Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0010183

Physical Location & Seq

Genomic Coordinates Forward (+)

1121345 .. 1125736

Gene Structure 4392 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00218910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGGTATACCCAGCTGCAGTTGCAGCTCATCCATCTGAACCTAATCAGTTTGCCATTGGACTTAGTGATGGTGGAGTTTGTAGCTCCTCAAAATGCACGAGAGGTGTTGACATACACACAAGAAAAATCAAGCTGCTAGCTCCCAGCTGTTTTGAGTACAACAGCTATGCATATGAAGCATCATTGCATATGCAAACGAGCTCTATGTTTCCCAAAGTTCATGCAGGCATGGATATGGAAATGAACAGCAACATGGATTGTGGGAAAAGCAAAGGCATCATTGGAGAGAAGAGTATGCGAATTCTTGTTGACAAGATGAAAAAATACCCGGTTTCTATTTGGAGGACCTTGTGGAAAGTGGGAAGAGATGATCCAAGAAGAGCGATCCATGCTGTGAAAGTTGGTCTGGCTTTGACACTGGTCTCATTGTTGTATCTGTTGCAGCCACTCTTCACTGGGATTGGACAGAATGCCATTTGGGCTGTCATGACTGTTGTTGTTGTGCTAGAGTTCACTGCAGGGGCAACTTTATGCAAAGGACTCAACAGAGGATTGGGGACACTGTTAGCTGGATCTTTGGCATTTTTCATTGAGTATATTGCAACTGAATCTGGTCACATATTTCGTGCAGTTTTCATTGGAGCTGCAGTTTTCCTGATAGGAGCTGCAGCAACATATATCAGGTTCATTCCTTATATTAGGAAGAACTATGATTATGGAGTTGTCATATTTCTCTTGACCTTCAATCTGATAACTGTGTCAAGCTACCGTGTTGACAATGTCATGAAAATCGCTCATGATCGCTTCTTCACCATCGCTATAGGCTGTGGTGTCTGCCTCCTTATGAGTCTTCTGGTATTTCCAAATTGGTCAGGAGAAGAGCTACATAGTTCCACTGTCTTCAAGCTTGAAGGCCTAGCTAGATCTATTGAAGCTTGTGTGAATGAGTACTTCAGTGAACAAGATCAAATAGAAGCAAACCAAGACAAATCAACTGAGGATCCAATATATGAAGGTTATAAGGCTGTTTTGGACTCAAAATCTTTTGATGAAACCATGGCCTTACATGCAAGTTGGGAACCAAGGCACTCAAGGCACTGTTACAGATTTCCATGGCAGCAATATGTCAAATTGGGAAATGTTCTTCGCCATTTCGGGTACACTATTGTAGCTCTACATGGATGTCTACGAACTGAAATTCAGACCCCAAGATCTGTTAGAGGTCTATTCAAGGACCCCTGCATTAGGCTTGCAGGAGAAGTATCAAAAGGACTAAAGGAACTGGCCAACAGCGTTAGGAATCGTCGCCATTGCTCCCCCGAAATACTCTCTGATCATCTCCATGAAGCCTTACAAGACCTCAACACCGCCATAAAGTCACAACCGAGACTTTTCCTAGGCGCAAACAGCAACCAGGCTACCAACATGCTTGCTTTAGCAGCTGCACATGCCACATCCCAAAAGCACGCAAAGTACTCGTCAGGGGGAGGAGGAGTTTCTTTGTCAAGTGTGAAAACCGACAACTCTGCATTGATGGAATGGAAATCCAAGAGGGAGTCTTCCGAGAGGAAGTTCCTGCGGCCACAGTTGAGCAAAATCGCAATAACTAGCCTCGAGTTCTCAGAAGCACTTCCTTTTGCTGCCTTTGCTGCTTTGCTGGTGGAGACAGTGGCAAAGCTTGACAATGTGATTGAGGAAGTTGAAGAACTGGGAAGGATTGCATGCTTCAAAGAGTATGAACATGGTGATGAGAATATTGTTGTTACTAGTGACAAGCCACAAATAATTGATGTAACTCAAAACCAATTGCCTTCCCATGGTGTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0009987 GO:0010118 GO:0012505 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

609

Amino Acids

67.53

Weight (kDa)

8.12

Isoelectric Point (pI)

34.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	118 - 571	1.7e-174	Aluminium activated malate transporter
FUSC_2	PF13515	150 - 281	6.5e-13	Fusaric acid resistance protein-like
FUSC	PF04632	157 - 319	3.9e-09	Fusaric acid resistance protein family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17970
fragaria_vesca	FvH4_5g21690
malus_domestica	MD06G1032000.v1.1 MD16G1276700.v1.1
prunus_persica	Prupe.5G040200_v2.0.a1
pyrus_communis	pycom06g02650
rosa_chinensis	RchiOBHm_Chr7g0209201 RchiOBHm_Chr7g0241571
rosa_laevigata	RLG00000000564 RLG00000003158
rosa_multiflora	Rmu_sc0002268.1_g000019
rosa_roxburghii	Rroxscaffold_3G00218910 Rroxscaffold_3G00249650
rosa_rugosa	Rorug07G0110100 Rorug07G0345300
rosa_samantha	Rh7AG244200 Rh7CG259700 Rh7DG251000 Rh7DG484800
rosa_wichuraiana	Rw7G020710 Rw7G042210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1020
AccI	GTMKAC	2 cut(s)	6, 1186
AciI	CCGC	2 cut(s)	1368, 1579
AclWI	GGATC	5 cut(s)	365, 379, 580, 995, 1008
AcoI	YGGCCR	2 cut(s)	1284, 1580
AcsI	RAATTY	2 cut(s)	300, 1197
AcuI	CTGAAG	1 cut(s)	937
AfaI	GTAC	4 cut(s)	158, 950, 1160, 1475
AfiI	CCNNNNNNNGG	2 cut(s)	1245, 1817
AgsI	TTSAA	7 cut(s)	745, 904, 911, 932, 1231, 1703, 1729
AhlI	ACTAGT	1 cut(s)	1766
AjnI	CCWGG	1 cut(s)	1413
Alw21I	GWGCWC	1 cut(s)	203
Alw26I	GTCTC	3 cut(s)	427, 1381, 1658
AlwI	GGATC	5 cut(s)	365, 379, 580, 995, 1008
Ama87I	CYCGRG	1 cut(s)	1613
AoxI	GGCC	4 cut(s)	913, 1059, 1284, 1580
ApoI	RAATTY	2 cut(s)	300, 1197
ArsI	GACNNNNNNTTYG	2 cut(s)	1463, 1495
Asp700I	GAANNNNTTC	1 cut(s)	1629
AspA2I	CCTAGG	1 cut(s)	1396
AspLEI	GCGC	1 cut(s)	1403
AspS9I	GGNCC	2 cut(s)	345, 1234
AsuC2I	CCSGG	1 cut(s)	329
AsuHPI	GGTGA	2 cut(s)	802, 1757
AsuNHI	GCTAGC	1 cut(s)	136
AvaI	CYCGRG	1 cut(s)	1613
AvaII	GGWCC	2 cut(s)	345, 1234
AvrII	CCTAGG	1 cut(s)	1396
BalI	TGGCCA	1 cut(s)	1286
BamHI	GGATCC	1 cut(s)	1000
BanII	GRGCYC	1 cut(s)	203
BauI	CACGAG	1 cut(s)	97
BbsI	GAAGAC	3 cut(s)	842, 892, 1551
Bbv12I	GWGCWC	1 cut(s)	203
BccI	CCATC	4 cut(s)	40, 62, 821, 1528
BcgI	CGANNNNNNTGC	4 cut(s)	1458, 1492, 1508, 1542
BciT130I	CCWGG	1 cut(s)	1415
BclI	TGATCA	1 cut(s)	1333
BcnI	CCSGG	1 cut(s)	329
BcoDI	GTCTC	3 cut(s)	427, 1381, 1658
BcuI	ACTAGT	1 cut(s)	1766
BfaI	CTAG	7 cut(s)	137, 506, 917, 921, 1397, 1608, 1767
BfmI	CTRYAG	5 cut(s)	15, 516, 645, 666, 819
BglI	GCCNNNNNGGC	1 cut(s)	479
BglII	AGATCT	2 cut(s)	923, 1211
BlnI	CCTAGG	1 cut(s)	1396
BmcAI	AGTACT	2 cut(s)	950, 1475
Bme1390I	CCNGG	2 cut(s)	329, 1415
Bme18I	GGWCC	2 cut(s)	345, 1234
BmeT110I	CYCGRG	1 cut(s)	1613
BmgT120I	GGNCC	2 cut(s)	345, 1234
BmiI	GGNNCC	3 cut(s)	1002, 1080, 1236
BmrFI	CCNGG	2 cut(s)	329, 1415
BmrI	ACTGGG	2 cut(s)	465, 1718
BmsI	GCATC	2 cut(s)	188, 285
BmtI	GCTAGC	1 cut(s)	140
BmuI	ACTGGG	2 cut(s)	465, 1718
BoxI	GACNNNNGTC	1 cut(s)	419
BpiI	GAAGAC	3 cut(s)	842, 892, 1551
BpuEI	CTTGAG	1 cut(s)	1075
BpuMI	CCSGG	1 cut(s)	329
BsaI	GGTCTC	1 cut(s)	427
BsaJI	CCNNGG	5 cut(s)	1056, 1082, 1112, 1396, 1816
BsaXI	ACNNNNNCTCC	4 cut(s)	633, 663, 1479, 1509
Bsc4I	CCNNNNNNNGG	2 cut(s)	1245, 1817
Bse1I	ACTGG	4 cut(s)	423, 460, 1287, 1713
Bse3DI	GCAATG	2 cut(s)	182, 1309
BseBI	CCWGG	1 cut(s)	1415
BseDI	CCNNGG	5 cut(s)	1056, 1082, 1112, 1396, 1816
BseGI	GGATG	3 cut(s)	28, 1187, 1454
BseLI	CCNNNNNNNGG	2 cut(s)	1245, 1817
BseMI	GCAATG	2 cut(s)	182, 1309
BseMII	CTCAG	2 cut(s)	987, 1635
BseNI	ACTGG	4 cut(s)	423, 460, 1287, 1713
BseRI	GAGGAG	3 cut(s)	76, 1503, 1506
BseYI	CCCAGC	2 cut(s)	10, 143
BsgI	GTGCAG	2 cut(s)	648, 1428
BshFI	GGCC	4 cut(s)	915, 1061, 1286, 1582
BsiHKAI	GWGCWC	1 cut(s)	203
BsiHKCI	CYCGRG	1 cut(s)	1613
BsiSI	CCGG	1 cut(s)	329
BslFI	GGGAC	1 cut(s)	571
BslI	CCNNNNNNNGG	2 cut(s)	1245, 1817
BsmAI	GTCTC	3 cut(s)	427, 1381, 1658
BsmFI	GGGAC	1 cut(s)	571
BsmI	GAATGC	1 cut(s)	475
BsnI	GGCC	4 cut(s)	915, 1061, 1286, 1582
Bso31I	GGTCTC	1 cut(s)	427
BsoBI	CYCGRG	1 cut(s)	1613
Bsp1286I	GDGCHC	1 cut(s)	203
Bsp143I	GATC	9 cut(s)	370, 384, 572, 799, 923, 964, 1000, 1211, 1333
Bsp19I	CCATGG	3 cut(s)	1056, 1112, 1816
BspACI	CCGC	2 cut(s)	1368, 1579
BspANI	GGCC	4 cut(s)	915, 1061, 1286, 1582
BspCNI	CTCAG	2 cut(s)	988, 1634
BspHI	TCATGA	3 cut(s)	486, 783, 796
BspLI	GGNNCC	3 cut(s)	1002, 1080, 1236
BspMAI	CTGCAG	4 cut(s)	19, 520, 649, 670
BspOI	GCTAGC	1 cut(s)	140
BspPI	GGATC	5 cut(s)	365, 379, 580, 995, 1008
BspQI	GCTCTTC	2 cut(s)	373, 873
BspTNI	GGTCTC	1 cut(s)	427
BsrDI	GCAATG	2 cut(s)	182, 1309
BsrI	ACTGG	4 cut(s)	423, 460, 1287, 1713
BssECI	CCNNGG	5 cut(s)	1056, 1082, 1112, 1396, 1816
BssMI	GATC	9 cut(s)	370, 384, 572, 799, 923, 964, 1000, 1211, 1333
BssNAI	GTATAC	1 cut(s)	7
BssSI	CACGAG	1 cut(s)	97
BssT1I	CCWWGG	5 cut(s)	1056, 1082, 1112, 1396, 1816
Bst1107I	GTATAC	1 cut(s)	7
Bst2BI	CACGAG	1 cut(s)	97
Bst2UI	CCWGG	1 cut(s)	1415
Bst4CI	ACNGT	8 cut(s)	493, 564, 757, 770, 898, 1100, 1587, 1669
Bst6I	CTCTTC	5 cut(s)	284, 358, 373, 455, 873
BstC8I	GCNNGC	6 cut(s)	138, 226, 1251, 1431, 1467, 1723
BstDEI	CTNAG	3 cut(s)	62, 996, 1621
BstDSI	CCRYGG	3 cut(s)	1056, 1112, 1816
BstENI	CCTNNNNNAGG	1 cut(s)	1243
BstF5I	GGATG	3 cut(s)	28, 1187, 1454
BstHHI	GCGC	1 cut(s)	1403
BstKTI	GATC	9 cut(s)	373, 387, 575, 802, 926, 967, 1003, 1214, 1336
BstMAI	GTCTC	3 cut(s)	427, 1381, 1658
BstMBI	GATC	9 cut(s)	370, 384, 572, 799, 923, 964, 1000, 1211, 1333
BstNI	CCWGG	1 cut(s)	1415
BstNSI	RCATGY	4 cut(s)	1070, 1429, 1451, 1725
BstPAI	GACNNNNGTC	1 cut(s)	419
BstSCI	CCNGG	2 cut(s)	327, 1413
BstSFI	CTRYAG	5 cut(s)	15, 516, 645, 666, 819
BstV2I	GAAGAC	3 cut(s)	842, 892, 1551
BstX2I	RGATCY	4 cut(s)	572, 923, 1000, 1211
BstYI	RGATCY	4 cut(s)	572, 923, 1000, 1211
BstZ17I	GTATAC	1 cut(s)	7
BsuRI	GGCC	4 cut(s)	915, 1061, 1286, 1582
BtgI	CCRYGG	3 cut(s)	1056, 1112, 1816
BtgZI	GCGATG	1 cut(s)	799
BtsCI	GGATG	3 cut(s)	28, 1187, 1454
BtsI	GCAGTG	1 cut(s)	513
BtsIMutI	CAGTG	8 cut(s)	416, 453, 513, 560, 894, 961, 1096, 1674
Cac8I	GCNNGC	6 cut(s)	138, 226, 1251, 1431, 1467, 1723
CciI	TCATGA	3 cut(s)	486, 783, 796
CfoI	GCGC	1 cut(s)	1403
Cfr13I	GGNCC	2 cut(s)	345, 1234
Csp6I	GTAC	4 cut(s)	157, 949, 1159, 1474
CviQI	GTAC	4 cut(s)	157, 949, 1159, 1474
DdeI	CTNAG	3 cut(s)	62, 996, 1621
DpnI	GATC	9 cut(s)	372, 386, 574, 801, 925, 966, 1002, 1213, 1335
DpnII	GATC	9 cut(s)	370, 384, 572, 799, 923, 964, 1000, 1211, 1333
EaeI	YGGCCR	2 cut(s)	1284, 1580
Eam1104I	CTCTTC	5 cut(s)	284, 358, 373, 455, 873
EarI	CTCTTC	5 cut(s)	284, 358, 373, 455, 873
Ecl136II	GAGCTC	1 cut(s)	201
Eco130I	CCWWGG	5 cut(s)	1056, 1082, 1112, 1396, 1816
Eco147I	AGGCCT	1 cut(s)	915
Eco24I	GRGCYC	1 cut(s)	203
Eco31I	GGTCTC	1 cut(s)	427
Eco47I	GGWCC	2 cut(s)	345, 1234
Eco53kI	GAGCTC	1 cut(s)	201
Eco57I	CTGAAG	1 cut(s)	937
Eco88I	CYCGRG	1 cut(s)	1613
EcoICRI	GAGCTC	1 cut(s)	201
EcoNI	CCTNNNNNAGG	1 cut(s)	1243
EcoO109I	RGGNCCY	2 cut(s)	345, 1234
EcoRI	GAATTC	1 cut(s)	300
EcoRII	CCWGG	1 cut(s)	1413
EcoT14I	CCWWGG	5 cut(s)	1056, 1082, 1112, 1396, 1816
EcoT22I	ATGCAT	1 cut(s)	172
EcoT38I	GRGCYC	1 cut(s)	203
ErhI	CCWWGG	5 cut(s)	1056, 1082, 1112, 1396, 1816
FaqI	GGGAC	1 cut(s)	571
FauNDI	CATATG	2 cut(s)	172, 189
FbaI	TGATCA	1 cut(s)	1333
FblI	GTMKAC	2 cut(s)	6, 1186
FokI	GGATG	3 cut(s)	15, 1194, 1441
FriOI	GRGCYC	1 cut(s)	203
FspBI	CTAG	7 cut(s)	137, 506, 917, 921, 1397, 1608, 1767
GlaI	GCGC	1 cut(s)	1402
GsaI	CCCAGC	2 cut(s)	14, 147
HaeIII	GGCC	4 cut(s)	915, 1061, 1286, 1582
HapII	CCGG	1 cut(s)	329
HhaI	GCGC	1 cut(s)	1403
Hin6I	GCGC	1 cut(s)	1401
HinP1I	GCGC	1 cut(s)	1401
HincII	GTYRAC	3 cut(s)	109, 310, 775
HindII	GTYRAC	3 cut(s)	109, 310, 775
HindIII	AAGCTT	3 cut(s)	905, 933, 1676
HinfI	GANTC	6 cut(s)	540, 608, 847, 1034, 1300, 1556
HpaII	CCGG	1 cut(s)	329
HphI	GGTGA	2 cut(s)	802, 1757
Hpy166II	GTNNAC	8 cut(s)	7, 109, 310, 513, 775, 959, 1161, 1187
Hpy188I	TCNGA	6 cut(s)	37, 750, 1203, 1333, 1564, 1624
Hpy188III	TCNNGA	6 cut(s)	487, 655, 736, 784, 797, 873
Hpy8I	GTNNAC	8 cut(s)	7, 109, 310, 513, 775, 959, 1161, 1187
Hpy99I	CGWCG	1 cut(s)	1308
HpyAV	CCTTC	5 cut(s)	751, 905, 1007, 1707, 1821
HpyCH4III	ACNGT	8 cut(s)	493, 564, 757, 770, 898, 1100, 1587, 1669
HpyF3I	CTNAG	3 cut(s)	62, 996, 1621
HspAI	GCGC	1 cut(s)	1401
Ksp22I	TGATCA	1 cut(s)	1333
Kzo9I	GATC	9 cut(s)	370, 384, 572, 799, 923, 964, 1000, 1211, 1333
LguI	GCTCTTC	2 cut(s)	373, 873
LmnI	GCTCC	5 cut(s)	89, 145, 641, 662, 1319
LweI	GCATC	2 cut(s)	188, 285
MaeI	CTAG	7 cut(s)	137, 506, 917, 921, 1397, 1608, 1767
MaeIII	GTNAC	6 cut(s)	614, 1100, 1377, 1762, 1769, 1792
MalI	GATC	9 cut(s)	372, 386, 574, 801, 925, 966, 1002, 1213, 1335
MboI	GATC	9 cut(s)	370, 384, 572, 799, 923, 964, 1000, 1211, 1333
MfeI	CAATTG	1 cut(s)	1805
MflI	RGATCY	4 cut(s)	572, 923, 1000, 1211
MhlI	GDGCHC	1 cut(s)	203
MlsI	TGGCCA	1 cut(s)	1286
MluCI	AATT	6 cut(s)	300, 865, 1130, 1197, 1785, 1805
MluNI	TGGCCA	1 cut(s)	1286
MlyI	GAGTC	4 cut(s)	534, 856, 1028, 1565
Mox20I	TGGCCA	1 cut(s)	1286
Mph1103I	ATGCAT	1 cut(s)	172
MroXI	GAANNNNTTC	1 cut(s)	1629
MscI	TGGCCA	1 cut(s)	1286
MseI	TTAA	1 cut(s)	1828
MslI	CAYNNNNRTG	3 cut(s)	233, 1341, 1746
Msp20I	TGGCCA	1 cut(s)	1286
MspA1I	CMGCKG	3 cut(s)	14, 147, 1442
MspI	CCGG	1 cut(s)	329
MspR9I	CCNGG	2 cut(s)	329, 1415
MunI	CAATTG	1 cut(s)	1805
Mva1269I	GAATGC	1 cut(s)	475
MvaI	CCWGG	1 cut(s)	1415
NciI	CCSGG	1 cut(s)	329
NcoI	CCATGG	3 cut(s)	1056, 1112, 1816
NdeI	CATATG	2 cut(s)	172, 189
NdeII	GATC	9 cut(s)	370, 384, 572, 799, 923, 964, 1000, 1211, 1333
NheI	GCTAGC	1 cut(s)	136
NlaIV	GGNNCC	3 cut(s)	1002, 1080, 1236
NmuCI	GTSAC	3 cut(s)	614, 1377, 1769
NsiI	ATGCAT	1 cut(s)	172
NspI	RCATGY	4 cut(s)	1070, 1429, 1451, 1725
PaeI	GCATGC	1 cut(s)	1725
PaeR7I	CTCGAG	1 cut(s)	1613
PagI	TCATGA	3 cut(s)	486, 783, 796
PceI	AGGCCT	1 cut(s)	915
PciSI	GCTCTTC	2 cut(s)	373, 873
PctI	GAATGC	1 cut(s)	475
PdmI	GAANNNNTTC	1 cut(s)	1629
PfeI	GAWTC	2 cut(s)	608, 1300
PflFI	GACNNNGTC	1 cut(s)	779
PleI	GAGTC	4 cut(s)	534, 855, 1028, 1564
PpsI	GAGTC	4 cut(s)	534, 855, 1028, 1564
PpuMI	RGGWCCY	2 cut(s)	345, 1234
PshAI	GACNNNNGTC	1 cut(s)	419
PsiI	TTATAA	1 cut(s)	1020
Psp124BI	GAGCTC	1 cut(s)	203
Psp5II	RGGWCCY	2 cut(s)	345, 1234
Psp6I	CCWGG	1 cut(s)	1413
PspFI	CCCAGC	2 cut(s)	10, 143
PspGI	CCWGG	1 cut(s)	1413
PspN4I	GGNNCC	3 cut(s)	1002, 1080, 1236
PspPI	GGNCC	2 cut(s)	345, 1234
PspPPI	RGGWCCY	2 cut(s)	345, 1234
PspXI	VCTCGAGB	1 cut(s)	1613
PstI	CTGCAG	4 cut(s)	19, 520, 649, 670
PsuI	RGATCY	4 cut(s)	572, 923, 1000, 1211
PsyI	GACNNNGTC	1 cut(s)	779
PvuII	CAGCTG	3 cut(s)	14, 147, 1442
RsaI	GTAC	4 cut(s)	158, 950, 1160, 1475
RsaNI	GTAC	4 cut(s)	157, 949, 1159, 1474
RseI	CAYNNNNRTG	3 cut(s)	233, 1341, 1746
SacI	GAGCTC	1 cut(s)	203
SapI	GCTCTTC	2 cut(s)	373, 873
SaqAI	TTAA	1 cut(s)	1828
Sau3AI	GATC	9 cut(s)	370, 384, 572, 799, 923, 964, 1000, 1211, 1333
Sau96I	GGNCC	2 cut(s)	345, 1234
ScaI	AGTACT	2 cut(s)	950, 1475
SchI	GAGTC	4 cut(s)	534, 856, 1028, 1565
ScrFI	CCNGG	2 cut(s)	329, 1415
SduI	GDGCHC	1 cut(s)	203
SfaNI	GCATC	2 cut(s)	188, 285
SfcI	CTRYAG	5 cut(s)	15, 516, 645, 666, 819
Sfr274I	CTCGAG	1 cut(s)	1613
SinI	GGWCC	2 cut(s)	345, 1234
SlaI	CTCGAG	1 cut(s)	1613
SmiMI	CAYNNNNRTG	3 cut(s)	233, 1341, 1746
SmlI	CTYRAG	2 cut(s)	1090, 1613
SmoI	CTYRAG	2 cut(s)	1090, 1613
SpeI	ACTAGT	1 cut(s)	1766
SphI	GCATGC	1 cut(s)	1725
Sse9I	AATT	6 cut(s)	300, 865, 1130, 1197, 1785, 1805
SseBI	AGGCCT	1 cut(s)	915
SsiI	CCGC	2 cut(s)	1368, 1579
SspI	AATATT	1 cut(s)	1756
SspMI	CTAG	7 cut(s)	137, 506, 917, 921, 1397, 1608, 1767
SstI	GAGCTC	1 cut(s)	203
StuI	AGGCCT	1 cut(s)	915
StyD4I	CCNGG	2 cut(s)	327, 1413
StyI	CCWWGG	5 cut(s)	1056, 1082, 1112, 1396, 1816
TaaI	ACNGT	8 cut(s)	493, 564, 757, 770, 898, 1100, 1587, 1669
TaqI	TCGA	1 cut(s)	1614
TasI	AATT	6 cut(s)	300, 865, 1130, 1197, 1785, 1805
TatI	WGTACW	3 cut(s)	156, 948, 1473
TauI	GCSGC	1 cut(s)	1582
TfiI	GAWTC	2 cut(s)	608, 1300
Tru1I	TTAA	1 cut(s)	1828
Tru9I	TTAA	1 cut(s)	1828
TscAI	CASTG	8 cut(s)	423, 460, 520, 567, 901, 961, 1103, 1674
TseFI	GTSAC	3 cut(s)	614, 1377, 1769
Tsp45I	GTSAC	3 cut(s)	614, 1377, 1769
TspRI	CASTG	8 cut(s)	423, 460, 520, 567, 901, 961, 1103, 1674
Tth111I	GACNNNGTC	1 cut(s)	779
VpaK11BI	GGWCC	2 cut(s)	345, 1234
XagI	CCTNNNNNAGG	1 cut(s)	1243
XapI	RAATTY	2 cut(s)	300, 1197
XceI	RCATGY	4 cut(s)	1070, 1429, 1451, 1725
XhoI	CTCGAG	1 cut(s)	1613
XmaJI	CCTAGG	1 cut(s)	1396
XmiI	GTMKAC	2 cut(s)	6, 1186
XmnI	GAANNNNTTC	1 cut(s)	1629
XspI	CTAG	7 cut(s)	137, 506, 917, 921, 1397, 1608, 1767
ZrmI	AGTACT	2 cut(s)	950, 1475
Zsp2I	ATGCAT	1 cut(s)	172

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.