Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0009867

Physical Location & Seq

Genomic Coordinates Reverse (-)

41518422 .. 41520973

Gene Structure 2552 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1281200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGTCGTCTCTGCGCTCAGATCTGACCTTCTCCTCCAGAGTTTACCCGGAACCCTACTCCTCCGTCGACGATGACCTCTTCGATCTCATCCCGGACTCCCTCCTCCTCCTCGTCTTCAACAAGATCGGCGACGTCAAGGCCCTCGGCCGCTGCTGCGTCGTTTCCCGCCGCTTCCACTCCCTCGTCCCCCAGGTTGAAAACGTTGTCGTCCGCGTCGACTGCGTCATCTCCGACGATGATTCCTCCCCCTCCGCCTCCTCGTCTTCCTCCTCCGACAAGTCCCGGACCCCCTTCTCTGCCCTCTTCCGCCTCGTCCTCAGCGGCATTGTCAAGCCTCTGCAGGCGCTCGGCCAGTTCCTGGGACCCAACCGGCGATCCCCGAATGGGTCCCACTCCGCTCTCGCCGTCGATGACCCAGATTCCTCCGCCGCCGACAGCAACAGCCTTGACCAATCCGGCGTCACCCACCACTCCCCCACCCAAGTCTTGAAGAACTTCAACGAGATTCGATTCCTCCGGATCGAGCTTCCCAACGGCGAGCTAGGCATCGACGACGGCGTTTTGCTCAGGTGGAGGGCGGATTTCGGCTCCACCTTAGACAACTGCGTCATCCTCGGCGCCTCCTCCGTCATACACCCGGGACCCACCAAAGCATCGCTGTTTCCGGACACTTGGTCTGATGGGTTGTGCACCACCAACAACGCAGCCGTGGCGGAAGATAACGGAAGCATACCCGACTCGTTTTACACCAACGGCGGCCTGAAGCTGAGGGTTGTCTGGACGATCAGCTCGTTGATCGCCGCCTCCGCCAGGCACTACCTGCTTCAGCCCATCATTTCGGAGCACAAAACGCTAGACAGCTTGGTTCTGACGGATGCCGACGGGCAGGGGGTGTTGCACATGAACAGGGACCAGCTCGAGGAGCTGCGGGTGAAGCCATTGTCGGCCTCCTTGGCCTCGAAGAGGACGCTCGTGCCGGCCCTGAACATGCGGCTCTGGTATGCTCCCCAGCTGGAATTGCCTGATGGGGTTGTGCTAAAGGGCGCCACTTTGGTTGCTATAAGGCCCAGCGAGCAATCTCTGACCGCCAAGAAGGAGGTTTCCTCTGATATGTCCTGGGTTTCGACCGCCTTCGAAGAGCCGTACGGGACGGCGGCCAAGATGCTGGTCAAGAGGCGCACTTACTGTCTTGAGATGAACTCCTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005911 GO:0006810 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0009266 GO:0009408 GO:0009506 GO:0009628 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009914 GO:0009987 GO:0010033 GO:0010286 GO:0010817 GO:0023052 GO:0030054 GO:0032870 GO:0042221 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071368 GO:0071495

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box-like

Protein Analysis

403

Amino Acids

43.72

Weight (kDa)

5.53

Isoelectric Point (pI)

50.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009867)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30200 AT1G30200 AT4G18380 AT4G18380 AT5G46170
fragaria_vesca	FvH4_3g05230
malus_domestica	MD05G1281200.v1.1 MD10G1259600.v1.1
prunus_persica	Prupe.4G083400_v2.0.a1
pyrus_communis	pycom05g26130 pycom10g21600
rosa_chinensis	RchiOBHm_Chr5g0014481
rosa_laevigata	RLG00000032115
rosa_multiflora	Rmu_sc0017039.1_g000005
rosa_roxburghii	Rroxscaffold_1G00062070
rosa_rugosa	Rorug05G0018400
rosa_samantha	Rh5AG113700 Rh5BG110300 Rh5CG122200 Rh5DG109600
rosa_wichuraiana	Rw5G009860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	605
AatII	GACGTC	1 cut(s)	135
Acc36I	ACCTGC	1 cut(s)	828
AccB1I	GGYRCC	2 cut(s)	617, 1043
AccB7I	CCANNNNNTGG	1 cut(s)	358
AccBSI	CCGCTC	1 cut(s)	398
AccI	GTMKAC	2 cut(s)	66, 216
AccII	CGCG	1 cut(s)	213
AccIII	TCCGGA	2 cut(s)	516, 664
AclI	AACGTT	1 cut(s)	201
AclWI	GGATC	2 cut(s)	369, 527
AcoI	YGGCCR	3 cut(s)	145, 349, 1155
AcuI	CTGAAG	2 cut(s)	782, 809
AcyI	GRCGYC	4 cut(s)	132, 459, 618, 1044
AfaI	GTAC	1 cut(s)	1145
AfiI	CCNNNNNNNGG	5 cut(s)	358, 384, 810, 919, 963
AgsI	TTSAA	4 cut(s)	118, 197, 490, 499
AhdI	GACNNNNNGTC	1 cut(s)	673
AjnI	CCWGG	4 cut(s)	189, 357, 809, 1115
AluBI	AGCT	8 cut(s)	526, 541, 766, 789, 861, 916, 925, 1012
AluI	AGCT	8 cut(s)	526, 541, 766, 789, 861, 916, 925, 1012
Alw21I	GWGCWC	2 cut(s)	692, 846
Alw26I	GTCTC	1 cut(s)	12
Alw44I	GTGCAC	1 cut(s)	688
AlwI	GGATC	2 cut(s)	369, 527
AlwNI	CAGNNNCTG	1 cut(s)	358
Ama87I	CYCGRG	2 cut(s)	637, 917
Aor13HI	TCCGGA	2 cut(s)	516, 664
AoxI	GGCC	9 cut(s)	138, 145, 349, 757, 945, 954, 978, 1064, 1155
ApaLI	GTGCAC	1 cut(s)	688
ApeKI	GCWGC	4 cut(s)	150, 153, 704, 925
Asp700I	GAANNNNTTC	2 cut(s)	494, 1202
AspLEI	GCGC	5 cut(s)	15, 346, 620, 1046, 1179
AspS9I	GGNCC	8 cut(s)	139, 285, 362, 387, 641, 910, 979, 1065
AsuC2I	CCSGG	5 cut(s)	47, 92, 283, 638, 639
AsuHPI	GGTGA	2 cut(s)	454, 943
AsuII	TTCGAA	1 cut(s)	1134
AvaI	CYCGRG	2 cut(s)	637, 917
AvaII	GGWCC	5 cut(s)	285, 362, 387, 641, 910
BaeGI	GKGCMC	1 cut(s)	692
BanI	GGYRCC	2 cut(s)	617, 1043
BauI	CACGAG	1 cut(s)	971
BbsI	GAAGAC	2 cut(s)	106, 255
Bbv12I	GWGCWC	2 cut(s)	692, 846
BbvCI	CCTCAGC	2 cut(s)	317, 767
BbvI	GCAGC	4 cut(s)	137, 140, 716, 912
BccI	CCATC	3 cut(s)	674, 839, 1019
BceAI	ACGGC	7 cut(s)	389, 550, 571, 692, 769, 1126, 1167
BciT130I	CCWGG	4 cut(s)	191, 359, 811, 1117
BcnI	CCSGG	5 cut(s)	47, 92, 283, 638, 639
BcoDI	GTCTC	1 cut(s)	12
BfaI	CTAG	2 cut(s)	542, 854
BfmI	CTRYAG	1 cut(s)	338
BfoI	RGCGCY	3 cut(s)	347, 621, 1047
BfuAI	ACCTGC	1 cut(s)	828
BglI	GCCNNNNNGGC	1 cut(s)	953
BglII	AGATCT	1 cut(s)	19
Bme1390I	CCNGG	9 cut(s)	47, 92, 191, 283, 359, 638, 639, 811, 1117
Bme18I	GGWCC	5 cut(s)	285, 362, 387, 641, 910
BmeRI	GACNNNNNGTC	1 cut(s)	673
BmeT110I	CYCGRG	2 cut(s)	637, 917
BmgT120I	GGNCC	8 cut(s)	139, 285, 362, 387, 641, 910, 979, 1065
BmrFI	CCNGG	9 cut(s)	47, 92, 191, 283, 359, 638, 639, 811, 1117
BmsI	GCATC	4 cut(s)	555, 662, 865, 1152
BpiI	GAAGAC	2 cut(s)	106, 255
BplI	GAGNNNNNCTC	3 cut(s)	1088, 1120, 1184
BpmI	CTGGAG	1 cut(s)	19
Bpu10I	CCTNAGC	3 cut(s)	317, 566, 767
Bpu14I	TTCGAA	1 cut(s)	1134
BpuMI	CCSGG	5 cut(s)	47, 92, 283, 638, 639
BsaHI	GRCGYC	4 cut(s)	132, 459, 618, 1044
BsaJI	CCNNGG	8 cut(s)	142, 189, 358, 613, 637, 708, 951, 1116
BsaWI	WCCGGW	2 cut(s)	516, 664
Bsc4I	CCNNNNNNNGG	5 cut(s)	358, 384, 810, 919, 963
Bse118I	RCCGGY	2 cut(s)	369, 976
Bse1I	ACTGG	1 cut(s)	352
BseAI	TCCGGA	2 cut(s)	516, 664
BseBI	CCWGG	4 cut(s)	191, 359, 811, 1117
BseDI	CCNNGG	8 cut(s)	142, 189, 358, 613, 637, 708, 951, 1116
BseGI	GGATG	3 cut(s)	87, 609, 880
BseLI	CCNNNNNNNGG	5 cut(s)	358, 384, 810, 919, 963
BseMII	CTCAG	4 cut(s)	30, 331, 580, 758
BseNI	ACTGG	1 cut(s)	352
BseRI	GAGGAG	9 cut(s)	22, 49, 92, 95, 98, 247, 259, 613, 935
BseSI	GKGCMC	1 cut(s)	692
BseX3I	CGGCCG	1 cut(s)	145
BseXI	GCAGC	4 cut(s)	137, 140, 716, 912
BseYI	CCCAGC	2 cut(s)	1008, 1067
Bsh1236I	CGCG	1 cut(s)	213
Bsh1285I	CGRYCG	2 cut(s)	148, 1128
BshFI	GGCC	9 cut(s)	140, 147, 351, 759, 947, 956, 980, 1066, 1157
BshNI	GGYRCC	2 cut(s)	617, 1043
BsiEI	CGRYCG	2 cut(s)	148, 1128
BsiHKAI	GWGCWC	2 cut(s)	692, 846
BsiHKCI	CYCGRG	2 cut(s)	637, 917
BsiSI	CCGG	9 cut(s)	47, 92, 283, 370, 456, 517, 638, 665, 977
BsiWI	CGTACG	1 cut(s)	1143
BslFI	GGGAC	7 cut(s)	170, 265, 373, 375, 654, 923, 1162
BslI	CCNNNNNNNGG	5 cut(s)	358, 384, 810, 919, 963
BsmAI	GTCTC	1 cut(s)	12
BsmBI	CGTCTC	1 cut(s)	12
BsmFI	GGGAC	7 cut(s)	170, 265, 373, 375, 654, 923, 1162
BsnI	GGCC	9 cut(s)	140, 147, 351, 759, 947, 956, 980, 1066, 1157
BsoBI	CYCGRG	2 cut(s)	637, 917
Bsp119I	TTCGAA	1 cut(s)	1134
Bsp1286I	GDGCHC	2 cut(s)	692, 846
Bsp13I	TCCGGA	2 cut(s)	516, 664
Bsp143I	GATC	7 cut(s)	19, 82, 123, 374, 519, 783, 795
BspANI	GGCC	9 cut(s)	140, 147, 351, 759, 947, 956, 980, 1066, 1157
BspCNI	CTCAG	4 cut(s)	29, 330, 579, 759
BspEI	TCCGGA	2 cut(s)	516, 664
BspFNI	CGCG	1 cut(s)	213
BspMAI	CTGCAG	1 cut(s)	342
BspMI	ACCTGC	1 cut(s)	828
BspPI	GGATC	2 cut(s)	369, 527
BspQI	GCTCTTC	1 cut(s)	1131
BspT104I	TTCGAA	1 cut(s)	1134
BspT107I	GGYRCC	2 cut(s)	617, 1043
BsrBI	CCGCTC	1 cut(s)	398
BsrFI	RCCGGY	2 cut(s)	369, 976
BsrI	ACTGG	1 cut(s)	352
BssAI	RCCGGY	2 cut(s)	369, 976
BssECI	CCNNGG	8 cut(s)	142, 189, 358, 613, 637, 708, 951, 1116
BssMI	GATC	7 cut(s)	19, 82, 123, 374, 519, 783, 795
BssNI	GRCGYC	4 cut(s)	132, 459, 618, 1044
BssSI	CACGAG	1 cut(s)	971
BssT1I	CCWWGG	1 cut(s)	951
Bst2BI	CACGAG	1 cut(s)	971
Bst2UI	CCWGG	4 cut(s)	191, 359, 811, 1117
Bst4CI	ACNGT	1 cut(s)	1187
Bst6I	CTCTTC	4 cut(s)	83, 308, 956, 1131
BstACI	GRCGYC	4 cut(s)	132, 459, 618, 1044
BstAPI	GCANNNNNTGC	1 cut(s)	820
BstBI	TTCGAA	1 cut(s)	1134
BstC8I	GCNNGC	4 cut(s)	342, 539, 978, 1073
BstDEI	CTNAG	5 cut(s)	16, 317, 566, 595, 767
BstDSI	CCRYGG	1 cut(s)	708
BstENI	CCTNNNNNAGG	2 cut(s)	808, 961
BstF5I	GGATG	3 cut(s)	87, 609, 880
BstFNI	CGCG	1 cut(s)	213
BstH2I	RGCGCY	3 cut(s)	347, 621, 1047
BstHHI	GCGC	5 cut(s)	15, 346, 620, 1046, 1179
BstKTI	GATC	7 cut(s)	22, 85, 126, 377, 522, 786, 798
BstMAI	GTCTC	1 cut(s)	12
BstMBI	GATC	7 cut(s)	19, 82, 123, 374, 519, 783, 795
BstMCI	CGRYCG	2 cut(s)	148, 1128
BstNI	CCWGG	4 cut(s)	191, 359, 811, 1117
BstNSI	RCATGY	1 cut(s)	991
BstSCI	CCNGG	9 cut(s)	45, 90, 189, 281, 357, 636, 637, 809, 1115
BstSFI	CTRYAG	1 cut(s)	338
BstSLI	GKGCMC	1 cut(s)	692
BstUI	CGCG	1 cut(s)	213
BstV1I	GCAGC	4 cut(s)	137, 140, 716, 912
BstV2I	GAAGAC	2 cut(s)	106, 255
BstX2I	RGATCY	1 cut(s)	19
BstXI	CCANNNNNNTGG	1 cut(s)	1165
BstYI	RGATCY	1 cut(s)	19
BstZI	CGGCCG	1 cut(s)	145
BsuRI	GGCC	9 cut(s)	140, 147, 351, 759, 947, 956, 980, 1066, 1157
BtgI	CCRYGG	1 cut(s)	708
BtgZI	GCGATG	1 cut(s)	639
BtsCI	GGATG	3 cut(s)	87, 609, 880
BveI	ACCTGC	1 cut(s)	828
Cac8I	GCNNGC	4 cut(s)	342, 539, 978, 1073
CaiI	CAGNNNCTG	1 cut(s)	358
CfoI	GCGC	5 cut(s)	15, 346, 620, 1046, 1179
Cfr10I	RCCGGY	2 cut(s)	369, 976
Cfr13I	GGNCC	8 cut(s)	139, 285, 362, 387, 641, 910, 979, 1065
Cfr9I	CCCGGG	1 cut(s)	637
CseI	GACGC	6 cut(s)	145, 202, 211, 448, 595, 976
Csp6I	GTAC	1 cut(s)	1144
CspCI	CAANNNNNGTGG	2 cut(s)	1036, 1071
CviAII	CATG	2 cut(s)	901, 988
CviQI	GTAC	1 cut(s)	1144
DdeI	CTNAG	5 cut(s)	16, 317, 566, 595, 767
DinI	GGCGCC	2 cut(s)	619, 1045
DpnI	GATC	7 cut(s)	21, 84, 125, 376, 521, 785, 797
DpnII	GATC	7 cut(s)	19, 82, 123, 374, 519, 783, 795
DrdI	GACNNNNNNGTC	1 cut(s)	605
DriI	GACNNNNNGTC	1 cut(s)	673
DseDI	GACNNNNNNGTC	1 cut(s)	605
EaeI	YGGCCR	3 cut(s)	145, 349, 1155
EagI	CGGCCG	1 cut(s)	145
Eam1104I	CTCTTC	4 cut(s)	83, 308, 956, 1131
Eam1105I	GACNNNNNGTC	1 cut(s)	673
EarI	CTCTTC	4 cut(s)	83, 308, 956, 1131
EciI	GGCGGA	6 cut(s)	241, 296, 415, 593, 728, 796
EclXI	CGGCCG	1 cut(s)	145
Eco130I	CCWWGG	1 cut(s)	951
Eco47I	GGWCC	5 cut(s)	285, 362, 387, 641, 910
Eco52I	CGGCCG	1 cut(s)	145
Eco57I	CTGAAG	2 cut(s)	782, 809
Eco88I	CYCGRG	2 cut(s)	637, 917
EcoNI	CCTNNNNNAGG	2 cut(s)	808, 961
EcoO109I	RGGNCCY	4 cut(s)	139, 362, 387, 641
EcoRII	CCWGG	4 cut(s)	189, 357, 809, 1115
EcoT14I	CCWWGG	1 cut(s)	951
EgeI	GGCGCC	2 cut(s)	619, 1045
EheI	GGCGCC	2 cut(s)	619, 1045
ErhI	CCWWGG	1 cut(s)	951
Esp3I	CGTCTC	1 cut(s)	12
FaeI	CATG	2 cut(s)	904, 991
FaiI	YATR	7 cut(s)	632, 731, 902, 989, 1002, 1061, 1112
FaqI	GGGAC	7 cut(s)	170, 265, 373, 375, 654, 923, 1162
FatI	CATG	2 cut(s)	900, 987
FauI	CCCGC	2 cut(s)	173, 921
FblI	GTMKAC	2 cut(s)	66, 216
FokI	GGATG	3 cut(s)	74, 596, 887
FspBI	CTAG	2 cut(s)	542, 854
GlaI	GCGC	5 cut(s)	14, 345, 619, 1045, 1178
GsaI	CCCAGC	2 cut(s)	1012, 1071
GsuI	CTGGAG	1 cut(s)	19
HaeII	RGCGCY	3 cut(s)	347, 621, 1047
HaeIII	GGCC	9 cut(s)	140, 147, 351, 759, 947, 956, 980, 1066, 1157
HapII	CCGG	9 cut(s)	47, 92, 283, 370, 456, 517, 638, 665, 977
HgaI	GACGC	6 cut(s)	145, 202, 211, 448, 595, 976
HhaI	GCGC	5 cut(s)	15, 346, 620, 1046, 1179
Hin1I	GRCGYC	4 cut(s)	132, 459, 618, 1044
Hin1II	CATG	2 cut(s)	904, 991
Hin6I	GCGC	5 cut(s)	13, 344, 618, 1044, 1177
HinP1I	GCGC	5 cut(s)	13, 344, 618, 1044, 1177
HincII	GTYRAC	2 cut(s)	67, 217
HindII	GTYRAC	2 cut(s)	67, 217
HinfI	GANTC	6 cut(s)	95, 239, 419, 505, 510, 737
HpaII	CCGG	9 cut(s)	47, 92, 283, 370, 456, 517, 638, 665, 977
HphI	GGTGA	2 cut(s)	454, 943
Hpy166II	GTNNAC	4 cut(s)	43, 67, 217, 690
Hpy188III	TCNNGA	7 cut(s)	36, 487, 517, 665, 778, 1171, 1190
Hpy8I	GTNNAC	4 cut(s)	43, 67, 217, 690
HpyAV	CCTTC	4 cut(s)	37, 301, 1087, 1141
HpyCH4III	ACNGT	1 cut(s)	1187
HpyCH4IV	ACGT	2 cut(s)	132, 201
HpyCH4V	TGCA	3 cut(s)	340, 690, 898
HpyF3I	CTNAG	5 cut(s)	16, 317, 566, 595, 767
HpySE526I	ACGT	2 cut(s)	132, 201
Hsp92I	GRCGYC	4 cut(s)	132, 459, 618, 1044
Hsp92II	CATG	2 cut(s)	904, 991
HspAI	GCGC	5 cut(s)	13, 344, 618, 1044, 1177
KasI	GGCGCC	2 cut(s)	617, 1043
KflI	GGGWCCC	3 cut(s)	362, 387, 641
Kpn2I	TCCGGA	2 cut(s)	516, 664
KroI	GCCGGC	1 cut(s)	976
KroNI	GCCGGC	1 cut(s)	978
Kzo9I	GATC	7 cut(s)	19, 82, 123, 374, 519, 783, 795
LguI	GCTCTTC	1 cut(s)	1131
LmnI	GCTCC	4 cut(s)	593, 841, 922, 1009
Lsp1109I	GCAGC	4 cut(s)	137, 140, 716, 912
LweI	GCATC	4 cut(s)	555, 662, 865, 1152
MaeI	CTAG	2 cut(s)	542, 854
MaeII	ACGT	2 cut(s)	132, 201
MaeIII	GTNAC	1 cut(s)	460
MalI	GATC	7 cut(s)	21, 84, 125, 376, 521, 785, 797
MbiI	CCGCTC	1 cut(s)	398
MboI	GATC	7 cut(s)	19, 82, 123, 374, 519, 783, 795
MboII	GAAGA	8 cut(s)	70, 106, 255, 295, 502, 728, 973, 1148
MflI	RGATCY	1 cut(s)	19
MhlI	GDGCHC	2 cut(s)	692, 846
MluCI	AATT	1 cut(s)	1016
Mly113I	GGCGCC	2 cut(s)	618, 1044
MlyI	GAGTC	2 cut(s)	89, 731
MmeI	TCCRAC	2 cut(s)	255, 297
MroI	TCCGGA	2 cut(s)	516, 664
MroNI	GCCGGC	1 cut(s)	976
MroXI	GAANNNNTTC	2 cut(s)	494, 1202
MspA1I	CMGCKG	3 cut(s)	150, 321, 1012
MspI	CCGG	9 cut(s)	47, 92, 283, 370, 456, 517, 638, 665, 977
MspR9I	CCNGG	9 cut(s)	47, 92, 191, 283, 359, 638, 639, 811, 1117
MvaI	CCWGG	4 cut(s)	191, 359, 811, 1117
MvnI	CGCG	1 cut(s)	213
NaeI	GCCGGC	1 cut(s)	978
NarI	GGCGCC	2 cut(s)	618, 1044
NciI	CCSGG	5 cut(s)	47, 92, 283, 638, 639
NdeII	GATC	7 cut(s)	19, 82, 123, 374, 519, 783, 795
NgoMIV	GCCGGC	1 cut(s)	976
NlaIII	CATG	2 cut(s)	904, 991
NmeAIII	GCCGAG	3 cut(s)	123, 327, 594
NmuCI	GTSAC	1 cut(s)	460
NspI	RCATGY	1 cut(s)	991
NspV	TTCGAA	1 cut(s)	1134
PaeR7I	CTCGAG	1 cut(s)	917
PciSI	GCTCTTC	1 cut(s)	1131
PcsI	WCGNNNNNNNCGW	3 cut(s)	213, 555, 788
PdiI	GCCGGC	1 cut(s)	978
PdmI	GAANNNNTTC	2 cut(s)	494, 1202
PfeI	GAWTC	4 cut(s)	239, 419, 505, 510
Pfl23II	CGTACG	1 cut(s)	1143
PflFI	GACNNNGTC	1 cut(s)	221
PflMI	CCANNNNNTGG	1 cut(s)	358
PfoI	TCCNGGA	2 cut(s)	90, 281
PleI	GAGTC	2 cut(s)	89, 731
PluTI	GGCGCC	2 cut(s)	621, 1047
PpsI	GAGTC	2 cut(s)	89, 731
PpuMI	RGGWCCY	3 cut(s)	362, 387, 641
Psp1406I	AACGTT	1 cut(s)	201
Psp5II	RGGWCCY	3 cut(s)	362, 387, 641
Psp6I	CCWGG	4 cut(s)	189, 357, 809, 1115
PspFI	CCCAGC	2 cut(s)	1008, 1067
PspGI	CCWGG	4 cut(s)	189, 357, 809, 1115
PspLI	CGTACG	1 cut(s)	1143
PspPI	GGNCC	8 cut(s)	139, 285, 362, 387, 641, 910, 979, 1065
PspPPI	RGGWCCY	3 cut(s)	362, 387, 641
PspXI	VCTCGAGB	1 cut(s)	917
PstI	CTGCAG	1 cut(s)	342
PstNI	CAGNNNCTG	1 cut(s)	358
PsuI	RGATCY	1 cut(s)	19
PsyI	GACNNNGTC	1 cut(s)	221
PvuII	CAGCTG	1 cut(s)	1012
RsaI	GTAC	1 cut(s)	1145
RsaNI	GTAC	1 cut(s)	1144
SalI	GTCGAC	2 cut(s)	65, 215
SapI	GCTCTTC	1 cut(s)	1131
Sau3AI	GATC	7 cut(s)	19, 82, 123, 374, 519, 783, 795
Sau96I	GGNCC	8 cut(s)	139, 285, 362, 387, 641, 910, 979, 1065
SchI	GAGTC	2 cut(s)	89, 731
ScrFI	CCNGG	9 cut(s)	47, 92, 191, 283, 359, 638, 639, 811, 1117
SduI	GDGCHC	2 cut(s)	692, 846
SfaNI	GCATC	4 cut(s)	555, 662, 865, 1152
SfcI	CTRYAG	1 cut(s)	338
SfiI	GGCCNNNNNGGCC	1 cut(s)	953
SfoI	GGCGCC	2 cut(s)	619, 1045
Sfr274I	CTCGAG	1 cut(s)	917
SfuI	TTCGAA	1 cut(s)	1134
SgrDI	CGTCGACG	1 cut(s)	65
SinI	GGWCC	5 cut(s)	285, 362, 387, 641, 910
SlaI	CTCGAG	1 cut(s)	917
SmaI	CCCGGG	1 cut(s)	639
SmlI	CTYRAG	2 cut(s)	917, 1190
SmoI	CTYRAG	2 cut(s)	917, 1190
Sse9I	AATT	1 cut(s)	1016
SspDI	GGCGCC	2 cut(s)	617, 1043
SspMI	CTAG	2 cut(s)	542, 854
StyD4I	CCNGG	9 cut(s)	45, 90, 189, 281, 357, 636, 637, 809, 1115
StyI	CCWWGG	1 cut(s)	951
TaaI	ACNGT	1 cut(s)	1187
TaiI	ACGT	2 cut(s)	135, 204
TasI	AATT	1 cut(s)	1016
TauI	GCSGC	8 cut(s)	150, 171, 324, 431, 759, 803, 994, 1157
TfiI	GAWTC	4 cut(s)	239, 419, 505, 510
TseFI	GTSAC	1 cut(s)	460
TseI	GCWGC	4 cut(s)	150, 153, 704, 925
Tsp45I	GTSAC	1 cut(s)	460
TspDTI	ATGAA	1 cut(s)	917
TspGWI	ACGGA	4 cut(s)	52, 616, 738, 887
TspMI	CCCGGG	1 cut(s)	637
Tth111I	GACNNNGTC	1 cut(s)	221
Van91I	CCANNNNNTGG	1 cut(s)	358
VneI	GTGCAC	1 cut(s)	688
VpaK11BI	GGWCC	5 cut(s)	285, 362, 387, 641, 910
XagI	CCTNNNNNAGG	2 cut(s)	808, 961
XceI	RCATGY	1 cut(s)	991
XhoI	CTCGAG	1 cut(s)	917
XmaI	CCCGGG	1 cut(s)	637
XmiI	GTMKAC	2 cut(s)	66, 216
XmnI	GAANNNNTTC	2 cut(s)	494, 1202
XspI	CTAG	2 cut(s)	542, 854
ZraI	GACGTC	1 cut(s)	133

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.