Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0010183

Physical Location & Seq

Genomic Coordinates Forward (+)

37456093 .. 37458511

Gene Structure 2419 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1276700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGTTTCCCAAAGTTCATGCAGGTATGGAAATGGACATGGTCAAGGATTGTGGTAAAAATGAAGGGAATGCATTGAAGCGTTTGCAGATTTTTGCCGAAAGAATGAAACGATTTCCGGGTTTGGTTTGGAGCACGGTGTGGACCGTCGCACGGGATGACCCGAGAAGGGTGATCCATGCTTTGAAAGTTGGCTTGTCTTTGACACTGGTTTCCTTGTTGTATCTGATACAGCCGCTGTTTGTTGGGATTGGACAGAATGCCATTTGGGCTGTCATGACTGTGGTTGTTGTGCTTGAGTTCACTGCAGGGGCAACTTTGTGCAAGGGACTGAACCGTGGATTGGGGACATTGTTAGCTGGATCATTGGCCTTTTTCATAGAGTATATTGCAACTGAATCCGGTCGGACTTTCCGAGCAGTTTTCATCGGAGCGGCAGTCTTTCTGATTGGAGCTGCAGCCACATACATGAGGTTTTTTCCTTATATTAGGAAGAACTATGACTATGGAATCGTGATATTTCTCTTGACCTTCAACCTAATAACCGTGTCAAGCTACCGCGTTGAAAATGTCTTGAAGATTGCGCATGAGAGATTCTACACCATTGCCATAGGCTGTGGTATCTGCCTAATGATGAGTCTACTGGTATTTCCTAATTGGTCAGGAGAAGAGCTCCATAATTCCACAGTGTTCAAGCTTGAAGGCCTAGCTAGAGCTATTGAAGCTTGTGTGAATGAGTACTTTAGGGAAGAAACAGAACTAAACCAAGACAAATCAACAGAGGATCCCATATATGAAGGTTATAAGGCTGTTTTGGACTCCAAGTCTCTGGATGAAACCATGGCCTTACATGCAAGTTGGGAACCAAGGCATTCAAGACACTGTCACAGATTTCCATGGCAGCGATACGTGAAATTGGGAAACGTTCTTCGACATTTTGGATACACCATTGTAGCTCTACATGGATGTCTAGGAACTGAAATTCAGACCCCAAGATCTGTTAGGTTACTCTTCAAGGACCCATGCATTCGCCTTGCAGGAGAAGTATCGAAAGCACTAATGGAACTTTCCAACAGCATGAGAAATCGCCGCCATTGCTCTCCCGAAATACTATCCGATCACCTCCATGAAGCTCTCCAAGACCTAAACACAGCCATAAAATCACAACCAAGACTGTTCCTAGGCTCCAACAGCAACCAGGCTACCAACATGCTTGCCCTAGCAGCGGCACACGCCACACAACAAAAGCAAGGAGTCTCGTTATCAAGCGTGAAAACCGACAGTTCAGCGCTACTCGAGTGGAAAACAAAGAGGGCTAATGAGCAGGCAAAGGAGCCGGAGAGAAAGTTCTTGAGGCCACAGCTGAGTAAAATTGCCATCACCAGCCTCGAGTTCTCGGAAGCGCTTCCGTTTGCCGCTTTTGCATCTCTGCTGGTGGAGACGGTGGCAAAGTTGGATCATGTGATCGAGGAAGTTGAAGAGTTGGGGAGGATTGCATGCTTCAAAGAGTACGAGCATGGGGATGAGAATATTGTTGTAACTTATGAGAGGCCACCGGTGAATCCTATCCAAAACCATTTGCCTTCCCATGGGGCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0009987 GO:0010118 GO:0012505 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

533

Amino Acids

59.81

Weight (kDa)

7.99

Isoelectric Point (pI)

34.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	47 - 495	1e-173	Aluminium activated malate transporter
FUSC_2	PF13515	83 - 210	3.1e-12	Fusaric acid resistance protein-like
FUSC	PF04632	86 - 246	1e-08	Fusaric acid resistance protein family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17970
fragaria_vesca	FvH4_5g21690
malus_domestica	MD06G1032000.v1.1 MD16G1276700.v1.1
prunus_persica	Prupe.5G040200_v2.0.a1
pyrus_communis	pycom06g02650
rosa_chinensis	RchiOBHm_Chr7g0209201 RchiOBHm_Chr7g0241571
rosa_laevigata	RLG00000000564 RLG00000003158
rosa_multiflora	Rmu_sc0002268.1_g000019
rosa_roxburghii	Rroxscaffold_3G00218910 Rroxscaffold_3G00249650
rosa_rugosa	Rorug07G0110100 Rorug07G0345300
rosa_samantha	Rh7AG244200 Rh7CG259700 Rh7DG251000 Rh7DG484800
rosa_wichuraiana	Rw7G020710 Rw7G042210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	801
Acc16I	TGCGCA	1 cut(s)	582
Acc36I	ACCTGC	1 cut(s)	11
AccBSI	CCGCTC	1 cut(s)	431
AccI	GTMKAC	1 cut(s)	637
AccII	CGCG	1 cut(s)	558
AciI	CCGC	6 cut(s)	233, 431, 556, 1087, 1223, 1413
AclI	AACGTT	1 cut(s)	921
AclWI	GGATC	5 cut(s)	166, 367, 776, 789, 1461
AcsI	RAATTY	1 cut(s)	978
AdeI	CACNNNGTG	1 cut(s)	138
AfaI	GTAC	2 cut(s)	737, 1508
AfeI	AGCGCT	2 cut(s)	1287, 1401
AfiI	CCNNNNNNNGG	5 cut(s)	150, 166, 340, 1222, 1586
AgeI	ACCGGT	1 cut(s)	1552
AhdI	GACNNNNNGTC	1 cut(s)	820
AjnI	CCWGG	1 cut(s)	1194
AjuI	GAANNNNNNNTTGG	2 cut(s)	323, 355
AloI	GAACNNNNNNTCC	2 cut(s)	1328, 1360
Alw21I	GWGCWC	2 cut(s)	134, 672
Alw26I	GTCTC	3 cut(s)	828, 1258, 1430
AlwI	GGATC	5 cut(s)	166, 367, 776, 789, 1461
AlwNI	CAGNNNCTG	1 cut(s)	235
Ama87I	CYCGRG	3 cut(s)	160, 1292, 1385
Aor51HI	AGCGCT	2 cut(s)	1287, 1401
AoxI	GGCC	5 cut(s)	366, 700, 840, 1352, 1547
ApeKI	GCWGC	4 cut(s)	452, 455, 898, 1220
ApoI	RAATTY	1 cut(s)	978
AsiGI	ACCGGT	1 cut(s)	1552
Asp700I	GAANNNNTTC	1 cut(s)	1401
AspA2I	CCTAGG	1 cut(s)	1177
AspLEI	GCGC	3 cut(s)	583, 1288, 1402
AspS9I	GGNCC	2 cut(s)	141, 1015
AsuC2I	CCSGG	1 cut(s)	117
AsuHPI	GGTGA	4 cut(s)	181, 1109, 1369, 1567
AvaI	CYCGRG	3 cut(s)	160, 1292, 1385
AvaII	GGWCC	2 cut(s)	141, 1015
AvrII	CCTAGG	1 cut(s)	1177
BamHI	GGATCC	1 cut(s)	781
BanII	GRGCYC	1 cut(s)	672
Bbv12I	GWGCWC	2 cut(s)	134, 672
BbvI	GCAGC	4 cut(s)	439, 467, 910, 1232
BccI	CCATC	1 cut(s)	1382
BciT130I	CCWGG	1 cut(s)	1196
BciVI	GTATCC	1 cut(s)	932
BcnI	CCSGG	1 cut(s)	117
BcoDI	GTCTC	3 cut(s)	828, 1258, 1430
BfaI	CTAG	5 cut(s)	704, 708, 968, 1178, 1217
BfmI	CTRYAG	2 cut(s)	303, 453
BfoI	RGCGCY	2 cut(s)	1289, 1403
BfuAI	ACCTGC	1 cut(s)	11
BfuI	GTATCC	1 cut(s)	932
BglI	GCCNNNNNGGC	1 cut(s)	266
BglII	AGATCT	1 cut(s)	992
BisI	GCNGC	9 cut(s)	233, 432, 453, 456, 899, 1087, 1221, 1224, 1413
BlnI	CCTAGG	1 cut(s)	1177
BlsI	GCNGC	9 cut(s)	234, 433, 454, 457, 900, 1088, 1222, 1225, 1414
BmcAI	AGTACT	1 cut(s)	737
Bme1390I	CCNGG	2 cut(s)	117, 1196
Bme18I	GGWCC	2 cut(s)	141, 1015
BmeRI	GACNNNNNGTC	1 cut(s)	820
BmeT110I	CYCGRG	3 cut(s)	160, 1292, 1385
BmgT120I	GGNCC	2 cut(s)	141, 1015
BmiI	GGNNCC	5 cut(s)	783, 861, 1017, 1183, 1332
BmrFI	CCNGG	2 cut(s)	117, 1196
BmsI	GCATC	1 cut(s)	1430
BplI	GAGNNNNNCTC	2 cut(s)	654, 686
BpuEI	CTTGAG	2 cut(s)	314, 1369
BpuMI	CCSGG	1 cut(s)	117
BsaAI	YACGTR	1 cut(s)	907
BsaJI	CCNNGG	6 cut(s)	334, 837, 863, 893, 1177, 1585
BsaWI	WCCGGW	2 cut(s)	398, 1552
BsaXI	ACNNNNNCTCC	4 cut(s)	420, 450, 1328, 1358
Bsc4I	CCNNNNNNNGG	5 cut(s)	150, 166, 340, 1222, 1586
Bse118I	RCCGGY	1 cut(s)	1552
Bse1I	ACTGG	2 cut(s)	210, 645
Bse3DI	GCAATG	2 cut(s)	600, 1090
BseBI	CCWGG	1 cut(s)	1196
BseDI	CCNNGG	6 cut(s)	334, 837, 863, 893, 1177, 1585
BseGI	GGATG	4 cut(s)	160, 835, 968, 1525
BseLI	CCNNNNNNNGG	5 cut(s)	150, 166, 340, 1222, 1586
BseMI	GCAATG	2 cut(s)	600, 1090
BseMII	CTCAG	1 cut(s)	1352
BseNI	ACTGG	2 cut(s)	210, 645
BseXI	GCAGC	4 cut(s)	439, 467, 910, 1232
Bsh1236I	CGCG	1 cut(s)	558
Bsh1285I	CGRYCG	1 cut(s)	403
BshFI	GGCC	5 cut(s)	368, 702, 842, 1354, 1549
BshTI	ACCGGT	1 cut(s)	1552
BsiEI	CGRYCG	1 cut(s)	403
BsiHKAI	GWGCWC	2 cut(s)	134, 672
BsiHKCI	CYCGRG	3 cut(s)	160, 1292, 1385
BsiSI	CCGG	4 cut(s)	116, 399, 1334, 1553
BslFI	GGGAC	2 cut(s)	339, 358
BslI	CCNNNNNNNGG	5 cut(s)	150, 166, 340, 1222, 1586
BsmAI	GTCTC	3 cut(s)	828, 1258, 1430
BsmBI	CGTCTC	1 cut(s)	1430
BsmFI	GGGAC	2 cut(s)	339, 358
BsmI	GAATGC	4 cut(s)	73, 262, 868, 1023
BsnI	GGCC	5 cut(s)	368, 702, 842, 1354, 1549
BsoBI	CYCGRG	3 cut(s)	160, 1292, 1385
Bsp1286I	GDGCHC	2 cut(s)	134, 672
Bsp143I	GATC	7 cut(s)	171, 359, 781, 992, 1114, 1453, 1461
Bsp19I	CCATGG	3 cut(s)	837, 893, 1585
BspACI	CCGC	6 cut(s)	233, 431, 556, 1087, 1223, 1413
BspANI	GGCC	5 cut(s)	368, 702, 842, 1354, 1549
BspCNI	CTCAG	1 cut(s)	1353
BspFNI	CGCG	1 cut(s)	558
BspHI	TCATGA	1 cut(s)	273
BspLI	GGNNCC	5 cut(s)	783, 861, 1017, 1183, 1332
BspMAI	CTGCAG	2 cut(s)	307, 457
BspMI	ACCTGC	1 cut(s)	11
BspPI	GGATC	5 cut(s)	166, 367, 776, 789, 1461
BspQI	GCTCTTC	1 cut(s)	660
BsrBI	CCGCTC	1 cut(s)	431
BsrDI	GCAATG	2 cut(s)	600, 1090
BsrFI	RCCGGY	1 cut(s)	1552
BsrI	ACTGG	2 cut(s)	210, 645
BssAI	RCCGGY	1 cut(s)	1552
BssECI	CCNNGG	6 cut(s)	334, 837, 863, 893, 1177, 1585
BssMI	GATC	7 cut(s)	171, 359, 781, 992, 1114, 1453, 1461
BssT1I	CCWWGG	5 cut(s)	837, 863, 893, 1177, 1585
Bst2UI	CCWGG	1 cut(s)	1196
Bst6I	CTCTTC	3 cut(s)	660, 1013, 1470
BstBAI	YACGTR	1 cut(s)	907
BstC8I	GCNNGC	3 cut(s)	1212, 1323, 1495
BstDEI	CTNAG	1 cut(s)	1361
BstDSI	CCRYGG	4 cut(s)	334, 837, 893, 1585
BstF5I	GGATG	4 cut(s)	160, 835, 968, 1525
BstFNI	CGCG	1 cut(s)	558
BstH2I	RGCGCY	2 cut(s)	1289, 1403
BstHHI	GCGC	3 cut(s)	583, 1288, 1402
BstKTI	GATC	7 cut(s)	174, 362, 784, 995, 1117, 1456, 1464
BstMAI	GTCTC	3 cut(s)	828, 1258, 1430
BstMBI	GATC	7 cut(s)	171, 359, 781, 992, 1114, 1453, 1461
BstMCI	CGRYCG	1 cut(s)	403
BstMWI	GCNNNNNNNGC	8 cut(s)	266, 719, 848, 1092, 1188, 1220, 1229, 1418
BstNI	CCWGG	1 cut(s)	1196
BstNSI	RCATGY	3 cut(s)	851, 1210, 1497
BstSCI	CCNGG	2 cut(s)	115, 1194
BstSFI	CTRYAG	2 cut(s)	303, 453
BstUI	CGCG	1 cut(s)	558
BstV1I	GCAGC	4 cut(s)	439, 467, 910, 1232
BstX2I	RGATCY	2 cut(s)	781, 992
BstXI	CCANNNNNNTGG	1 cut(s)	826
BstYI	RGATCY	2 cut(s)	781, 992
BsuI	GTATCC	1 cut(s)	932
BsuRI	GGCC	5 cut(s)	368, 702, 842, 1354, 1549
BtgI	CCRYGG	4 cut(s)	334, 837, 893, 1585
BtsCI	GGATG	4 cut(s)	160, 835, 968, 1525
BtsI	GCAGTG	1 cut(s)	300
BtsIMutI	CAGTG	4 cut(s)	203, 300, 690, 877
BveI	ACCTGC	1 cut(s)	11
Cac8I	GCNNGC	3 cut(s)	1212, 1323, 1495
CaiI	CAGNNNCTG	1 cut(s)	235
CciI	TCATGA	1 cut(s)	273
CfoI	GCGC	3 cut(s)	583, 1288, 1402
Cfr10I	RCCGGY	1 cut(s)	1552
Cfr13I	GGNCC	2 cut(s)	141, 1015
Csp6I	GTAC	2 cut(s)	736, 1507
CspAI	ACCGGT	1 cut(s)	1552
CspCI	CAANNNNNGTGG	2 cut(s)	31, 66
CviQI	GTAC	2 cut(s)	736, 1507
DdeI	CTNAG	1 cut(s)	1361
DpnI	GATC	7 cut(s)	173, 361, 783, 994, 1116, 1455, 1463
DpnII	GATC	7 cut(s)	171, 359, 781, 992, 1114, 1453, 1461
DraIII	CACNNNGTG	1 cut(s)	138
DriI	GACNNNNNGTC	1 cut(s)	820
Eam1104I	CTCTTC	3 cut(s)	660, 1013, 1470
Eam1105I	GACNNNNNGTC	1 cut(s)	820
EarI	CTCTTC	3 cut(s)	660, 1013, 1470
Ecl136II	GAGCTC	1 cut(s)	670
Eco130I	CCWWGG	5 cut(s)	837, 863, 893, 1177, 1585
Eco147I	AGGCCT	1 cut(s)	702
Eco24I	GRGCYC	1 cut(s)	672
Eco47I	GGWCC	2 cut(s)	141, 1015
Eco47III	AGCGCT	2 cut(s)	1287, 1401
Eco53kI	GAGCTC	1 cut(s)	670
Eco88I	CYCGRG	3 cut(s)	160, 1292, 1385
EcoICRI	GAGCTC	1 cut(s)	670
EcoO109I	RGGNCCY	1 cut(s)	1015
EcoRII	CCWGG	1 cut(s)	1194
EcoT14I	CCWWGG	5 cut(s)	837, 863, 893, 1177, 1585
EcoT22I	ATGCAT	2 cut(s)	73, 1025
EcoT38I	GRGCYC	1 cut(s)	672
ErhI	CCWWGG	5 cut(s)	837, 863, 893, 1177, 1585
Esp3I	CGTCTC	1 cut(s)	1430
FaqI	GGGAC	2 cut(s)	339, 358
FblI	GTMKAC	1 cut(s)	637
Fnu4HI	GCNGC	9 cut(s)	233, 432, 453, 456, 899, 1087, 1221, 1224, 1413
FokI	GGATG	4 cut(s)	167, 842, 975, 1532
FriOI	GRGCYC	1 cut(s)	672
Fsp4HI	GCNGC	9 cut(s)	233, 432, 453, 456, 899, 1087, 1221, 1224, 1413
FspBI	CTAG	5 cut(s)	704, 708, 968, 1178, 1217
FspI	TGCGCA	1 cut(s)	582
GlaI	GCGC	3 cut(s)	582, 1287, 1401
GluI	GCNGC	9 cut(s)	233, 432, 453, 456, 899, 1087, 1221, 1224, 1413
HaeII	RGCGCY	2 cut(s)	1289, 1403
HaeIII	GGCC	5 cut(s)	368, 702, 842, 1354, 1549
HapII	CCGG	4 cut(s)	116, 399, 1334, 1553
HhaI	GCGC	3 cut(s)	583, 1288, 1402
Hin6I	GCGC	3 cut(s)	581, 1286, 1400
HinP1I	GCGC	3 cut(s)	581, 1286, 1400
HindIII	AAGCTT	2 cut(s)	692, 720
HinfI	GANTC	7 cut(s)	395, 507, 591, 634, 815, 1251, 1558
HpaII	CCGG	4 cut(s)	116, 399, 1334, 1553
HphI	GGTGA	4 cut(s)	181, 1109, 1369, 1567
Hpy166II	GTNNAC	3 cut(s)	141, 300, 638
Hpy188I	TCNGA	8 cut(s)	225, 405, 413, 428, 444, 984, 1114, 1396
Hpy188III	TCNNGA	9 cut(s)	274, 511, 523, 571, 660, 827, 873, 1100, 1348
Hpy8I	GTNNAC	3 cut(s)	141, 300, 638
Hpy99I	CGWCG	1 cut(s)	149
HpyAV	CCTTC	6 cut(s)	56, 159, 538, 692, 788, 1590
HpyCH4IV	ACGT	2 cut(s)	906, 921
HpyF10VI	GCNNNNNNNGC	8 cut(s)	266, 719, 848, 1092, 1188, 1220, 1229, 1418
HpyF3I	CTNAG	1 cut(s)	1361
HpySE526I	ACGT	2 cut(s)	906, 921
HspAI	GCGC	3 cut(s)	581, 1286, 1400
Kzo9I	GATC	7 cut(s)	171, 359, 781, 992, 1114, 1453, 1461
LguI	GCTCTTC	1 cut(s)	660
LmnI	GCTCC	6 cut(s)	129, 428, 449, 675, 1187, 1330
Lsp1109I	GCAGC	4 cut(s)	439, 467, 910, 1232
LweI	GCATC	1 cut(s)	1430
MaeI	CTAG	5 cut(s)	704, 708, 968, 1178, 1217
MaeII	ACGT	2 cut(s)	906, 921
MaeIII	GTNAC	3 cut(s)	881, 1002, 1534
MalI	GATC	7 cut(s)	173, 361, 783, 994, 1116, 1455, 1463
MbiI	CCGCTC	1 cut(s)	431
MboI	GATC	7 cut(s)	171, 359, 781, 992, 1114, 1453, 1461
MboII	GAAGA	7 cut(s)	502, 586, 677, 758, 917, 1000, 1487
MflI	RGATCY	2 cut(s)	781, 992
MhlI	GDGCHC	2 cut(s)	134, 672
MluCI	AATT	5 cut(s)	652, 676, 911, 978, 1368
MlyI	GAGTC	3 cut(s)	643, 809, 1260
MmeI	TCCRAC	4 cut(s)	383, 1092, 1209, 1431
MnlI	CCTC	9 cut(s)	462, 772, 1130, 1302, 1344, 1394, 1459, 1479, 1539
Mph1103I	ATGCAT	2 cut(s)	73, 1025
MroXI	GAANNNNTTC	1 cut(s)	1401
MseI	TTAA	1 cut(s)	1597
MslI	CAYNNNNRTG	4 cut(s)	278, 464, 1122, 1518
MspA1I	CMGCKG	3 cut(s)	235, 1223, 1360
MspI	CCGG	4 cut(s)	116, 399, 1334, 1553
MspR9I	CCNGG	2 cut(s)	117, 1196
Mva1269I	GAATGC	4 cut(s)	73, 262, 868, 1023
MvaI	CCWGG	1 cut(s)	1196
MvnI	CGCG	1 cut(s)	558
MwoI	GCNNNNNNNGC	8 cut(s)	266, 719, 848, 1092, 1188, 1220, 1229, 1418
NciI	CCSGG	1 cut(s)	117
NcoI	CCATGG	3 cut(s)	837, 893, 1585
NdeII	GATC	7 cut(s)	171, 359, 781, 992, 1114, 1453, 1461
NlaIV	GGNNCC	5 cut(s)	783, 861, 1017, 1183, 1332
NmuCI	GTSAC	1 cut(s)	881
NsbI	TGCGCA	1 cut(s)	582
NsiI	ATGCAT	2 cut(s)	73, 1025
NspI	RCATGY	3 cut(s)	851, 1210, 1497
PaeI	GCATGC	1 cut(s)	1497
PaeR7I	CTCGAG	2 cut(s)	1292, 1385
PagI	TCATGA	1 cut(s)	273
PceI	AGGCCT	1 cut(s)	702
PciSI	GCTCTTC	1 cut(s)	660
PcsI	WCGNNNNNNNCGW	1 cut(s)	409
PctI	GAATGC	4 cut(s)	73, 262, 868, 1023
PdmI	GAANNNNTTC	1 cut(s)	1401
PfeI	GAWTC	4 cut(s)	395, 507, 591, 1558
PflFI	GACNNNGTC	2 cut(s)	38, 879
PinAI	ACCGGT	1 cut(s)	1552
PkrI	GCNGC	9 cut(s)	234, 433, 454, 457, 900, 1088, 1222, 1225, 1414
PleI	GAGTC	3 cut(s)	642, 809, 1259
PpsI	GAGTC	3 cut(s)	642, 809, 1259
Ppu21I	YACGTR	1 cut(s)	907
PpuMI	RGGWCCY	1 cut(s)	1015
PsiI	TTATAA	1 cut(s)	801
Psp124BI	GAGCTC	1 cut(s)	672
Psp1406I	AACGTT	1 cut(s)	921
Psp5II	RGGWCCY	1 cut(s)	1015
Psp6I	CCWGG	1 cut(s)	1194
PspGI	CCWGG	1 cut(s)	1194
PspN4I	GGNNCC	5 cut(s)	783, 861, 1017, 1183, 1332
PspPI	GGNCC	2 cut(s)	141, 1015
PspPPI	RGGWCCY	1 cut(s)	1015
PspXI	VCTCGAGB	2 cut(s)	1292, 1385
PstI	CTGCAG	2 cut(s)	307, 457
PstNI	CAGNNNCTG	1 cut(s)	235
PsuI	RGATCY	2 cut(s)	781, 992
PsyI	GACNNNGTC	2 cut(s)	38, 879
PvuII	CAGCTG	1 cut(s)	1360
RsaI	GTAC	2 cut(s)	737, 1508
RsaNI	GTAC	2 cut(s)	736, 1507
RseI	CAYNNNNRTG	4 cut(s)	278, 464, 1122, 1518
SacI	GAGCTC	1 cut(s)	672
SapI	GCTCTTC	1 cut(s)	660
SaqAI	TTAA	1 cut(s)	1597
SatI	GCNGC	9 cut(s)	233, 432, 453, 456, 899, 1087, 1221, 1224, 1413
Sau3AI	GATC	7 cut(s)	171, 359, 781, 992, 1114, 1453, 1461
Sau96I	GGNCC	2 cut(s)	141, 1015
ScaI	AGTACT	1 cut(s)	737
SchI	GAGTC	3 cut(s)	643, 809, 1260
ScrFI	CCNGG	2 cut(s)	117, 1196
SduI	GDGCHC	2 cut(s)	134, 672
SfaNI	GCATC	1 cut(s)	1430
SfcI	CTRYAG	2 cut(s)	303, 453
Sfr274I	CTCGAG	2 cut(s)	1292, 1385
SgrAI	CRCCGGYG	1 cut(s)	1552
SinI	GGWCC	2 cut(s)	141, 1015
SlaI	CTCGAG	2 cut(s)	1292, 1385
SmiMI	CAYNNNNRTG	4 cut(s)	278, 464, 1122, 1518
SmlI	CTYRAG	4 cut(s)	293, 1292, 1348, 1385
SmoI	CTYRAG	4 cut(s)	293, 1292, 1348, 1385
SphI	GCATGC	1 cut(s)	1497
Sse9I	AATT	5 cut(s)	652, 676, 911, 978, 1368
SseBI	AGGCCT	1 cut(s)	702
SsiI	CCGC	6 cut(s)	233, 431, 556, 1087, 1223, 1413
SspI	AATATT	1 cut(s)	1528
SspMI	CTAG	5 cut(s)	704, 708, 968, 1178, 1217
SstI	GAGCTC	1 cut(s)	672
StuI	AGGCCT	1 cut(s)	702
StyD4I	CCNGG	2 cut(s)	115, 1194
StyI	CCWWGG	5 cut(s)	837, 863, 893, 1177, 1585
TaiI	ACGT	2 cut(s)	909, 924
TaqI	TCGA	5 cut(s)	928, 1046, 1293, 1386, 1464
TasI	AATT	5 cut(s)	652, 676, 911, 978, 1368
TatI	WGTACW	1 cut(s)	735
TauI	GCSGC	5 cut(s)	235, 434, 1089, 1226, 1415
TfiI	GAWTC	4 cut(s)	395, 507, 591, 1558
Tru1I	TTAA	1 cut(s)	1597
Tru9I	TTAA	1 cut(s)	1597
TscAI	CASTG	4 cut(s)	210, 307, 690, 884
TseFI	GTSAC	1 cut(s)	881
TseI	GCWGC	4 cut(s)	452, 455, 898, 1220
Tsp45I	GTSAC	1 cut(s)	881
TspDTI	ATGAA	8 cut(s)	5, 75, 119, 364, 412, 807, 846, 1140
TspGWI	ACGGA	1 cut(s)	1395
TspRI	CASTG	4 cut(s)	210, 307, 690, 884
Tth111I	GACNNNGTC	2 cut(s)	38, 879
VpaK11BI	GGWCC	2 cut(s)	141, 1015
XapI	RAATTY	1 cut(s)	978
XceI	RCATGY	3 cut(s)	851, 1210, 1497
XhoI	CTCGAG	2 cut(s)	1292, 1385
XmaJI	CCTAGG	1 cut(s)	1177
XmiI	GTMKAC	1 cut(s)	637
XmnI	GAANNNNTTC	1 cut(s)	1401
XspI	CTAG	5 cut(s)	704, 708, 968, 1178, 1217
ZrmI	AGTACT	1 cut(s)	737
Zsp2I	ATGCAT	2 cut(s)	73, 1025

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.