MD06G1127900.v1.1

Fringe-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0011882
Physical Location & Seq
Reverse (-)
26993360 .. 26996106
2747 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1127900.v1.1.491

Sequence Viewer

Length: 1488 bp
ATGACGACGACGCCAACAACAAACCCCAACAACGCCAATCCCAGACCACCCAAAAACCGCCGTTACCGTCGGAGCCACGTAGCCACCGCCGTCATCGCCGTCGCGGCCCTCTTGATCTCCACCACCGCCTGGCTCTCCCTTGTCTTCTCCGCCACTCCGCACTCCCTCCCCGCCCCCCAGTCCTTCACCCGCTCCCAAAGCCGCACTGTTTCCCGACACAGTGGACACTCCGAGGAGCTCACTCTAAACGACATCGTTTTCGGCATTGCCGGGTCGGCCCAACTCTGGAAGCAGCGGAAAGAGTACGTCCGGCTCTGGTGGCGCCAGGACGACATGCGCGGCCACGTCTGGCTGGAAGAGAAGCTACCGGAAAACGACGTCGATCGGTCCTTGCCGCCGATAATGGTATCCGAGGACATCTCGCGGTTTCGGTACACCAACCCGACGGGTCACCCGTCGGGGCTACGAATCTCCAGAATAGTCTCCGAGTGCTTCCGCCTCGGCCTCCCCAACGTCCGGTGGTTCGTCCTCGCCGACGACGACACCATCATCAACGCCGATAACCTCGTCGCGGTGCTGGGCAAGTACGACTCGTCGGAGATGGTTTATGTGGGAAGCCCGTCGGAGAGTCATTCTGCCAACACTTACTTCAGCCACTCTATGGCGTTTGGTGGCGGCGGCATTGCAATTAGCCACCCTCTGGCGGAAGCCCTGTCCGAAATGCAGGACCAGTGTCTCGAGAGGTACCCGAAGCTCTACGGGAGTGACGATCGCCTCCATGCCTGCATTACTGAGCTTGGGATTCCATTAACCAGAGAACCTGGCTTCCATCAGTGTGACATTAGGGGTAATGCGCACGGTCTTTTATCTTCGCATCCTATAGCACCATTTGTGTCCATTCACCATGTTGAAGCTGTCGACCCTTTTTATCCCGGCTCTACCTCTCTGCAAAGTTTGAAGCTTTTCACACAGGCAATGAGACTCCAACCCACCAGTTTTTTGCAGCGGTCCATTTGCTATGATCATCGACACGGTCTCACATTTTCAGTCTCACTTGGGTATGTGGTTCAAGTATTCCCAAACATTGTGCTTCCCCGTGACCTTGAGCGCTCAGAGCAGACTTACTCTGCTTGGAATGGGATAAGTCAAAGGAATGAATTCGATTTTGATACCAAAGACCCTTATAGATCTGTTTGTAAGAAGCCTATTTTATTCTTCTTGAAAGATGTTAGGAAACAAGGGAATGCTACATTGGGGTCATATATGCGGAGCAAAGCAAAAGATGAATTCAAGAGAAAGGTTTTCTGCTTTTCCCGATTTCGACTATTGCGCAATCTGCAAAAAATTCAAGTTTTGGGCTATCCGCCAACCAAGAAATGGCATTTGGTACCTAGTCGGTTATGTTGCAAACTGAACCAAACAAGTGAGGCAGTTGTCAGTTTAACAGTCGGACAGTGTGGTAAAGGACCCTTTCGGCTTCATTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF604

Protein Analysis

496

Amino Acids

56.04

Weight (kDa)

9.36

Isoelectric Point (pI)

49.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fringe PF02434 171 - 278 7.6e-18 Fringe-like
DUF604 PF04646 214 - 469 1.4e-100 Protein of unknown function, DUF604
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011882)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33250
fragaria_vesca FvH4_5g10130
malus_domestica MD06G1127900.v1.1 MD14G1143700.v1.1
prunus_persica Prupe.5G137700_v2.0.a1 Prupe.5G137700_v2.0.a1
pyrus_communis pycom06g11820 pycom14g11910
rosa_chinensis RchiOBHm_Chr7g0188171
rosa_laevigata RLG00000004722
rosa_multiflora Rmu_sc0004001.1_g000001
rosa_roxburghii Rroxscaffold_3G00266710
rosa_rugosa Rorug06G0488800 Rorug06G0488900.1
rosa_samantha Rh7AG093000 Rh7BG094600 Rh7CG094300 Rh7DG095000
rosa_wichuraiana Rw7G008030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 381
Acc16I TGCGCA 2 cut(s) 855, 1331
Acc65I GGTACC 2 cut(s) 744, 1387
AccB1I GGYRCC 3 cut(s) 321, 744, 1387
AccB7I CCANNNNNTGG 4 cut(s) 129, 661, 700, 1377
AccBSI CCGCTC 1 cut(s) 192
AccI GTMKAC 1 cut(s) 918
AccII CGCG 4 cut(s) 104, 339, 424, 572
AcoI YGGCCR 1 cut(s) 340
AcsI RAATTY 3 cut(s) 1157, 1286, 1344
AcuI CTGAAG 1 cut(s) 634
AcyI GRCGYC 3 cut(s) 11, 322, 378
AfaI GTAC 5 cut(s) 305, 434, 587, 746, 1389
AfeI AGCGCT 1 cut(s) 1109
AfiI CCNNNNNNNGG 8 cut(s) 129, 285, 516, 571, 661, 700, 703, 1377
AgsI TTSAA 6 cut(s) 911, 958, 1070, 1222, 1291, 1349
AjiI CACGTC 1 cut(s) 346
AjnI CCWGG 3 cut(s) 128, 324, 820
AjuI GAANNNNNNNTTGG 6 cut(s) 632, 664, 1235, 1267, 1367, 1399
AloI GAACNNNNNNTCC 2 cut(s) 810, 842
AluBI AGCT 6 cut(s) 238, 364, 754, 796, 914, 961
AluI AGCT 6 cut(s) 238, 364, 754, 796, 914, 961
Alw21I GWGCWC 1 cut(s) 240
Alw26I GTCTC 5 cut(s) 487, 740, 973, 1040, 1054
Ama87I CYCGRG 1 cut(s) 737
Aor51HI AGCGCT 1 cut(s) 1109
AoxI GGCC 4 cut(s) 105, 276, 340, 502
ApeKI GCWGC 2 cut(s) 292, 1003
ApoI RAATTY 3 cut(s) 1157, 1286, 1344
ArsI GACNNNNNNTTYG 2 cut(s) 242, 274
Asp700I GAANNNNTTC 2 cut(s) 962, 1157
Asp718I GGTACC 2 cut(s) 744, 1387
AspLEI GCGC 5 cut(s) 324, 339, 856, 1110, 1332
AspS9I GGNCC 6 cut(s) 106, 277, 387, 727, 1008, 1466
AsuC2I CCSGG 2 cut(s) 271, 933
AsuHPI GGTGA 3 cut(s) 178, 443, 893
AvaI CYCGRG 1 cut(s) 737
AvaII GGWCC 4 cut(s) 387, 727, 1008, 1466
BanI GGYRCC 3 cut(s) 321, 744, 1387
BanII GRGCYC 1 cut(s) 240
BarI GAAGNNNNNNTAC 2 cut(s) 348, 380
BbsI GAAGAC 1 cut(s) 136
Bbv12I GWGCWC 1 cut(s) 240
BbvI GCAGC 2 cut(s) 304, 1015
BccI CCATC 3 cut(s) 554, 595, 837
BceAI ACGGC 3 cut(s) 45, 74, 83
BciT130I CCWGG 3 cut(s) 130, 326, 822
BciVI GTATCC 1 cut(s) 418
BclI TGATCA 1 cut(s) 1021
BcnI CCSGG 2 cut(s) 271, 933
BcoDI GTCTC 5 cut(s) 487, 740, 973, 1040, 1054
BfaI CTAG 1 cut(s) 1392
BfmI CTRYAG 1 cut(s) 879
BfoI RGCGCY 2 cut(s) 325, 1111
BfuI GTATCC 1 cut(s) 418
BglI GCCNNNNNGGC 2 cut(s) 104, 275
BglII AGATCT 1 cut(s) 1187
BisI GCNGC 8 cut(s) 105, 202, 293, 340, 395, 676, 679, 1004
BlsI GCNGC 8 cut(s) 106, 203, 294, 341, 396, 677, 680, 1005
Bme1390I CCNGG 5 cut(s) 130, 271, 326, 822, 933
Bme18I GGWCC 4 cut(s) 387, 727, 1008, 1466
BmeT110I CYCGRG 1 cut(s) 737
BmgBI CACGTC 1 cut(s) 346
BmgT120I GGNCC 6 cut(s) 106, 277, 387, 727, 1008, 1466
BmiI GGNNCC 5 cut(s) 74, 323, 746, 1389, 1468
BmrFI CCNGG 5 cut(s) 130, 271, 326, 822, 933
BmrI ACTGGG 1 cut(s) 172
BmsI GCATC 1 cut(s) 883
BmuI ACTGGG 1 cut(s) 172
BoxI GACNNNNGTC 1 cut(s) 732
BpiI GAAGAC 1 cut(s) 136
BplI GAGNNNNNCTC 2 cut(s) 404, 436
BpmI CTGGAG 1 cut(s) 457
BpuEI CTTGAG 1 cut(s) 1124
BpuMI CCSGG 2 cut(s) 271, 933
BsaAI YACGTR 1 cut(s) 79
BsaHI GRCGYC 3 cut(s) 11, 322, 378
BsaI GGTCTC 1 cut(s) 1040
BsaJI CCNNGG 3 cut(s) 231, 411, 499
BsaWI WCCGGW 2 cut(s) 367, 516
Bsc4I CCNNNNNNNGG 8 cut(s) 129, 285, 516, 571, 661, 700, 703, 1377
Bse1I ACTGG 3 cut(s) 178, 730, 993
Bse3DI GCAATG 3 cut(s) 264, 681, 981
BseBI CCWGG 3 cut(s) 130, 326, 822
BseDI CCNNGG 3 cut(s) 231, 411, 499
BseGI GGATG 1 cut(s) 874
BseLI CCNNNNNNNGG 8 cut(s) 129, 285, 516, 571, 661, 700, 703, 1377
BseMI GCAATG 3 cut(s) 264, 681, 981
BseMII CTCAG 2 cut(s) 783, 1125
BseNI ACTGG 3 cut(s) 178, 730, 993
BseRI GAGGAG 1 cut(s) 248
BseXI GCAGC 2 cut(s) 304, 1015
BseYI CCCAGC 1 cut(s) 577
Bsh1236I CGCG 4 cut(s) 104, 339, 424, 572
Bsh1285I CGRYCG 2 cut(s) 385, 772
BshFI GGCC 4 cut(s) 107, 278, 342, 504
BshNI GGYRCC 3 cut(s) 321, 744, 1387
BsiEI CGRYCG 2 cut(s) 385, 772
BsiHKAI GWGCWC 1 cut(s) 240
BsiHKCI CYCGRG 1 cut(s) 737
BsiSI CCGG 5 cut(s) 270, 310, 368, 517, 933
BslI CCNNNNNNNGG 8 cut(s) 129, 285, 516, 571, 661, 700, 703, 1377
BsmAI GTCTC 5 cut(s) 487, 740, 973, 1040, 1054
BsmI GAATGC 1 cut(s) 1249
BsnI GGCC 4 cut(s) 107, 278, 342, 504
Bso31I GGTCTC 1 cut(s) 1040
BsoBI CYCGRG 1 cut(s) 737
Bsp1286I GDGCHC 1 cut(s) 240
Bsp143I GATC 5 cut(s) 114, 382, 769, 1021, 1187
BspANI GGCC 4 cut(s) 107, 278, 342, 504
BspCNI CTCAG 2 cut(s) 784, 1124
BspFNI CGCG 4 cut(s) 104, 339, 424, 572
BspLI GGNNCC 5 cut(s) 74, 323, 746, 1389, 1468
BspT107I GGYRCC 3 cut(s) 321, 744, 1387
BspTNI GGTCTC 1 cut(s) 1040
BsrBI CCGCTC 1 cut(s) 192
BsrDI GCAATG 3 cut(s) 264, 681, 981
BsrI ACTGG 3 cut(s) 178, 730, 993
BssECI CCNNGG 3 cut(s) 231, 411, 499
BssMI GATC 5 cut(s) 114, 382, 769, 1021, 1187
BssNI GRCGYC 3 cut(s) 11, 322, 378
Bst2UI CCWGG 3 cut(s) 130, 326, 822
Bst4CI ACNGT 7 cut(s) 68, 208, 221, 860, 1034, 1447, 1455
Bst6I CTCTTC 1 cut(s) 351
BstACI GRCGYC 3 cut(s) 11, 322, 378
BstBAI YACGTR 1 cut(s) 79
BstC8I GCNNGC 1 cut(s) 784
BstDEI CTNAG 2 cut(s) 792, 1111
BstEII GGTNACC 1 cut(s) 449
BstF5I GGATG 1 cut(s) 874
BstFNI CGCG 4 cut(s) 104, 339, 424, 572
BstH2I RGCGCY 2 cut(s) 325, 1111
BstHHI GCGC 5 cut(s) 324, 339, 856, 1110, 1332
BstKTI GATC 5 cut(s) 117, 385, 772, 1024, 1190
BstMAI GTCTC 5 cut(s) 487, 740, 973, 1040, 1054
BstMBI GATC 5 cut(s) 114, 382, 769, 1021, 1187
BstMCI CGRYCG 2 cut(s) 385, 772
BstMWI GCNNNNNNNGC 7 cut(s) 95, 104, 198, 275, 319, 1114, 1336
BstNI CCWGG 3 cut(s) 130, 326, 822
BstNSI RCATGY 1 cut(s) 337
BstPAI GACNNNNGTC 1 cut(s) 732
BstPI GGTNACC 1 cut(s) 449
BstSCI CCNGG 5 cut(s) 128, 269, 324, 820, 931
BstSFI CTRYAG 1 cut(s) 879
BstUI CGCG 4 cut(s) 104, 339, 424, 572
BstV1I GCAGC 2 cut(s) 304, 1015
BstV2I GAAGAC 1 cut(s) 136
BstX2I RGATCY 1 cut(s) 1187
BstYI RGATCY 1 cut(s) 1187
BsuI GTATCC 1 cut(s) 418
BsuRI GGCC 4 cut(s) 107, 278, 342, 504
BtgZI GCGATG 1 cut(s) 79
BtrI CACGTC 1 cut(s) 346
BtsCI GGATG 1 cut(s) 874
BtsIMutI CAGTG 5 cut(s) 204, 226, 737, 839, 1460
Cac8I GCNNGC 1 cut(s) 784
CfoI GCGC 5 cut(s) 324, 339, 856, 1110, 1332
Cfr13I GGNCC 6 cut(s) 106, 277, 387, 727, 1008, 1466
CseI GACGC 1 cut(s) 19
Csp6I GTAC 5 cut(s) 304, 433, 586, 745, 1388
CviAII CATG 3 cut(s) 334, 779, 905
CviQI GTAC 5 cut(s) 304, 433, 586, 745, 1388
DdeI CTNAG 2 cut(s) 792, 1111
DinI GGCGCC 1 cut(s) 323
DpnI GATC 5 cut(s) 116, 384, 771, 1023, 1189
DpnII GATC 5 cut(s) 114, 382, 769, 1021, 1187
EaeI YGGCCR 1 cut(s) 340
Eam1104I CTCTTC 1 cut(s) 351
EarI CTCTTC 1 cut(s) 351
EciI GGCGGA 4 cut(s) 139, 485, 719, 1353
Ecl136II GAGCTC 1 cut(s) 238
Eco24I GRGCYC 1 cut(s) 240
Eco31I GGTCTC 1 cut(s) 1040
Eco47I GGWCC 4 cut(s) 387, 727, 1008, 1466
Eco47III AGCGCT 1 cut(s) 1109
Eco53kI GAGCTC 1 cut(s) 238
Eco57I CTGAAG 1 cut(s) 634
Eco88I CYCGRG 1 cut(s) 737
Eco91I GGTNACC 1 cut(s) 449
EcoICRI GAGCTC 1 cut(s) 238
EcoO109I RGGNCCY 1 cut(s) 1466
EcoO65I GGTNACC 1 cut(s) 449
EcoRI GAATTC 2 cut(s) 1157, 1286
EcoRII CCWGG 3 cut(s) 128, 324, 820
EcoT38I GRGCYC 1 cut(s) 240
EgeI GGCGCC 1 cut(s) 323
EheI GGCGCC 1 cut(s) 323
FaeI CATG 3 cut(s) 337, 782, 908
FatI CATG 3 cut(s) 333, 778, 904
FauI CCCGC 2 cut(s) 178, 197
FbaI TGATCA 1 cut(s) 1021
FblI GTMKAC 1 cut(s) 918
Fnu4HI GCNGC 8 cut(s) 105, 202, 293, 340, 395, 676, 679, 1004
FokI GGATG 1 cut(s) 861
FriOI GRGCYC 1 cut(s) 240
Fsp4HI GCNGC 8 cut(s) 105, 202, 293, 340, 395, 676, 679, 1004
FspAI RTGCGCAY 1 cut(s) 855
FspBI CTAG 1 cut(s) 1392
FspI TGCGCA 2 cut(s) 855, 1331
GlaI GCGC 5 cut(s) 323, 338, 855, 1109, 1331
GluI GCNGC 8 cut(s) 105, 202, 293, 340, 395, 676, 679, 1004
GsaI CCCAGC 1 cut(s) 581
GsuI CTGGAG 1 cut(s) 457
HaeII RGCGCY 2 cut(s) 325, 1111
HaeIII GGCC 4 cut(s) 107, 278, 342, 504
HapII CCGG 5 cut(s) 270, 310, 368, 517, 933
HgaI GACGC 1 cut(s) 19
HhaI GCGC 5 cut(s) 324, 339, 856, 1110, 1332
Hin1I GRCGYC 3 cut(s) 11, 322, 378
Hin1II CATG 3 cut(s) 337, 782, 908
Hin6I GCGC 5 cut(s) 322, 337, 854, 1108, 1330
HinP1I GCGC 5 cut(s) 322, 337, 854, 1108, 1330
HincII GTYRAC 1 cut(s) 919
HindII GTYRAC 1 cut(s) 919
HindIII AAGCTT 1 cut(s) 959
HinfI GANTC 5 cut(s) 468, 590, 628, 802, 981
HpaII CCGG 5 cut(s) 270, 310, 368, 517, 933
HphI GGTGA 3 cut(s) 178, 443, 893
Hpy166II GTNNAC 3 cut(s) 224, 435, 919
Hpy188I TCNGA 9 cut(s) 72, 232, 412, 487, 598, 625, 718, 1114, 1451
Hpy188III TCNNGA 9 cut(s) 112, 213, 286, 474, 737, 739, 1219, 1291, 1314
Hpy8I GTNNAC 3 cut(s) 224, 435, 919
HpyAV CCTTC 1 cut(s) 193
HpyCH4III ACNGT 7 cut(s) 68, 208, 221, 860, 1034, 1447, 1455
HpyCH4IV ACGT 5 cut(s) 78, 306, 345, 378, 513
HpyCH4V TGCA 7 cut(s) 686, 724, 786, 949, 1003, 1339, 1407
HpyF10VI GCNNNNNNNGC 7 cut(s) 95, 104, 198, 275, 319, 1114, 1336
HpyF3I CTNAG 2 cut(s) 792, 1111
HpySE526I ACGT 5 cut(s) 78, 306, 345, 378, 513
Hsp92I GRCGYC 3 cut(s) 11, 322, 378
Hsp92II CATG 3 cut(s) 337, 782, 908
HspAI GCGC 5 cut(s) 322, 337, 854, 1108, 1330
KasI GGCGCC 1 cut(s) 321
KpnI GGTACC 2 cut(s) 748, 1391
Ksp22I TGATCA 1 cut(s) 1021
Kzo9I GATC 5 cut(s) 114, 382, 769, 1021, 1187
LmnI GCTCC 4 cut(s) 72, 197, 235, 1269
Lsp1109I GCAGC 2 cut(s) 304, 1015
LweI GCATC 1 cut(s) 883
MaeI CTAG 1 cut(s) 1392
MaeII ACGT 5 cut(s) 78, 306, 345, 378, 513
MaeIII GTNAC 5 cut(s) 62, 449, 764, 836, 1097
MalI GATC 5 cut(s) 116, 384, 771, 1023, 1189
MbiI CCGCTC 1 cut(s) 192
MboI GATC 5 cut(s) 114, 382, 769, 1021, 1187
MboII GAAGA 4 cut(s) 136, 368, 861, 1207
MflI RGATCY 1 cut(s) 1187
MhlI GDGCHC 1 cut(s) 240
MluCI AATT 4 cut(s) 687, 1157, 1286, 1344
Mly113I GGCGCC 1 cut(s) 322
MlyI GAGTC 3 cut(s) 584, 637, 975
MmeI TCCRAC 5 cut(s) 50, 576, 603, 1009, 1429
MroXI GAANNNNTTC 2 cut(s) 962, 1157
MseI TTAA 2 cut(s) 809, 1442
MslI CAYNNNNRTG 1 cut(s) 834
MspA1I CMGCKG 2 cut(s) 295, 1006
MspI CCGG 5 cut(s) 270, 310, 368, 517, 933
MspR9I CCNGG 5 cut(s) 130, 271, 326, 822, 933
Mva1269I GAATGC 1 cut(s) 1249
MvaI CCWGG 3 cut(s) 130, 326, 822
MvnI CGCG 4 cut(s) 104, 339, 424, 572
MwoI GCNNNNNNNGC 7 cut(s) 95, 104, 198, 275, 319, 1114, 1336
NarI GGCGCC 1 cut(s) 322
NciI CCSGG 2 cut(s) 271, 933
NdeII GATC 5 cut(s) 114, 382, 769, 1021, 1187
NlaIII CATG 3 cut(s) 337, 782, 908
NlaIV GGNNCC 5 cut(s) 74, 323, 746, 1389, 1468
NmeAIII GCCGAG 1 cut(s) 480
NmuCI GTSAC 4 cut(s) 449, 764, 836, 1097
NsbI TGCGCA 2 cut(s) 855, 1331
NspI RCATGY 1 cut(s) 337
PaeR7I CTCGAG 1 cut(s) 737
PcsI WCGNNNNNNNCGW 4 cut(s) 452, 531, 537, 765
PctI GAATGC 1 cut(s) 1249
PdmI GAANNNNTTC 2 cut(s) 962, 1157
PfeI GAWTC 2 cut(s) 468, 802
PflFI GACNNNGTC 1 cut(s) 1032
PflMI CCANNNNNTGG 4 cut(s) 129, 661, 700, 1377
PkrI GCNGC 8 cut(s) 106, 203, 294, 341, 396, 677, 680, 1005
Ple19I CGATCG 2 cut(s) 385, 772
PleI GAGTC 3 cut(s) 584, 636, 975
PluTI GGCGCC 1 cut(s) 325
PpsI GAGTC 3 cut(s) 584, 636, 975
Ppu21I YACGTR 1 cut(s) 79
PpuMI RGGWCCY 1 cut(s) 1466
PshAI GACNNNNGTC 1 cut(s) 732
Psp124BI GAGCTC 1 cut(s) 240
Psp5II RGGWCCY 1 cut(s) 1466
Psp6I CCWGG 3 cut(s) 128, 324, 820
PspEI GGTNACC 1 cut(s) 449
PspFI CCCAGC 1 cut(s) 577
PspGI CCWGG 3 cut(s) 128, 324, 820
PspN4I GGNNCC 5 cut(s) 74, 323, 746, 1389, 1468
PspPI GGNCC 6 cut(s) 106, 277, 387, 727, 1008, 1466
PspPPI RGGWCCY 1 cut(s) 1466
PsuI RGATCY 1 cut(s) 1187
PsyI GACNNNGTC 1 cut(s) 1032
PvuI CGATCG 2 cut(s) 385, 772
RsaI GTAC 5 cut(s) 305, 434, 587, 746, 1389
RsaNI GTAC 5 cut(s) 304, 433, 586, 745, 1388
RseI CAYNNNNRTG 1 cut(s) 834
SacI GAGCTC 1 cut(s) 240
SalI GTCGAC 1 cut(s) 917
SaqAI TTAA 2 cut(s) 809, 1442
SatI GCNGC 8 cut(s) 105, 202, 293, 340, 395, 676, 679, 1004
Sau3AI GATC 5 cut(s) 114, 382, 769, 1021, 1187
Sau96I GGNCC 6 cut(s) 106, 277, 387, 727, 1008, 1466
SchI GAGTC 3 cut(s) 584, 637, 975
ScrFI CCNGG 5 cut(s) 130, 271, 326, 822, 933
SduI GDGCHC 1 cut(s) 240
SfaNI GCATC 1 cut(s) 883
SfcI CTRYAG 1 cut(s) 879
SfoI GGCGCC 1 cut(s) 323
Sfr274I CTCGAG 1 cut(s) 737
SinI GGWCC 4 cut(s) 387, 727, 1008, 1466
SlaI CTCGAG 1 cut(s) 737
SmiMI CAYNNNNRTG 1 cut(s) 834
SmlI CTYRAG 2 cut(s) 737, 1103
SmoI CTYRAG 2 cut(s) 737, 1103
Sse9I AATT 4 cut(s) 687, 1157, 1286, 1344
SspDI GGCGCC 1 cut(s) 321
SspMI CTAG 1 cut(s) 1392
SstI GAGCTC 1 cut(s) 240
StyD4I CCNGG 5 cut(s) 128, 269, 324, 820, 931
TaaI ACNGT 7 cut(s) 68, 208, 221, 860, 1034, 1447, 1455
TaiI ACGT 5 cut(s) 81, 309, 348, 381, 516
TaqI TCGA 6 cut(s) 381, 738, 918, 1027, 1161, 1321
TaqII GACCGA 1 cut(s) 375
TasI AATT 4 cut(s) 687, 1157, 1286, 1344
TauI GCSGC 6 cut(s) 107, 204, 342, 397, 678, 681
TfiI GAWTC 2 cut(s) 468, 802
Tru1I TTAA 2 cut(s) 809, 1442
Tru9I TTAA 2 cut(s) 809, 1442
TscAI CASTG 5 cut(s) 211, 226, 737, 839, 1460
TseFI GTSAC 4 cut(s) 449, 764, 836, 1097
TseI GCWGC 2 cut(s) 292, 1003
Tsp45I GTSAC 4 cut(s) 449, 764, 836, 1097
TspDTI ATGAA 3 cut(s) 1170, 1299, 1469
TspRI CASTG 5 cut(s) 211, 226, 737, 839, 1460
Tth111I GACNNNGTC 1 cut(s) 1032
Van91I CCANNNNNTGG 4 cut(s) 129, 661, 700, 1377
VpaK11BI GGWCC 4 cut(s) 387, 727, 1008, 1466
XapI RAATTY 3 cut(s) 1157, 1286, 1344
XceI RCATGY 1 cut(s) 337
XcmI CCANNNNNNNNNTGG 1 cut(s) 1374
XhoI CTCGAG 1 cut(s) 737
XmiI GTMKAC 1 cut(s) 918
XmnI GAANNNNTTC 2 cut(s) 962, 1157
XspI CTAG 1 cut(s) 1392
ZraI GACGTC 1 cut(s) 379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.