Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0010183

Physical Location & Seq

Genomic Coordinates Reverse (-)

3841648 .. 3844136

Gene Structure 2489 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1032000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGTTTCCCAAAGTTCATGCAGGTATGGAAATGGACATGGGCAAGGATTGTGGTAAAACTGGAGGGAATGGAGAGAAGCGTTTGCAGATTTTTGTTGATAGAATGAAACGATTTCCGGCTTTGGTTTGGAGCACGGTGTGGACCGTCGGACGGGATGATCCGAGAAGGGTGATCCATGCTCTGAAAGTTGGCTTGTCTTTGACACTGGTTTCCTTGTTGTATCTGATACAGCCATTGTTTGTTGGGATTGGAGCGAATGCCATTTGGGCTGTCATGACTGTGGTTGTTGTGCTTGAGTTCACTGCAGGGGCTACTTTATGCAAAGGACTGAACCGAGGATTGGGAACATTGTTAGCTGGATCATTGGCATTTTTCATTCAGTACATTGCAACTGAATCCGGTCAGACTTTTCGAGCAGTTTTCATCGGAGCAGCAGTCTTTCTGATTGGAGCTGCAGCTACTTACATGAGGTTTTTCCCTTATATTAGGAAGAACTACGACTACGGAATAGTGATATTTCTCTTGACCTTCAACCTGATAACCGTGTCAAGCTACCGCGTCGAGCATGTCCTGAAGATTGCGCATGATCGATTCTACACCATTGCCATAGGCTGTGGTATCTGCCTACTGATGAGTCTACTGGTATTTCCGAATTGGTCAGGAGAAGAGCTCCATAATTCCTCAGTGTTCAAACTTGAAGGCCTAGCTAGAGCTATTGAAGCTTGTGCGAATGAGTACTTCAGTGAAGAAACAGATGTAGACCAAGACAAATCGACAGAGGATCCCATATATAAAGGTTATAAGGCTGTTTTGGACTCCAAGTCTCAGGATGAAACCATGGCCTTACATGCAAGTTGGGAACCAAGGCACTCAAGACACTGTTACAGATTTCCATGGCAGCGATATGTGAAATTGGGAAACGTTCTTCGCCACTTCGGATACACTGTTGTAGCTCTACATGGATGTATAGGAACCGAAATTCAGACCCCAAGATCTGTTAGGTTACTCTTCAAGGACCCATGCATTCGCCTAGCCGGGGAAGTATCAAAGGCACTGATGGAACTCGCCAATAGCATAAGAAATCGCCGCCATTGCTCTCCCGAAATACTATCCGATCACCTCCACGAAGCTCTGCAAGATCTTAACACAGCCATAAAATCACAACCAAGACTGTTCCTAGGCTCCAACAGCAACCAGGCAACCAACATGCTTGCCCTAGCAGCTGCACACGCAACCCAGCAAAAGCAAGGAGTCTCATTATCAAGCGTGAAAACCGACAGTTCAGCATTGCTCAAATGGAAAACAAAGGGGGCTACTGAGCAGGCAAAGGAGCCGGAGAGGAAGTTTTTGAGGCCACAGCTGAGTAAAATTGCCATAACAAGCCTCGAGTTCTCAGAAGCGCTTCCATTTGCCGCTTTTGCGTCTCTTCTGGTGGAGACGGTGGCAAAGCTGGATCATGTGATCGAGGAAGTTGAAGAGTTGGGGAGGATTGCATGCTTCAAAGAGTACGAGCATGGTGATGAGAATATTGTTGTGACTTGTGAGAGGCCACCGGTGAATCCTGTTCAAAACCATTTGCCTTCCCATGGAGCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0009987 GO:0010118 GO:0012505 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

533

Amino Acids

59.27

Weight (kDa)

8.2

Isoelectric Point (pI)

32.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	47 - 495	1.1e-172	Aluminium activated malate transporter
FUSC_2	PF13515	85 - 211	7.6e-12	Fusaric acid resistance protein-like
FUSC	PF04632	88 - 246	5e-09	Fusaric acid resistance protein family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17970
fragaria_vesca	FvH4_5g21690
malus_domestica	MD06G1032000.v1.1 MD16G1276700.v1.1
prunus_persica	Prupe.5G040200_v2.0.a1
pyrus_communis	pycom06g02650
rosa_chinensis	RchiOBHm_Chr7g0209201 RchiOBHm_Chr7g0241571
rosa_laevigata	RLG00000000564 RLG00000003158
rosa_multiflora	Rmu_sc0002268.1_g000019
rosa_roxburghii	Rroxscaffold_3G00218910 Rroxscaffold_3G00249650
rosa_rugosa	Rorug07G0110100 Rorug07G0345300
rosa_samantha	Rh7AG244200 Rh7CG259700 Rh7DG251000 Rh7DG484800
rosa_wichuraiana	Rw7G020710 Rw7G042210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	801
Acc16I	TGCGCA	1 cut(s)	582
Acc36I	ACCTGC	1 cut(s)	11
AccI	GTMKAC	2 cut(s)	637, 759
AccII	CGCG	1 cut(s)	558
AciI	CCGC	3 cut(s)	556, 1087, 1413
AclI	AACGTT	1 cut(s)	921
AclWI	GGATC	6 cut(s)	152, 166, 367, 776, 789, 1461
AcsI	RAATTY	1 cut(s)	978
AcuI	CTGAAG	2 cut(s)	593, 724
AdeI	CACNNNGTG	1 cut(s)	138
AfaI	GTAC	3 cut(s)	383, 737, 1508
AfeI	AGCGCT	1 cut(s)	1401
AfiI	CCNNNNNNNGG	4 cut(s)	150, 340, 1036, 1586
AgeI	ACCGGT	1 cut(s)	1552
AgsI	TTSAA	8 cut(s)	532, 691, 698, 719, 1012, 1475, 1501, 1568
AhdI	GACNNNNNGTC	1 cut(s)	820
AjnI	CCWGG	1 cut(s)	1194
AjuI	GAANNNNNNNTTGG	2 cut(s)	323, 355
Alw21I	GWGCWC	2 cut(s)	134, 672
Alw26I	GTCTC	4 cut(s)	828, 1258, 1428, 1430
AlwI	GGATC	6 cut(s)	152, 166, 367, 776, 789, 1461
Ama87I	CYCGRG	1 cut(s)	1385
Aor51HI	AGCGCT	1 cut(s)	1401
AoxI	GGCC	4 cut(s)	700, 840, 1352, 1547
ApeKI	GCWGC	6 cut(s)	431, 452, 455, 898, 1220, 1223
ApoI	RAATTY	1 cut(s)	978
AsiGI	ACCGGT	1 cut(s)	1552
Asp700I	GAANNNNTTC	1 cut(s)	1401
AspA2I	CCTAGG	1 cut(s)	1177
AspLEI	GCGC	2 cut(s)	583, 1402
AspS9I	GGNCC	2 cut(s)	141, 1015
AsuC2I	CCSGG	1 cut(s)	1036
AsuHPI	GGTGA	4 cut(s)	181, 1109, 1529, 1567
AvaI	CYCGRG	1 cut(s)	1385
AvaII	GGWCC	2 cut(s)	141, 1015
AvrII	CCTAGG	1 cut(s)	1177
BamHI	GGATCC	1 cut(s)	781
BanII	GRGCYC	1 cut(s)	672
Bbv12I	GWGCWC	2 cut(s)	134, 672
BbvI	GCAGC	6 cut(s)	439, 443, 467, 910, 1210, 1232
BccI	CCATC	1 cut(s)	1051
BciT130I	CCWGG	1 cut(s)	1196
BciVI	GTATCC	1 cut(s)	932
BcnI	CCSGG	1 cut(s)	1036
BcoDI	GTCTC	4 cut(s)	828, 1258, 1428, 1430
BfaI	CTAG	5 cut(s)	704, 708, 1031, 1178, 1217
BfmI	CTRYAG	2 cut(s)	303, 453
BfoI	RGCGCY	1 cut(s)	1403
BfuAI	ACCTGC	1 cut(s)	11
BfuI	GTATCC	1 cut(s)	932
BglI	GCCNNNNNGGC	1 cut(s)	266
BglII	AGATCT	2 cut(s)	992, 1138
BisI	GCNGC	8 cut(s)	432, 453, 456, 899, 1087, 1221, 1224, 1413
BlnI	CCTAGG	1 cut(s)	1177
BlsI	GCNGC	8 cut(s)	433, 454, 457, 900, 1088, 1222, 1225, 1414
BmcAI	AGTACT	1 cut(s)	737
Bme1390I	CCNGG	2 cut(s)	1036, 1196
Bme18I	GGWCC	2 cut(s)	141, 1015
BmeRI	GACNNNNNGTC	1 cut(s)	820
BmeT110I	CYCGRG	1 cut(s)	1385
BmgT120I	GGNCC	2 cut(s)	141, 1015
BmiI	GGNNCC	6 cut(s)	783, 861, 973, 1017, 1183, 1332
BmrFI	CCNGG	2 cut(s)	1036, 1196
BplI	GAGNNNNNCTC	2 cut(s)	654, 686
BpmI	CTGGAG	1 cut(s)	81
BpuEI	CTTGAG	2 cut(s)	314, 856
BpuMI	CCSGG	1 cut(s)	1036
Bsa29I	ATCGAT	1 cut(s)	589
BsaJI	CCNNGG	7 cut(s)	334, 837, 863, 893, 1035, 1177, 1585
BsaWI	WCCGGW	2 cut(s)	398, 1552
BsaXI	ACNNNNNCTCC	4 cut(s)	420, 450, 1328, 1358
Bsc4I	CCNNNNNNNGG	4 cut(s)	150, 340, 1036, 1586
Bse118I	RCCGGY	1 cut(s)	1552
Bse1I	ACTGG	3 cut(s)	64, 210, 645
Bse3DI	GCAATG	4 cut(s)	384, 600, 1090, 1286
BseBI	CCWGG	1 cut(s)	1196
BseCI	ATCGAT	1 cut(s)	589
BseDI	CCNNGG	7 cut(s)	334, 837, 863, 893, 1035, 1177, 1585
BseGI	GGATG	3 cut(s)	160, 835, 968
BseLI	CCNNNNNNNGG	4 cut(s)	150, 340, 1036, 1586
BseMI	GCAATG	4 cut(s)	384, 600, 1090, 1286
BseMII	CTCAG	5 cut(s)	696, 839, 1308, 1352, 1407
BseNI	ACTGG	3 cut(s)	64, 210, 645
BseXI	GCAGC	6 cut(s)	439, 443, 467, 910, 1210, 1232
BseYI	CCCAGC	1 cut(s)	1236
BsgI	GTGCAG	1 cut(s)	1209
Bsh1236I	CGCG	1 cut(s)	558
BshFI	GGCC	4 cut(s)	702, 842, 1354, 1549
BshTI	ACCGGT	1 cut(s)	1552
BshVI	ATCGAT	1 cut(s)	589
BsiHKAI	GWGCWC	2 cut(s)	134, 672
BsiHKCI	CYCGRG	1 cut(s)	1385
BsiSI	CCGG	5 cut(s)	116, 399, 1035, 1334, 1553
BslI	CCNNNNNNNGG	4 cut(s)	150, 340, 1036, 1586
BsmAI	GTCTC	4 cut(s)	828, 1258, 1428, 1430
BsmBI	CGTCTC	2 cut(s)	1428, 1430
BsmI	GAATGC	2 cut(s)	262, 1023
BsnI	GGCC	4 cut(s)	702, 842, 1354, 1549
BsoBI	CYCGRG	1 cut(s)	1385
Bsp1286I	GDGCHC	2 cut(s)	134, 672
Bsp19I	CCATGG	3 cut(s)	837, 893, 1585
BspACI	CCGC	3 cut(s)	556, 1087, 1413
BspANI	GGCC	4 cut(s)	702, 842, 1354, 1549
BspCNI	CTCAG	5 cut(s)	695, 838, 1309, 1353, 1406
BspDI	ATCGAT	1 cut(s)	589
BspFNI	CGCG	1 cut(s)	558
BspHI	TCATGA	1 cut(s)	273
BspLI	GGNNCC	6 cut(s)	783, 861, 973, 1017, 1183, 1332
BspMAI	CTGCAG	2 cut(s)	307, 457
BspMI	ACCTGC	1 cut(s)	11
BspPI	GGATC	6 cut(s)	152, 166, 367, 776, 789, 1461
BspQI	GCTCTTC	1 cut(s)	660
BsrDI	GCAATG	4 cut(s)	384, 600, 1090, 1286
BsrFI	RCCGGY	1 cut(s)	1552
BsrI	ACTGG	3 cut(s)	64, 210, 645
BssAI	RCCGGY	1 cut(s)	1552
BssECI	CCNNGG	7 cut(s)	334, 837, 863, 893, 1035, 1177, 1585
BssT1I	CCWWGG	5 cut(s)	837, 863, 893, 1177, 1585
Bst2UI	CCWGG	1 cut(s)	1196
Bst4CI	ACNGT	9 cut(s)	136, 145, 280, 544, 881, 946, 1173, 1280, 1441
Bst6I	CTCTTC	4 cut(s)	660, 1013, 1431, 1470
BstC8I	GCNNGC	3 cut(s)	1212, 1323, 1495
BstDEI	CTNAG	5 cut(s)	682, 825, 1317, 1361, 1393
BstDSI	CCRYGG	3 cut(s)	837, 893, 1585
BstF5I	GGATG	3 cut(s)	160, 835, 968
BstFNI	CGCG	1 cut(s)	558
BstH2I	RGCGCY	1 cut(s)	1403
BstHHI	GCGC	2 cut(s)	583, 1402
BstMAI	GTCTC	4 cut(s)	828, 1258, 1428, 1430
BstMWI	GCNNNNNNNGC	8 cut(s)	266, 719, 848, 1092, 1188, 1220, 1229, 1418
BstNI	CCWGG	1 cut(s)	1196
BstNSI	RCATGY	4 cut(s)	569, 851, 1210, 1497
BstSCI	CCNGG	2 cut(s)	1034, 1194
BstSFI	CTRYAG	2 cut(s)	303, 453
BstUI	CGCG	1 cut(s)	558
BstV1I	GCAGC	6 cut(s)	439, 443, 467, 910, 1210, 1232
BstX2I	RGATCY	3 cut(s)	781, 992, 1138
BstYI	RGATCY	3 cut(s)	781, 992, 1138
Bsu15I	ATCGAT	1 cut(s)	589
BsuI	GTATCC	1 cut(s)	932
BsuRI	GGCC	4 cut(s)	702, 842, 1354, 1549
BsuTUI	ATCGAT	1 cut(s)	589
BtgI	CCRYGG	3 cut(s)	837, 893, 1585
BtsCI	GGATG	3 cut(s)	160, 835, 968
BtsI	GCAGTG	1 cut(s)	300
BtsIMutI	CAGTG	7 cut(s)	203, 300, 690, 748, 877, 942, 1052
BveI	ACCTGC	1 cut(s)	11
Cac8I	GCNNGC	3 cut(s)	1212, 1323, 1495
CciI	TCATGA	1 cut(s)	273
CfoI	GCGC	2 cut(s)	583, 1402
Cfr10I	RCCGGY	1 cut(s)	1552
Cfr13I	GGNCC	2 cut(s)	141, 1015
ClaI	ATCGAT	1 cut(s)	589
CseI	GACGC	2 cut(s)	547, 1410
Csp6I	GTAC	3 cut(s)	382, 736, 1507
CspAI	ACCGGT	1 cut(s)	1552
CspCI	CAANNNNNGTGG	2 cut(s)	31, 66
CviQI	GTAC	3 cut(s)	382, 736, 1507
DdeI	CTNAG	5 cut(s)	682, 825, 1317, 1361, 1393
DraIII	CACNNNGTG	1 cut(s)	138
DriI	GACNNNNNGTC	1 cut(s)	820
Eam1104I	CTCTTC	4 cut(s)	660, 1013, 1431, 1470
Eam1105I	GACNNNNNGTC	1 cut(s)	820
EarI	CTCTTC	4 cut(s)	660, 1013, 1431, 1470
Ecl136II	GAGCTC	1 cut(s)	670
Eco130I	CCWWGG	5 cut(s)	837, 863, 893, 1177, 1585
Eco147I	AGGCCT	1 cut(s)	702
Eco24I	GRGCYC	1 cut(s)	672
Eco47I	GGWCC	2 cut(s)	141, 1015
Eco47III	AGCGCT	1 cut(s)	1401
Eco53kI	GAGCTC	1 cut(s)	670
Eco57I	CTGAAG	2 cut(s)	593, 724
Eco88I	CYCGRG	1 cut(s)	1385
EcoICRI	GAGCTC	1 cut(s)	670
EcoO109I	RGGNCCY	1 cut(s)	1015
EcoRII	CCWGG	1 cut(s)	1194
EcoT14I	CCWWGG	5 cut(s)	837, 863, 893, 1177, 1585
EcoT22I	ATGCAT	1 cut(s)	1025
EcoT38I	GRGCYC	1 cut(s)	672
ErhI	CCWWGG	5 cut(s)	837, 863, 893, 1177, 1585
Esp3I	CGTCTC	2 cut(s)	1428, 1430
FblI	GTMKAC	2 cut(s)	637, 759
Fnu4HI	GCNGC	8 cut(s)	432, 453, 456, 899, 1087, 1221, 1224, 1413
FokI	GGATG	3 cut(s)	167, 842, 975
FriOI	GRGCYC	1 cut(s)	672
Fsp4HI	GCNGC	8 cut(s)	432, 453, 456, 899, 1087, 1221, 1224, 1413
FspBI	CTAG	5 cut(s)	704, 708, 1031, 1178, 1217
FspI	TGCGCA	1 cut(s)	582
GlaI	GCGC	2 cut(s)	582, 1401
GluI	GCNGC	8 cut(s)	432, 453, 456, 899, 1087, 1221, 1224, 1413
GsaI	CCCAGC	1 cut(s)	1240
GsuI	CTGGAG	1 cut(s)	81
HaeII	RGCGCY	1 cut(s)	1403
HaeIII	GGCC	4 cut(s)	702, 842, 1354, 1549
HapII	CCGG	5 cut(s)	116, 399, 1035, 1334, 1553
HgaI	GACGC	2 cut(s)	547, 1410
HhaI	GCGC	2 cut(s)	583, 1402
Hin6I	GCGC	2 cut(s)	581, 1400
HinP1I	GCGC	2 cut(s)	581, 1400
HindIII	AAGCTT	1 cut(s)	720
HinfI	GANTC	6 cut(s)	395, 591, 634, 815, 1251, 1558
HpaII	CCGG	5 cut(s)	116, 399, 1035, 1334, 1553
HphI	GGTGA	4 cut(s)	181, 1109, 1529, 1567
Hpy166II	GTNNAC	4 cut(s)	141, 300, 638, 760
Hpy188III	TCNNGA	7 cut(s)	274, 523, 571, 660, 827, 873, 1100
Hpy8I	GTNNAC	4 cut(s)	141, 300, 638, 760
Hpy99I	CGWCG	2 cut(s)	149, 563
HpyAV	CCTTC	4 cut(s)	159, 538, 692, 1590
HpyCH4III	ACNGT	9 cut(s)	136, 145, 280, 544, 881, 946, 1173, 1280, 1441
HpyCH4IV	ACGT	1 cut(s)	921
HpyF10VI	GCNNNNNNNGC	8 cut(s)	266, 719, 848, 1092, 1188, 1220, 1229, 1418
HpyF3I	CTNAG	5 cut(s)	682, 825, 1317, 1361, 1393
HpySE526I	ACGT	1 cut(s)	921
HspAI	GCGC	2 cut(s)	581, 1400
LguI	GCTCTTC	1 cut(s)	660
LmnI	GCTCC	8 cut(s)	129, 251, 428, 449, 675, 1187, 1330, 1589
Lsp1109I	GCAGC	6 cut(s)	439, 443, 467, 910, 1210, 1232
MaeI	CTAG	5 cut(s)	704, 708, 1031, 1178, 1217
MaeII	ACGT	1 cut(s)	921
MaeIII	GTNAC	3 cut(s)	881, 1002, 1534
MboII	GAAGA	8 cut(s)	502, 586, 677, 758, 917, 1000, 1418, 1487
MflI	RGATCY	3 cut(s)	781, 992, 1138
MhlI	GDGCHC	2 cut(s)	134, 672
MluCI	AATT	5 cut(s)	652, 676, 911, 978, 1368
MlyI	GAGTC	3 cut(s)	643, 809, 1260
MmeI	TCCRAC	2 cut(s)	127, 1209
Mph1103I	ATGCAT	1 cut(s)	1025
MroXI	GAANNNNTTC	1 cut(s)	1401
MseI	TTAA	2 cut(s)	1143, 1597
MslI	CAYNNNNRTG	2 cut(s)	278, 1518
MspA1I	CMGCKG	2 cut(s)	1223, 1360
MspI	CCGG	5 cut(s)	116, 399, 1035, 1334, 1553
MspR9I	CCNGG	2 cut(s)	1036, 1196
Mva1269I	GAATGC	2 cut(s)	262, 1023
MvaI	CCWGG	1 cut(s)	1196
MvnI	CGCG	1 cut(s)	558
MwoI	GCNNNNNNNGC	8 cut(s)	266, 719, 848, 1092, 1188, 1220, 1229, 1418
NciI	CCSGG	1 cut(s)	1036
NcoI	CCATGG	3 cut(s)	837, 893, 1585
NlaIV	GGNNCC	6 cut(s)	783, 861, 973, 1017, 1183, 1332
NmuCI	GTSAC	1 cut(s)	1534
NsbI	TGCGCA	1 cut(s)	582
NsiI	ATGCAT	1 cut(s)	1025
NspI	RCATGY	4 cut(s)	569, 851, 1210, 1497
PaeI	GCATGC	1 cut(s)	1497
PaeR7I	CTCGAG	1 cut(s)	1385
PagI	TCATGA	1 cut(s)	273
PceI	AGGCCT	1 cut(s)	702
PciSI	GCTCTTC	1 cut(s)	660
PctI	GAATGC	2 cut(s)	262, 1023
PdmI	GAANNNNTTC	1 cut(s)	1401
PfeI	GAWTC	3 cut(s)	395, 591, 1558
PinAI	ACCGGT	1 cut(s)	1552
PkrI	GCNGC	8 cut(s)	433, 454, 457, 900, 1088, 1222, 1225, 1414
PleI	GAGTC	3 cut(s)	642, 809, 1259
PpsI	GAGTC	3 cut(s)	642, 809, 1259
PpuMI	RGGWCCY	1 cut(s)	1015
PsiI	TTATAA	1 cut(s)	801
Psp124BI	GAGCTC	1 cut(s)	672
Psp1406I	AACGTT	1 cut(s)	921
Psp5II	RGGWCCY	1 cut(s)	1015
Psp6I	CCWGG	1 cut(s)	1194
PspFI	CCCAGC	1 cut(s)	1236
PspGI	CCWGG	1 cut(s)	1194
PspN4I	GGNNCC	6 cut(s)	783, 861, 973, 1017, 1183, 1332
PspPI	GGNCC	2 cut(s)	141, 1015
PspPPI	RGGWCCY	1 cut(s)	1015
PspXI	VCTCGAGB	1 cut(s)	1385
PsrI	GAACNNNNNNTAC	2 cut(s)	485, 517
PstI	CTGCAG	2 cut(s)	307, 457
PsuI	RGATCY	3 cut(s)	781, 992, 1138
PvuII	CAGCTG	2 cut(s)	1223, 1360
RsaI	GTAC	3 cut(s)	383, 737, 1508
RsaNI	GTAC	3 cut(s)	382, 736, 1507
RseI	CAYNNNNRTG	2 cut(s)	278, 1518
SacI	GAGCTC	1 cut(s)	672
SapI	GCTCTTC	1 cut(s)	660
SaqAI	TTAA	2 cut(s)	1143, 1597
SatI	GCNGC	8 cut(s)	432, 453, 456, 899, 1087, 1221, 1224, 1413
Sau96I	GGNCC	2 cut(s)	141, 1015
ScaI	AGTACT	1 cut(s)	737
SchI	GAGTC	3 cut(s)	643, 809, 1260
ScrFI	CCNGG	2 cut(s)	1036, 1196
SduI	GDGCHC	2 cut(s)	134, 672
SfcI	CTRYAG	2 cut(s)	303, 453
Sfr274I	CTCGAG	1 cut(s)	1385
SgrAI	CRCCGGYG	1 cut(s)	1552
SinI	GGWCC	2 cut(s)	141, 1015
SlaI	CTCGAG	1 cut(s)	1385
SmiMI	CAYNNNNRTG	2 cut(s)	278, 1518
SmlI	CTYRAG	3 cut(s)	293, 871, 1385
SmoI	CTYRAG	3 cut(s)	293, 871, 1385
SphI	GCATGC	1 cut(s)	1497
Sse9I	AATT	5 cut(s)	652, 676, 911, 978, 1368
SseBI	AGGCCT	1 cut(s)	702
SsiI	CCGC	3 cut(s)	556, 1087, 1413
SspI	AATATT	1 cut(s)	1528
SspMI	CTAG	5 cut(s)	704, 708, 1031, 1178, 1217
SstI	GAGCTC	1 cut(s)	672
StuI	AGGCCT	1 cut(s)	702
StyD4I	CCNGG	2 cut(s)	1034, 1194
StyI	CCWWGG	5 cut(s)	837, 863, 893, 1177, 1585
TaaI	ACNGT	9 cut(s)	136, 145, 280, 544, 881, 946, 1173, 1280, 1441
TaiI	ACGT	1 cut(s)	924
TaqI	TCGA	6 cut(s)	412, 561, 589, 773, 1386, 1464
TasI	AATT	5 cut(s)	652, 676, 911, 978, 1368
TatI	WGTACW	2 cut(s)	381, 735
TauI	GCSGC	2 cut(s)	1089, 1415
TfiI	GAWTC	3 cut(s)	395, 591, 1558
Tru1I	TTAA	2 cut(s)	1143, 1597
Tru9I	TTAA	2 cut(s)	1143, 1597
TscAI	CASTG	7 cut(s)	210, 307, 690, 748, 884, 949, 1059
TseFI	GTSAC	1 cut(s)	1534
TseI	GCWGC	6 cut(s)	431, 452, 455, 898, 1220, 1223
Tsp45I	GTSAC	1 cut(s)	1534
TspDTI	ATGAA	5 cut(s)	5, 119, 364, 412, 846
TspGWI	ACGGA	1 cut(s)	519
TspRI	CASTG	7 cut(s)	210, 307, 690, 748, 884, 949, 1059
VpaK11BI	GGWCC	2 cut(s)	141, 1015
XapI	RAATTY	1 cut(s)	978
XceI	RCATGY	4 cut(s)	569, 851, 1210, 1497
XhoI	CTCGAG	1 cut(s)	1385
XmaJI	CCTAGG	1 cut(s)	1177
XmiI	GTMKAC	2 cut(s)	637, 759
XmnI	GAANNNNTTC	1 cut(s)	1401
XspI	CTAG	5 cut(s)	704, 708, 1031, 1178, 1217
ZrmI	AGTACT	1 cut(s)	737
Zsp2I	ATGCAT	1 cut(s)	1025

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.