTC	2 cut(s)	209, 1551
BstACI	GRCGYC	3 cut(s)	170, 183, 1060
BstAPI	GCANNNNNTGC	2 cut(s)	208, 998
BstC8I	GCNNGC	2 cut(s)	254, 573
BstDEI	CTNAG	9 cut(s)	90, 131, 401, 768, 1064, 1518, 1598, 1629, 1732
BstF5I	GGATG	5 cut(s)	21, 154, 499, 1212, 1281
BstH2I	RGCGCY	1 cut(s)	440
BstHHI	GCGC	2 cut(s)	252, 439
BstKTI	GATC	6 cut(s)	48, 195, 298, 472, 634, 1351
BstMAI	GTCTC	4 cut(s)	354, 989, 1672, 1672
BstMBI	GATC	6 cut(s)	45, 192, 295, 469, 631, 1348
BstMCI	CGRYCG	1 cut(s)	123
BstMWI	GCNNNNNNNGC	8 cut(s)	33, 95, 208, 217, 647, 968, 998, 1747
BstNI	CCWGG	4 cut(s)	143, 155, 320, 1471
BstNSI	RCATGY	2 cut(s)	575, 1627
BstPAI	GACNNNNGTC	1 cut(s)	414
BstSCI	CCNGG	4 cut(s)	141, 153, 318, 1469
BstSFI	CTRYAG	3 cut(s)	209, 412, 597
BstV1I	GCAGC	4 cut(s)	139, 195, 642, 1081
BstV2I	GAAGAC	4 cut(s)	273, 621, 671, 1382
BstZI	CGGCCG	1 cut(s)	120
Bsu36I	CCTNAGG	1 cut(s)	768
BsuI	GTATCC	1 cut(s)	1164
BsuRI	GGCC	3 cut(s)	122, 478, 1650
BtrI	CACGTC	1 cut(s)	73
BtsCI	GGATG	5 cut(s)	21, 154, 499, 1212, 1281
BtsIMutI	CAGTG	2 cut(s)	795, 1740
BveI	ACCTGC	1 cut(s)	193
Cac8I	GCNNGC	2 cut(s)	254, 573
CaiI	CAGNNNCTG	2 cut(s)	208, 1670
CciI	TCATGA	1 cut(s)	660
CfoI	GCGC	2 cut(s)	252, 439
Cfr13I	GGNCC	2 cut(s)	108, 519
CseI	GACGC	4 cut(s)	10, 159, 191, 1068
CsiI	ACCWGGT	1 cut(s)	318
Csp6I	GTAC	3 cut(s)	94, 775, 1610
CspCI	CAANNNNNGTGG	2 cut(s)	516, 551
CviQI	GTAC	3 cut(s)	94, 775, 1610
DdeI	CTNAG	9 cut(s)	90, 131, 401, 768, 1064, 1518, 1598, 1629, 1732
DpnI	GATC	6 cut(s)	47, 194, 297, 471, 633, 1350
DpnII	GATC	6 cut(s)	45, 192, 295, 469, 631, 1348
DraI	TTTAAA	2 cut(s)	1023, 1383
EaeI	YGGCCR	3 cut(s)	120, 476, 1648
EagI	CGGCCG	1 cut(s)	120
Eam1104I	CTCTTC	2 cut(s)	209, 1551
EarI	CTCTTC	2 cut(s)	209, 1551
EciI	GGCGGA	3 cut(s)	71, 161, 280
EclXI	CGGCCG	1 cut(s)	120
Eco24I	GRGCYC	1 cut(s)	1582
Eco47I	GGWCC	2 cut(s)	108, 519
Eco52I	CGGCCG	1 cut(s)	120
Eco57I	CTGAAG	2 cut(s)	755, 846
Eco81I	CCTNAGG	1 cut(s)	768
EcoO109I	RGGNCCY	2 cut(s)	108, 519
EcoRI	GAATTC	1 cut(s)	1686
EcoRII	CCWGG	4 cut(s)	141, 153, 318, 1469
EcoT22I	ATGCAT	3 cut(s)	847, 1212, 1272
EcoT38I	GRGCYC	1 cut(s)	1582
Esp3I	CGTCTC	1 cut(s)	989
FalI	AAGNNNNNCTT	2 cut(s)	606, 638
FaqI	GGGAC	2 cut(s)	121, 1682
FauI	CCCGC	2 cut(s)	158, 976
FblI	GTMKAC	1 cut(s)	173
Fnu4HI	GCNGC	7 cut(s)	62, 128, 209, 656, 1095, 1193, 1648
FokI	GGATG	5 cut(s)	28, 161, 506, 1219, 1288
FriOI	GRGCYC	1 cut(s)	1582
Fsp4HI	GCNGC	7 cut(s)	62, 128, 209, 656, 1095, 1193, 1648
FspBI	CTAG	1 cut(s)	263
GlaI	GCGC	2 cut(s)	251, 438
GluI	GCNGC	7 cut(s)	62, 128, 209, 656, 1095, 1193, 1648
GsaI	CCCAGC	1 cut(s)	1005
HaeII	RGCGCY	1 cut(s)	440
HaeIII	GGCC	3 cut(s)	122, 478, 1650
HapII	CCGG	1 cut(s)	13
HgaI	GACGC	4 cut(s)	10, 159, 191, 1068
HhaI	GCGC	2 cut(s)	252, 439
Hin1I	GRCGYC	3 cut(s)	170, 183, 1060
Hin6I	GCGC	2 cut(s)	250, 437
HinP1I	GCGC	2 cut(s)	250, 437
HincII	GTYRAC	1 cut(s)	174
HindII	GTYRAC	1 cut(s)	174
HinfI	GANTC	5 cut(s)	584, 695, 1100, 1125, 1540
HpaII	CCGG	1 cut(s)	13
HphI	GGTGA	5 cut(s)	714, 1120, 1399, 1443, 1753
Hpy166II	GTNNAC	5 cut(s)	174, 917, 1076, 1563, 1761
Hpy188I	TCNGA	6 cut(s)	70, 181, 700, 865, 1630, 1672
Hpy188III	TCNNGA	9 cut(s)	43, 133, 263, 313, 329, 611, 661, 692, 1418
Hpy8I	GTNNAC	5 cut(s)	174, 917, 1076, 1563, 1761
Hpy99I	CGWCG	1 cut(s)	175
HpyAV	CCTTC	5 cut(s)	75, 510, 729, 870, 1084
HpyCH4III	ACNGT	3 cut(s)	413, 799, 1712
HpyCH4IV	ACGT	2 cut(s)	72, 982
HpyCH4V	TGCA	8 cut(s)	211, 845, 992, 1210, 1229, 1240, 1270, 1694
HpyF10VI	GCNNNNNNNGC	8 cut(s)	33, 95, 208, 217, 647, 968, 998, 1747
HpyF3I	CTNAG	9 cut(s)	90, 131, 401, 768, 1064, 1518, 1598, 1629, 1732
HpySE526I	ACGT	2 cut(s)	72, 982
Hsp92I	GRCGYC	3 cut(s)	170, 183, 1060
HspAI	GCGC	2 cut(s)	250, 437
KflI	GGGWCCC	1 cut(s)	108
Kzo9I	GATC	6 cut(s)	45, 192, 295, 469, 631, 1348
LmnI	GCTCC	6 cut(s)	58, 199, 346, 463, 568, 959
Lsp1109I	GCAGC	4 cut(s)	139, 195, 642, 1081
LweI	GCATC	5 cut(s)	832, 980, 1197, 1257, 1423
MabI	ACCWGGT	1 cut(s)	318
MaeI	CTAG	1 cut(s)	263
MaeII	ACGT	2 cut(s)	72, 982
MaeIII	GTNAC	4 cut(s)	8, 73, 407, 793
MalI	GATC	6 cut(s)	47, 194, 297, 471, 633, 1350
MbiI	CCGCTC	1 cut(s)	190
MboI	GATC	6 cut(s)	45, 192, 295, 469, 631, 1348
MhlI	GDGCHC	2 cut(s)	1219, 1582
MlsI	TGGCCA	1 cut(s)	478
MluCI	AATT	9 cut(s)	376, 481, 561, 713, 744, 1361, 1602, 1673, 1686
MluNI	TGGCCA	1 cut(s)	478
MlyI	GAGTC	1 cut(s)	1534
MmeI	TCCRAC	1 cut(s)	1206
Mox20I	TGGCCA	1 cut(s)	478
Mph1103I	ATGCAT	3 cut(s)	847, 1212, 1272
MscI	TGGCCA	1 cut(s)	478
MseI	TTAA	8 cut(s)	501, 546, 564, 672, 1022, 1145, 1233, 1382
MslI	CAYNNNNRTG	2 cut(s)	885, 1617
Msp20I	TGGCCA	1 cut(s)	478
MspA1I	CMGCKG	1 cut(s)	1496
MspI	CCGG	1 cut(s)	13
MspR9I	CCNGG	4 cut(s)	143, 155, 320, 1471
Mva1269I	GAATGC	1 cut(s)	343
MvaI	CCWGG	4 cut(s)	143, 155, 320, 1471
MwoI	GCNNNNNNNGC	8 cut(s)	33, 95, 208, 217, 647, 968, 998, 1747
NdeII	GATC	6 cut(s)	45, 192, 295, 469, 631, 1348
NlaIV	GGNNCC	4 cut(s)	60, 109, 110, 221
NmeAIII	GCCGAG	3 cut(s)	124, 148, 211
NmuCI	GTSAC	3 cut(s)	73, 407, 793
NsiI	ATGCAT	3 cut(s)	847, 1212, 1272
NspI	RCATGY	2 cut(s)	575, 1627
PaeI	GCATGC	1 cut(s)	575
PagI	TCATGA	1 cut(s)	660
PaqCI	CACCTGC	1 cut(s)	193
PciI	ACATGT	1 cut(s)	1623
PctI	GAATGC	1 cut(s)	343
PfeI	GAWTC	4 cut(s)	584, 695, 1100, 1125
PflMI	CCANNNNNTGG	1 cut(s)	1016
PkrI	GCNGC	7 cut(s)	63, 129, 210, 657, 1096, 1194, 1649
PleI	GAGTC	1 cut(s)	1534
PpsI	GAGTC	1 cut(s)	1534
PpuMI	RGGWCCY	2 cut(s)	108, 519
PscI	ACATGT	1 cut(s)	1623
PshAI	GACNNNNGTC	1 cut(s)	414
Psp5II	RGGWCCY	2 cut(s)	108, 519
Psp6I	CCWGG	4 cut(s)	141, 153, 318, 1469
PspFI	CCCAGC	1 cut(s)	1001
PspGI	CCWGG	4 cut(s)	141, 153, 318, 1469
PspN4I	GGNNCC	4 cut(s)	60, 109, 110, 221
PspPI	GGNCC	2 cut(s)	108, 519
PspPPI	RGGWCCY	2 cut(s)	108, 519
PstI	CTGCAG	1 cut(s)	213
PstNI	CAGNNNCTG	2 cut(s)	208, 1670
PvuII	CAGCTG	1 cut(s)	1496
RsaI	GTAC	3 cut(s)	95, 776, 1611
RsaNI	GTAC	3 cut(s)	94, 775, 1610
RseI	CAYNNNNRTG	2 cut(s)	885, 1617
SalI	GTCGAC	1 cut(s)	172
SaqAI	TTAA	8 cut(s)	501, 546, 564, 672, 1022, 1145, 1233, 1382
SatI	GCNGC	7 cut(s)	62, 128, 209, 656, 1095, 1193, 1648
Sau3AI	GATC	6 cut(s)	45, 192, 295, 469, 631, 1348
Sau96I	GGNCC	2 cut(s)	108, 519
SchI	GAGTC	1 cut(s)	1534
ScrFI	CCNGG	4 cut(s)	143, 155, 320, 1471
SduI	GDGCHC	2 cut(s)	1219, 1582
SexAI	ACCWGGT	1 cut(s)	318
SfaNI	GCATC	5 cut(s)	832, 980, 1197, 1257, 1423
SfcI	CTRYAG	3 cut(s)	209, 412, 597
SinI	GGWCC	2 cut(s)	108, 519
SmiMI	CAYNNNNRTG	2 cut(s)	885, 1617
SmlI	CTYRAG	2 cut(s)	779, 1085
SmoI	CTYRAG	2 cut(s)	779, 1085
SphI	GCATGC	1 cut(s)	575
Sse9I	AATT	9 cut(s)	376, 481, 561, 713, 744, 1361, 1602, 1673, 1686
SsiI	CCGC	9 cut(s)	56, 62, 146, 165, 190, 291, 969, 1193, 1647
SspMI	CTAG	1 cut(s)	263
StyD4I	CCNGG	4 cut(s)	141, 153, 318, 1469
TaaI	ACNGT	3 cut(s)	413, 799, 1712
TaiI	ACGT	2 cut(s)	75, 985
TaqI	TCGA	4 cut(s)	173, 312, 742, 1347
TasI	AATT	9 cut(s)	376, 481, 561, 713, 744, 1361, 1602, 1673, 1686
TauI	GCSGC	3 cut(s)	64, 1195, 1650
TfiI	GAWTC	4 cut(s)	584, 695, 1100, 1125
Tru1I	TTAA	8 cut(s)	501, 546, 564, 672, 1022, 1145, 1233, 1382
Tru9I	TTAA	8 cut(s)	501, 546, 564, 672, 1022, 1145, 1233, 1382
TscAI	CASTG	2 cut(s)	802, 1740
TseFI	GTSAC	3 cut(s)	73, 407, 793
TseI	GCWGC	4 cut(s)	127, 208, 655, 1094
Tsp45I	GTSAC	3 cut(s)	73, 407, 793
TspDTI	ATGAA	9 cut(s)	314, 350, 369, 500, 677, 870, 1343, 1523, 1629
TspGWI	ACGGA	2 cut(s)	92, 887
TspRI	CASTG	2 cut(s)	802, 1740
Van91I	CCANNNNNTGG	1 cut(s)	1016
VpaK11BI	GGWCC	2 cut(s)	108, 519
XapI	RAATTY	2 cut(s)	481, 1686
XbaI	TCTAGA	1 cut(s)	262
XceI	RCATGY	2 cut(s)	575, 1627
XmiI	GTMKAC	1 cut(s)	173
XspI	CTAG	1 cut(s)	263
Zsp2I	ATGCAT	3 cut(s)	847, 1212, 1272

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.