Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001382.1

Orthogroup ID

OG0008971

Physical Location & Seq

Genomic Coordinates Reverse (-)

63340 .. 70494

Gene Structure 7155 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001382.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2733 bp

atgcgaagtcgtggctttgatggtgttgctgggccgtcagaagtggtcgttggcgtcgatcggtcatctcaggatttcatggagtcagtcgctttccggtggagcaagatagatggtatggatggtgggggccacggtggaggctcctctctgacggttgtggtgttagcggtgaagatgagggcgtgtaacgctacggcggttggttggagggtttgccaattcatgtggaacccttgcttggttgggctagggtttctcttggattctattgatctgggtgagcaaaaagaccctacagtgtgcataatttgggctatcgatcttcgcctcctaaagatggctatggggaagtattcccgagttgacggaaagaagtcactgaattgttgctcaacaaccagtctagttgtatttgttgcattttgtttagttggggtttggatgttaatgtcatcagttgttccgattcagagtcaaaacttatcaactgaggagaatctgaccgataaaagttctaagcaatatgaagacagttctggtcgattatcagaaactataacaagagaggatgacagtggcagtgattcacagagtgaaaccaatattgaaaatactcaaaatgtttcacaggacgagtctgtgagtacaagtgacgaaaaacaggaagaagtggtttcaaaggaggtttctgaggagaaagttgagtctgaaagtgagaatggtgacgagggaaatcagcaagagaagtttgtgaaggaaagctctgatgagaaaactgagagcgaagaggaaccaaagacagagaacgaaaatgatggggatgtgaaagtaaatgatcaggaagttagttccggagatggtcagtcaaactcagaagctggatcaacagaggaagcaagtggtaaaacgagtgaaaatgaacagacagaattacagggtgaaaagaaatcggagggagatgaatctgctgatgaaaagaagcaggaagaagaagttcctagtcagactgatgaggagaaggttgagaacaatcaagacaataattcagaagaaggtgataccagtaataacatggacagtgagaaggaaacagaaaagtcttcaatatctaaaactgagagtgagtatagctggaaactctgtaatgtcactgcagggcctgactacatcccttgtcttgacaattggaaaactattagaaagcttccaagtacaatgcactatgaacatcgagagaggcactgccctgaggaagcttccacctgtctcgtttctctacctgaaggatatagacggccaattcagtggccaacaagcagggaaaagatatggtaccacaacgttcctcacaccaagcttgcagtggttaaggggcaccaaaattgggttaaagttaccggtgaataccttactttccctggtggtggcactcagtttaagaatggtgctcttcactatattgattttattcaaaattctcttcctgatattgcatggggtaaaagaagccgtgtgatattggatgttgggtgtggggtagccagcttcggaggatttctatttgacagagatgttcttgccatgtcatttgctcccaaggatgagcacgaagcccaagttcaatttgcgctagagcggggtatccctgccatatcagctgttatgggtaccacaaggctaccgtacccaagttctgtgtttgatcttatccactgtgcacgctgtagagtcccttggcatgttgaaggtggtaaactgctcttggagcttaatcgtgtcttgcgacctggtggttattttgtttggtccgcaactccggtttaccaaaagcttcctgaagatgttggcatctggaaagcgatgtctgaactaactaagtcaatttgctgggatctggtggtgattaaaaaagacaagctcaatcaagtcgctgctgctatatataggaaaccatctaccaatgagtgctacaatgaaagagcacaaaatgagcctcctctttgtagtgaatctgatgatccaaatgctgcctggaaagtaccattagaggcatgcatacacaaagtacctgaggatgcatcagatcgtgggtctcaatggccaccgcagtggccatcaaggttggaaaaaccaccatactggttgaagtctcagcttgatgttaatggaaaatctgcgccagaagattttatttctgactataagcattggaagaatgttgtgtccaagacatatttgactgggatgggaatcgattggtcatctgtaaggaatgtcctggacatgagagctgtatacggagggtttgctgcagcactgaaagacttaaaagtatgggtaatgaatgtagttccgcctattgattctcgtgacacacttgcaataatctttgagcgtggattaatcggaatgtaccatgattggtgtgaatcattcagtacatatcctaggacttatgatgttgtccatgcagatcatctgttctctgtccttaagaaaagatgcaacctagtggcggtgattgcggaagtggacaggatactaaggccagaagggaagctaatcgtatgggatgatgctgaaaccttgaacgagatcgagagcatggtcaaatctctacagtgggatatccgatttacttactcaaaagacaacaagggtttgctctgcattcagaaaacgttttggcgtcctactgagcaagagacaattctatcagccattgcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005911 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009506 GO:0012505 GO:0016740 GO:0016741 GO:0030054 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

910

Amino Acids

102.03

Weight (kDa)

4.88

Isoelectric Point (pI)

48.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008971)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29470 AT1G29470 AT2G34300 AT2G34300 AT2G34300
fragaria_vesca	FvH4_2g00990 FvH4_2g00990
malus_domestica	MD05G1008600.v1.1 MD10G1006100.v1.1
prunus_persica	Prupe.8G010300_v2.0.a1
pyrus_communis	pycom10g00450
rosa_chinensis	RchiOBHm_Chr6g0251511
rosa_laevigata	RLG00000015461
rosa_multiflora	Rmu_sc0001382.1_g000020 Rmu_sc0040206.1_g000001
rosa_roxburghii	Rroxscaffold_7G00216610
rosa_rugosa	Rorug05G0502800 Rorug05G0502900
rosa_samantha	Rh6AG011600 Rh6BG010400 Rh6CG009000
rosa_wichuraiana	Rw6G001340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	1335, 1670
AccB1I	GGYRCC	3 cut(s)	1335, 1377, 1670
AccBSI	CCGCTC	1 cut(s)	1639
AccI	GTMKAC	1 cut(s)	2298
AccIII	TCCGGA	1 cut(s)	854
AciI	CCGC	8 cut(s)	170, 200, 1639, 1812, 2108, 2357, 2519, 2528
AclI	AACGTT	2 cut(s)	1344, 2684
AclWI	GGATC	3 cut(s)	892, 1902, 2015
AcoI	YGGCCR	4 cut(s)	1298, 1310, 2102, 2114
AcsI	RAATTY	1 cut(s)	1477
AcuI	CTGAAG	2 cut(s)	1305, 1860
AcyI	GRCGYC	2 cut(s)	54, 2692
AdeI	CACNNNGTG	1 cut(s)	596
AfaI	GTAC	9 cut(s)	649, 1216, 1337, 1672, 1688, 2043, 2070, 2417, 2443
AfiI	CCNNNNNNNGG	5 cut(s)	241, 340, 1387, 1427, 2518
AflII	CTTAAG	1 cut(s)	2495
AgeI	ACCGGT	1 cut(s)	1400
AgsI	TTSAA	8 cut(s)	611, 681, 1107, 1475, 1625, 1748, 2149, 2593
AjnI	CCWGG	4 cut(s)	1420, 1789, 2033, 2280
AjuI	GAANNNNNNNTTGG	4 cut(s)	33, 65, 224, 256
AleI	CACNNNNGTG	1 cut(s)	2110
Alw21I	GWGCWC	4 cut(s)	1453, 1611, 1723, 1987
Alw26I	GTCTC	4 cut(s)	1274, 2100, 2157, 2702
Alw44I	GTGCAC	1 cut(s)	1719
AlwI	GGATC	3 cut(s)	892, 1902, 2015
AlwNI	CAGNNNCTG	2 cut(s)	881, 1163
Ama87I	CYCGRG	1 cut(s)	360
Aor13HI	TCCGGA	1 cut(s)	854
AoxI	GGCC	8 cut(s)	32, 130, 1160, 1298, 1310, 2102, 2114, 2549
ApaLI	GTGCAC	1 cut(s)	1719
ApeKI	GCWGC	5 cut(s)	1934, 1937, 2030, 2312, 2315
ApoI	RAATTY	1 cut(s)	1477
AseI	ATTAAT	1 cut(s)	2405
AsiGI	ACCGGT	1 cut(s)	1400
Asp700I	GAANNNNTTC	1 cut(s)	996
Asp718I	GGTACC	2 cut(s)	1335, 1670
AspA2I	CCTAGG	1 cut(s)	2450
AspLEI	GCGC	2 cut(s)	1633, 2182
AspS9I	GGNCC	4 cut(s)	32, 130, 1160, 1809
AsuHPI	GGTGA	8 cut(s)	184, 293, 737, 953, 1070, 1415, 1915, 2533
AvaI	CYCGRG	1 cut(s)	360
AvaII	GGWCC	1 cut(s)	1809
AvrII	CCTAGG	1 cut(s)	2450
AxyI	CCTNAGG	2 cut(s)	1251, 2073
BaeGI	GKGCMC	2 cut(s)	1380, 1723
BalI	TGGCCA	3 cut(s)	1312, 2104, 2116
BanI	GGYRCC	3 cut(s)	1335, 1377, 1670
BauI	CACGAG	1 cut(s)	2370
BbsI	GAAGAC	2 cut(s)	537, 1095
Bbv12I	GWGCWC	4 cut(s)	1453, 1611, 1723, 1987
BbvI	GCAGC	5 cut(s)	1921, 1924, 2017, 2299, 2327
BccI	CCATC	9 cut(s)	14, 107, 116, 334, 812, 854, 1963, 2125, 2242
BceAI	ACGGC	4 cut(s)	19, 213, 1313, 1497
BciT130I	CCWGG	4 cut(s)	1422, 1791, 2035, 2282
BciVI	GTATCC	2 cut(s)	1655, 2535
BclI	TGATCA	1 cut(s)	838
BcoDI	GTCTC	4 cut(s)	1274, 2100, 2157, 2702
BfaI	CTAG	6 cut(s)	251, 407, 1002, 1634, 2451, 2513
BfmI	CTRYAG	5 cut(s)	297, 1155, 1726, 2313, 2621
BfrI	CTTAAG	1 cut(s)	2495
BfuI	GTATCC	2 cut(s)	1655, 2535
BisI	GCNGC	5 cut(s)	1935, 1938, 2031, 2313, 2316
BlnI	CCTAGG	1 cut(s)	2450
BlsI	GCNGC	5 cut(s)	1936, 1939, 2032, 2314, 2317
Bme1390I	CCNGG	4 cut(s)	1422, 1791, 2035, 2282
Bme18I	GGWCC	1 cut(s)	1809
BmeT110I	CYCGRG	1 cut(s)	360
BmgT120I	GGNCC	4 cut(s)	32, 130, 1160, 1809
BmiI	GGNNCC	7 cut(s)	131, 145, 233, 795, 1337, 1379, 1672
BmrFI	CCNGG	4 cut(s)	1422, 1791, 2035, 2282
BmrI	ACTGGG	1 cut(s)	2253
BmsI	GCATC	5 cut(s)	1860, 2068, 2090, 2495, 2569
BmuI	ACTGGG	1 cut(s)	2253
BpiI	GAAGAC	2 cut(s)	537, 1095
Bsa29I	ATCGAT	2 cut(s)	321, 2256
BsaBI	GATNNNNATC	1 cut(s)	2252
BsaHI	GRCGYC	2 cut(s)	54, 2692
BsaI	GGTCTC	1 cut(s)	2100
BsaJI	CCNNGG	5 cut(s)	133, 1420, 1599, 1736, 2450
BsaWI	WCCGGW	4 cut(s)	96, 854, 1400, 1819
Bsc4I	CCNNNNNNNGG	5 cut(s)	241, 340, 1387, 1427, 2518
Bse118I	RCCGGY	1 cut(s)	1400
Bse1I	ACTGG	4 cut(s)	402, 1065, 2147, 2248
Bse21I	CCTNAGG	2 cut(s)	1251, 2073
Bse3DI	GCAATG	1 cut(s)	2724
Bse8I	GATNNNNATC	1 cut(s)	2252
BseAI	TCCGGA	1 cut(s)	854
BseBI	CCWGG	4 cut(s)	1422, 1791, 2035, 2282
BseCI	ATCGAT	2 cut(s)	321, 2256
BseDI	CCNNGG	5 cut(s)	133, 1420, 1599, 1736, 2450
BseJI	GATNNNNATC	1 cut(s)	2252
BseLI	CCNNNNNNNGG	5 cut(s)	241, 340, 1387, 1427, 2518
BseMI	GCAATG	1 cut(s)	2724
BseNI	ACTGG	4 cut(s)	402, 1065, 2147, 2248
BseRI	GAGGAG	5 cut(s)	136, 509, 710, 1031, 1989
BseSI	GKGCMC	2 cut(s)	1380, 1723
BseXI	GCAGC	5 cut(s)	1921, 1924, 2017, 2299, 2327
BseYI	CCCAGC	2 cut(s)	29, 1890
Bsh1285I	CGRYCG	1 cut(s)	61
BshFI	GGCC	8 cut(s)	34, 132, 1162, 1300, 1312, 2104, 2116, 2551
BshNI	GGYRCC	3 cut(s)	1335, 1377, 1670
BshTI	ACCGGT	1 cut(s)	1400
BshVI	ATCGAT	2 cut(s)	321, 2256
BsiEI	CGRYCG	1 cut(s)	61
BsiHKAI	GWGCWC	4 cut(s)	1453, 1611, 1723, 1987
BsiHKCI	CYCGRG	1 cut(s)	360
BsiSI	CCGG	4 cut(s)	97, 855, 1401, 1820
BslFI	GGGAC	1 cut(s)	1718
BslI	CCNNNNNNNGG	5 cut(s)	241, 340, 1387, 1427, 2518
BsmAI	GTCTC	4 cut(s)	1274, 2100, 2157, 2702
BsmFI	GGGAC	1 cut(s)	1718
BsmI	GAATGC	1 cut(s)	2673
BsnI	GGCC	8 cut(s)	34, 132, 1162, 1300, 1312, 2104, 2116, 2551
Bso31I	GGTCTC	1 cut(s)	2100
BsoBI	CYCGRG	1 cut(s)	360
Bsp1286I	GDGCHC	5 cut(s)	1380, 1453, 1611, 1723, 1987
Bsp13I	TCCGGA	1 cut(s)	854
BspACI	CCGC	8 cut(s)	170, 200, 1639, 1812, 2108, 2357, 2519, 2528
BspANI	GGCC	8 cut(s)	34, 132, 1162, 1300, 1312, 2104, 2116, 2551
BspDI	ATCGAT	2 cut(s)	321, 2256
BspEI	TCCGGA	1 cut(s)	854
BspLI	GGNNCC	7 cut(s)	131, 145, 233, 795, 1337, 1379, 1672
BspMAI	CTGCAG	2 cut(s)	1159, 2317
BspPI	GGATC	3 cut(s)	892, 1902, 2015
BspQI	GCTCTTC	1 cut(s)	1458
BspT107I	GGYRCC	3 cut(s)	1335, 1377, 1670
BspTI	CTTAAG	1 cut(s)	2495
BspTNI	GGTCTC	1 cut(s)	2100
BsrBI	CCGCTC	1 cut(s)	1639
BsrDI	GCAATG	1 cut(s)	2724
BsrFI	RCCGGY	1 cut(s)	1400
BsrI	ACTGG	4 cut(s)	402, 1065, 2147, 2248
BssAI	RCCGGY	1 cut(s)	1400
BssECI	CCNNGG	5 cut(s)	133, 1420, 1599, 1736, 2450
BssNAI	GTATAC	1 cut(s)	2299
BssNI	GRCGYC	2 cut(s)	54, 2692
BssSI	CACGAG	1 cut(s)	2370
BssT1I	CCWWGG	3 cut(s)	1599, 1736, 2450
Bst1107I	GTATAC	1 cut(s)	2299
Bst2BI	CACGAG	1 cut(s)	2370
Bst2UI	CCWGG	4 cut(s)	1422, 1791, 2035, 2282
Bst4CI	ACNGT	9 cut(s)	137, 157, 301, 536, 578, 1082, 1686, 1718, 2625
Bst6I	CTCTTC	3 cut(s)	783, 1458, 1488
BstACI	GRCGYC	2 cut(s)	54, 2692
BstAFI	CTTAAG	1 cut(s)	2495
BstC8I	GCNNGC	4 cut(s)	1362, 1546, 1723, 2056
BstDSI	CCRYGG	1 cut(s)	133
BstHHI	GCGC	2 cut(s)	1633, 2182
BstMAI	GTCTC	4 cut(s)	1274, 2100, 2157, 2702
BstMCI	CGRYCG	1 cut(s)	61
BstMWI	GCNNNNNNNGC	4 cut(s)	191, 1658, 1768, 2525
BstNI	CCWGG	4 cut(s)	1422, 1791, 2035, 2282
BstNSI	RCATGY	2 cut(s)	1745, 2058
BstSCI	CCNGG	4 cut(s)	1420, 1789, 2033, 2280
BstSFI	CTRYAG	5 cut(s)	297, 1155, 1726, 2313, 2621
BstSLI	GKGCMC	2 cut(s)	1380, 1723
BstV1I	GCAGC	5 cut(s)	1921, 1924, 2017, 2299, 2327
BstV2I	GAAGAC	2 cut(s)	537, 1095
BstX2I	RGATCY	1 cut(s)	1894
BstXI	CCANNNNNNTGG	3 cut(s)	1308, 2112, 2142
BstYI	RGATCY	1 cut(s)	1894
BstZ17I	GTATAC	1 cut(s)	2299
Bsu15I	ATCGAT	2 cut(s)	321, 2256
Bsu36I	CCTNAGG	2 cut(s)	1251, 2073
BsuI	GTATCC	2 cut(s)	1655, 2535
BsuRI	GGCC	8 cut(s)	34, 132, 1162, 1300, 1312, 2104, 2116, 2551
BsuTUI	ATCGAT	2 cut(s)	321, 2256
BtgI	CCRYGG	1 cut(s)	133
BtgZI	GCGATG	1 cut(s)	1877
BtsI	GCAGTG	5 cut(s)	589, 1152, 1243, 1371, 2117
Cac8I	GCNNGC	4 cut(s)	1362, 1546, 1723, 2056
CaiI	CAGNNNCTG	2 cut(s)	881, 1163
CfoI	GCGC	2 cut(s)	1633, 2182
Cfr10I	RCCGGY	1 cut(s)	1400
Cfr13I	GGNCC	4 cut(s)	32, 130, 1160, 1809
ClaI	ATCGAT	2 cut(s)	321, 2256
CseI	GACGC	2 cut(s)	43, 2681
CsiI	ACCWGGT	1 cut(s)	1789
Csp6I	GTAC	9 cut(s)	648, 1215, 1336, 1671, 1687, 2042, 2069, 2416, 2442
CspAI	ACCGGT	1 cut(s)	1400
CspCI	CAANNNNNGTGG	2 cut(s)	209, 244
CviQI	GTAC	9 cut(s)	648, 1215, 1336, 1671, 1687, 2042, 2069, 2416, 2442
DraIII	CACNNNGTG	1 cut(s)	596
EaeI	YGGCCR	4 cut(s)	1298, 1310, 2102, 2114
Eam1104I	CTCTTC	3 cut(s)	783, 1458, 1488
EarI	CTCTTC	3 cut(s)	783, 1458, 1488
EciI	GGCGGA	1 cut(s)	2346
Eco130I	CCWWGG	3 cut(s)	1599, 1736, 2450
Eco31I	GGTCTC	1 cut(s)	2100
Eco32I	GATATC	1 cut(s)	2632
Eco47I	GGWCC	1 cut(s)	1809
Eco57I	CTGAAG	2 cut(s)	1305, 1860
Eco81I	CCTNAGG	2 cut(s)	1251, 2073
Eco88I	CYCGRG	1 cut(s)	360
EcoO109I	RGGNCCY	1 cut(s)	1160
EcoRII	CCWGG	4 cut(s)	1420, 1789, 2033, 2280
EcoRV	GATATC	1 cut(s)	2632
EcoT14I	CCWWGG	3 cut(s)	1599, 1736, 2450
EcoT22I	ATGCAT	2 cut(s)	2060, 2083
ErhI	CCWWGG	3 cut(s)	1599, 1736, 2450
FaqI	GGGAC	1 cut(s)	1718
FauI	CCCGC	1 cut(s)	1632
FbaI	TGATCA	1 cut(s)	838
FblI	GTMKAC	1 cut(s)	2298
Fnu4HI	GCNGC	5 cut(s)	1935, 1938, 2031, 2313, 2316
Fsp4HI	GCNGC	5 cut(s)	1935, 1938, 2031, 2313, 2316
FspBI	CTAG	6 cut(s)	251, 407, 1002, 1634, 2451, 2513
GlaI	GCGC	2 cut(s)	1632, 2181
GluI	GCNGC	5 cut(s)	1935, 1938, 2031, 2313, 2316
GsaI	CCCAGC	2 cut(s)	33, 1894
HaeIII	GGCC	8 cut(s)	34, 132, 1162, 1300, 1312, 2104, 2116, 2551
HapII	CCGG	4 cut(s)	97, 855, 1401, 1820
HgaI	GACGC	2 cut(s)	43, 2681
HhaI	GCGC	2 cut(s)	1633, 2182
Hin1I	GRCGYC	2 cut(s)	54, 2692
Hin6I	GCGC	2 cut(s)	1631, 2180
HinP1I	GCGC	2 cut(s)	1631, 2180
HincII	GTYRAC	1 cut(s)	367
HindII	GTYRAC	1 cut(s)	367
HindIII	AAGCTT	4 cut(s)	1205, 1257, 1358, 1832
HpaII	CCGG	4 cut(s)	97, 855, 1401, 1820
HphI	GGTGA	8 cut(s)	184, 293, 737, 953, 1070, 1415, 1915, 2533
Hpy166II	GTNNAC	6 cut(s)	367, 1721, 1757, 1825, 2299, 2536
Hpy8I	GTNNAC	6 cut(s)	367, 1721, 1757, 1825, 2299, 2536
Hpy99I	CGWCG	1 cut(s)	59
HpyAV	CCTTC	7 cut(s)	751, 1015, 1049, 1081, 1280, 1742, 2549
HpyCH4III	ACNGT	9 cut(s)	137, 157, 301, 536, 578, 1082, 1686, 1718, 2625
HpyCH4IV	ACGT	2 cut(s)	1344, 2684
HpyF10VI	GCNNNNNNNGC	4 cut(s)	191, 1658, 1768, 2525
HpySE526I	ACGT	2 cut(s)	1344, 2684
Hsp92I	GRCGYC	2 cut(s)	54, 2692
HspAI	GCGC	2 cut(s)	1631, 2180
Kpn2I	TCCGGA	1 cut(s)	854
KpnI	GGTACC	2 cut(s)	1339, 1674
Ksp22I	TGATCA	1 cut(s)	838
LguI	GCTCTTC	1 cut(s)	1458
LmnI	GCTCC	4 cut(s)	102, 149, 1600, 1768
Lsp1109I	GCAGC	5 cut(s)	1921, 1924, 2017, 2299, 2327
LweI	GCATC	5 cut(s)	1860, 2068, 2090, 2495, 2569
MabI	ACCWGGT	1 cut(s)	1789
MaeI	CTAG	6 cut(s)	251, 407, 1002, 1634, 2451, 2513
MaeII	ACGT	2 cut(s)	1344, 2684
MaeIII	GTNAC	7 cut(s)	188, 378, 653, 725, 1150, 1396, 2372
MbiI	CCGCTC	1 cut(s)	1639
MfeI	CAATTG	1 cut(s)	1186
MflI	RGATCY	1 cut(s)	1894
MhlI	GDGCHC	5 cut(s)	1380, 1453, 1611, 1723, 1987
MlsI	TGGCCA	3 cut(s)	1312, 2104, 2116
MluNI	TGGCCA	3 cut(s)	1312, 2104, 2116
MlyI	GAGTC	5 cut(s)	92, 484, 647, 716, 1740
MmeI	TCCRAC	2 cut(s)	188, 2106
Mox20I	TGGCCA	3 cut(s)	1312, 2104, 2116
Mph1103I	ATGCAT	2 cut(s)	2060, 2083
MroI	TCCGGA	1 cut(s)	854
MroXI	GAANNNNTTC	1 cut(s)	996
MscI	TGGCCA	3 cut(s)	1312, 2104, 2116
MslI	CAYNNNNRTG	1 cut(s)	2110
Msp20I	TGGCCA	3 cut(s)	1312, 2104, 2116
MspA1I	CMGCKG	1 cut(s)	1661
MspCI	CTTAAG	1 cut(s)	2495
MspI	CCGG	4 cut(s)	97, 855, 1401, 1820
MspR9I	CCNGG	4 cut(s)	1422, 1791, 2035, 2282
MunI	CAATTG	1 cut(s)	1186
Mva1269I	GAATGC	1 cut(s)	2673
MvaI	CCWGG	4 cut(s)	1422, 1791, 2035, 2282
MwoI	GCNNNNNNNGC	4 cut(s)	191, 1658, 1768, 2525
NlaIV	GGNNCC	7 cut(s)	131, 145, 233, 795, 1337, 1379, 1672
NmuCI	GTSAC	5 cut(s)	378, 653, 725, 1150, 2372
NsiI	ATGCAT	2 cut(s)	2060, 2083
NspI	RCATGY	2 cut(s)	1745, 2058
OliI	CACNNNNGTG	1 cut(s)	2110
PaeI	GCATGC	1 cut(s)	2058
PciSI	GCTCTTC	1 cut(s)	1458
PcsI	WCGNNNNNNNCGW	2 cut(s)	54, 1783
PctI	GAATGC	1 cut(s)	2673
PdmI	GAANNNNTTC	1 cut(s)	996
PfeI	GAWTC	9 cut(s)	266, 469, 499, 587, 965, 2012, 2253, 2366, 2432
PfoI	TCCNGGA	1 cut(s)	2280
PinAI	ACCGGT	1 cut(s)	1400
PkrI	GCNGC	5 cut(s)	1936, 1939, 2032, 2314, 2317
Ple19I	CGATCG	1 cut(s)	61
PleI	GAGTC	5 cut(s)	91, 483, 646, 715, 1739
PpsI	GAGTC	5 cut(s)	91, 483, 646, 715, 1739
PshBI	ATTAAT	1 cut(s)	2405
Psp1406I	AACGTT	2 cut(s)	1344, 2684
Psp6I	CCWGG	4 cut(s)	1420, 1789, 2033, 2280
PspFI	CCCAGC	2 cut(s)	29, 1890
PspGI	CCWGG	4 cut(s)	1420, 1789, 2033, 2280
PspN4I	GGNNCC	7 cut(s)	131, 145, 233, 795, 1337, 1379, 1672
PspPI	GGNCC	4 cut(s)	32, 130, 1160, 1809
PstI	CTGCAG	2 cut(s)	1159, 2317
PstNI	CAGNNNCTG	2 cut(s)	881, 1163
PsuI	RGATCY	1 cut(s)	1894
PvuI	CGATCG	1 cut(s)	61
PvuII	CAGCTG	1 cut(s)	1661
RsaI	GTAC	9 cut(s)	649, 1216, 1337, 1672, 1688, 2043, 2070, 2417, 2443
RsaNI	GTAC	9 cut(s)	648, 1215, 1336, 1671, 1687, 2042, 2069, 2416, 2442
RseI	CAYNNNNRTG	1 cut(s)	2110
SapI	GCTCTTC	1 cut(s)	1458
SatI	GCNGC	5 cut(s)	1935, 1938, 2031, 2313, 2316
Sau96I	GGNCC	4 cut(s)	32, 130, 1160, 1809
SchI	GAGTC	5 cut(s)	92, 484, 647, 716, 1740
ScrFI	CCNGG	4 cut(s)	1422, 1791, 2035, 2282
SduI	GDGCHC	5 cut(s)	1380, 1453, 1611, 1723, 1987
SexAI	ACCWGGT	1 cut(s)	1789
SfaNI	GCATC	5 cut(s)	1860, 2068, 2090, 2495, 2569
SfcI	CTRYAG	5 cut(s)	297, 1155, 1726, 2313, 2621
SinI	GGWCC	1 cut(s)	1809
SmiMI	CAYNNNNRTG	1 cut(s)	2110
SmlI	CTYRAG	1 cut(s)	2495
SmoI	CTYRAG	1 cut(s)	2495
SphI	GCATGC	1 cut(s)	2058
SsiI	CCGC	8 cut(s)	170, 200, 1639, 1812, 2108, 2357, 2519, 2528
SspI	AATATT	1 cut(s)	607
SspMI	CTAG	6 cut(s)	251, 407, 1002, 1634, 2451, 2513
StyD4I	CCNGG	4 cut(s)	1420, 1789, 2033, 2280
StyI	CCWWGG	3 cut(s)	1599, 1736, 2450
TaaI	ACNGT	9 cut(s)	137, 157, 301, 536, 578, 1082, 1686, 1718, 2625
TaiI	ACGT	2 cut(s)	1347, 2687
TaqI	TCGA	6 cut(s)	57, 321, 544, 1234, 2256, 2601
TaqII	GACCGA	2 cut(s)	51, 521
TatI	WGTACW	3 cut(s)	647, 1214, 2441
TfiI	GAWTC	9 cut(s)	266, 469, 499, 587, 965, 2012, 2253, 2366, 2432
TseFI	GTSAC	5 cut(s)	378, 653, 725, 1150, 2372
TseI	GCWGC	5 cut(s)	1934, 1937, 2030, 2312, 2315
Tsp45I	GTSAC	5 cut(s)	378, 653, 725, 1150, 2372
TspDTI	ATGAA	9 cut(s)	67, 214, 543, 936, 978, 990, 1242, 1992, 2360
TspGWI	ACGGA	2 cut(s)	384, 2316
Vha464I	CTTAAG	1 cut(s)	2495
VneI	GTGCAC	1 cut(s)	1719
VpaK11BI	GGWCC	1 cut(s)	1809
VspI	ATTAAT	1 cut(s)	2405
XapI	RAATTY	1 cut(s)	1477
XceI	RCATGY	2 cut(s)	1745, 2058
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1072, 1363, 2031
XmaJI	CCTAGG	1 cut(s)	2450
XmiI	GTMKAC	1 cut(s)	2298
XmnI	GAANNNNTTC	1 cut(s)	996
XspI	CTAG	6 cut(s)	251, 407, 1002, 1634, 2451, 2513
Zsp2I	ATGCAT	2 cut(s)	2060, 2083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.