Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0008971

Physical Location & Seq

Genomic Coordinates Forward (+)

66407205 .. 66411993

Gene Structure 4789 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015461

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2460 bp

ATGACACGTGAGCAAAACGACCCTACAGTGTGCATAATTTGGGGTATCGATCTTCGCCTCCTAAAGATGGCTATGGGGAAGTATTCCCGAGTTGACGGAAAGAAGTCACTGAATTGTTGCTCAACAACCAGTCTAGTTGTATTTGTTGCATTTTGTTTAGTTGGGGTTTGGATGTTAATGTCATCAGTTGTTCCGATTCAGAGTCAAAACTTATCAACCGAGGAGAATCTGACCGATAAAAGTTCTAAGCAATATGAAGACAGTTCTGGTGGATTATCAGAAACTCTAATAAGAGAGGATGACAGTGGCAGTGATTCACAGAGTGAAACCAATATTGAAAATACTCAAAATGTTTCACAGGACGAGTCTGTGAGTACAAGTGATGAAAAACAGGAAGAAGTGGTTTCAAAGGAGGTTTCTGAGGAGAAAGTTGAGTCTGAAAGTGAGAATGGTGATGAGGGGAATCAGCAAGAGAAGTTTGTGAAGGAGAGCTCTGATGAGAAAACTGAGAGCGAAGAGGAACCAAAGACAGAGAACGAAAATGATGGGGATGCGAAAGTAAATGATCAGGAAGCTAGTTCTGGAGATGGTCAGTCAAACTCAGAAGCTGAATCAACAGAGGAAGCAAGTGCTAAAACGAGTGAAAATGAACAGACAGAATTAGAGGGTGAAAAGAAATCGGAGGGAGATGAATCTGCTGATGAAAAGAAGCAGGAAGATGAAGTTCCTAGTCAGACTGATGAGGAGAAGGTTGAGAACAATCAAGACAATAATTCAGAAGAAGGTGATACCGGTAATAACATGGACAGTGAGAAGGAAACAGAAAAGTCTTCAATATCTAAAACTCAGAGTGAGTATAGCTGGAAACTCTGTAATGTCACTGCAGGGCCTGACTACATCCCTTGTCTTGACAATTGGAAAACTATTAGAAAGCTTCCAAGTACAATGCACTATGAACATCGAGAGAGGCACTGCCCTGAGGAAGCTTCCACCTGTCTCGTTTCTCTACCTGAAGGATATAGACGGCCAATTCAGTGGCCAACAAGCAGGGAAAAGATATGGTACCACAACGTTCCTCACACCAAGCTTGCAGTAGTTAAGGGGCACCAAAATTGGGTTAAAGTTACTGGTGAATACCTTACTTTCCCTGGTGGTGGAACTCAGTTTAAGAATGGTGCTCTTCACTATATTGATTTTATTCAAAATTCTCTTCCTGATATTGCATGGGGTAAAAGAAGCCGTGTGATATTGGATGTTGGGTGTGGGGTAGCCAGCTTCGGAGGATTTCTATTTGACAGAGATGTTCTTGCCATGTCATTTGCTCCCAAGGATGAACACGAAGCCCAAGTTCAATTTGCGCTAGAGCGGGGTATCCCTGCCATATCAGCTGTTATGGGTACCACAAGGCTACCGTACCCAAGTTCTGTGTTTGATCTTATCCACTGTGCACGCTGTAGAGTCCCTTGGCATGTTGAAGGTGGTAAACTGCTCTTGGAGCTTAATCGTGTCTTGCGACCTGGTGGTTATTTTGTTTGGTCTGCAACTCCGGTTTACCAAAAGCTTCCTGAAGATGTTGGCATCTGGAAAGCGATGTCTGAACTAACTAAGTCAATTTGCTGGGATCTGGTGGTGATTAAAAAAGACAAGCTCAATCAAGTCGCTGCTGCTATATATAGGAAACCATCTACCAATGAGTGCTACAATGAAAGAGCACAAAATGAGCCTCCTCTTTGCAGTGAATCTGATGATCCAAATGCTGCCTGGAAAGTACCATTAGAGGCATGCATACACAAAGTACCTGAGGATGCGTCAGATCGTGGGTCTCAATGGCCACCACAGTGGCCATCAAGGTTGGAGAAACCACCATACTGGTTGAAGTCTCAGCTTGATGTTAATGGAAAATCTGCGCCAGAAGATTTTATTTCTGACTATAAGCATTGGAAGAATGTTGTGTCCAAGACATATTTGACTGGGATGGGAATCGATTGGTCATCTGTAAGGAATGTCCTGGACATGAGAGCTGTATACGGAGGGTTTGCTGCAGCACTGAAAGACTTAAAAGTATGGGTAATGAATGTAGTTCCGCCTATTGATTCTCGTGACACACTTGCAATAATCTTTGAGCGTGGATTAATCGGAATGTACCATGATTGGTGTGAATCATTCAGTACATATCCTAGGACTTATGATGTTGTCCATGCAGATCATCTGTTCTCTGTCCTTAAGAAAAGATGCAACCTGGTGGCGGTGATTGCGGAAGTGGACAGGATACTAAGGCCAGAAGGGAAGCTAATCGTATGGGATGATGCTGAAACCTTGAACGAGATCGAGAGCATGGTCAAATCTCTGCAGTGGGATATCCGATTTACTTACTCAAAAGACAACAAGGGTTTGCTCTGCATTCAGAAAACGTTTTGGCGTCCTACTGAGCAAGAGACAATTCTATCAGCCATTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005911 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009506 GO:0012505 GO:0016740 GO:0016741 GO:0030054 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

820

Amino Acids

92.38

Weight (kDa)

4.82

Isoelectric Point (pI)

47.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	298 - 799	2.7e-227	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	417 - 511	2.5e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008971)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29470 AT1G29470 AT2G34300 AT2G34300 AT2G34300
fragaria_vesca	FvH4_2g00990 FvH4_2g00990
malus_domestica	MD05G1008600.v1.1 MD10G1006100.v1.1
prunus_persica	Prupe.8G010300_v2.0.a1
pyrus_communis	pycom10g00450
rosa_chinensis	RchiOBHm_Chr6g0251511
rosa_laevigata	RLG00000015461
rosa_multiflora	Rmu_sc0001382.1_g000020 Rmu_sc0040206.1_g000001
rosa_roxburghii	Rroxscaffold_7G00216610
rosa_rugosa	Rorug05G0502800 Rorug05G0502900
rosa_samantha	Rh6AG011600 Rh6BG010400 Rh6CG009000
rosa_wichuraiana	Rw6G001340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	1062, 1397
AccB1I	GGYRCC	3 cut(s)	1062, 1104, 1397
AccBSI	CCGCTC	1 cut(s)	1366
AccI	GTMKAC	1 cut(s)	2025
AciI	CCGC	4 cut(s)	1366, 2084, 2246, 2255
AclI	AACGTT	2 cut(s)	1071, 2411
AclWI	GGATC	2 cut(s)	1629, 1742
AcoI	YGGCCR	4 cut(s)	1025, 1037, 1829, 1841
AcsI	RAATTY	1 cut(s)	1204
AcuI	CTGAAG	2 cut(s)	1032, 1587
AcvI	CACGTG	1 cut(s)	8
AcyI	GRCGYC	1 cut(s)	2419
AdeI	CACNNNGTG	1 cut(s)	323
AfaI	GTAC	9 cut(s)	376, 943, 1064, 1399, 1415, 1770, 1797, 2144, 2170
AfiI	CCNNNNNNNGG	4 cut(s)	67, 1114, 1154, 2245
AflII	CTTAAG	1 cut(s)	2222
AflIII	ACRYGT	1 cut(s)	5
AgeI	ACCGGT	1 cut(s)	791
AgsI	TTSAA	8 cut(s)	338, 408, 834, 1202, 1352, 1475, 1876, 2320
AjnI	CCWGG	5 cut(s)	1147, 1516, 1760, 2007, 2238
AleI	CACNNNNGTG	1 cut(s)	1837
Alw21I	GWGCWC	4 cut(s)	494, 1180, 1450, 1714
Alw26I	GTCTC	4 cut(s)	1001, 1827, 1884, 2429
Alw44I	GTGCAC	1 cut(s)	1446
AlwI	GGATC	2 cut(s)	1629, 1742
AlwNI	CAGNNNCTG	2 cut(s)	608, 890
Ama87I	CYCGRG	1 cut(s)	87
AoxI	GGCC	6 cut(s)	887, 1025, 1037, 1829, 1841, 2276
ApaLI	GTGCAC	1 cut(s)	1446
ApeKI	GCWGC	5 cut(s)	1661, 1664, 1757, 2039, 2042
ApoI	RAATTY	1 cut(s)	1204
AseI	ATTAAT	1 cut(s)	2132
AsiGI	ACCGGT	1 cut(s)	791
Asp718I	GGTACC	2 cut(s)	1062, 1397
AspA2I	CCTAGG	1 cut(s)	2177
AspLEI	GCGC	2 cut(s)	1360, 1909
AspS9I	GGNCC	1 cut(s)	887
AsuHPI	GGTGA	6 cut(s)	464, 680, 797, 1142, 1642, 2260
AvaI	CYCGRG	1 cut(s)	87
AvrII	CCTAGG	1 cut(s)	2177
AxyI	CCTNAGG	2 cut(s)	978, 1800
BaeGI	GKGCMC	2 cut(s)	1107, 1450
BalI	TGGCCA	3 cut(s)	1039, 1831, 1843
BanI	GGYRCC	3 cut(s)	1062, 1104, 1397
BanII	GRGCYC	1 cut(s)	494
BauI	CACGAG	1 cut(s)	2097
BbrPI	CACGTG	1 cut(s)	8
BbsI	GAAGAC	2 cut(s)	264, 822
Bbv12I	GWGCWC	4 cut(s)	494, 1180, 1450, 1714
BbvI	GCAGC	5 cut(s)	1648, 1651, 1744, 2026, 2054
BccI	CCATC	6 cut(s)	61, 539, 581, 1690, 1852, 1969
BceAI	ACGGC	2 cut(s)	1040, 1224
BciT130I	CCWGG	5 cut(s)	1149, 1518, 1762, 2009, 2240
BciVI	GTATCC	2 cut(s)	1382, 2262
BclI	TGATCA	1 cut(s)	565
BcoDI	GTCTC	4 cut(s)	1001, 1827, 1884, 2429
BfaI	CTAG	5 cut(s)	134, 576, 729, 1361, 2178
BfmI	CTRYAG	5 cut(s)	24, 882, 1453, 2040, 2348
BfrI	CTTAAG	1 cut(s)	2222
BfuI	GTATCC	2 cut(s)	1382, 2262
BisI	GCNGC	5 cut(s)	1662, 1665, 1758, 2040, 2043
BlnI	CCTAGG	1 cut(s)	2177
BlsI	GCNGC	5 cut(s)	1663, 1666, 1759, 2041, 2044
Bme1390I	CCNGG	5 cut(s)	1149, 1518, 1762, 2009, 2240
BmeT110I	CYCGRG	1 cut(s)	87
BmgT120I	GGNCC	1 cut(s)	887
BmiI	GGNNCC	4 cut(s)	522, 1064, 1106, 1399
BmrFI	CCNGG	5 cut(s)	1149, 1518, 1762, 2009, 2240
BmrI	ACTGGG	1 cut(s)	1980
BmsI	GCATC	5 cut(s)	541, 1587, 1795, 2222, 2296
BmuI	ACTGGG	1 cut(s)	1980
BpiI	GAAGAC	2 cut(s)	264, 822
BpmI	CTGGAG	1 cut(s)	603
Bsa29I	ATCGAT	2 cut(s)	48, 1983
BsaAI	YACGTR	1 cut(s)	8
BsaBI	GATNNNNATC	1 cut(s)	1979
BsaHI	GRCGYC	1 cut(s)	2419
BsaI	GGTCTC	1 cut(s)	1827
BsaJI	CCNNGG	5 cut(s)	219, 1147, 1326, 1463, 2177
BsaWI	WCCGGW	2 cut(s)	791, 1546
Bsc4I	CCNNNNNNNGG	4 cut(s)	67, 1114, 1154, 2245
Bse118I	RCCGGY	1 cut(s)	791
Bse1I	ACTGG	4 cut(s)	129, 1132, 1874, 1975
Bse21I	CCTNAGG	2 cut(s)	978, 1800
Bse3DI	GCAATG	1 cut(s)	2451
Bse8I	GATNNNNATC	1 cut(s)	1979
BseBI	CCWGG	5 cut(s)	1149, 1518, 1762, 2009, 2240
BseCI	ATCGAT	2 cut(s)	48, 1983
BseDI	CCNNGG	5 cut(s)	219, 1147, 1326, 1463, 2177
BseGI	GGATG	9 cut(s)	177, 304, 556, 897, 1258, 1336, 1810, 1980, 2308
BseJI	GATNNNNATC	1 cut(s)	1979
BseLI	CCNNNNNNNGG	4 cut(s)	67, 1114, 1154, 2245
BseMI	GCAATG	1 cut(s)	2451
BseMII	CTCAG	9 cut(s)	411, 498, 615, 860, 969, 1175, 1791, 1895, 2418
BseNI	ACTGG	4 cut(s)	129, 1132, 1874, 1975
BseRI	GAGGAG	4 cut(s)	236, 437, 758, 1716
BseSI	GKGCMC	2 cut(s)	1107, 1450
BseXI	GCAGC	5 cut(s)	1648, 1651, 1744, 2026, 2054
BseYI	CCCAGC	1 cut(s)	1617
BshFI	GGCC	6 cut(s)	889, 1027, 1039, 1831, 1843, 2278
BshNI	GGYRCC	3 cut(s)	1062, 1104, 1397
BshTI	ACCGGT	1 cut(s)	791
BshVI	ATCGAT	2 cut(s)	48, 1983
BsiHKAI	GWGCWC	4 cut(s)	494, 1180, 1450, 1714
BsiHKCI	CYCGRG	1 cut(s)	87
BsiSI	CCGG	2 cut(s)	792, 1547
BslFI	GGGAC	1 cut(s)	1445
BslI	CCNNNNNNNGG	4 cut(s)	67, 1114, 1154, 2245
BsmAI	GTCTC	4 cut(s)	1001, 1827, 1884, 2429
BsmFI	GGGAC	1 cut(s)	1445
BsmI	GAATGC	1 cut(s)	2400
BsnI	GGCC	6 cut(s)	889, 1027, 1039, 1831, 1843, 2278
Bso31I	GGTCTC	1 cut(s)	1827
BsoBI	CYCGRG	1 cut(s)	87
Bsp1286I	GDGCHC	5 cut(s)	494, 1107, 1180, 1450, 1714
Bsp143I	GATC	8 cut(s)	49, 565, 1432, 1621, 1747, 1813, 2203, 2325
BspACI	CCGC	4 cut(s)	1366, 2084, 2246, 2255
BspANI	GGCC	6 cut(s)	889, 1027, 1039, 1831, 1843, 2278
BspCNI	CTCAG	9 cut(s)	412, 499, 614, 859, 970, 1174, 1792, 1894, 2419
BspDI	ATCGAT	2 cut(s)	48, 1983
BspLI	GGNNCC	4 cut(s)	522, 1064, 1106, 1399
BspMAI	CTGCAG	3 cut(s)	886, 2044, 2352
BspPI	GGATC	2 cut(s)	1629, 1742
BspQI	GCTCTTC	1 cut(s)	1185
BspT107I	GGYRCC	3 cut(s)	1062, 1104, 1397
BspTI	CTTAAG	1 cut(s)	2222
BspTNI	GGTCTC	1 cut(s)	1827
BsrBI	CCGCTC	1 cut(s)	1366
BsrDI	GCAATG	1 cut(s)	2451
BsrFI	RCCGGY	1 cut(s)	791
BsrI	ACTGG	4 cut(s)	129, 1132, 1874, 1975
BssAI	RCCGGY	1 cut(s)	791
BssECI	CCNNGG	5 cut(s)	219, 1147, 1326, 1463, 2177
BssMI	GATC	8 cut(s)	49, 565, 1432, 1621, 1747, 1813, 2203, 2325
BssNAI	GTATAC	1 cut(s)	2026
BssNI	GRCGYC	1 cut(s)	2419
BssSI	CACGAG	1 cut(s)	2097
BssT1I	CCWWGG	3 cut(s)	1326, 1463, 2177
Bst1107I	GTATAC	1 cut(s)	2026
Bst2BI	CACGAG	1 cut(s)	2097
Bst2UI	CCWGG	5 cut(s)	1149, 1518, 1762, 2009, 2240
Bst4CI	ACNGT	7 cut(s)	28, 263, 305, 809, 1413, 1445, 1839
Bst6I	CTCTTC	3 cut(s)	510, 1185, 1215
BstACI	GRCGYC	1 cut(s)	2419
BstAFI	CTTAAG	1 cut(s)	2222
BstBAI	YACGTR	1 cut(s)	8
BstC8I	GCNNGC	4 cut(s)	1089, 1273, 1450, 1783
BstF5I	GGATG	9 cut(s)	177, 304, 556, 897, 1258, 1336, 1810, 1980, 2308
BstHHI	GCGC	2 cut(s)	1360, 1909
BstKTI	GATC	8 cut(s)	52, 568, 1435, 1624, 1750, 1816, 2206, 2328
BstMAI	GTCTC	4 cut(s)	1001, 1827, 1884, 2429
BstMBI	GATC	8 cut(s)	49, 565, 1432, 1621, 1747, 1813, 2203, 2325
BstMWI	GCNNNNNNNGC	3 cut(s)	1385, 1495, 2252
BstNI	CCWGG	5 cut(s)	1149, 1518, 1762, 2009, 2240
BstNSI	RCATGY	2 cut(s)	1472, 1785
BstSCI	CCNGG	5 cut(s)	1147, 1516, 1760, 2007, 2238
BstSFI	CTRYAG	5 cut(s)	24, 882, 1453, 2040, 2348
BstSLI	GKGCMC	2 cut(s)	1107, 1450
BstV1I	GCAGC	5 cut(s)	1648, 1651, 1744, 2026, 2054
BstV2I	GAAGAC	2 cut(s)	264, 822
BstX2I	RGATCY	1 cut(s)	1621
BstXI	CCANNNNNNTGG	3 cut(s)	1035, 1839, 1869
BstYI	RGATCY	1 cut(s)	1621
BstZ17I	GTATAC	1 cut(s)	2026
Bsu15I	ATCGAT	2 cut(s)	48, 1983
Bsu36I	CCTNAGG	2 cut(s)	978, 1800
BsuI	GTATCC	2 cut(s)	1382, 2262
BsuRI	GGCC	6 cut(s)	889, 1027, 1039, 1831, 1843, 2278
BsuTUI	ATCGAT	2 cut(s)	48, 1983
BtgZI	GCGATG	1 cut(s)	1604
BtsCI	GGATG	9 cut(s)	177, 304, 556, 897, 1258, 1336, 1810, 1980, 2308
BtsI	GCAGTG	5 cut(s)	316, 879, 970, 1741, 2357
Cac8I	GCNNGC	4 cut(s)	1089, 1273, 1450, 1783
CaiI	CAGNNNCTG	2 cut(s)	608, 890
CfoI	GCGC	2 cut(s)	1360, 1909
Cfr10I	RCCGGY	1 cut(s)	791
Cfr13I	GGNCC	1 cut(s)	887
ClaI	ATCGAT	2 cut(s)	48, 1983
CseI	GACGC	2 cut(s)	1797, 2408
CsiI	ACCWGGT	2 cut(s)	1516, 2238
Csp6I	GTAC	9 cut(s)	375, 942, 1063, 1398, 1414, 1769, 1796, 2143, 2169
CspAI	ACCGGT	1 cut(s)	791
CviAII	CATG	9 cut(s)	802, 1224, 1312, 1469, 1782, 2014, 2147, 2198, 2335
CviQI	GTAC	9 cut(s)	375, 942, 1063, 1398, 1414, 1769, 1796, 2143, 2169
DpnI	GATC	8 cut(s)	51, 567, 1434, 1623, 1749, 1815, 2205, 2327
DpnII	GATC	8 cut(s)	49, 565, 1432, 1621, 1747, 1813, 2203, 2325
DraIII	CACNNNGTG	1 cut(s)	323
EaeI	YGGCCR	4 cut(s)	1025, 1037, 1829, 1841
Eam1104I	CTCTTC	3 cut(s)	510, 1185, 1215
EarI	CTCTTC	3 cut(s)	510, 1185, 1215
EciI	GGCGGA	1 cut(s)	2073
Ecl136II	GAGCTC	1 cut(s)	492
Eco130I	CCWWGG	3 cut(s)	1326, 1463, 2177
Eco24I	GRGCYC	1 cut(s)	494
Eco31I	GGTCTC	1 cut(s)	1827
Eco32I	GATATC	1 cut(s)	2359
Eco53kI	GAGCTC	1 cut(s)	492
Eco57I	CTGAAG	2 cut(s)	1032, 1587
Eco72I	CACGTG	1 cut(s)	8
Eco81I	CCTNAGG	2 cut(s)	978, 1800
Eco88I	CYCGRG	1 cut(s)	87
EcoICRI	GAGCTC	1 cut(s)	492
EcoO109I	RGGNCCY	1 cut(s)	887
EcoRII	CCWGG	5 cut(s)	1147, 1516, 1760, 2007, 2238
EcoRV	GATATC	1 cut(s)	2359
EcoT14I	CCWWGG	3 cut(s)	1326, 1463, 2177
EcoT22I	ATGCAT	1 cut(s)	1787
EcoT38I	GRGCYC	1 cut(s)	494
ErhI	CCWWGG	3 cut(s)	1326, 1463, 2177
FaeI	CATG	9 cut(s)	805, 1227, 1315, 1472, 1785, 2017, 2150, 2201, 2338
FaqI	GGGAC	1 cut(s)	1445
FatI	CATG	9 cut(s)	801, 1223, 1311, 1468, 1781, 2013, 2146, 2197, 2334
FauI	CCCGC	1 cut(s)	1359
FbaI	TGATCA	1 cut(s)	565
FblI	GTMKAC	1 cut(s)	2025
Fnu4HI	GCNGC	5 cut(s)	1662, 1665, 1758, 2040, 2043
FokI	GGATG	9 cut(s)	184, 311, 563, 884, 1265, 1343, 1817, 1987, 2315
FriOI	GRGCYC	1 cut(s)	494
Fsp4HI	GCNGC	5 cut(s)	1662, 1665, 1758, 2040, 2043
FspBI	CTAG	5 cut(s)	134, 576, 729, 1361, 2178
GlaI	GCGC	2 cut(s)	1359, 1908
GluI	GCNGC	5 cut(s)	1662, 1665, 1758, 2040, 2043
GsaI	CCCAGC	1 cut(s)	1621
GsuI	CTGGAG	1 cut(s)	603
HaeIII	GGCC	6 cut(s)	889, 1027, 1039, 1831, 1843, 2278
HapII	CCGG	2 cut(s)	792, 1547
HgaI	GACGC	2 cut(s)	1797, 2408
HhaI	GCGC	2 cut(s)	1360, 1909
Hin1I	GRCGYC	1 cut(s)	2419
Hin1II	CATG	9 cut(s)	805, 1227, 1315, 1472, 1785, 2017, 2150, 2201, 2338
Hin6I	GCGC	2 cut(s)	1358, 1907
HinP1I	GCGC	2 cut(s)	1358, 1907
HincII	GTYRAC	1 cut(s)	94
HindII	GTYRAC	1 cut(s)	94
HindIII	AAGCTT	4 cut(s)	932, 984, 1085, 1559
HpaII	CCGG	2 cut(s)	792, 1547
HphI	GGTGA	6 cut(s)	464, 680, 797, 1142, 1642, 2260
Hpy166II	GTNNAC	6 cut(s)	94, 1448, 1484, 1552, 2026, 2263
Hpy8I	GTNNAC	6 cut(s)	94, 1448, 1484, 1552, 2026, 2263
HpyAV	CCTTC	7 cut(s)	478, 742, 776, 808, 1007, 1469, 2276
HpyCH4III	ACNGT	7 cut(s)	28, 263, 305, 809, 1413, 1445, 1839
HpyCH4IV	ACGT	3 cut(s)	7, 1071, 2411
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1385, 1495, 2252
HpySE526I	ACGT	3 cut(s)	7, 1071, 2411
Hsp92I	GRCGYC	1 cut(s)	2419
Hsp92II	CATG	9 cut(s)	805, 1227, 1315, 1472, 1785, 2017, 2150, 2201, 2338
HspAI	GCGC	2 cut(s)	1358, 1907
KpnI	GGTACC	2 cut(s)	1066, 1401
Ksp22I	TGATCA	1 cut(s)	565
Kzo9I	GATC	8 cut(s)	49, 565, 1432, 1621, 1747, 1813, 2203, 2325
LguI	GCTCTTC	1 cut(s)	1185
LmnI	GCTCC	2 cut(s)	1327, 1495
Lsp1109I	GCAGC	5 cut(s)	1648, 1651, 1744, 2026, 2054
LweI	GCATC	5 cut(s)	541, 1587, 1795, 2222, 2296
MabI	ACCWGGT	2 cut(s)	1516, 2238
MaeI	CTAG	5 cut(s)	134, 576, 729, 1361, 2178
MaeII	ACGT	3 cut(s)	7, 1071, 2411
MaeIII	GTNAC	4 cut(s)	105, 877, 1123, 2099
MalI	GATC	8 cut(s)	51, 567, 1434, 1623, 1749, 1815, 2205, 2327
MbiI	CCGCTC	1 cut(s)	1366
MboI	GATC	8 cut(s)	49, 565, 1432, 1621, 1747, 1813, 2203, 2325
MfeI	CAATTG	1 cut(s)	913
MflI	RGATCY	1 cut(s)	1621
MhlI	GDGCHC	5 cut(s)	494, 1107, 1180, 1450, 1714
MlsI	TGGCCA	3 cut(s)	1039, 1831, 1843
MluNI	TGGCCA	3 cut(s)	1039, 1831, 1843
MlyI	GAGTC	4 cut(s)	211, 374, 443, 1467
MmeI	TCCRAC	1 cut(s)	1833
Mox20I	TGGCCA	3 cut(s)	1039, 1831, 1843
Mph1103I	ATGCAT	1 cut(s)	1787
MscI	TGGCCA	3 cut(s)	1039, 1831, 1843
MslI	CAYNNNNRTG	1 cut(s)	1837
Msp20I	TGGCCA	3 cut(s)	1039, 1831, 1843
MspA1I	CMGCKG	1 cut(s)	1388
MspCI	CTTAAG	1 cut(s)	2222
MspI	CCGG	2 cut(s)	792, 1547
MspR9I	CCNGG	5 cut(s)	1149, 1518, 1762, 2009, 2240
MunI	CAATTG	1 cut(s)	913
Mva1269I	GAATGC	1 cut(s)	2400
MvaI	CCWGG	5 cut(s)	1149, 1518, 1762, 2009, 2240
MwoI	GCNNNNNNNGC	3 cut(s)	1385, 1495, 2252
NdeII	GATC	8 cut(s)	49, 565, 1432, 1621, 1747, 1813, 2203, 2325
NlaIII	CATG	9 cut(s)	805, 1227, 1315, 1472, 1785, 2017, 2150, 2201, 2338
NlaIV	GGNNCC	4 cut(s)	522, 1064, 1106, 1399
NmuCI	GTSAC	3 cut(s)	105, 877, 2099
NsiI	ATGCAT	1 cut(s)	1787
NspI	RCATGY	2 cut(s)	1472, 1785
OliI	CACNNNNGTG	1 cut(s)	1837
PaeI	GCATGC	1 cut(s)	1785
PciSI	GCTCTTC	1 cut(s)	1185
PcsI	WCGNNNNNNNCGW	1 cut(s)	1510
PctI	GAATGC	1 cut(s)	2400
PfoI	TCCNGGA	1 cut(s)	2007
PinAI	ACCGGT	1 cut(s)	791
PkrI	GCNGC	5 cut(s)	1663, 1666, 1759, 2041, 2044
PleI	GAGTC	4 cut(s)	210, 373, 442, 1466
PmaCI	CACGTG	1 cut(s)	8
PmlI	CACGTG	1 cut(s)	8
PpsI	GAGTC	4 cut(s)	210, 373, 442, 1466
Ppu21I	YACGTR	1 cut(s)	8
PshBI	ATTAAT	1 cut(s)	2132
Psp124BI	GAGCTC	1 cut(s)	494
Psp1406I	AACGTT	2 cut(s)	1071, 2411
Psp6I	CCWGG	5 cut(s)	1147, 1516, 1760, 2007, 2238
PspCI	CACGTG	1 cut(s)	8
PspFI	CCCAGC	1 cut(s)	1617
PspGI	CCWGG	5 cut(s)	1147, 1516, 1760, 2007, 2238
PspN4I	GGNNCC	4 cut(s)	522, 1064, 1106, 1399
PspPI	GGNCC	1 cut(s)	887
PstI	CTGCAG	3 cut(s)	886, 2044, 2352
PstNI	CAGNNNCTG	2 cut(s)	608, 890
PsuI	RGATCY	1 cut(s)	1621
PvuII	CAGCTG	1 cut(s)	1388
RsaI	GTAC	9 cut(s)	376, 943, 1064, 1399, 1415, 1770, 1797, 2144, 2170
RsaNI	GTAC	9 cut(s)	375, 942, 1063, 1398, 1414, 1769, 1796, 2143, 2169
RseI	CAYNNNNRTG	1 cut(s)	1837
SacI	GAGCTC	1 cut(s)	494
SapI	GCTCTTC	1 cut(s)	1185
SatI	GCNGC	5 cut(s)	1662, 1665, 1758, 2040, 2043
Sau3AI	GATC	8 cut(s)	49, 565, 1432, 1621, 1747, 1813, 2203, 2325
Sau96I	GGNCC	1 cut(s)	887
SchI	GAGTC	4 cut(s)	211, 374, 443, 1467
ScrFI	CCNGG	5 cut(s)	1149, 1518, 1762, 2009, 2240
SduI	GDGCHC	5 cut(s)	494, 1107, 1180, 1450, 1714
SexAI	ACCWGGT	2 cut(s)	1516, 2238
SfaNI	GCATC	5 cut(s)	541, 1587, 1795, 2222, 2296
SfcI	CTRYAG	5 cut(s)	24, 882, 1453, 2040, 2348
SmiMI	CAYNNNNRTG	1 cut(s)	1837
SmlI	CTYRAG	1 cut(s)	2222
SmoI	CTYRAG	1 cut(s)	2222
SphI	GCATGC	1 cut(s)	1785
SsiI	CCGC	4 cut(s)	1366, 2084, 2246, 2255
SspI	AATATT	1 cut(s)	334
SspMI	CTAG	5 cut(s)	134, 576, 729, 1361, 2178
SstI	GAGCTC	1 cut(s)	494
StyD4I	CCNGG	5 cut(s)	1147, 1516, 1760, 2007, 2238
StyI	CCWWGG	3 cut(s)	1326, 1463, 2177
TaaI	ACNGT	7 cut(s)	28, 263, 305, 809, 1413, 1445, 1839
TaiI	ACGT	3 cut(s)	10, 1074, 2414
TaqI	TCGA	4 cut(s)	48, 961, 1983, 2328
TaqII	GACCGA	1 cut(s)	248
TatI	WGTACW	3 cut(s)	374, 941, 2168
TseFI	GTSAC	3 cut(s)	105, 877, 2099
TseI	GCWGC	5 cut(s)	1661, 1664, 1757, 2039, 2042
Tsp45I	GTSAC	3 cut(s)	105, 877, 2099
TspGWI	ACGGA	2 cut(s)	111, 2043
Vha464I	CTTAAG	1 cut(s)	2222
VneI	GTGCAC	1 cut(s)	1446
VspI	ATTAAT	1 cut(s)	2132
XapI	RAATTY	1 cut(s)	1204
XceI	RCATGY	2 cut(s)	1472, 1785
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1758
XmaJI	CCTAGG	1 cut(s)	2177
XmiI	GTMKAC	1 cut(s)	2025
XspI	CTAG	5 cut(s)	134, 576, 729, 1361, 2178
Zsp2I	ATGCAT	1 cut(s)	1787

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.