Rh5AG130800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
13028276 .. 13034947
6672 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG130800.1

Sequence Viewer

Length: 4365 bp
ATGGTCGCTTCAATTGCTTCGTCCAACTCCAATAAACCCACAATGGCGGCGAAAGTGCCGGTGGAGCCTGAGAAGGCCAATCCCTGCTGCGCTGCGTGGCAAAAGAAGTATTTGAAGAGTGAGAAGCTACGGAATCATCTGCGGGAAGCTGTGAATATCCTTCAACAGGGGACGGAAGAAGTTCAAGCACAGAATTCCAATCTCAAGAAAGAATATGAGGAGTTGCGAGTGCTGGCAGATATTGAGAAAGAGGAGAAAGTGAAAGAATATGCGGCAAGGGTCTCTCTGGGGAATGAGGTTTCTGAGTTGAAATCTGAGATACTTTCTCTCAAGCAGCAGCGAGCAGGTGCAGATTCTCAGGATAAGAATGAAGTAAAGCTTCTTAAAGGTCAGGTTTCTGATCGGGAACAGGAAATTAGTCGTCTCAAGGAGCTGATTGAGAGAGAGAAGAAAAGAGCAGAATCAGAAAGTAAGAAAGCAGAAGTGGAGAAGAAAAAGGCTGCCGAAGCACAAAAAAGTGTGAAAATTGAAAAAAAGAAGGCTGATGAAGAAAGGAAGCGTGCCAATATTGAAGGAGAGAAGGCGGAGAATTATAGGCTTCAATTGGAGGTATTGGAGAAAGACTCTGCTGAAGCAAAATCTCATTCTGAAGGGGAAAAAGAGATTAGTTGTCTCAAGGAGCTTATTGAGAGAGAGAAGAAAAGAGCAGAATCAGAAAGTAAGAAAGCAGAAGCGGAGAAGAAAAAGGCTGCTGAAGCACTGAAAATTATGAAAACTGAAAAAAGTAAGGCTGACGAAGAAAGGAAGCGTGCCAATATTGAAGGAGAGAAGGCTGAGAATTATAGGCTTCGGTTGGAGGTATTGCAAATAGAAGCTGATAAAGCGAAATCTAATTTGGCTTCAGAAACATTGAAACTCGAAGTAGCAAGCAAAAAGCTTGAAGCAGAAAAACTGAAGGTCGTCAAGGAGAGAGAATGTGCAAATTCAGAGATGGTGAAAGCAGAGGAACAGAGGAAGCTTGCAGAAGCCAACAGGAAAAAGACCATTGAAGAAAAATCTCGTGCTGAAAGTTTGTCTCTGCAATTGGTAGAGAGCAGAAAGAGGGTTGATGAATTACAAAAAGAGCTAAATGAACTTAGGTGTTCAAAAGAATTACATGCGGATCCTGGTGGCCAACCTGATAGTAATAGAATTGCTGTCGCTTCCAAAGAGATTTCAAATTTTGATGAAGCAAACAAAAGATACGAAGTTGAAAAGCAGAAGGTGGTGAAGGAGAAAAAGCGACCAGACTCAGAGATGGTGAGAACTCAAAAGCAGAAACAGCTTGCTGAAGTAAATTGGAAGAGGGCCATGGAAGAAAAATCTCGTGCTGATTATCTCTCTCAGCAGTTAGAGGAAGCTAAAAAAAAGATTGAGGAATTATCTACTAGAAATTTAATCGAGGCATCTGCTGTTCGACAACTTGCCAAAGGTATGAGTGATGAAAGTGCAAAGGTGAAACTTTTAAAGAAGCAGCTGAAGTTTGAGAAAATGCAAAGAAAGCATGCTAAGGAAGTGGTCAAGGTCAAGCTGGAAAGAAATCGCAACAGTATCCTACAACAAGAACTTGGTCGCTTGAAGTTGGACTTTGATCAAATTTCACAGCGCATGGATATGCTTAATAACTCTTTCTCCTATAATGCCGAAGGTATAGATGACCATGAAAAGACCTGGAACATCATGAAAAAGCAACGGTTAAGCAACAAGAATCACCAAGGGTTAGAATCTCTGCAGATGAATCTTCAAAGTGGAACTGACTTTCTGAAATCTGGCTTCCCAGTTTTGGATGAATCAGATCCTTTCAGGGAAGCCATGCAACATACTGGACCTTATCCTCCTTTATCTGGAGGAAACTGCACTGGATCTATTTCAGGTATTGATTCTAAATTAGAGTCTCCTAGGGGCTCTAAGAGAAACATGTTACACAGTTCTGCAATAAATTCAAGTACAGCATCTTTTTCTGATGGACAGTTGGTGGGCTCACAGGACAAAGGTGCCTTTTCTGTTACCGTGCCAACAAAATTAGTTGAGGAAAATGTGCAACCAACAATATCCAACTTGTCTACTGAGGTTATTAAAAGAAAGTGCAACGAAACTATTGCTGTGGTGGCTGAAAACACTGTCAAAAGTCCTGTACGAACTGATGGTATTGGACAAGTCAATGAGCATAGCAGGAAGAGAAAGAGGATAATAGATGCAGTTGAGTCAATTGAAAATCTTTACTGTGAGGGTAAGAAGTTCCACCAGCAGGTAGATGAAAAGCTATCTGATTTGCATTGTTTGTTAAGCAAGAAAATAAAGAAACCGGTTGAAGAAAGATTGCTTGAGAAGAGAAAGGCAGCTTGTGAAGGGAAATTGGTATTGGCGAGTTGTGTAGTCAGGAATGAGCAAAAGAAGGCAGATAGATTAAAAAATGAATGTGCGAATGTGTGCAGACAAGTTCCGAAAATTGCGGGTGAGCTGATAGGGACTGCCCAAGCGAGCAGAGAAGGCATAAGTGATCTCGATACTAGTGATATAGCAAGTTTTGATGAAGTAACCGATGAGAACTACCTTAAACTGTTAGAATTGGACAATGCTGCTGACGAAGAGTGCTACAGGATGGCAATGGAAATGCCATTGTCTCCTACACTTCCCGAGATTGAGGTCCTAGATGTTGAAACTTCTATTGCCAATAAGATCAATCCTTTAATAAAGGAAATTATCTGTGACAGATTTTCAAATAAGAATGGAGGTCATGGTGATTGTTGTGACACACAAGACCTGAATGGGAATGGTTCTGGTAATTCTGTAGCAATGGGTAAACCTTGGGATATCCAGGTGCAGGATGCTGGGGCTGAAGTGGTGTCTAATGCACCTACTTTAAAAAGTAAGGCTATGTTCCCATTTGGAAGTGATGGTGCTGCGGATGACAATATTCTCAAGTATCATGTTGTGTTTTCAAACACTGAAGACAGCAGTAGCATTTCTAGGATATGCAACGCATCCAGAACTTGTATTGCACAGTGCTCTTTAGCTATTCATACAGAGTGGATGGTGCGAGATATTCTGTTTGCTGTTGAGAGTGAAGAAAAACTTCTCCCCAAAGAGAAGGTTTGTGTATTCTTTTCCTTGTTGCTGCTTAACTTCTCCGTTGCTTCTTCAAGTAAATTTGGGAGCATGTATTGGGAGTCCAACCCCTGCTTGGATTCTTTTGCTCGACACATGTGCTCAGTGATGTCTGATGGTGATGGCAGAAGGATATTTTCAGAATTTGGTTGTTTGGATGAATCCCTTGGTCTCATAGAGGATTTCATAATACATGGAAGAGTTTTCGATTGTAAGGATGCACCTTCCAAGACGATGGTTGGGTGTCACTCTAGCAGCTTCCTACTTGAAGATATTACCCCTCGTTCATCATCAGCAGATGAGTTGGTGGCAGGGAGCATTGTATTGGCATCACTATGTGCAGCATTTGATCACATTGGTTTTATTTGTGAAACATCCTACACCATTTTGCAGATTAGGAGATTAGATCGTTCCTTGGTTCTGAAGGTGCTGCATGTTTTTGCTTACTTGGGTGGGGAGAAGTTTTTCAACTTTAGCAACTATAATTTAGTGACTGTCATGAAATCTATTGTTACATTTCTCGAGGGAATAAGATCATCAAATTCTGCTGGTTCTTGTATTACATCAGTAAGCAATTCAGGAACTGAATTCTGTCCGTGTGTCAAATGCCCATTTTCTGACGATGCTGTTTCTGTAGATACTGCTATATCATTGCTTTTAGAAAAGCTCCAAAGTGATGCTTTCTTGGGACCTATGAGTCAGGATGTGGTGCAATCAGTCAATTCAAATACAAATATCACACTGTGCAACCTCTGTGATCTCCTATCGTTGGTGGAGCTAGTTGCGTCCAACATGAGCTGGACATGGACCAGTGTCGAAGTTGTTCCTCAGCTGATGAAAATTTTGGAATCATGCAATGCTGAGAATGTTATTGCTGGAATTGTTGTCCTCCTTGGTCAACTTGGGAGGCTAGGAGTTGATTCTGTTGGCTATGAAGATAAAGGAGTGGAATTCTTGAGGCATGAGTTGTCTGCTCTTTTATGTCGTGACATTGGGACCAGTGCAGGTCTTCCTACTCAAATTGCCACCGTCACATCTATGCTGGGTCTGATGTCTTTTGATTTCAAAACAATTATCCAGAGTAACGTGAATATTTCCGTCATTTCAAGTCAATCTGATGCGGCCCAGGTGATAAGAAAGTGGTTTTCTTTGCTGCCAAAAAAACTACAGGAACCGTCATTCAGCCTTTTACAAGCTGCTAGTGTAGATAAGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1454

Amino Acids

162.12

Weight (kDa)

6.28

Isoelectric Point (pI)

45.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010060)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 335
AasI GACNNNNNNGTC 1 cut(s) 3843
Acc36I ACCTGC 3 cut(s) 335, 2278, 4142
AccB1I GGYRCC 1 cut(s) 2033
AccI GTMKAC 1 cut(s) 2102
AciI CCGC 9 cut(s) 47, 142, 272, 584, 734, 1160, 2492, 2945, 4268
AclWI GGATC 4 cut(s) 1157, 1170, 1829, 1909
AcoI YGGCCR 1 cut(s) 1171
AdeI CACNNNGTG 2 cut(s) 3485, 3891
AfaI GTAC 2 cut(s) 1987, 2175
AfiI CCNNNNNNNGG 7 cut(s) 166, 1822, 1883, 2287, 2863, 3223, 3916
AflIII ACRYGT 2 cut(s) 1956, 3243
AgeI ACCGGT 1 cut(s) 2344
AhlI ACTAGT 1 cut(s) 2549
AjnI CCWGG 4 cut(s) 1165, 1709, 2856, 4272
AjuI GAANNNNNNNTTGG 4 cut(s) 878, 910, 2384, 2416
Alw21I GWGCWC 2 cut(s) 3050, 3251
Alw26I GTCTC 7 cut(s) 286, 428, 677, 1080, 1938, 2667, 3323
AlwI GGATC 4 cut(s) 1157, 1170, 1829, 1909
AlwNI CAGNNNCTG 1 cut(s) 3731
Ama87I CYCGRG 2 cut(s) 2675, 3668
AoxI GGCC 4 cut(s) 75, 1171, 1347, 4269
AsiGI ACCGGT 1 cut(s) 2344
Asp700I GAANNNNTTC 4 cut(s) 180, 3114, 3611, 3969
AspA2I CCTAGG 1 cut(s) 1937
AspLEI GCGC 2 cut(s) 92, 1647
AspS9I GGNCC 7 cut(s) 1347, 1865, 2686, 3836, 3954, 4143, 4270
AsuHPI GGTGA 9 cut(s) 1006, 1279, 1312, 1507, 1742, 2507, 2792, 3278, 4288
AvaI CYCGRG 2 cut(s) 2675, 3668
AvaII GGWCC 5 cut(s) 1865, 2686, 3836, 3954, 4143
AvrII CCTAGG 1 cut(s) 1937
BalI TGGCCA 1 cut(s) 1173
BamHI GGATCC 1 cut(s) 1162
BanI GGYRCC 1 cut(s) 2033
BanII GRGCYC 2 cut(s) 1946, 2021
BauI CACGAG 2 cut(s) 1059, 1365
BbsI GAAGAC 2 cut(s) 2997, 4148
Bbv12I GWGCWC 2 cut(s) 3050, 3251
BbvCI CCTCAGC 1 cut(s) 3975
BcgI CGANNNNNNTGC 6 cut(s) 1430, 1464, 2120, 2154, 3228, 3262
BciT130I CCWGG 4 cut(s) 1167, 1711, 2858, 4274
BciVI GTATCC 1 cut(s) 1601
BclI TGATCA 2 cut(s) 1630, 3496
BcoDI GTCTC 7 cut(s) 286, 428, 677, 1080, 1938, 2667, 3323
BcuI ACTAGT 1 cut(s) 2549
BfaI CTAG 9 cut(s) 1428, 1938, 2550, 2690, 3009, 3399, 3926, 4058, 4347
BfmI CTRYAG 5 cut(s) 1769, 2635, 2829, 3780, 4313
BfuAI ACCTGC 3 cut(s) 335, 2278, 4142
BfuI GTATCC 1 cut(s) 1601
BlnI CCTAGG 1 cut(s) 1937
Bme1390I CCNGG 4 cut(s) 1167, 1711, 2858, 4274
Bme18I GGWCC 5 cut(s) 1865, 2686, 3836, 3954, 4143
BmeT110I CYCGRG 2 cut(s) 2675, 3668
BmgT120I GGNCC 7 cut(s) 1347, 1865, 2686, 3836, 3954, 4143, 4270
BmiI GGNNCC 6 cut(s) 66, 1164, 2035, 3837, 4144, 4320
BmrFI CCNGG 4 cut(s) 1167, 1711, 2858, 4274
BmrI ACTGGG 1 cut(s) 1811
BmuI ACTGGG 1 cut(s) 1811
BoxI GACNNNNGTC 1 cut(s) 3959
BpiI GAAGAC 2 cut(s) 2997, 4148
BplI GAGNNNNNCTC 2 cut(s) 608, 640
BpmI CTGGAG 1 cut(s) 1905
Bpu10I CCTNAGC 2 cut(s) 1548, 3975
BpuEI CTTGAG 7 cut(s) 188, 314, 410, 659, 2384, 2945, 4123
BsaI GGTCTC 2 cut(s) 286, 3323
BsaJI CCNNGG 8 cut(s) 1350, 1753, 1937, 2846, 3313, 3561, 4039, 4272
BsaWI WCCGGW 1 cut(s) 2344
BsaXI ACNNNNNCTCC 2 cut(s) 1655, 1685
Bsc4I CCNNNNNNNGG 7 cut(s) 166, 1822, 1883, 2287, 2863, 3223, 3916
Bse118I RCCGGY 2 cut(s) 58, 2344
Bse1I ACTGG 5 cut(s) 1817, 1867, 1903, 3957, 4146
Bse3DI GCAATG 4 cut(s) 2652, 2841, 3797, 4009
BseBI CCWGG 4 cut(s) 1167, 1711, 2858, 4274
BseDI CCNNGG 8 cut(s) 1350, 1753, 1937, 2846, 3313, 3561, 4039, 4272
BseLI CCNNNNNNNGG 7 cut(s) 166, 1822, 1883, 2287, 2863, 3223, 3916
BseMI GCAATG 4 cut(s) 2652, 2841, 3797, 4009
BseNI ACTGG 5 cut(s) 1817, 1867, 1903, 3957, 4146
BseRI GAGGAG 2 cut(s) 233, 266
BseYI CCCAGC 2 cut(s) 2870, 4189
BsgI GTGCAG 6 cut(s) 369, 1879, 2491, 2882, 3507, 4170
BshFI GGCC 4 cut(s) 77, 1173, 1349, 4271
BshNI GGYRCC 1 cut(s) 2033
BshTI ACCGGT 1 cut(s) 2344
BsiHKAI GWGCWC 2 cut(s) 3050, 3251
BsiHKCI CYCGRG 2 cut(s) 2675, 3668
BsiSI CCGG 2 cut(s) 59, 2345
BslFI GGGAC 4 cut(s) 184, 2521, 3849, 4156
BslI CCNNNNNNNGG 7 cut(s) 166, 1822, 1883, 2287, 2863, 3223, 3916
BsmAI GTCTC 7 cut(s) 286, 428, 677, 1080, 1938, 2667, 3323
BsmBI CGTCTC 1 cut(s) 428
BsmFI GGGAC 4 cut(s) 184, 2521, 3849, 4156
BsnI GGCC 4 cut(s) 77, 1173, 1349, 4271
Bso31I GGTCTC 2 cut(s) 286, 3323
BsoBI CYCGRG 2 cut(s) 2675, 3668
Bsp1286I GDGCHC 4 cut(s) 1946, 2021, 3050, 3251
Bsp19I CCATGG 1 cut(s) 1350
BspACI CCGC 9 cut(s) 47, 142, 272, 584, 734, 1160, 2492, 2945, 4268
BspANI GGCC 4 cut(s) 77, 1173, 1349, 4271
BspHI TCATGA 2 cut(s) 1719, 3645
BspLI GGNNCC 6 cut(s) 66, 1164, 2035, 3837, 4144, 4320
BspMAI CTGCAG 1 cut(s) 1773
BspMI ACCTGC 3 cut(s) 335, 2278, 4142
BspPI GGATC 4 cut(s) 1157, 1170, 1829, 1909
BspT107I GGYRCC 1 cut(s) 2033
BspTNI GGTCTC 2 cut(s) 286, 3323
BsrDI GCAATG 4 cut(s) 2652, 2841, 3797, 4009
BsrFI RCCGGY 2 cut(s) 58, 2344
BsrI ACTGG 5 cut(s) 1817, 1867, 1903, 3957, 4146
BssAI RCCGGY 2 cut(s) 58, 2344
BssECI CCNNGG 8 cut(s) 1350, 1753, 1937, 2846, 3313, 3561, 4039, 4272
BssSI CACGAG 2 cut(s) 1059, 1365
BssT1I CCWWGG 7 cut(s) 1350, 1753, 1937, 2846, 3313, 3561, 4039
Bst2BI CACGAG 2 cut(s) 1059, 1365
Bst2UI CCWGG 4 cut(s) 1167, 1711, 2858, 4274
Bst6I CTCTTC 6 cut(s) 110, 1337, 2210, 2363, 2622, 3340
BstC8I GCNNGC 9 cut(s) 234, 342, 561, 810, 928, 1020, 1326, 1545, 2521
BstDSI CCRYGG 1 cut(s) 1350
BstENI CCTNNNNNAGG 1 cut(s) 164
BstHHI GCGC 2 cut(s) 92, 1647
BstMAI GTCTC 7 cut(s) 286, 428, 677, 1080, 1938, 2667, 3323
BstMWI GCNNNNNNNGC 9 cut(s) 14, 64, 506, 755, 881, 1321, 1540, 2147, 2529
BstNI CCWGG 4 cut(s) 1167, 1711, 2858, 4274
BstNSI RCATGY 6 cut(s) 1160, 1547, 1960, 3202, 3247, 3584
BstPAI GACNNNNGTC 1 cut(s) 3959
BstSCI CCNGG 4 cut(s) 1165, 1709, 2856, 4272
BstSFI CTRYAG 5 cut(s) 1769, 2635, 2829, 3780, 4313
BstV2I GAAGAC 2 cut(s) 2997, 4148
BstX2I RGATCY 3 cut(s) 1162, 1834, 1901
BstXI CCANNNNNNTGG 1 cut(s) 3382
BstYI RGATCY 3 cut(s) 1162, 1834, 1901
BsuI GTATCC 1 cut(s) 1601
BsuRI GGCC 4 cut(s) 77, 1173, 1349, 4271
BtgI CCRYGG 1 cut(s) 1350
BtsIMutI CAGTG 9 cut(s) 758, 1896, 2157, 2985, 3050, 3258, 3887, 3964, 4153
BveI ACCTGC 3 cut(s) 335, 2278, 4142
Cac8I GCNNGC 9 cut(s) 234, 342, 561, 810, 928, 1020, 1326, 1545, 2521
CaiI CAGNNNCTG 1 cut(s) 3731
CciI TCATGA 2 cut(s) 1719, 3645
CfoI GCGC 2 cut(s) 92, 1647
Cfr10I RCCGGY 2 cut(s) 58, 2344
Cfr13I GGNCC 7 cut(s) 1347, 1865, 2686, 3836, 3954, 4143, 4270
CseI GACGC 1 cut(s) 3921
Csp6I GTAC 2 cut(s) 1986, 2174
CspAI ACCGGT 1 cut(s) 2344
CviQI GTAC 2 cut(s) 1986, 2174
DraI TTTAAA 2 cut(s) 1506, 2904
DraIII CACNNNGTG 2 cut(s) 3485, 3891
DrdI GACNNNNNNGTC 1 cut(s) 3843
DseDI GACNNNNNNGTC 1 cut(s) 3843
EaeI YGGCCR 1 cut(s) 1171
Eam1104I CTCTTC 6 cut(s) 110, 1337, 2210, 2363, 2622, 3340
EarI CTCTTC 6 cut(s) 110, 1337, 2210, 2363, 2622, 3340
EciI GGCGGA 1 cut(s) 599
Eco130I CCWWGG 7 cut(s) 1350, 1753, 1937, 2846, 3313, 3561, 4039
Eco24I GRGCYC 2 cut(s) 1946, 2021
Eco31I GGTCTC 2 cut(s) 286, 3323
Eco32I GATATC 1 cut(s) 2854
Eco47I GGWCC 5 cut(s) 1865, 2686, 3836, 3954, 4143
Eco88I CYCGRG 2 cut(s) 2675, 3668
EcoNI CCTNNNNNAGG 1 cut(s) 164
EcoO109I RGGNCCY 2 cut(s) 2686, 3836
EcoRI GAATTC 3 cut(s) 193, 3734, 4097
EcoRII CCWGG 4 cut(s) 1165, 1709, 2856, 4272
EcoRV GATATC 1 cut(s) 2854
EcoT14I CCWWGG 7 cut(s) 1350, 1753, 1937, 2846, 3313, 3561, 4039
EcoT38I GRGCYC 2 cut(s) 1946, 2021
ErhI CCWWGG 7 cut(s) 1350, 1753, 1937, 2846, 3313, 3561, 4039
Esp3I CGTCTC 1 cut(s) 428
FalI AAGNNNNNCTT 8 cut(s) 363, 395, 1610, 1642, 3099, 3131, 3811, 3843
FaqI GGGAC 4 cut(s) 184, 2521, 3849, 4156
FauI CCCGC 2 cut(s) 135, 2485
FbaI TGATCA 2 cut(s) 1630, 3496
FblI GTMKAC 1 cut(s) 2102
FriOI GRGCYC 2 cut(s) 1946, 2021
FspBI CTAG 9 cut(s) 1428, 1938, 2550, 2690, 3009, 3399, 3926, 4058, 4347
GlaI GCGC 2 cut(s) 91, 1646
GsaI CCCAGC 2 cut(s) 2874, 4193
GsuI CTGGAG 1 cut(s) 1905
HaeIII GGCC 4 cut(s) 77, 1173, 1349, 4271
HapII CCGG 2 cut(s) 59, 2345
HgaI GACGC 1 cut(s) 3921
HhaI GCGC 2 cut(s) 92, 1647
Hin6I GCGC 2 cut(s) 90, 1645
HinP1I GCGC 2 cut(s) 90, 1645
HincII GTYRAC 1 cut(s) 4046
HindII GTYRAC 1 cut(s) 4046
HindIII AAGCTT 3 cut(s) 377, 935, 1016
HpaII CCGG 2 cut(s) 59, 2345
HphI GGTGA 9 cut(s) 1006, 1279, 1312, 1507, 1742, 2507, 2792, 3278, 4288
Hpy166II GTNNAC 3 cut(s) 2103, 2843, 4046
Hpy8I GTNNAC 3 cut(s) 2103, 2843, 4046
HpyCH4IV ACGT 1 cut(s) 4233
HpyF10VI GCNNNNNNNGC 9 cut(s) 14, 64, 506, 755, 881, 1321, 1540, 2147, 2529
HpySE526I ACGT 1 cut(s) 4233
HspAI GCGC 2 cut(s) 90, 1645
Ksp22I TGATCA 2 cut(s) 1630, 3496
LmnI GCTCC 7 cut(s) 64, 430, 679, 3195, 3462, 3819, 3922
MaeI CTAG 9 cut(s) 1428, 1938, 2550, 2690, 3009, 3399, 3926, 4058, 4347
MaeII ACGT 1 cut(s) 4233
MfeI CAATTG 4 cut(s) 12, 602, 1082, 2247
MflI RGATCY 3 cut(s) 1162, 1834, 1901
MhlI GDGCHC 4 cut(s) 1946, 2021, 3050, 3251
MlsI TGGCCA 1 cut(s) 1173
MluNI TGGCCA 1 cut(s) 1173
MlyI GAGTC 6 cut(s) 617, 1283, 1940, 2252, 3218, 3853
MmeI TCCRAC 6 cut(s) 48, 834, 1602, 2118, 3237, 3960
Mox20I TGGCCA 1 cut(s) 1173
MroXI GAANNNNTTC 4 cut(s) 180, 3114, 3611, 3969
MscI TGGCCA 1 cut(s) 1173
MslI CAYNNNNRTG 3 cut(s) 1652, 3481, 4184
Msp20I TGGCCA 1 cut(s) 1173
MspA1I CMGCKG 2 cut(s) 1516, 3979
MspI CCGG 2 cut(s) 59, 2345
MspR9I CCNGG 4 cut(s) 1167, 1711, 2858, 4274
MunI CAATTG 4 cut(s) 12, 602, 1082, 2247
MvaI CCWGG 4 cut(s) 1167, 1711, 2858, 4274
MwoI GCNNNNNNNGC 9 cut(s) 14, 64, 506, 755, 881, 1321, 1540, 2147, 2529
NcoI CCATGG 1 cut(s) 1350
NlaIV GGNNCC 6 cut(s) 66, 1164, 2035, 3837, 4144, 4320
NmuCI GTSAC 6 cut(s) 2747, 2789, 3392, 3637, 4133, 4177
NspI RCATGY 6 cut(s) 1160, 1547, 1960, 3202, 3247, 3584
PaeI GCATGC 1 cut(s) 1547
PaeR7I CTCGAG 1 cut(s) 3668
PagI TCATGA 2 cut(s) 1719, 3645
PaqCI CACCTGC 1 cut(s) 335
PciI ACATGT 2 cut(s) 1956, 3243
PdmI GAANNNNTTC 4 cut(s) 180, 3114, 3611, 3969
PinAI ACCGGT 1 cut(s) 2344
PleI GAGTC 6 cut(s) 617, 1283, 1939, 2251, 3217, 3852
PpsI GAGTC 6 cut(s) 617, 1283, 1939, 2251, 3217, 3852
PpuMI RGGWCCY 2 cut(s) 2686, 3836
PscI ACATGT 2 cut(s) 1956, 3243
PshAI GACNNNNGTC 1 cut(s) 3959
Psp5II RGGWCCY 2 cut(s) 2686, 3836
Psp6I CCWGG 4 cut(s) 1165, 1709, 2856, 4272
PspFI CCCAGC 2 cut(s) 2870, 4189
PspGI CCWGG 4 cut(s) 1165, 1709, 2856, 4272
PspN4I GGNNCC 6 cut(s) 66, 1164, 2035, 3837, 4144, 4320
PspPI GGNCC 7 cut(s) 1347, 1865, 2686, 3836, 3954, 4143, 4270
PspPPI RGGWCCY 2 cut(s) 2686, 3836
PstI CTGCAG 1 cut(s) 1773
PstNI CAGNNNCTG 1 cut(s) 3731
PsuI RGATCY 3 cut(s) 1162, 1834, 1901
PvuII CAGCTG 2 cut(s) 1516, 3979
RsaI GTAC 2 cut(s) 1987, 2175
RsaNI GTAC 2 cut(s) 1986, 2174
RseI CAYNNNNRTG 3 cut(s) 1652, 3481, 4184
Sau96I GGNCC 7 cut(s) 1347, 1865, 2686, 3836, 3954, 4143, 4270
SchI GAGTC 6 cut(s) 617, 1283, 1940, 2252, 3218, 3853
ScrFI CCNGG 4 cut(s) 1167, 1711, 2858, 4274
SduI GDGCHC 4 cut(s) 1946, 2021, 3050, 3251
SfcI CTRYAG 5 cut(s) 1769, 2635, 2829, 3780, 4313
Sfr274I CTCGAG 1 cut(s) 3668
SinI GGWCC 5 cut(s) 1865, 2686, 3836, 3954, 4143
SlaI CTCGAG 1 cut(s) 3668
SmiMI CAYNNNNRTG 3 cut(s) 1652, 3481, 4184
SmlI CTYRAG 8 cut(s) 203, 329, 425, 674, 2363, 2960, 3668, 4102
SmoI CTYRAG 8 cut(s) 203, 329, 425, 674, 2363, 2960, 3668, 4102
SpeI ACTAGT 1 cut(s) 2549
SphI GCATGC 1 cut(s) 1547
SsiI CCGC 9 cut(s) 47, 142, 272, 584, 734, 1160, 2492, 2945, 4268
SspI AATATT 4 cut(s) 568, 817, 2956, 4240
SspMI CTAG 9 cut(s) 1428, 1938, 2550, 2690, 3009, 3399, 3926, 4058, 4347
StyD4I CCNGG 4 cut(s) 1165, 1709, 2856, 4272
StyI CCWWGG 7 cut(s) 1350, 1753, 1937, 2846, 3313, 3561, 4039
TaiI ACGT 1 cut(s) 4236
TaqI TCGA 8 cut(s) 918, 1440, 1456, 2544, 3238, 3354, 3669, 3963
TatI WGTACW 1 cut(s) 1985
TauI GCSGC 3 cut(s) 50, 275, 4271
TscAI CASTG 9 cut(s) 765, 1903, 2164, 2992, 3050, 3258, 3894, 3964, 4153
TseFI GTSAC 6 cut(s) 2747, 2789, 3392, 3637, 4133, 4177
Tsp45I GTSAC 6 cut(s) 2747, 2789, 3392, 3637, 4133, 4177
TspGWI ACGGA 5 cut(s) 145, 188, 3160, 3732, 4234
TspRI CASTG 9 cut(s) 765, 1903, 2164, 2992, 3050, 3258, 3894, 3964, 4153
VpaK11BI GGWCC 5 cut(s) 1865, 2686, 3836, 3954, 4143
XagI CCTNNNNNAGG 1 cut(s) 164
XceI RCATGY 6 cut(s) 1160, 1547, 1960, 3202, 3247, 3584
XcmI CCANNNNNNNNNTGG 1 cut(s) 3220
XhoI CTCGAG 1 cut(s) 3668
XmaJI CCTAGG 1 cut(s) 1937
XmiI GTMKAC 1 cut(s) 2102
XmnI GAANNNNTTC 4 cut(s) 180, 3114, 3611, 3969
XspI CTAG 9 cut(s) 1428, 1938, 2550, 2690, 3009, 3399, 3926, 4058, 4347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.