No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G34780 AT2G34780 AT2G34780 AT2G34780 |
| fragaria_vesca | FvH4_3g10781 FvH4_3g10781 |
| malus_domestica | MD05G1268800.v1.1 MD10G1247500.v1.1 |
| prunus_persica | Prupe.4G095800_v2.0.a1 |
| pyrus_communis | pycom05g25180 pycom10g20530 |
| rosa_chinensis | RchiOBHm_Chr5g0017511 |
| rosa_laevigata | RLG00000032295 |
| rosa_multiflora | Rmu_sc0008764.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00059920 |
| rosa_rugosa | Rorug05G0036700 |
| rosa_samantha | Rh5AG130800 Rh5BG128700 Rh5CG141000 Rh5DG130900 |
| rosa_wichuraiana | Rw5G011280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3445 |
| Acc36I | ACCTGC | 2 cut(s) | 591, 3435 |
| Acc65I | GGTACC | 1 cut(s) | 2964 |
| AccB1I | GGYRCC | 1 cut(s) | 2964 |
| AccBSI | CCGCTC | 1 cut(s) | 2754 |
| AccI | GTMKAC | 1 cut(s) | 3681 |
| AciI | CCGC | 6 cut(s) | 17, 112, 2161, 2754, 2837, 4217 |
| AclI | AACGTT | 2 cut(s) | 1024, 2480 |
| AclWI | GGATC | 3 cut(s) | 402, 2686, 3935 |
| AcoI | YGGCCR | 1 cut(s) | 2355 |
| AcuI | CTGAAG | 7 cut(s) | 788, 839, 999, 1683, 2929, 3045, 3276 |
| AfaI | GTAC | 6 cut(s) | 80, 816, 1669, 2815, 2966, 3748 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 373, 1735, 1844, 2714, 3142, 3787 |
| AflII | CTTAAG | 1 cut(s) | 1502 |
| AflIII | ACRYGT | 1 cut(s) | 3162 |
| AjiI | CACGTC | 1 cut(s) | 25 |
| AjnI | CCWGG | 4 cut(s) | 39, 1038, 1626, 1720 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1178, 1210 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2846, 2878, 3888, 3920 |
| Alw21I | GWGCWC | 3 cut(s) | 126, 154, 3170 |
| Alw26I | GTCTC | 7 cut(s) | 392, 854, 1718, 1839, 2592, 3290, 3679 |
| Alw44I | GTGCAC | 1 cut(s) | 122 |
| AlwI | GGATC | 3 cut(s) | 402, 2686, 3935 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1627, 3590 |
| Ama87I | CYCGRG | 3 cut(s) | 185, 2600, 3566 |
| AoxI | GGCC | 5 cut(s) | 948, 1094, 2355, 4024, 4201 |
| ApaLI | GTGCAC | 1 cut(s) | 122 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2019, 2051 |
| AseI | ATTAAT | 3 cut(s) | 381, 621, 1424 |
| Asp718I | GGTACC | 1 cut(s) | 2964 |
| AspLEI | GCGC | 1 cut(s) | 1626 |
| AspS9I | GGNCC | 3 cut(s) | 1036, 3447, 4136 |
| AsuC2I | CCSGG | 1 cut(s) | 368 |
| AsuHPI | GGTGA | 4 cut(s) | 344, 1300, 1348, 2697 |
| AsuII | TTCGAA | 1 cut(s) | 1450 |
| AvaI | CYCGRG | 3 cut(s) | 185, 2600, 3566 |
| AvaII | GGWCC | 3 cut(s) | 1036, 3447, 4136 |
| BaeGI | GKGCMC | 1 cut(s) | 126 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3730, 3763 |
| BalI | TGGCCA | 1 cut(s) | 2357 |
| BanI | GGYRCC | 1 cut(s) | 2964 |
| BanII | GRGCYC | 2 cut(s) | 154, 1925 |
| BauI | CACGAG | 2 cut(s) | 1353, 2793 |
| BbsI | GAAGAC | 1 cut(s) | 429 |
| Bbv12I | GWGCWC | 3 cut(s) | 126, 154, 3170 |
| BbvCI | CCTCAGC | 1 cut(s) | 1980 |
| BccI | CCATC | 9 cut(s) | 551, 1333, 2051, 2347, 2419, 2501, 2560, 3302, 3616 |
| BceAI | ACGGC | 1 cut(s) | 4068 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3147, 3181 |
| BciT130I | CCWGG | 4 cut(s) | 41, 1040, 1628, 1722 |
| BciVI | GTATCC | 3 cut(s) | 2094, 3331, 3482 |
| BclI | TGATCA | 2 cut(s) | 1360, 1609 |
| BcnI | CCSGG | 1 cut(s) | 368 |
| BcoDI | GTCTC | 7 cut(s) | 392, 854, 1718, 1839, 2592, 3290, 3679 |
| BfaI | CTAG | 9 cut(s) | 273, 483, 1371, 1586, 2247, 2744, 2928, 3441, 3594 |
| BfmI | CTRYAG | 4 cut(s) | 2252, 2398, 2560, 3552 |
| BfoI | RGCGCY | 1 cut(s) | 1627 |
| BfrI | CTTAAG | 1 cut(s) | 1502 |
| BfuAI | ACCTGC | 2 cut(s) | 591, 3435 |
| BfuI | GTATCC | 3 cut(s) | 2094, 3331, 3482 |
| BmcAI | AGTACT | 1 cut(s) | 80 |
| Bme1390I | CCNGG | 5 cut(s) | 41, 368, 1040, 1628, 1722 |
| Bme18I | GGWCC | 3 cut(s) | 1036, 3447, 4136 |
| BmeT110I | CYCGRG | 3 cut(s) | 185, 2600, 3566 |
| BmgBI | CACGTC | 1 cut(s) | 25 |
| BmgT120I | GGNCC | 3 cut(s) | 1036, 3447, 4136 |
| BmiI | GGNNCC | 4 cut(s) | 1119, 2966, 3713, 4227 |
| BmrFI | CCNGG | 5 cut(s) | 41, 368, 1040, 1628, 1722 |
| BmrI | ACTGGG | 1 cut(s) | 1724 |
| BmuI | ACTGGG | 1 cut(s) | 1724 |
| BpiI | GAAGAC | 1 cut(s) | 429 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3607, 3639 |
| BpmI | CTGGAG | 5 cut(s) | 515, 1399, 1806, 1821, 1850 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1980, 4230 |
| Bpu14I | TTCGAA | 1 cut(s) | 1450 |
| BpuMI | CCSGG | 1 cut(s) | 368 |
| BsaAI | YACGTR | 1 cut(s) | 66 |
| BsaI | GGTCTC | 1 cut(s) | 3290 |
| BsaJI | CCNNGG | 9 cut(s) | 39, 951, 1627, 2869, 3042, 3300, 3845, 3910, 3943 |
| BsaWI | WCCGGW | 1 cut(s) | 885 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2709, 2739, 2846, 2876 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 373, 1735, 1844, 2714, 3142, 3787 |
| Bse1I | ACTGG | 8 cut(s) | 29, 1730, 1833, 1838, 2319, 3406, 3750, 3898 |
| Bse3DI | GCAATG | 4 cut(s) | 18, 2008, 2271, 3695 |
| BseBI | CCWGG | 4 cut(s) | 41, 1040, 1628, 1722 |
| BseDI | CCNNGG | 9 cut(s) | 39, 951, 1627, 2869, 3042, 3300, 3845, 3910, 3943 |
| BseGI | GGATG | 5 cut(s) | 1117, 1201, 1744, 2571, 2764 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 373, 1735, 1844, 2714, 3142, 3787 |
| BseMI | GCAATG | 4 cut(s) | 18, 2008, 2271, 3695 |
| BseNI | ACTGG | 8 cut(s) | 29, 1730, 1833, 1838, 2319, 3406, 3750, 3898 |
| BseRI | GAGGAG | 4 cut(s) | 236, 473, 1958, 3513 |
| BseSI | GKGCMC | 1 cut(s) | 126 |
| BseYI | CCCAGC | 1 cut(s) | 245 |
| BsgI | GTGCAG | 4 cut(s) | 1749, 1780, 2655, 3405 |
| BshFI | GGCC | 5 cut(s) | 950, 1096, 2357, 4026, 4203 |
| BshNI | GGYRCC | 1 cut(s) | 2964 |
| BsiHKAI | GWGCWC | 3 cut(s) | 126, 154, 3170 |
| BsiHKCI | CYCGRG | 3 cut(s) | 185, 2600, 3566 |
| BsiSI | CCGG | 2 cut(s) | 367, 886 |
| BslFI | GGGAC | 3 cut(s) | 111, 383, 4019 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 373, 1735, 1844, 2714, 3142, 3787 |
| BsmAI | GTCTC | 7 cut(s) | 392, 854, 1718, 1839, 2592, 3290, 3679 |
| BsmBI | CGTCTC | 1 cut(s) | 1718 |
| BsmFI | GGGAC | 3 cut(s) | 111, 383, 4019 |
| BsmI | GAATGC | 5 cut(s) | 40, 109, 445, 2561, 3727 |
| BsnI | GGCC | 5 cut(s) | 950, 1096, 2357, 4026, 4203 |
| Bso31I | GGTCTC | 1 cut(s) | 3290 |
| BsoBI | CYCGRG | 3 cut(s) | 185, 2600, 3566 |
| Bsp119I | TTCGAA | 1 cut(s) | 1450 |
| Bsp1286I | GDGCHC | 4 cut(s) | 126, 154, 1925, 3170 |
| Bsp143I | GATC | 9 cut(s) | 197, 394, 847, 1360, 1609, 2678, 2797, 3766, 3927 |
| BspACI | CCGC | 6 cut(s) | 17, 112, 2161, 2754, 2837, 4217 |
| BspANI | GGCC | 5 cut(s) | 950, 1096, 2357, 4026, 4203 |
| BspHI | TCATGA | 1 cut(s) | 3543 |
| BspLI | GGNNCC | 4 cut(s) | 1119, 2966, 3713, 4227 |
| BspMAI | CTGCAG | 2 cut(s) | 2256, 2402 |
| BspMI | ACCTGC | 2 cut(s) | 591, 3435 |
| BspPI | GGATC | 3 cut(s) | 402, 2686, 3935 |
| BspQI | GCTCTTC | 1 cut(s) | 2744 |
| BspT104I | TTCGAA | 1 cut(s) | 1450 |
| BspT107I | GGYRCC | 1 cut(s) | 2964 |
| BspTI | CTTAAG | 1 cut(s) | 1502 |
| BspTNI | GGTCTC | 1 cut(s) | 3290 |
| BsrBI | CCGCTC | 1 cut(s) | 2754 |
| BsrDI | GCAATG | 4 cut(s) | 18, 2008, 2271, 3695 |
| BsrI | ACTGG | 8 cut(s) | 29, 1730, 1833, 1838, 2319, 3406, 3750, 3898 |
| BssECI | CCNNGG | 9 cut(s) | 39, 951, 1627, 2869, 3042, 3300, 3845, 3910, 3943 |
| BssMI | GATC | 9 cut(s) | 197, 394, 847, 1360, 1609, 2678, 2797, 3766, 3927 |
| BssSI | CACGAG | 2 cut(s) | 1353, 2793 |
| BssT1I | CCWWGG | 6 cut(s) | 951, 2869, 3042, 3300, 3910, 3943 |
| Bst2BI | CACGAG | 2 cut(s) | 1353, 2793 |
| Bst2UI | CCWGG | 4 cut(s) | 41, 1040, 1628, 1722 |
| Bst6I | CTCTTC | 2 cut(s) | 2744, 4078 |
| BstAFI | CTTAAG | 1 cut(s) | 1502 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 242, 2633 |
| BstBAI | YACGTR | 1 cut(s) | 66 |
| BstBI | TTCGAA | 1 cut(s) | 1450 |
| BstC8I | GCNNGC | 4 cut(s) | 673, 765, 2841, 3012 |
| BstEII | GGTNACC | 1 cut(s) | 1984 |
| BstF5I | GGATG | 5 cut(s) | 1117, 1201, 1744, 2571, 2764 |
| BstH2I | RGCGCY | 1 cut(s) | 1627 |
| BstHHI | GCGC | 1 cut(s) | 1626 |
| BstKTI | GATC | 9 cut(s) | 200, 397, 850, 1363, 1612, 2681, 2800, 3769, 3930 |
| BstMAI | GTCTC | 7 cut(s) | 392, 854, 1718, 1839, 2592, 3290, 3679 |
| BstMBI | GATC | 9 cut(s) | 197, 394, 847, 1360, 1609, 2678, 2797, 3766, 3927 |
| BstNI | CCWGG | 4 cut(s) | 41, 1040, 1628, 1722 |
| BstNSI | RCATGY | 3 cut(s) | 2161, 3166, 3482 |
| BstPI | GGTNACC | 1 cut(s) | 1984 |
| BstSCI | CCNGG | 5 cut(s) | 39, 366, 1038, 1626, 1720 |
| BstSFI | CTRYAG | 4 cut(s) | 2252, 2398, 2560, 3552 |
| BstSLI | GKGCMC | 1 cut(s) | 126 |
| BstV2I | GAAGAC | 1 cut(s) | 429 |
| BstX2I | RGATCY | 1 cut(s) | 394 |
| BstYI | RGATCY | 1 cut(s) | 394 |
| BsuI | GTATCC | 3 cut(s) | 2094, 3331, 3482 |
| BsuRI | GGCC | 5 cut(s) | 950, 1096, 2357, 4026, 4203 |
| BtrI | CACGTC | 1 cut(s) | 25 |
| BtsCI | GGATG | 5 cut(s) | 1117, 1201, 1744, 2571, 2764 |
| BtsI | GCAGTG | 2 cut(s) | 107, 3090 |
| BveI | ACCTGC | 2 cut(s) | 591, 3435 |
| Cac8I | GCNNGC | 4 cut(s) | 673, 765, 2841, 3012 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1627, 3590 |
| CciI | TCATGA | 1 cut(s) | 3543 |
| CfoI | GCGC | 1 cut(s) | 1626 |
| Cfr13I | GGNCC | 3 cut(s) | 1036, 3447, 4136 |
| CseI | GACGC | 2 cut(s) | 1700, 3692 |
| CsiI | ACCWGGT | 1 cut(s) | 1038 |
| Csp6I | GTAC | 6 cut(s) | 79, 815, 1668, 2814, 2965, 3747 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1129, 1164, 2832, 2867 |
| CviQI | GTAC | 6 cut(s) | 79, 815, 1668, 2814, 2965, 3747 |
| DpnI | GATC | 9 cut(s) | 199, 396, 849, 1362, 1611, 2680, 2799, 3768, 3929 |
| DpnII | GATC | 9 cut(s) | 197, 394, 847, 1360, 1609, 2678, 2797, 3766, 3927 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3445 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3445 |
| EaeI | YGGCCR | 1 cut(s) | 2355 |
| Eam1104I | CTCTTC | 2 cut(s) | 2744, 4078 |
| EarI | CTCTTC | 2 cut(s) | 2744, 4078 |
| Ecl136II | GAGCTC | 1 cut(s) | 152 |
| Eco130I | CCWWGG | 6 cut(s) | 951, 2869, 3042, 3300, 3910, 3943 |
| Eco147I | AGGCCT | 1 cut(s) | 1096 |
| Eco24I | GRGCYC | 2 cut(s) | 154, 1925 |
| Eco31I | GGTCTC | 1 cut(s) | 3290 |
| Eco32I | GATATC | 2 cut(s) | 2237, 2888 |
| Eco47I | GGWCC | 3 cut(s) | 1036, 3447, 4136 |
| Eco53kI | GAGCTC | 1 cut(s) | 152 |
| Eco57I | CTGAAG | 7 cut(s) | 788, 839, 999, 1683, 2929, 3045, 3276 |
| Eco88I | CYCGRG | 3 cut(s) | 185, 2600, 3566 |
| Eco91I | GGTNACC | 1 cut(s) | 1984 |
| EcoICRI | GAGCTC | 1 cut(s) | 152 |
| EcoO65I | GGTNACC | 1 cut(s) | 1984 |
| EcoRI | GAATTC | 2 cut(s) | 163, 3968 |
| EcoRII | CCWGG | 4 cut(s) | 39, 1038, 1626, 1720 |
| EcoRV | GATATC | 2 cut(s) | 2237, 2888 |
| EcoT14I | CCWWGG | 6 cut(s) | 951, 2869, 3042, 3300, 3910, 3943 |
| EcoT22I | ATGCAT | 3 cut(s) | 1435, 2190, 3875 |
| EcoT38I | GRGCYC | 2 cut(s) | 154, 1925 |
| ErhI | CCWWGG | 6 cut(s) | 951, 2869, 3042, 3300, 3910, 3943 |
| Esp3I | CGTCTC | 1 cut(s) | 1718 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 582, 614 |
| FaqI | GGGAC | 3 cut(s) | 111, 383, 4019 |
| FauI | CCCGC | 3 cut(s) | 105, 2747, 4210 |
| FbaI | TGATCA | 2 cut(s) | 1360, 1609 |
| FblI | GTMKAC | 1 cut(s) | 3681 |
| FokI | GGATG | 5 cut(s) | 1124, 1188, 1751, 2578, 2771 |
| FriOI | GRGCYC | 2 cut(s) | 154, 1925 |
| FspBI | CTAG | 9 cut(s) | 273, 483, 1371, 1586, 2247, 2744, 2928, 3441, 3594 |
| GlaI | GCGC | 1 cut(s) | 1625 |
| GsaI | CCCAGC | 1 cut(s) | 249 |
| GsuI | CTGGAG | 5 cut(s) | 515, 1399, 1806, 1821, 1850 |
| HaeII | RGCGCY | 1 cut(s) | 1627 |
| HaeIII | GGCC | 5 cut(s) | 950, 1096, 2357, 4026, 4203 |
| HapII | CCGG | 2 cut(s) | 367, 886 |
| HgaI | GACGC | 2 cut(s) | 1700, 3692 |
| HhaI | GCGC | 1 cut(s) | 1626 |
| Hin6I | GCGC | 1 cut(s) | 1624 |
| HinP1I | GCGC | 1 cut(s) | 1624 |
| HincII | GTYRAC | 2 cut(s) | 2737, 3682 |
| HindII | GTYRAC | 2 cut(s) | 2737, 3682 |
| HindIII | AAGCTT | 5 cut(s) | 635, 702, 869, 890, 1310 |
| HpaII | CCGG | 2 cut(s) | 367, 886 |
| HphI | GGTGA | 4 cut(s) | 344, 1300, 1348, 2697 |
| Hpy166II | GTNNAC | 5 cut(s) | 124, 580, 2737, 2879, 3682 |
| Hpy8I | GTNNAC | 5 cut(s) | 124, 580, 2737, 2879, 3682 |
| Hpy99I | CGWCG | 2 cut(s) | 2785, 3686 |
| HpyCH4IV | ACGT | 5 cut(s) | 24, 65, 1024, 2480, 2610 |
| HpySE526I | ACGT | 5 cut(s) | 24, 65, 1024, 2480, 2610 |
| HspAI | GCGC | 1 cut(s) | 1624 |
| KpnI | GGTACC | 1 cut(s) | 2968 |
| Ksp22I | TGATCA | 2 cut(s) | 1360, 1609 |
| Kzo9I | GATC | 9 cut(s) | 197, 394, 847, 1360, 1609, 2678, 2797, 3766, 3927 |
| LguI | GCTCTTC | 1 cut(s) | 2744 |
| LmnI | GCTCC | 6 cut(s) | 1123, 1198, 2839, 3114, 3360, 3717 |
| MabI | ACCWGGT | 1 cut(s) | 1038 |
| MaeI | CTAG | 9 cut(s) | 273, 483, 1371, 1586, 2247, 2744, 2928, 3441, 3594 |
| MaeII | ACGT | 5 cut(s) | 24, 65, 1024, 2480, 2610 |
| MaeIII | GTNAC | 8 cut(s) | 1068, 1863, 1984, 2500, 2703, 2776, 3556, 4048 |
| MalI | GATC | 9 cut(s) | 199, 396, 849, 1362, 1611, 2680, 2799, 3768, 3929 |
| MbiI | CCGCTC | 1 cut(s) | 2754 |
| MboI | GATC | 9 cut(s) | 197, 394, 847, 1360, 1609, 2678, 2797, 3766, 3927 |
| MfeI | CAATTG | 1 cut(s) | 2121 |
| MflI | RGATCY | 1 cut(s) | 394 |
| MhlI | GDGCHC | 4 cut(s) | 126, 154, 1925, 3170 |
| MlsI | TGGCCA | 1 cut(s) | 2357 |
| MluNI | TGGCCA | 1 cut(s) | 2357 |
| MlyI | GAGTC | 6 cut(s) | 419, 659, 1841, 2801, 4001, 4154 |
| MmeI | TCCRAC | 5 cut(s) | 789, 1359, 1541, 1992, 2044 |
| Mox20I | TGGCCA | 1 cut(s) | 2357 |
| Mph1103I | ATGCAT | 3 cut(s) | 1435, 2190, 3875 |
| MscI | TGGCCA | 1 cut(s) | 2357 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1533, 1598, 3379, 3997 |
| Msp20I | TGGCCA | 1 cut(s) | 2357 |
| MspA1I | CMGCKG | 1 cut(s) | 4217 |
| MspCI | CTTAAG | 1 cut(s) | 1502 |
| MspI | CCGG | 2 cut(s) | 367, 886 |
| MspR9I | CCNGG | 5 cut(s) | 41, 368, 1040, 1628, 1722 |
| MunI | CAATTG | 1 cut(s) | 2121 |
| Mva1269I | GAATGC | 5 cut(s) | 40, 109, 445, 2561, 3727 |
| MvaI | CCWGG | 4 cut(s) | 41, 1040, 1628, 1722 |
| NciI | CCSGG | 1 cut(s) | 368 |
| NdeII | GATC | 9 cut(s) | 197, 394, 847, 1360, 1609, 2678, 2797, 3766, 3927 |
| NlaIV | GGNNCC | 4 cut(s) | 1119, 2966, 3713, 4227 |
| NmeAIII | GCCGAG | 3 cut(s) | 184, 327, 3826 |
| NmuCI | GTSAC | 2 cut(s) | 2703, 4048 |
| NsiI | ATGCAT | 3 cut(s) | 1435, 2190, 3875 |
| NspI | RCATGY | 3 cut(s) | 2161, 3166, 3482 |
| NspV | TTCGAA | 1 cut(s) | 1450 |
| PaeR7I | CTCGAG | 2 cut(s) | 185, 3566 |
| PagI | TCATGA | 1 cut(s) | 3543 |
| PceI | AGGCCT | 1 cut(s) | 1096 |
| PciI | ACATGT | 1 cut(s) | 3162 |
| PciSI | GCTCTTC | 1 cut(s) | 2744 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1021 |
| PctI | GAATGC | 5 cut(s) | 40, 109, 445, 2561, 3727 |
| PleI | GAGTC | 6 cut(s) | 419, 659, 1840, 2801, 4001, 4153 |
| PpsI | GAGTC | 6 cut(s) | 419, 659, 1840, 2801, 4001, 4153 |
| Ppu21I | YACGTR | 1 cut(s) | 66 |
| PscI | ACATGT | 1 cut(s) | 3162 |
| PshBI | ATTAAT | 3 cut(s) | 381, 621, 1424 |
| Psp124BI | GAGCTC | 1 cut(s) | 154 |
| Psp1406I | AACGTT | 2 cut(s) | 1024, 2480 |
| Psp6I | CCWGG | 4 cut(s) | 39, 1038, 1626, 1720 |
| PspEI | GGTNACC | 1 cut(s) | 1984 |
| PspFI | CCCAGC | 1 cut(s) | 245 |
| PspGI | CCWGG | 4 cut(s) | 39, 1038, 1626, 1720 |
| PspN4I | GGNNCC | 4 cut(s) | 1119, 2966, 3713, 4227 |
| PspPI | GGNCC | 3 cut(s) | 1036, 3447, 4136 |
| PspXI | VCTCGAGB | 1 cut(s) | 185 |
| PstI | CTGCAG | 2 cut(s) | 2256, 2402 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1627, 3590 |
| PsuI | RGATCY | 1 cut(s) | 394 |
| RsaI | GTAC | 6 cut(s) | 80, 816, 1669, 2815, 2966, 3748 |
| RsaNI | GTAC | 6 cut(s) | 79, 815, 1668, 2814, 2965, 3747 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1533, 1598, 3379, 3997 |
| SacI | GAGCTC | 1 cut(s) | 154 |
| SalI | GTCGAC | 1 cut(s) | 3680 |
| SapI | GCTCTTC | 1 cut(s) | 2744 |
| Sau3AI | GATC | 9 cut(s) | 197, 394, 847, 1360, 1609, 2678, 2797, 3766, 3927 |
| Sau96I | GGNCC | 3 cut(s) | 1036, 3447, 4136 |
| ScaI | AGTACT | 1 cut(s) | 80 |
| SchI | GAGTC | 6 cut(s) | 419, 659, 1841, 2801, 4001, 4154 |
| ScrFI | CCNGG | 5 cut(s) | 41, 368, 1040, 1628, 1722 |
| SduI | GDGCHC | 4 cut(s) | 126, 154, 1925, 3170 |
| SexAI | ACCWGGT | 1 cut(s) | 1038 |
| SfcI | CTRYAG | 4 cut(s) | 2252, 2398, 2560, 3552 |
| Sfr274I | CTCGAG | 2 cut(s) | 185, 3566 |
| SfuI | TTCGAA | 1 cut(s) | 1450 |
| SinI | GGWCC | 3 cut(s) | 1036, 3447, 4136 |
| SlaI | CTCGAG | 2 cut(s) | 185, 3566 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1533, 1598, 3379, 3997 |
| SseBI | AGGCCT | 1 cut(s) | 1096 |
| SsiI | CCGC | 6 cut(s) | 17, 112, 2161, 2754, 2837, 4217 |
| SspI | AATATT | 2 cut(s) | 772, 3838 |
| SspMI | CTAG | 9 cut(s) | 273, 483, 1371, 1586, 2247, 2744, 2928, 3441, 3594 |
| SstI | GAGCTC | 1 cut(s) | 154 |
| StuI | AGGCCT | 1 cut(s) | 1096 |
| StyD4I | CCNGG | 5 cut(s) | 39, 366, 1038, 1626, 1720 |
| StyI | CCWWGG | 6 cut(s) | 951, 2869, 3042, 3300, 3910, 3943 |
| TaiI | ACGT | 5 cut(s) | 27, 68, 1027, 2483, 2613 |
| TaqII | GACCGA | 1 cut(s) | 4124 |
| TatI | WGTACW | 1 cut(s) | 78 |
| TauI | GCSGC | 1 cut(s) | 20 |
| TseFI | GTSAC | 2 cut(s) | 2703, 4048 |
| Tsp45I | GTSAC | 2 cut(s) | 2703, 4048 |
| TspGWI | ACGGA | 3 cut(s) | 115, 283, 2286 |
| Vha464I | CTTAAG | 1 cut(s) | 1502 |
| VneI | GTGCAC | 1 cut(s) | 122 |
| VpaK11BI | GGWCC | 3 cut(s) | 1036, 3447, 4136 |
| VspI | ATTAAT | 3 cut(s) | 381, 621, 1424 |
| XbaI | TCTAGA | 1 cut(s) | 1370 |
| XceI | RCATGY | 3 cut(s) | 2161, 3166, 3482 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3457 |
| XhoI | CTCGAG | 2 cut(s) | 185, 3566 |
| XmiI | GTMKAC | 1 cut(s) | 3681 |
| XspI | CTAG | 9 cut(s) | 273, 483, 1371, 1586, 2247, 2744, 2928, 3441, 3594 |
| ZrmI | AGTACT | 1 cut(s) | 80 |
| Zsp2I | ATGCAT | 3 cut(s) | 1435, 2190, 3875 |