Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0008939

Physical Location & Seq

Genomic Coordinates Forward (+)

15471808 .. 15474660

Gene Structure 2853 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1073600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2853 bp

ATGGCTCCACCTCTCCTCTCGCCCACGGTCTCAGGTTGCTGCTTTCTTCTCCTCTCCTTCCTCATCTCTTCGTTTCCCGCTCCCTCCTTCGCCCTAACTGATGCTGAAGCCGCTCACATAGCCCACCGCCAGCTCATTTCTCTCCCGGAGAATGGCGACCTCCCTGACAACTACGAGGTTCAAGTCGACGTCAAACTAAAGTTTGAAAACGACAGGCTCAAGAGGGCTTATGTCGCTCTCCAGGCACAGAAGAGCGCTATTTTTTCCGACCCTTTTAAATTCACTGCCAACTGGGAAGGGGAGAATGTGTGCGCCTACAAAGGGGTGTTCTGCGCTCCAGCACTCGACGACTCGAGCTTGAATGTGGTGGCCGGCATAGACCTCAACCATGGAGACATTGCAGGACATCTCGTTGTCGAAATGGGGCTCCTTACCGACCTCGCACTCTTCCACATCAACTCCAATAGGTTCTGCGGCATCATCCCAGAGAGCTTCAGGAGGCTGACGCTCATGTATGAGTTCGACATCAGCAACAACCGATTTGTTGGTCGTTTTCCTGGAGTTGTCCTCCACTGGCCTAATTGCAAGTACCTTGACCTTCGGTTCAATGGCTTCGAAGGCGAGCTGCCTCCGGAGCTTTTCTTCAAGGAGTTTGATGCCATTTTCTTGAACCACAACCGATTCACATCGGCGATTCCAGAGACGATTGGAAACTCCAAGGTTTCTGTTGTGTCATTTGCGTTTAACAACTTCAGTGGTTGCATTCCGCATAGCGTTGGAAACATGCACAACGTGAACGAGCTAATCTTCATGAACAACCAGCTTGGTGGGTGCTTCCCTCCTGAGATTGGAAACCTAGGAAACTTGCAGGTTTTTGATGTGTGCTACAATGGATTTATAGGTTCTTTGCCAAAGAGCTTCGTCGGGCTGCAGAGCATTGAGGAATTGGGTATTGGGTACAACAGGTTGACAGGGTTTGTGACTGATAAGATTTGCACGTTGCCTAAGTTGGCAAATTTCACATTTGCTTACAACTATTTTAGTGGGGAGGCTCAAAACTGTATGCCAAATCCTAAATCGAAAATAGTCTTAGATGACTCAGGCAATTGCATGCCAGGAAGGCCCAAGCAAAAGAACACAAAGACATGTTTCCCTGTGGTAACTAAGCCTGTGGATTGCAGCAAGAATTGTGGTGGTTCTTCTACACCAGAGAAACCTAAGACACCAAAGCCTCCAACGCCAAAGGTTAGTCCACCACCGACGCCAAAGGTAGAGCCGCCACCCACATCGAAGGTCGAGCCCCCACCACCAACACCGAAGGCCAAGCCGCCACCTTCCACACCGAAGGTCGAGCCACCACCCACCCCCAAGGTTGAGCCACCACCCACTCCAAAGGCAGAGCCACCTTCCACGCCAAAGGTTGAGCCACCACCCACTCCAAAGGTTGAGCCACCTCCCATGCCAAAGGTTGAACCACCACCCACCACTAAGGTTGAGCCACCACCCACCCCTAAGGCCGAGCCACCACCCACACCAAAGGTTAAACCACCTCCCACGCCAAAGGCCGAGGCGCCAAAGGTCCAACCACCACCCACCCCTAAGGCTGAGCCACCACCTACCCCTAAGGATGAGCCACCTCCCATGGCAAAGGTTGAACCACCACCCACCCCTAAAGCCGAGCCACCACCCACCCCAAAGGCTGAGCCACCACCCGAGCCAAAGGCCGAGGCACCAAAGATCCAAACACCACCCATCCCTAAGGCTGAGCCACCACCTACCCCTAAGGCTGAGCCACCTACGACGCCAAAGGTTGAGCCGCCACCTGAGCCAAAGGCCGAGCCACCTCCTACACCTAAAGCTGAGCCACCTTTTGCACCTAAAGCTGATCCACCTCCCGCACCTAAAGCGGAGCCACCTCCAATAGCTAAGCCGGAACCTCCTCAAACACCAAAAGTTGAGCCACCGCCAATGCCACAGGCTGAGCTACCCCAAACACCAGAGGCTGAGCCACCCCAAACACCTGAGGTTGTGCCACCCCAAGCATCTGAGGTTGAGCCACCCCAAGCACCTGAGGTCGAGCCACCTGCTGCACCAAAGGTTGAGCCACCTCCAACACCAAAGGTCGAGCAACCACCAACACCTAAGGCTGAGCCACCTCCAACGCCGGAGGTGGAGCCTCCTAAAGCACCAGAGGTTGAGCCACCAATACTCACACCTGCACCAAGCCCGATTGGCCGTAGCCCTAAAGGTCCTCCGTTGTTTCCAATTCAACCACCATCAACGCCAGAACCTGTGCAATCTCCTCCATCACCATCTCCAACACCAGAACCATCTCCAGAGCTTGTGCAGTCACCACCACCAGTCCAGTCACCACCACCACCTGTCCAATCCCCTCCACCGCCAATTCAATCTCCACCACCACCTGTCCAGTCTCCACCACCACCACCAATTCAATCCCCACCACCGCCTGTCGAATCTCCCCCACCACCAATTGAATCCCCCCCACCACCAGTCGAATCCCCGCCACCGCCGATCGAATCCCCACCACCACCAGTCGAATCCCCGCCACCGCCGATCGAATCCCCACCACCCCCAGTCGAATCCCCTCCACAGCCGATCGAATCCCCACCATCGCCGGTCGAATCTCCCCCGCCGCCTGTCCAATCCCCACCACCACCAGTCCAATCCCCACCACCGCCAATCGAATCACCTTCTCCCCCAGCTCCAACTCCATCTCCTCATTTGCCTCCTCCTGTGGAGTCTCCACCACCAACCCAACCAGACTTCGTGCTACCACCAAACATTGGAGCACTATACTCATCGCCACCACCACCAATGTTCCCAGGCTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005198 GO:0005199 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0016043 GO:0016049 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0060560 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8

Protein Analysis

951

Amino Acids

101.14

Weight (kDa)

5.09

Isoelectric Point (pI)

88.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008939)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15880 AT4G33970
fragaria_vesca	FvH4_2g07100
malus_domestica	MD05G1073600.v1.1 MD10G1087900.v1.1
prunus_persica	Prupe.8G113900_v2.0.a1 Prupe.8G113900_v2.0.a1
pyrus_communis	pycom05g06560 pycom10g07010
rosa_chinensis	RchiOBHm_Chr6g0259591
rosa_laevigata	RLG00000014519
rosa_multiflora	Rmu_co8277385.1_g000001 Rmu_sc0000536.1_g000035 Rmu_ssc0000050.1_g000009
rosa_roxburghii	Rroxscaffold_7G00206910
rosa_rugosa	Rorug05G0589800 Rorug05G0589900
rosa_samantha	Rh6AG106000 Rh6BG100400 Rh6CG094900 Rh6DG089000
rosa_wichuraiana	Rw6G009150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	2092, 2224
AatII	GACGTC	1 cut(s)	192
Acc36I	ACCTGC	3 cut(s)	859, 2092, 2224
AccB1I	GGYRCC	2 cut(s)	1570, 1729
AccB7I	CCANNNNNTGG	1 cut(s)	2804
AccBSI	CCGCTC	2 cut(s)	80, 113
AccI	GTMKAC	1 cut(s)	186
AccIII	TCCGGA	1 cut(s)	631
AclWI	GGATC	2 cut(s)	1732, 1880
AcoI	YGGCCR	2 cut(s)	369, 2233
AcsI	RAATTY	2 cut(s)	278, 1015
AcuI	CTGAAG	3 cut(s)	126, 478, 736
AcyI	GRCGYC	4 cut(s)	189, 1262, 1571, 1802
AdeI	CACNNNGTG	1 cut(s)	793
AfaI	GTAC	2 cut(s)	590, 959
AfeI	AGCGCT	1 cut(s)	256
AfiI	CCNNNNNNNGG	4 cut(s)	152, 321, 848, 2804
AflIII	ACRYGT	1 cut(s)	1145
AjnI	CCWGG	4 cut(s)	240, 556, 1114, 2842
AjuI	GAANNNNNNNTTGG	2 cut(s)	936, 968
Alw21I	GWGCWC	1 cut(s)	2812
Alw26I	GTCTC	5 cut(s)	34, 387, 695, 2436, 2766
AlwI	GGATC	2 cut(s)	1732, 1880
AlwNI	CAGNNNCTG	2 cut(s)	2003, 2291
Ama87I	CYCGRG	2 cut(s)	352, 1712
Aor13HI	TCCGGA	1 cut(s)	631
Aor51HI	AGCGCT	1 cut(s)	256
AoxI	GGCC	9 cut(s)	369, 575, 1121, 1320, 1515, 1563, 1722, 1833, 2233
ApeKI	GCWGC	5 cut(s)	39, 625, 928, 1179, 2087
ApoI	RAATTY	2 cut(s)	278, 1015
AspA2I	CCTAGG	1 cut(s)	856
AspLEI	GCGC	4 cut(s)	257, 314, 335, 1573
AspS9I	GGNCC	3 cut(s)	1122, 1579, 2249
AsuC2I	CCSGG	1 cut(s)	146
AsuHPI	GGTGA	4 cut(s)	2301, 2343, 2361, 2700
AsuII	TTCGAA	1 cut(s)	615
AvaI	CYCGRG	2 cut(s)	352, 1712
AvaII	GGWCC	2 cut(s)	1579, 2249
AvrII	CCTAGG	1 cut(s)	856
AxyI	CCTNAGG	8 cut(s)	1512, 1599, 1623, 1758, 1782, 2022, 2070, 2142
BanI	GGYRCC	2 cut(s)	1570, 1729
BanII	GRGCYC	2 cut(s)	429, 1302
Bbv12I	GWGCWC	1 cut(s)	2812
BbvI	GCAGC	5 cut(s)	26, 612, 915, 1191, 2074
BccI	CCATC	7 cut(s)	1760, 2284, 2314, 2320, 2338, 2638, 2740
BceAI	ACGGC	1 cut(s)	2220
BcgI	CGANNNNNNTGC	2 cut(s)	2066, 2100
BciT130I	CCWGG	4 cut(s)	242, 558, 1116, 2844
BcnI	CCSGG	1 cut(s)	146
BcoDI	GTCTC	5 cut(s)	34, 387, 695, 2436, 2766
BfaI	CTAG	1 cut(s)	857
BfmI	CTRYAG	1 cut(s)	929
BfoI	RGCGCY	2 cut(s)	258, 1574
BfuAI	ACCTGC	3 cut(s)	859, 2092, 2224
BglI	GCCNNNNNGGC	2 cut(s)	1120, 2232
BlnI	CCTAGG	1 cut(s)	856
BlpI	GCTNAGC	9 cut(s)	1605, 1701, 1764, 1788, 1860, 1926, 1980, 2004, 2148
Bme1390I	CCNGG	5 cut(s)	146, 242, 558, 1116, 2844
Bme18I	GGWCC	2 cut(s)	1579, 2249
BmeT110I	CYCGRG	2 cut(s)	352, 1712
BmgT120I	GGNCC	3 cut(s)	1122, 1579, 2249
BmiI	GGNNCC	7 cut(s)	6, 428, 1572, 1731, 1911, 1935, 2175
BmrFI	CCNGG	5 cut(s)	146, 242, 558, 1116, 2844
BmrI	ACTGGG	2 cut(s)	301, 2588
BmsI	GCATC	4 cut(s)	91, 486, 646, 2051
BmuI	ACTGGG	2 cut(s)	301, 2588
BplI	GAGNNNNNCTC	2 cut(s)	552, 584
BpmI	CTGGAG	4 cut(s)	224, 321, 579, 2319
Bpu10I	CCTNAGC	1 cut(s)	1824
Bpu1102I	GCTNAGC	9 cut(s)	1605, 1701, 1764, 1788, 1860, 1926, 1980, 2004, 2148
Bpu14I	TTCGAA	1 cut(s)	615
BpuEI	CTTGAG	1 cut(s)	203
BpuMI	CCSGG	1 cut(s)	146
BsaBI	GATNNNNATC	1 cut(s)	685
BsaHI	GRCGYC	4 cut(s)	189, 1262, 1571, 1802
BsaI	GGTCTC	1 cut(s)	34
BsaJI	CCNNGG	9 cut(s)	24, 388, 717, 856, 1368, 1566, 1641, 1725, 2842
BsaWI	WCCGGW	1 cut(s)	631
BsaXI	ACNNNNNCTCC	6 cut(s)	293, 323, 443, 473, 2719, 2749
Bsc4I	CCNNNNNNNGG	4 cut(s)	152, 321, 848, 2804
Bse118I	RCCGGY	2 cut(s)	371, 2635
Bse1I	ACTGG	9 cut(s)	296, 578, 2360, 2365, 2428, 2510, 2552, 2594, 2678
Bse21I	CCTNAGG	8 cut(s)	1512, 1599, 1623, 1758, 1782, 2022, 2070, 2142
Bse3DI	GCAATG	1 cut(s)	396
Bse8I	GATNNNNATC	1 cut(s)	685
BseAI	TCCGGA	1 cut(s)	631
BseBI	CCWGG	4 cut(s)	242, 558, 1116, 2844
BseDI	CCNNGG	9 cut(s)	24, 388, 717, 856, 1368, 1566, 1641, 1725, 2842
BseGI	GGATG	3 cut(s)	480, 1633, 1752
BseJI	GATNNNNATC	1 cut(s)	685
BseLI	CCNNNNNNNGG	4 cut(s)	152, 321, 848, 2804
BseMI	GCAATG	1 cut(s)	396
BseNI	ACTGG	9 cut(s)	296, 578, 2360, 2365, 2428, 2510, 2552, 2594, 2678
BseRI	GAGGAG	6 cut(s)	5, 41, 1929, 2292, 2727, 2739
BseXI	GCAGC	5 cut(s)	26, 612, 915, 1191, 2074
BseYI	CCCAGC	1 cut(s)	2719
BsgI	GTGCAG	3 cut(s)	2073, 2202, 2366
Bsh1285I	CGRYCG	4 cut(s)	2535, 2577, 2619, 2640
BshFI	GGCC	9 cut(s)	371, 577, 1123, 1322, 1517, 1565, 1724, 1835, 2235
BshNI	GGYRCC	2 cut(s)	1570, 1729
BsiEI	CGRYCG	4 cut(s)	2535, 2577, 2619, 2640
BsiHKAI	GWGCWC	1 cut(s)	2812
BsiHKCI	CYCGRG	2 cut(s)	352, 1712
BsiSI	CCGG	6 cut(s)	146, 372, 632, 1931, 2165, 2636
BslI	CCNNNNNNNGG	4 cut(s)	152, 321, 848, 2804
BsmAI	GTCTC	5 cut(s)	34, 387, 695, 2436, 2766
BsmBI	CGTCTC	1 cut(s)	695
BsmI	GAATGC	1 cut(s)	762
BsnI	GGCC	9 cut(s)	371, 577, 1123, 1322, 1517, 1565, 1724, 1835, 2235
Bso31I	GGTCTC	1 cut(s)	34
BsoBI	CYCGRG	2 cut(s)	352, 1712
Bsp119I	TTCGAA	1 cut(s)	615
Bsp1286I	GDGCHC	3 cut(s)	429, 1302, 2812
Bsp13I	TCCGGA	1 cut(s)	631
Bsp143I	GATC	5 cut(s)	1737, 1885, 2532, 2574, 2616
Bsp1720I	GCTNAGC	9 cut(s)	1605, 1701, 1764, 1788, 1860, 1926, 1980, 2004, 2148
Bsp19I	CCATGG	2 cut(s)	388, 1641
BspANI	GGCC	9 cut(s)	371, 577, 1123, 1322, 1517, 1565, 1724, 1835, 2235
BspEI	TCCGGA	1 cut(s)	631
BspHI	TCATGA	1 cut(s)	810
BspLI	GGNNCC	7 cut(s)	6, 428, 1572, 1731, 1911, 1935, 2175
BspMAI	CTGCAG	1 cut(s)	933
BspMI	ACCTGC	3 cut(s)	859, 2092, 2224
BspPI	GGATC	2 cut(s)	1732, 1880
BspQI	GCTCTTC	1 cut(s)	245
BspT104I	TTCGAA	1 cut(s)	615
BspT107I	GGYRCC	2 cut(s)	1570, 1729
BspTNI	GGTCTC	1 cut(s)	34
BsrBI	CCGCTC	2 cut(s)	80, 113
BsrDI	GCAATG	1 cut(s)	396
BsrFI	RCCGGY	2 cut(s)	371, 2635
BsrI	ACTGG	9 cut(s)	296, 578, 2360, 2365, 2428, 2510, 2552, 2594, 2678
BssAI	RCCGGY	2 cut(s)	371, 2635
BssECI	CCNNGG	9 cut(s)	24, 388, 717, 856, 1368, 1566, 1641, 1725, 2842
BssMI	GATC	5 cut(s)	1737, 1885, 2532, 2574, 2616
BssNI	GRCGYC	4 cut(s)	189, 1262, 1571, 1802
BssT1I	CCWWGG	5 cut(s)	388, 717, 856, 1368, 1641
Bst2UI	CCWGG	4 cut(s)	242, 558, 1116, 2844
Bst4CI	ACNGT	2 cut(s)	28, 1061
Bst6I	CTCTTC	3 cut(s)	73, 245, 452
BstACI	GRCGYC	4 cut(s)	189, 1262, 1571, 1802
BstBI	TTCGAA	1 cut(s)	615
BstC8I	GCNNGC	4 cut(s)	131, 373, 623, 1112
BstDSI	CCRYGG	3 cut(s)	24, 388, 1641
BstF5I	GGATG	3 cut(s)	480, 1633, 1752
BstH2I	RGCGCY	2 cut(s)	258, 1574
BstHHI	GCGC	4 cut(s)	257, 314, 335, 1573
BstKTI	GATC	5 cut(s)	1740, 1888, 2535, 2577, 2619
BstMAI	GTCTC	5 cut(s)	34, 387, 695, 2436, 2766
BstMBI	GATC	5 cut(s)	1737, 1885, 2532, 2574, 2616
BstMCI	CGRYCG	4 cut(s)	2535, 2577, 2619, 2640
BstNI	CCWGG	4 cut(s)	242, 558, 1116, 2844
BstNSI	RCATGY	3 cut(s)	787, 1114, 1149
BstSCI	CCNGG	5 cut(s)	144, 240, 556, 1114, 2842
BstSFI	CTRYAG	1 cut(s)	929
BstV1I	GCAGC	5 cut(s)	26, 612, 915, 1191, 2074
BstX2I	RGATCY	1 cut(s)	1737
BstXI	CCANNNNNNTGG	1 cut(s)	827
BstYI	RGATCY	1 cut(s)	1737
Bsu36I	CCTNAGG	8 cut(s)	1512, 1599, 1623, 1758, 1782, 2022, 2070, 2142
BsuRI	GGCC	9 cut(s)	371, 577, 1123, 1322, 1517, 1565, 1724, 1835, 2235
BtgI	CCRYGG	3 cut(s)	24, 388, 1641
BtgZI	GCGATG	2 cut(s)	2616, 2805
BtsCI	GGATG	3 cut(s)	480, 1633, 1752
BtsI	GCAGTG	1 cut(s)	282
BtsIMutI	CAGTG	3 cut(s)	282, 571, 760
BveI	ACCTGC	3 cut(s)	859, 2092, 2224
Cac8I	GCNNGC	4 cut(s)	131, 373, 623, 1112
CaiI	CAGNNNCTG	2 cut(s)	2003, 2291
CciI	TCATGA	1 cut(s)	810
CfoI	GCGC	4 cut(s)	257, 314, 335, 1573
Cfr10I	RCCGGY	2 cut(s)	371, 2635
Cfr13I	GGNCC	3 cut(s)	1122, 1579, 2249
CseI	GACGC	3 cut(s)	514, 1270, 1810
Csp6I	GTAC	2 cut(s)	589, 958
CspCI	CAANNNNNGTGG	6 cut(s)	736, 771, 1171, 1206, 1474, 1509
CviAII	CATG	8 cut(s)	389, 511, 784, 811, 1111, 1146, 1459, 1642
CviQI	GTAC	2 cut(s)	589, 958
DinI	GGCGCC	1 cut(s)	1572
DpnI	GATC	5 cut(s)	1739, 1887, 2534, 2576, 2618
DpnII	GATC	5 cut(s)	1737, 1885, 2532, 2574, 2616
DraI	TTTAAA	1 cut(s)	277
DraIII	CACNNNGTG	1 cut(s)	793
EaeI	YGGCCR	2 cut(s)	369, 2233
Eam1104I	CTCTTC	3 cut(s)	73, 245, 452
EarI	CTCTTC	3 cut(s)	73, 245, 452
Eco130I	CCWWGG	5 cut(s)	388, 717, 856, 1368, 1641
Eco24I	GRGCYC	2 cut(s)	429, 1302
Eco31I	GGTCTC	1 cut(s)	34
Eco47I	GGWCC	2 cut(s)	1579, 2249
Eco47III	AGCGCT	1 cut(s)	256
Eco57I	CTGAAG	3 cut(s)	126, 478, 736
Eco81I	CCTNAGG	8 cut(s)	1512, 1599, 1623, 1758, 1782, 2022, 2070, 2142
Eco88I	CYCGRG	2 cut(s)	352, 1712
EcoO109I	RGGNCCY	1 cut(s)	2249
EcoRII	CCWGG	4 cut(s)	240, 556, 1114, 2842
EcoT14I	CCWWGG	5 cut(s)	388, 717, 856, 1368, 1641
EcoT38I	GRGCYC	2 cut(s)	429, 1302
EgeI	GGCGCC	1 cut(s)	1572
EheI	GGCGCC	1 cut(s)	1572
ErhI	CCWWGG	5 cut(s)	388, 717, 856, 1368, 1641
Esp3I	CGTCTC	1 cut(s)	695
FaeI	CATG	8 cut(s)	392, 514, 787, 814, 1114, 1149, 1462, 1645
FatI	CATG	8 cut(s)	388, 510, 783, 810, 1110, 1145, 1458, 1641
FauI	CCCGC	5 cut(s)	85, 1903, 2529, 2571, 2658
FblI	GTMKAC	1 cut(s)	186
FokI	GGATG	3 cut(s)	467, 1640, 1739
FriOI	GRGCYC	2 cut(s)	429, 1302
FspBI	CTAG	1 cut(s)	857
GlaI	GCGC	4 cut(s)	256, 313, 334, 1572
GsaI	CCCAGC	1 cut(s)	2723
GsuI	CTGGAG	4 cut(s)	224, 321, 579, 2319
HaeII	RGCGCY	2 cut(s)	258, 1574
HaeIII	GGCC	9 cut(s)	371, 577, 1123, 1322, 1517, 1565, 1724, 1835, 2235
HapII	CCGG	6 cut(s)	146, 372, 632, 1931, 2165, 2636
HgaI	GACGC	3 cut(s)	514, 1270, 1810
HhaI	GCGC	4 cut(s)	257, 314, 335, 1573
Hin1I	GRCGYC	4 cut(s)	189, 1262, 1571, 1802
Hin1II	CATG	8 cut(s)	392, 514, 787, 814, 1114, 1149, 1462, 1645
Hin6I	GCGC	4 cut(s)	255, 312, 333, 1571
HinP1I	GCGC	4 cut(s)	255, 312, 333, 1571
HincII	GTYRAC	2 cut(s)	187, 969
HindII	GTYRAC	2 cut(s)	187, 969
HpaII	CCGG	6 cut(s)	146, 372, 632, 1931, 2165, 2636
HphI	GGTGA	4 cut(s)	2301, 2343, 2361, 2700
Hpy166II	GTNNAC	4 cut(s)	187, 796, 969, 1253
Hpy188I	TCNGA	2 cut(s)	268, 2047
Hpy188III	TCNNGA	8 cut(s)	220, 496, 632, 667, 698, 811, 842, 2336
Hpy8I	GTNNAC	4 cut(s)	187, 796, 969, 1253
Hpy99I	CGWCG	5 cut(s)	191, 350, 926, 1264, 1804
HpyCH4III	ACNGT	2 cut(s)	28, 1061
HpyCH4IV	ACGT	3 cut(s)	189, 792, 998
HpySE526I	ACGT	3 cut(s)	189, 792, 998
Hsp92I	GRCGYC	4 cut(s)	189, 1262, 1571, 1802
Hsp92II	CATG	8 cut(s)	392, 514, 787, 814, 1114, 1149, 1462, 1645
HspAI	GCGC	4 cut(s)	255, 312, 333, 1571
KasI	GGCGCC	1 cut(s)	1570
Kpn2I	TCCGGA	1 cut(s)	631
KroI	GCCGGC	1 cut(s)	371
KroNI	GCCGGC	1 cut(s)	373
Kzo9I	GATC	5 cut(s)	1737, 1885, 2532, 2574, 2616
LguI	GCTCTTC	1 cut(s)	245
LmnI	GCTCC	9 cut(s)	10, 85, 340, 432, 634, 1909, 2173, 2728, 2807
Lsp1109I	GCAGC	5 cut(s)	26, 612, 915, 1191, 2074
LweI	GCATC	4 cut(s)	91, 486, 646, 2051
MaeI	CTAG	1 cut(s)	857
MaeII	ACGT	3 cut(s)	189, 792, 998
MaeIII	GTNAC	4 cut(s)	979, 1159, 2349, 2367
MalI	GATC	5 cut(s)	1739, 1887, 2534, 2576, 2618
MbiI	CCGCTC	2 cut(s)	80, 113
MboI	GATC	5 cut(s)	1737, 1885, 2532, 2574, 2616
MboII	GAAGA	7 cut(s)	38, 60, 262, 439, 634, 799, 1191
MfeI	CAATTG	2 cut(s)	1105, 2490
MflI	RGATCY	1 cut(s)	1737
MhlI	GDGCHC	3 cut(s)	429, 1302, 2812
Mly113I	GGCGCC	1 cut(s)	1571
MlyI	GAGTC	3 cut(s)	344, 1091, 2768
MmeI	TCCRAC	8 cut(s)	291, 757, 1259, 1606, 2135, 2183, 2342, 2750
MroI	TCCGGA	1 cut(s)	631
MroNI	GCCGGC	1 cut(s)	371
MseI	TTAA	3 cut(s)	276, 744, 1542
MspI	CCGG	6 cut(s)	146, 372, 632, 1931, 2165, 2636
MspR9I	CCNGG	5 cut(s)	146, 242, 558, 1116, 2844
MunI	CAATTG	2 cut(s)	1105, 2490
Mva1269I	GAATGC	1 cut(s)	762
MvaI	CCWGG	4 cut(s)	242, 558, 1116, 2844
NaeI	GCCGGC	1 cut(s)	373
NarI	GGCGCC	1 cut(s)	1571
NciI	CCSGG	1 cut(s)	146
NcoI	CCATGG	2 cut(s)	388, 1641
NdeII	GATC	5 cut(s)	1737, 1885, 2532, 2574, 2616
NgoMIV	GCCGGC	1 cut(s)	371
NlaIII	CATG	8 cut(s)	392, 514, 787, 814, 1114, 1149, 1462, 1645
NlaIV	GGNNCC	7 cut(s)	6, 428, 1572, 1731, 1911, 1935, 2175
NmeAIII	GCCGAG	5 cut(s)	1543, 1591, 1702, 1750, 1861
NmuCI	GTSAC	3 cut(s)	979, 2349, 2367
NspI	RCATGY	3 cut(s)	787, 1114, 1149
NspV	TTCGAA	1 cut(s)	615
PaeI	GCATGC	1 cut(s)	1114
PaeR7I	CTCGAG	1 cut(s)	352
PagI	TCATGA	1 cut(s)	810
PaqCI	CACCTGC	2 cut(s)	2092, 2224
PciI	ACATGT	1 cut(s)	1145
PciSI	GCTCTTC	1 cut(s)	245
PctI	GAATGC	1 cut(s)	762
PdiI	GCCGGC	1 cut(s)	373
PflMI	CCANNNNNTGG	1 cut(s)	2804
PfoI	TCCNGGA	2 cut(s)	144, 556
Ple19I	CGATCG	3 cut(s)	2535, 2577, 2619
PleI	GAGTC	3 cut(s)	344, 1091, 2767
PluTI	GGCGCC	1 cut(s)	1574
PpsI	GAGTC	3 cut(s)	344, 1091, 2767
PpuMI	RGGWCCY	1 cut(s)	2249
PscI	ACATGT	1 cut(s)	1145
Psp5II	RGGWCCY	1 cut(s)	2249
Psp6I	CCWGG	4 cut(s)	240, 556, 1114, 2842
PspFI	CCCAGC	1 cut(s)	2719
PspGI	CCWGG	4 cut(s)	240, 556, 1114, 2842
PspN4I	GGNNCC	7 cut(s)	6, 428, 1572, 1731, 1911, 1935, 2175
PspPI	GGNCC	3 cut(s)	1122, 1579, 2249
PspPPI	RGGWCCY	1 cut(s)	2249
PspXI	VCTCGAGB	1 cut(s)	352
PstI	CTGCAG	1 cut(s)	933
PstNI	CAGNNNCTG	2 cut(s)	2003, 2291
PsuI	RGATCY	1 cut(s)	1737
PvuI	CGATCG	3 cut(s)	2535, 2577, 2619
RsaI	GTAC	2 cut(s)	590, 959
RsaNI	GTAC	2 cut(s)	589, 958
SalI	GTCGAC	1 cut(s)	185
SapI	GCTCTTC	1 cut(s)	245
SaqAI	TTAA	3 cut(s)	276, 744, 1542
Sau3AI	GATC	5 cut(s)	1737, 1885, 2532, 2574, 2616
Sau96I	GGNCC	3 cut(s)	1122, 1579, 2249
SchI	GAGTC	3 cut(s)	344, 1091, 2768
ScrFI	CCNGG	5 cut(s)	146, 242, 558, 1116, 2844
SduI	GDGCHC	3 cut(s)	429, 1302, 2812
SfaNI	GCATC	4 cut(s)	91, 486, 646, 2051
SfcI	CTRYAG	1 cut(s)	929
SfoI	GGCGCC	1 cut(s)	1572
Sfr274I	CTCGAG	1 cut(s)	352
SfuI	TTCGAA	1 cut(s)	615
SinI	GGWCC	2 cut(s)	1579, 2249
SlaI	CTCGAG	1 cut(s)	352
SmlI	CTYRAG	2 cut(s)	218, 352
SmoI	CTYRAG	2 cut(s)	218, 352
SphI	GCATGC	1 cut(s)	1114
SspDI	GGCGCC	1 cut(s)	1570
SspMI	CTAG	1 cut(s)	857
StyD4I	CCNGG	5 cut(s)	144, 240, 556, 1114, 2842
StyI	CCWWGG	5 cut(s)	388, 717, 856, 1368, 1641
TaaI	ACNGT	2 cut(s)	28, 1061
TaiI	ACGT	3 cut(s)	192, 795, 1001
TauI	GCSGC	6 cut(s)	113, 477, 1279, 1330, 1819, 2656
Tru1I	TTAA	3 cut(s)	276, 744, 1542
Tru9I	TTAA	3 cut(s)	276, 744, 1542
TscAI	CASTG	3 cut(s)	289, 578, 760
TseFI	GTSAC	3 cut(s)	979, 2349, 2367
TseI	GCWGC	5 cut(s)	39, 625, 928, 1179, 2087
Tsp45I	GTSAC	3 cut(s)	979, 2349, 2367
TspDTI	ATGAA	2 cut(s)	799, 827
TspGWI	ACGGA	1 cut(s)	2244
TspRI	CASTG	3 cut(s)	289, 578, 760
Van91I	CCANNNNNTGG	1 cut(s)	2804
VpaK11BI	GGWCC	2 cut(s)	1579, 2249
XapI	RAATTY	2 cut(s)	278, 1015
XceI	RCATGY	3 cut(s)	787, 1114, 1149
XhoI	CTCGAG	1 cut(s)	352
XmaJI	CCTAGG	1 cut(s)	856
XmiI	GTMKAC	1 cut(s)	186
XspI	CTAG	1 cut(s)	857
ZraI	GACGTC	1 cut(s)	190

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.