F-box protein At5g46170-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G30200 AT1G30200 AT4G18380 AT4G18380 AT5G46170 |
| fragaria_vesca | FvH4_3g05230 |
| malus_domestica | MD05G1281200.v1.1 MD10G1259600.v1.1 |
| prunus_persica | Prupe.4G083400_v2.0.a1 |
| pyrus_communis | pycom05g26130 pycom10g21600 |
| rosa_chinensis | RchiOBHm_Chr5g0014481 |
| rosa_laevigata | RLG00000032115 |
| rosa_multiflora | Rmu_sc0017039.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00062070 |
| rosa_rugosa | Rorug05G0018400 |
| rosa_samantha | Rh5AG113700 Rh5BG110300 Rh5CG122200 Rh5DG109600 |
| rosa_wichuraiana | Rw5G009860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 602 |
| AatII | GACGTC | 1 cut(s) | 129 |
| Acc36I | ACCTGC | 1 cut(s) | 825 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 355 |
| AccI | GTMKAC | 3 cut(s) | 39, 210, 405 |
| AccII | CGCG | 2 cut(s) | 207, 1001 |
| AccIII | TCCGGA | 1 cut(s) | 513 |
| AclWI | GGATC | 2 cut(s) | 366, 524 |
| AcoI | YGGCCR | 3 cut(s) | 346, 804, 1152 |
| AcsI | RAATTY | 1 cut(s) | 648 |
| AcuI | CTGAAG | 2 cut(s) | 779, 806 |
| AcyI | GRCGYC | 2 cut(s) | 126, 456 |
| AfaI | GTAC | 3 cut(s) | 896, 998, 1142 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 355, 381, 807, 916 |
| AflII | CTTAAG | 1 cut(s) | 485 |
| AgsI | TTSAA | 4 cut(s) | 112, 496, 1122, 1133 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 670 |
| AjnI | CCWGG | 3 cut(s) | 336, 354, 806 |
| AluBI | AGCT | 8 cut(s) | 441, 523, 538, 763, 786, 858, 913, 922 |
| AluI | AGCT | 8 cut(s) | 441, 523, 538, 763, 786, 858, 913, 922 |
| Alw21I | GWGCWC | 2 cut(s) | 525, 843 |
| Alw26I | GTCTC | 2 cut(s) | 12, 1102 |
| AlwI | GGATC | 2 cut(s) | 366, 524 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 355 |
| Ama87I | CYCGRG | 2 cut(s) | 33, 634 |
| Aor13HI | TCCGGA | 1 cut(s) | 513 |
| ApaI | GGGCCC | 2 cut(s) | 362, 388 |
| ApeKI | GCWGC | 4 cut(s) | 147, 435, 438, 797 |
| ApoI | RAATTY | 1 cut(s) | 648 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 56, 88, 183, 215 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1199 |
| AspA2I | CCTAGG | 1 cut(s) | 136 |
| AspLEI | GCGC | 4 cut(s) | 15, 689, 1003, 1176 |
| AsuC2I | CCSGG | 4 cut(s) | 86, 280, 635, 636 |
| AsuHPI | GGTGA | 2 cut(s) | 451, 940 |
| AvaI | CYCGRG | 2 cut(s) | 33, 634 |
| AvaII | GGWCC | 3 cut(s) | 282, 638, 907 |
| AvrII | CCTAGG | 1 cut(s) | 136 |
| BaeGI | GKGCMC | 2 cut(s) | 362, 388 |
| BanII | GRGCYC | 4 cut(s) | 51, 362, 388, 525 |
| BauI | CACGAG | 1 cut(s) | 968 |
| BbsI | GAAGAC | 1 cut(s) | 100 |
| Bbv12I | GWGCWC | 2 cut(s) | 525, 843 |
| BbvCI | CCTCAGC | 2 cut(s) | 764, 923 |
| BbvI | GCAGC | 4 cut(s) | 134, 447, 450, 784 |
| BccI | CCATC | 4 cut(s) | 671, 836, 872, 1016 |
| BceAI | ACGGC | 5 cut(s) | 386, 568, 689, 1123, 1164 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 424, 458 |
| BciT130I | CCWGG | 3 cut(s) | 338, 356, 808 |
| BclI | TGATCA | 1 cut(s) | 1164 |
| BcnI | CCSGG | 4 cut(s) | 86, 280, 635, 636 |
| BcoDI | GTCTC | 2 cut(s) | 12, 1102 |
| BfaI | CTAG | 3 cut(s) | 104, 137, 539 |
| BfrI | CTTAAG | 1 cut(s) | 485 |
| BfuAI | ACCTGC | 1 cut(s) | 825 |
| BglII | AGATCT | 1 cut(s) | 19 |
| BlnI | CCTAGG | 1 cut(s) | 136 |
| Bme1390I | CCNGG | 7 cut(s) | 86, 280, 338, 356, 635, 636, 808 |
| Bme18I | GGWCC | 3 cut(s) | 282, 638, 907 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 670 |
| BmeT110I | CYCGRG | 2 cut(s) | 33, 634 |
| BmrFI | CCNGG | 7 cut(s) | 86, 280, 338, 356, 635, 636, 808 |
| BmrI | ACTGGG | 1 cut(s) | 1059 |
| BmsI | GCATC | 4 cut(s) | 134, 552, 862, 1149 |
| BmuI | ACTGGG | 1 cut(s) | 1059 |
| BoxI | GACNNNNGTC | 1 cut(s) | 479 |
| BpiI | GAAGAC | 1 cut(s) | 100 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 1181 |
| BpmI | CTGGAG | 2 cut(s) | 320, 935 |
| Bpu10I | CCTNAGC | 2 cut(s) | 764, 923 |
| BpuEI | CTTGAG | 1 cut(s) | 462 |
| BpuMI | CCSGG | 4 cut(s) | 86, 280, 635, 636 |
| Bsa29I | ATCGAT | 1 cut(s) | 546 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1163 |
| BsaHI | GRCGYC | 2 cut(s) | 126, 456 |
| BsaI | GGTCTC | 1 cut(s) | 1102 |
| BsaJI | CCNNGG | 7 cut(s) | 136, 343, 355, 610, 621, 634, 801 |
| BsaWI | WCCGGW | 1 cut(s) | 513 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 355, 381, 807, 916 |
| Bse1I | ACTGG | 2 cut(s) | 349, 1065 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1163 |
| BseAI | TCCGGA | 1 cut(s) | 513 |
| BseBI | CCWGG | 3 cut(s) | 338, 356, 808 |
| BseCI | ATCGAT | 1 cut(s) | 546 |
| BseDI | CCNNGG | 7 cut(s) | 136, 343, 355, 610, 621, 634, 801 |
| BseGI | GGATG | 3 cut(s) | 419, 606, 627 |
| BseJI | GATNNNNATC | 1 cut(s) | 1163 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 355, 381, 807, 916 |
| BseMII | CTCAG | 3 cut(s) | 30, 755, 914 |
| BseNI | ACTGG | 2 cut(s) | 349, 1065 |
| BseRI | GAGGAG | 8 cut(s) | 19, 86, 89, 235, 244, 247, 610, 932 |
| BseSI | GKGCMC | 2 cut(s) | 362, 388 |
| BseXI | GCAGC | 4 cut(s) | 134, 447, 450, 784 |
| BseYI | CCCAGC | 1 cut(s) | 527 |
| Bsh1236I | CGCG | 2 cut(s) | 207, 1001 |
| Bsh1285I | CGRYCG | 1 cut(s) | 79 |
| BshVI | ATCGAT | 1 cut(s) | 546 |
| BsiEI | CGRYCG | 1 cut(s) | 79 |
| BsiHKAI | GWGCWC | 2 cut(s) | 525, 843 |
| BsiHKCI | CYCGRG | 2 cut(s) | 33, 634 |
| BsiSI | CCGG | 5 cut(s) | 86, 280, 453, 514, 635 |
| BsiWI | CGTACG | 1 cut(s) | 1140 |
| BslFI | GGGAC | 5 cut(s) | 164, 262, 651, 920, 1159 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 355, 381, 807, 916 |
| BsmAI | GTCTC | 2 cut(s) | 12, 1102 |
| BsmBI | CGTCTC | 1 cut(s) | 12 |
| BsmFI | GGGAC | 5 cut(s) | 164, 262, 651, 920, 1159 |
| Bso31I | GGTCTC | 1 cut(s) | 1102 |
| BsoBI | CYCGRG | 2 cut(s) | 33, 634 |
| Bsp120I | GGGCCC | 2 cut(s) | 358, 384 |
| Bsp1286I | GDGCHC | 5 cut(s) | 51, 362, 388, 525, 843 |
| Bsp13I | TCCGGA | 1 cut(s) | 513 |
| Bsp1407I | TGTACA | 1 cut(s) | 894 |
| Bsp143I | GATC | 8 cut(s) | 19, 76, 117, 371, 516, 792, 1105, 1164 |
| BspCNI | CTCAG | 3 cut(s) | 29, 756, 915 |
| BspDI | ATCGAT | 1 cut(s) | 546 |
| BspEI | TCCGGA | 1 cut(s) | 513 |
| BspFNI | CGCG | 2 cut(s) | 207, 1001 |
| BspMI | ACCTGC | 1 cut(s) | 825 |
| BspPI | GGATC | 2 cut(s) | 366, 524 |
| BspQI | GCTCTTC | 1 cut(s) | 1128 |
| BspTI | CTTAAG | 1 cut(s) | 485 |
| BspTNI | GGTCTC | 1 cut(s) | 1102 |
| BsrGI | TGTACA | 1 cut(s) | 894 |
| BsrI | ACTGG | 2 cut(s) | 349, 1065 |
| BssECI | CCNNGG | 7 cut(s) | 136, 343, 355, 610, 621, 634, 801 |
| BssMI | GATC | 8 cut(s) | 19, 76, 117, 371, 516, 792, 1105, 1164 |
| BssNI | GRCGYC | 2 cut(s) | 126, 456 |
| BssSI | CACGAG | 1 cut(s) | 968 |
| BssT1I | CCWWGG | 1 cut(s) | 136 |
| Bst2BI | CACGAG | 1 cut(s) | 968 |
| Bst2UI | CCWGG | 3 cut(s) | 338, 356, 808 |
| Bst4CI | ACNGT | 1 cut(s) | 1184 |
| Bst6I | CTCTTC | 6 cut(s) | 77, 305, 952, 953, 1105, 1128 |
| BstACI | GRCGYC | 2 cut(s) | 126, 456 |
| BstAFI | CTTAAG | 1 cut(s) | 485 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 817 |
| BstAUI | TGTACA | 1 cut(s) | 894 |
| BstC8I | GCNNGC | 2 cut(s) | 536, 975 |
| BstDEI | CTNAG | 4 cut(s) | 16, 592, 764, 923 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 805 |
| BstF5I | GGATG | 3 cut(s) | 419, 606, 627 |
| BstFNI | CGCG | 2 cut(s) | 207, 1001 |
| BstHHI | GCGC | 4 cut(s) | 15, 689, 1003, 1176 |
| BstKTI | GATC | 8 cut(s) | 22, 79, 120, 374, 519, 795, 1108, 1167 |
| BstMAI | GTCTC | 2 cut(s) | 12, 1102 |
| BstMBI | GATC | 8 cut(s) | 19, 76, 117, 371, 516, 792, 1105, 1164 |
| BstMCI | CGRYCG | 1 cut(s) | 79 |
| BstNI | CCWGG | 3 cut(s) | 338, 356, 808 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 479 |
| BstSCI | CCNGG | 7 cut(s) | 84, 278, 336, 354, 633, 634, 806 |
| BstSLI | GKGCMC | 2 cut(s) | 362, 388 |
| BstUI | CGCG | 2 cut(s) | 207, 1001 |
| BstV1I | GCAGC | 4 cut(s) | 134, 447, 450, 784 |
| BstV2I | GAAGAC | 1 cut(s) | 100 |
| BstX2I | RGATCY | 1 cut(s) | 19 |
| BstYI | RGATCY | 1 cut(s) | 19 |
| Bsu15I | ATCGAT | 1 cut(s) | 546 |
| BsuTUI | ATCGAT | 1 cut(s) | 546 |
| BtsCI | GGATG | 3 cut(s) | 419, 606, 627 |
| BtsIMutI | CAGTG | 1 cut(s) | 1072 |
| BveI | ACCTGC | 1 cut(s) | 825 |
| Cac8I | GCNNGC | 2 cut(s) | 536, 975 |
| CaiI | CAGNNNCTG | 1 cut(s) | 355 |
| CfoI | GCGC | 4 cut(s) | 15, 689, 1003, 1176 |
| Cfr9I | CCCGGG | 1 cut(s) | 634 |
| ClaI | ATCGAT | 1 cut(s) | 546 |
| CseI | GACGC | 6 cut(s) | 139, 196, 445, 592, 942, 973 |
| Csp6I | GTAC | 3 cut(s) | 895, 997, 1141 |
| CviAII | CATG | 3 cut(s) | 58, 898, 1113 |
| CviQI | GTAC | 3 cut(s) | 895, 997, 1141 |
| DdeI | CTNAG | 4 cut(s) | 16, 592, 764, 923 |
| DpnI | GATC | 8 cut(s) | 21, 78, 119, 373, 518, 794, 1107, 1166 |
| DpnII | GATC | 8 cut(s) | 19, 76, 117, 371, 516, 792, 1105, 1164 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 602 |
| DriI | GACNNNNNGTC | 1 cut(s) | 670 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 602 |
| EaeI | YGGCCR | 3 cut(s) | 346, 804, 1152 |
| Eam1104I | CTCTTC | 6 cut(s) | 77, 305, 952, 953, 1105, 1128 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 670 |
| EarI | CTCTTC | 6 cut(s) | 77, 305, 952, 953, 1105, 1128 |
| EciI | GGCGGA | 4 cut(s) | 238, 283, 293, 412 |
| Ecl136II | GAGCTC | 1 cut(s) | 523 |
| Eco130I | CCWWGG | 1 cut(s) | 136 |
| Eco147I | AGGCCT | 1 cut(s) | 756 |
| Eco24I | GRGCYC | 4 cut(s) | 51, 362, 388, 525 |
| Eco31I | GGTCTC | 1 cut(s) | 1102 |
| Eco47I | GGWCC | 3 cut(s) | 282, 638, 907 |
| Eco53kI | GAGCTC | 1 cut(s) | 523 |
| Eco57I | CTGAAG | 2 cut(s) | 779, 806 |
| Eco88I | CYCGRG | 2 cut(s) | 33, 634 |
| EcoICRI | GAGCTC | 1 cut(s) | 523 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 805 |
| EcoO109I | RGGNCCY | 5 cut(s) | 133, 340, 359, 384, 638 |
| EcoRII | CCWGG | 3 cut(s) | 336, 354, 806 |
| EcoT14I | CCWWGG | 1 cut(s) | 136 |
| EcoT38I | GRGCYC | 4 cut(s) | 51, 362, 388, 525 |
| ErhI | CCWWGG | 1 cut(s) | 136 |
| Esp3I | CGTCTC | 1 cut(s) | 12 |
| FaeI | CATG | 3 cut(s) | 61, 901, 1116 |
| FaiI | YATR | 5 cut(s) | 59, 728, 899, 986, 1114 |
| FaqI | GGGAC | 5 cut(s) | 164, 262, 651, 920, 1159 |
| FatI | CATG | 3 cut(s) | 57, 897, 1112 |
| FauI | CCCGC | 2 cut(s) | 167, 400 |
| FbaI | TGATCA | 1 cut(s) | 1164 |
| FblI | GTMKAC | 3 cut(s) | 39, 210, 405 |
| FokI | GGATG | 3 cut(s) | 406, 593, 614 |
| FriOI | GRGCYC | 4 cut(s) | 51, 362, 388, 525 |
| FspBI | CTAG | 3 cut(s) | 104, 137, 539 |
| GlaI | GCGC | 4 cut(s) | 14, 688, 1002, 1175 |
| GsaI | CCCAGC | 1 cut(s) | 531 |
| GsuI | CTGGAG | 2 cut(s) | 320, 935 |
| HapII | CCGG | 5 cut(s) | 86, 280, 453, 514, 635 |
| HgaI | GACGC | 6 cut(s) | 139, 196, 445, 592, 942, 973 |
| HhaI | GCGC | 4 cut(s) | 15, 689, 1003, 1176 |
| Hin1I | GRCGYC | 2 cut(s) | 126, 456 |
| Hin1II | CATG | 3 cut(s) | 61, 901, 1116 |
| Hin6I | GCGC | 4 cut(s) | 13, 687, 1001, 1174 |
| HinP1I | GCGC | 4 cut(s) | 13, 687, 1001, 1174 |
| HincII | GTYRAC | 2 cut(s) | 211, 406 |
| HindII | GTYRAC | 2 cut(s) | 211, 406 |
| HinfI | GANTC | 7 cut(s) | 36, 89, 233, 416, 475, 502, 734 |
| HpaII | CCGG | 5 cut(s) | 86, 280, 453, 514, 635 |
| HphI | GGTGA | 2 cut(s) | 451, 940 |
| Hpy166II | GTNNAC | 3 cut(s) | 40, 211, 406 |
| Hpy188III | TCNNGA | 6 cut(s) | 33, 514, 662, 775, 1168, 1187 |
| Hpy8I | GTNNAC | 3 cut(s) | 40, 211, 406 |
| HpyAV | CCTTC | 2 cut(s) | 298, 1084 |
| HpyCH4III | ACNGT | 1 cut(s) | 1184 |
| HpyCH4IV | ACGT | 2 cut(s) | 126, 195 |
| HpyCH4V | TGCA | 1 cut(s) | 1043 |
| HpyF3I | CTNAG | 4 cut(s) | 16, 592, 764, 923 |
| HpySE526I | ACGT | 2 cut(s) | 126, 195 |
| Hsp92I | GRCGYC | 2 cut(s) | 126, 456 |
| Hsp92II | CATG | 3 cut(s) | 61, 901, 1116 |
| HspAI | GCGC | 4 cut(s) | 13, 687, 1001, 1174 |
| KflI | GGGWCCC | 1 cut(s) | 638 |
| Kpn2I | TCCGGA | 1 cut(s) | 513 |
| Ksp22I | TGATCA | 1 cut(s) | 1164 |
| Kzo9I | GATC | 8 cut(s) | 19, 76, 117, 371, 516, 792, 1105, 1164 |
| LguI | GCTCTTC | 1 cut(s) | 1128 |
| LmnI | GCTCC | 4 cut(s) | 528, 590, 614, 919 |
| Lsp1109I | GCAGC | 4 cut(s) | 134, 447, 450, 784 |
| LweI | GCATC | 4 cut(s) | 134, 552, 862, 1149 |
| MaeI | CTAG | 3 cut(s) | 104, 137, 539 |
| MaeII | ACGT | 2 cut(s) | 126, 195 |
| MaeIII | GTNAC | 1 cut(s) | 457 |
| MalI | GATC | 8 cut(s) | 21, 78, 119, 373, 518, 794, 1107, 1166 |
| MboI | GATC | 8 cut(s) | 19, 76, 117, 371, 516, 792, 1105, 1164 |
| MflI | RGATCY | 1 cut(s) | 19 |
| MhlI | GDGCHC | 5 cut(s) | 51, 362, 388, 525, 843 |
| MluCI | AATT | 2 cut(s) | 648, 1013 |
| MlyI | GAGTC | 5 cut(s) | 45, 83, 410, 469, 728 |
| MmeI | TCCRAC | 2 cut(s) | 249, 294 |
| MroI | TCCGGA | 1 cut(s) | 513 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1199 |
| MseI | TTAA | 2 cut(s) | 486, 1034 |
| MspA1I | CMGCKG | 3 cut(s) | 428, 531, 913 |
| MspCI | CTTAAG | 1 cut(s) | 485 |
| MspI | CCGG | 5 cut(s) | 86, 280, 453, 514, 635 |
| MspR9I | CCNGG | 7 cut(s) | 86, 280, 338, 356, 635, 636, 808 |
| MvaI | CCWGG | 3 cut(s) | 338, 356, 808 |
| MvnI | CGCG | 2 cut(s) | 207, 1001 |
| NciI | CCSGG | 4 cut(s) | 86, 280, 635, 636 |
| NdeII | GATC | 8 cut(s) | 19, 76, 117, 371, 516, 792, 1105, 1164 |
| NlaIII | CATG | 3 cut(s) | 61, 901, 1116 |
| NmeAIII | GCCGAG | 2 cut(s) | 324, 782 |
| NmuCI | GTSAC | 1 cut(s) | 457 |
| PceI | AGGCCT | 1 cut(s) | 756 |
| PciSI | GCTCTTC | 1 cut(s) | 1128 |
| PcsI | WCGNNNNNNNCGW | 8 cut(s) | 72, 195, 204, 207, 405, 411, 552, 785 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1199 |
| PfeI | GAWTC | 2 cut(s) | 233, 502 |
| Pfl23II | CGTACG | 1 cut(s) | 1140 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 355 |
| PfoI | TCCNGGA | 2 cut(s) | 84, 278 |
| Ple19I | CGATCG | 1 cut(s) | 79 |
| PleI | GAGTC | 5 cut(s) | 44, 83, 410, 469, 728 |
| PpsI | GAGTC | 5 cut(s) | 44, 83, 410, 469, 728 |
| PpuMI | RGGWCCY | 1 cut(s) | 638 |
| PshAI | GACNNNNGTC | 1 cut(s) | 479 |
| Psp124BI | GAGCTC | 1 cut(s) | 525 |
| Psp5II | RGGWCCY | 1 cut(s) | 638 |
| Psp6I | CCWGG | 3 cut(s) | 336, 354, 806 |
| PspFI | CCCAGC | 1 cut(s) | 527 |
| PspGI | CCWGG | 3 cut(s) | 336, 354, 806 |
| PspLI | CGTACG | 1 cut(s) | 1140 |
| PspOMI | GGGCCC | 2 cut(s) | 358, 384 |
| PspPPI | RGGWCCY | 1 cut(s) | 638 |
| PstNI | CAGNNNCTG | 1 cut(s) | 355 |
| PsuI | RGATCY | 1 cut(s) | 19 |
| PvuI | CGATCG | 1 cut(s) | 79 |
| PvuII | CAGCTG | 1 cut(s) | 913 |
| RsaI | GTAC | 3 cut(s) | 896, 998, 1142 |
| RsaNI | GTAC | 3 cut(s) | 895, 997, 1141 |
| SacI | GAGCTC | 1 cut(s) | 525 |
| SalI | GTCGAC | 2 cut(s) | 209, 404 |
| SapI | GCTCTTC | 1 cut(s) | 1128 |
| SaqAI | TTAA | 2 cut(s) | 486, 1034 |
| Sau3AI | GATC | 8 cut(s) | 19, 76, 117, 371, 516, 792, 1105, 1164 |
| SchI | GAGTC | 5 cut(s) | 45, 83, 410, 469, 728 |
| ScrFI | CCNGG | 7 cut(s) | 86, 280, 338, 356, 635, 636, 808 |
| SduI | GDGCHC | 5 cut(s) | 51, 362, 388, 525, 843 |
| SfaNI | GCATC | 4 cut(s) | 134, 552, 862, 1149 |
| SgrDI | CGTCGACG | 1 cut(s) | 404 |
| SinI | GGWCC | 3 cut(s) | 282, 638, 907 |
| SmaI | CCCGGG | 1 cut(s) | 636 |
| SmlI | CTYRAG | 3 cut(s) | 477, 485, 1187 |
| SmoI | CTYRAG | 3 cut(s) | 477, 485, 1187 |
| Sse9I | AATT | 2 cut(s) | 648, 1013 |
| SseBI | AGGCCT | 1 cut(s) | 756 |
| SspMI | CTAG | 3 cut(s) | 104, 137, 539 |
| SstI | GAGCTC | 1 cut(s) | 525 |
| StuI | AGGCCT | 1 cut(s) | 756 |
| StyD4I | CCNGG | 7 cut(s) | 84, 278, 336, 354, 633, 634, 806 |
| StyI | CCWWGG | 1 cut(s) | 136 |
| TaaI | ACNGT | 1 cut(s) | 1184 |
| TaiI | ACGT | 2 cut(s) | 129, 198 |
| TaqI | TCGA | 9 cut(s) | 75, 189, 210, 405, 444, 519, 546, 956, 1085 |
| TaqII | GACCGA | 2 cut(s) | 613, 884 |
| TasI | AATT | 2 cut(s) | 648, 1013 |
| TatI | WGTACW | 1 cut(s) | 894 |
| TauI | GCSGC | 6 cut(s) | 165, 321, 428, 534, 704, 1154 |
| TfiI | GAWTC | 2 cut(s) | 233, 502 |
| Tru1I | TTAA | 2 cut(s) | 486, 1034 |
| Tru9I | TTAA | 2 cut(s) | 486, 1034 |
| TscAI | CASTG | 1 cut(s) | 1072 |
| TseFI | GTSAC | 1 cut(s) | 457 |
| TseI | GCWGC | 4 cut(s) | 147, 435, 438, 797 |
| Tsp45I | GTSAC | 1 cut(s) | 457 |
| TspDTI | ATGAA | 1 cut(s) | 914 |
| TspGWI | ACGGA | 2 cut(s) | 735, 765 |
| TspMI | CCCGGG | 1 cut(s) | 634 |
| TspRI | CASTG | 1 cut(s) | 1072 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 355 |
| Vha464I | CTTAAG | 1 cut(s) | 485 |
| VpaK11BI | GGWCC | 3 cut(s) | 282, 638, 907 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 805 |
| XapI | RAATTY | 1 cut(s) | 648 |
| XmaI | CCCGGG | 1 cut(s) | 634 |
| XmaJI | CCTAGG | 1 cut(s) | 136 |
| XmiI | GTMKAC | 3 cut(s) | 39, 210, 405 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1199 |
| XspI | CTAG | 3 cut(s) | 104, 137, 539 |
| ZraI | GACGTC | 1 cut(s) | 127 |