pycom14g11910

Fringe-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
14985395 .. 14986843
1449 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g11910.2

Sequence Viewer

Length: 1017 bp
ATGACGACGTCGTCAACAATAAACCCCAACAACGCCAATCCCAGATCGCCCAAAGCTCCGCGTTACCGTCAGAGCCACGTGGGCACCGCCGTCATCGCCGTCGCGGCCCTCTTGATCTCCACCACCGCTTGGCTTTCCCTCGTCTTTTCCGCCACCCCGCACTCCCTCCCCGCCCCACAGTCCTTCACTCGCTCCCGAAACCGCACCATTTCGCGACGGGTTGGACACTCTGAGGAGCTCACTCTAAACGACATCGTTTTCGGAATTGCCGGGTCGGCCCAACTCTGGAAGCAGCGGAAGGAGTACGTCCGGCTCTGGTGGCGCCCGAACGACATGCGCGGCCACGTATGGCTGGAAGAGAAGCTACCGGAAAACGACGTCGATCGGTTGTTGCCGCCGATCATGGTCTCCGAGGACATCTCGCGGTTTCGGTACACGAACCCGACGGGTCACCCGTCGGGGCTTCGAATCTCCCGGATAATCTCCGAGTGCTTCCGCCTTGGCCTCCCCAATGTCCGGTGGTTCGTCCTAGCCGACGACGACACCATCATCAACGTCGATAACCTCGTCGCCGTGCTGGGCAAGTACGACTCGTCGGAGATGGTTTATGTGGGAAGCCCGTCGGAGAGTCACTCTGCCAACACTTATTTTAGCCACTCTATGGCGTTTGGCGGCGGCGGCATTGCAATTAGCCACCCTTTGGCGGAAGCCCTATCCGGAATGCAGGACAAGTGTCTCGAGAGGTACCCGAAGCTCTATGGAAGCGACGATCGTCTCCATGCCTGCATTACTGAGCTTGGGATTCCATTAACCAGAGAACCTGGCTTCCATCAGTATGACATTAGGGGTAATGCGCACGGTCTTTTATCTTCGCATCCTATAGCACCGTTTGTGTCCATTCACCATGTTGAAGCTGTTGACCCTTTTTATCCCGGCTTCACCTCTCTGCAAAGTTTGAAGCTTTTCACACAGGCAATGAGACTCCAACCTACCAGCTTTTTGCAGCGGTCCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

339

Amino Acids

37.76

Weight (kDa)

8.75

Isoelectric Point (pI)

48.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011882)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 10
AatII GACGTC 2 cut(s) 11, 381
Acc16I TGCGCA 1 cut(s) 855
Acc65I GGTACC 1 cut(s) 744
AccB1I GGYRCC 3 cut(s) 83, 321, 744
AccB7I CCANNNNNTGG 3 cut(s) 129, 661, 700
AccII CGCG 5 cut(s) 61, 104, 214, 339, 424
AccIII TCCGGA 1 cut(s) 716
AcoI YGGCCR 1 cut(s) 340
AcvI CACGTG 1 cut(s) 79
AcyI GRCGYC 3 cut(s) 8, 322, 378
AfaI GTAC 4 cut(s) 305, 434, 587, 746
AfiI CCNNNNNNNGG 6 cut(s) 129, 285, 516, 661, 700, 703
AgsI TTSAA 2 cut(s) 911, 958
AjnI CCWGG 1 cut(s) 820
AloI GAACNNNNNNTCC 2 cut(s) 810, 842
AluBI AGCT 8 cut(s) 56, 238, 364, 754, 796, 914, 961, 996
AluI AGCT 8 cut(s) 56, 238, 364, 754, 796, 914, 961, 996
Alw21I GWGCWC 1 cut(s) 240
Alw26I GTCTC 4 cut(s) 412, 740, 779, 973
Ama87I CYCGRG 1 cut(s) 737
Aor13HI TCCGGA 1 cut(s) 716
AoxI GGCC 4 cut(s) 105, 276, 340, 502
ApeKI GCWGC 2 cut(s) 292, 1003
ArsI GACNNNNNNTTYG 2 cut(s) 242, 274
Asp700I GAANNNNTTC 1 cut(s) 962
Asp718I GGTACC 1 cut(s) 744
AspLEI GCGC 3 cut(s) 324, 339, 856
AspS9I GGNCC 3 cut(s) 106, 277, 1008
AsuC2I CCSGG 3 cut(s) 271, 475, 933
AsuHPI GGTGA 3 cut(s) 443, 893, 931
AsuII TTCGAA 1 cut(s) 466
AvaI CYCGRG 1 cut(s) 737
AvaII GGWCC 1 cut(s) 1008
BaeGI GKGCMC 1 cut(s) 86
BanI GGYRCC 3 cut(s) 83, 321, 744
BanII GRGCYC 1 cut(s) 240
BarI GAAGNNNNNNTAC 2 cut(s) 348, 380
BbrPI CACGTG 1 cut(s) 79
Bbv12I GWGCWC 1 cut(s) 240
BbvI GCAGC 1 cut(s) 304
BccI CCATC 3 cut(s) 554, 595, 837
BceAI ACGGC 3 cut(s) 74, 83, 557
BcgI CGANNNNNNTGC 2 cut(s) 316, 350
BciT130I CCWGG 1 cut(s) 822
BcnI CCSGG 3 cut(s) 271, 475, 933
BcoDI GTCTC 4 cut(s) 412, 740, 779, 973
BfaI CTAG 1 cut(s) 530
BfmI CTRYAG 1 cut(s) 879
BfoI RGCGCY 1 cut(s) 325
BglI GCCNNNNNGGC 3 cut(s) 81, 104, 275
BisI GCNGC 8 cut(s) 105, 293, 340, 395, 673, 676, 679, 1004
BlsI GCNGC 8 cut(s) 106, 294, 341, 396, 674, 677, 680, 1005
Bme1390I CCNGG 4 cut(s) 271, 475, 822, 933
Bme18I GGWCC 1 cut(s) 1008
BmeT110I CYCGRG 1 cut(s) 737
BmgT120I GGNCC 3 cut(s) 106, 277, 1008
BmiI GGNNCC 3 cut(s) 85, 323, 746
BmrFI CCNGG 4 cut(s) 271, 475, 822, 933
BmsI GCATC 1 cut(s) 883
BoxI GACNNNNGTC 2 cut(s) 732, 771
BplI GAGNNNNNCTC 4 cut(s) 404, 436, 617, 649
Bpu14I TTCGAA 1 cut(s) 466
BpuMI CCSGG 3 cut(s) 271, 475, 933
BsaAI YACGTR 2 cut(s) 79, 346
BsaHI GRCGYC 3 cut(s) 8, 322, 378
BsaI GGTCTC 1 cut(s) 412
BsaJI CCNNGG 2 cut(s) 411, 499
BsaWI WCCGGW 3 cut(s) 367, 516, 716
Bsc4I CCNNNNNNNGG 6 cut(s) 129, 285, 516, 661, 700, 703
Bse3DI GCAATG 2 cut(s) 681, 981
BseAI TCCGGA 1 cut(s) 716
BseBI CCWGG 1 cut(s) 822
BseDI CCNNGG 2 cut(s) 411, 499
BseGI GGATG 1 cut(s) 874
BseLI CCNNNNNNNGG 6 cut(s) 129, 285, 516, 661, 700, 703
BseMI GCAATG 2 cut(s) 681, 981
BseMII CTCAG 2 cut(s) 222, 783
BseRI GAGGAG 1 cut(s) 248
BseSI GKGCMC 1 cut(s) 86
BseXI GCAGC 1 cut(s) 304
BseYI CCCAGC 1 cut(s) 577
Bsh1236I CGCG 5 cut(s) 61, 104, 214, 339, 424
Bsh1285I CGRYCG 2 cut(s) 385, 772
BshFI GGCC 4 cut(s) 107, 278, 342, 504
BshNI GGYRCC 3 cut(s) 83, 321, 744
BsiEI CGRYCG 2 cut(s) 385, 772
BsiHKAI GWGCWC 1 cut(s) 240
BsiHKCI CYCGRG 1 cut(s) 737
BsiSI CCGG 7 cut(s) 270, 310, 368, 475, 517, 717, 933
BslI CCNNNNNNNGG 6 cut(s) 129, 285, 516, 661, 700, 703
BsmAI GTCTC 4 cut(s) 412, 740, 779, 973
BsmBI CGTCTC 1 cut(s) 779
BsmI GAATGC 1 cut(s) 726
BsnI GGCC 4 cut(s) 107, 278, 342, 504
Bso31I GGTCTC 1 cut(s) 412
BsoBI CYCGRG 1 cut(s) 737
Bsp119I TTCGAA 1 cut(s) 466
Bsp1286I GDGCHC 2 cut(s) 86, 240
Bsp13I TCCGGA 1 cut(s) 716
Bsp143I GATC 5 cut(s) 44, 114, 382, 399, 769
Bsp68I TCGCGA 1 cut(s) 214
BspANI GGCC 4 cut(s) 107, 278, 342, 504
BspCNI CTCAG 2 cut(s) 223, 784
BspEI TCCGGA 1 cut(s) 716
BspFNI CGCG 5 cut(s) 61, 104, 214, 339, 424
BspLI GGNNCC 3 cut(s) 85, 323, 746
BspT104I TTCGAA 1 cut(s) 466
BspT107I GGYRCC 3 cut(s) 83, 321, 744
BspTNI GGTCTC 1 cut(s) 412
BsrDI GCAATG 2 cut(s) 681, 981
BssECI CCNNGG 2 cut(s) 411, 499
BssMI GATC 5 cut(s) 44, 114, 382, 399, 769
BssNI GRCGYC 3 cut(s) 8, 322, 378
BssT1I CCWWGG 1 cut(s) 499
Bst2UI CCWGG 1 cut(s) 822
Bst4CI ACNGT 4 cut(s) 68, 180, 860, 888
Bst6I CTCTTC 1 cut(s) 351
BstACI GRCGYC 3 cut(s) 8, 322, 378
BstBAI YACGTR 2 cut(s) 79, 346
BstBI TTCGAA 1 cut(s) 466
BstC8I GCNNGC 1 cut(s) 784
BstDEI CTNAG 2 cut(s) 231, 792
BstEII GGTNACC 1 cut(s) 449
BstF5I GGATG 1 cut(s) 874
BstFNI CGCG 5 cut(s) 61, 104, 214, 339, 424
BstH2I RGCGCY 1 cut(s) 325
BstHHI GCGC 3 cut(s) 324, 339, 856
BstKTI GATC 5 cut(s) 47, 117, 385, 402, 772
BstMAI GTCTC 4 cut(s) 412, 740, 779, 973
BstMBI GATC 5 cut(s) 44, 114, 382, 399, 769
BstMCI CGRYCG 2 cut(s) 385, 772
BstMWI GCNNNNNNNGC 6 cut(s) 81, 95, 104, 275, 319, 678
BstNI CCWGG 1 cut(s) 822
BstNSI RCATGY 1 cut(s) 337
BstPAI GACNNNNGTC 2 cut(s) 732, 771
BstPI GGTNACC 1 cut(s) 449
BstSCI CCNGG 4 cut(s) 269, 473, 820, 931
BstSFI CTRYAG 1 cut(s) 879
BstSLI GKGCMC 1 cut(s) 86
BstUI CGCG 5 cut(s) 61, 104, 214, 339, 424
BstV1I GCAGC 1 cut(s) 304
BsuRI GGCC 4 cut(s) 107, 278, 342, 504
BtgZI GCGATG 1 cut(s) 79
BtsCI GGATG 1 cut(s) 874
BtuMI TCGCGA 1 cut(s) 214
Cac8I GCNNGC 1 cut(s) 784
CfoI GCGC 3 cut(s) 324, 339, 856
Cfr13I GGNCC 3 cut(s) 106, 277, 1008
Csp6I GTAC 4 cut(s) 304, 433, 586, 745
CviAII CATG 4 cut(s) 334, 403, 779, 905
CviQI GTAC 4 cut(s) 304, 433, 586, 745
DdeI CTNAG 2 cut(s) 231, 792
DinI GGCGCC 1 cut(s) 323
DpnI GATC 5 cut(s) 46, 116, 384, 401, 771
DpnII GATC 5 cut(s) 44, 114, 382, 399, 769
DrdI GACNNNNNNGTC 1 cut(s) 10
DseDI GACNNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 1 cut(s) 340
Eam1104I CTCTTC 1 cut(s) 351
EarI CTCTTC 1 cut(s) 351
EciI GGCGGA 3 cut(s) 139, 485, 719
Ecl136II GAGCTC 1 cut(s) 238
Eco130I CCWWGG 1 cut(s) 499
Eco24I GRGCYC 1 cut(s) 240
Eco31I GGTCTC 1 cut(s) 412
Eco47I GGWCC 1 cut(s) 1008
Eco53kI GAGCTC 1 cut(s) 238
Eco72I CACGTG 1 cut(s) 79
Eco88I CYCGRG 1 cut(s) 737
Eco91I GGTNACC 1 cut(s) 449
EcoICRI GAGCTC 1 cut(s) 238
EcoO65I GGTNACC 1 cut(s) 449
EcoRII CCWGG 1 cut(s) 820
EcoT14I CCWWGG 1 cut(s) 499
EcoT38I GRGCYC 1 cut(s) 240
EgeI GGCGCC 1 cut(s) 323
EheI GGCGCC 1 cut(s) 323
ErhI CCWWGG 1 cut(s) 499
Esp3I CGTCTC 1 cut(s) 779
FaeI CATG 4 cut(s) 337, 406, 782, 908
FatI CATG 4 cut(s) 333, 402, 778, 904
FauI CCCGC 2 cut(s) 165, 178
Fnu4HI GCNGC 8 cut(s) 105, 293, 340, 395, 673, 676, 679, 1004
FokI GGATG 1 cut(s) 861
FriOI GRGCYC 1 cut(s) 240
Fsp4HI GCNGC 8 cut(s) 105, 293, 340, 395, 673, 676, 679, 1004
FspAI RTGCGCAY 1 cut(s) 855
FspBI CTAG 1 cut(s) 530
FspI TGCGCA 1 cut(s) 855
GlaI GCGC 3 cut(s) 323, 338, 855
GluI GCNGC 8 cut(s) 105, 293, 340, 395, 673, 676, 679, 1004
GsaI CCCAGC 1 cut(s) 581
HaeII RGCGCY 1 cut(s) 325
HaeIII GGCC 4 cut(s) 107, 278, 342, 504
HapII CCGG 7 cut(s) 270, 310, 368, 475, 517, 717, 933
HhaI GCGC 3 cut(s) 324, 339, 856
Hin1I GRCGYC 3 cut(s) 8, 322, 378
Hin1II CATG 4 cut(s) 337, 406, 782, 908
Hin6I GCGC 3 cut(s) 322, 337, 854
HinP1I GCGC 3 cut(s) 322, 337, 854
HincII GTYRAC 2 cut(s) 15, 919
HindII GTYRAC 2 cut(s) 15, 919
HindIII AAGCTT 1 cut(s) 959
HinfI GANTC 5 cut(s) 468, 590, 628, 802, 981
HpaII CCGG 7 cut(s) 270, 310, 368, 475, 517, 717, 933
HphI GGTGA 3 cut(s) 443, 893, 931
Hpy166II GTNNAC 3 cut(s) 15, 435, 919
Hpy188I TCNGA 7 cut(s) 72, 232, 263, 412, 487, 598, 625
Hpy188III TCNNGA 7 cut(s) 112, 195, 213, 286, 717, 737, 739
Hpy8I GTNNAC 3 cut(s) 15, 435, 919
HpyAV CCTTC 2 cut(s) 193, 292
HpyCH4III ACNGT 4 cut(s) 68, 180, 860, 888
HpyCH4IV ACGT 6 cut(s) 8, 78, 306, 345, 378, 555
HpyCH4V TGCA 5 cut(s) 686, 724, 786, 949, 1003
HpyF10VI GCNNNNNNNGC 6 cut(s) 81, 95, 104, 275, 319, 678
HpyF3I CTNAG 2 cut(s) 231, 792
HpySE526I ACGT 6 cut(s) 8, 78, 306, 345, 378, 555
Hsp92I GRCGYC 3 cut(s) 8, 322, 378
Hsp92II CATG 4 cut(s) 337, 406, 782, 908
HspAI GCGC 3 cut(s) 322, 337, 854
KasI GGCGCC 1 cut(s) 321
Kpn2I TCCGGA 1 cut(s) 716
KpnI GGTACC 1 cut(s) 748
Kzo9I GATC 5 cut(s) 44, 114, 382, 399, 769
LmnI GCTCC 3 cut(s) 61, 197, 235
Lsp1109I GCAGC 1 cut(s) 304
LweI GCATC 1 cut(s) 883
MaeI CTAG 1 cut(s) 530
MaeII ACGT 6 cut(s) 8, 78, 306, 345, 378, 555
MaeIII GTNAC 3 cut(s) 62, 449, 629
MalI GATC 5 cut(s) 46, 116, 384, 401, 771
MboI GATC 5 cut(s) 44, 114, 382, 399, 769
MboII GAAGA 2 cut(s) 368, 861
MhlI GDGCHC 2 cut(s) 86, 240
MluCI AATT 2 cut(s) 264, 687
Mly113I GGCGCC 1 cut(s) 322
MlyI GAGTC 3 cut(s) 584, 637, 975
MmeI TCCRAC 4 cut(s) 202, 576, 603, 1009
MnlI CCTC 9 cut(s) 119, 149, 176, 226, 406, 515, 575, 735, 952
MroI TCCGGA 1 cut(s) 716
MroXI GAANNNNTTC 1 cut(s) 962
MseI TTAA 1 cut(s) 809
MslI CAYNNNNRTG 1 cut(s) 834
MspA1I CMGCKG 2 cut(s) 295, 1006
MspI CCGG 7 cut(s) 270, 310, 368, 475, 517, 717, 933
MspR9I CCNGG 4 cut(s) 271, 475, 822, 933
Mva1269I GAATGC 1 cut(s) 726
MvaI CCWGG 1 cut(s) 822
MvnI CGCG 5 cut(s) 61, 104, 214, 339, 424
MwoI GCNNNNNNNGC 6 cut(s) 81, 95, 104, 275, 319, 678
NarI GGCGCC 1 cut(s) 322
NciI CCSGG 3 cut(s) 271, 475, 933
NdeII GATC 5 cut(s) 44, 114, 382, 399, 769
NlaIII CATG 4 cut(s) 337, 406, 782, 908
NlaIV GGNNCC 3 cut(s) 85, 323, 746
NmuCI GTSAC 2 cut(s) 449, 629
NruI TCGCGA 1 cut(s) 214
NsbI TGCGCA 1 cut(s) 855
NspI RCATGY 1 cut(s) 337
NspV TTCGAA 1 cut(s) 466
PaeR7I CTCGAG 1 cut(s) 737
PcsI WCGNNNNNNNCGW 3 cut(s) 452, 531, 564
PctI GAATGC 1 cut(s) 726
PdmI GAANNNNTTC 1 cut(s) 962
PfeI GAWTC 2 cut(s) 468, 802
PflFI GACNNNGTC 2 cut(s) 7, 10
PflMI CCANNNNNTGG 3 cut(s) 129, 661, 700
PfoI TCCNGGA 1 cut(s) 473
PkrI GCNGC 8 cut(s) 106, 294, 341, 396, 674, 677, 680, 1005
Ple19I CGATCG 2 cut(s) 385, 772
PleI GAGTC 3 cut(s) 584, 636, 975
PluTI GGCGCC 1 cut(s) 325
PmaCI CACGTG 1 cut(s) 79
PmlI CACGTG 1 cut(s) 79
PpsI GAGTC 3 cut(s) 584, 636, 975
Ppu21I YACGTR 2 cut(s) 79, 346
PshAI GACNNNNGTC 2 cut(s) 732, 771
Psp124BI GAGCTC 1 cut(s) 240
Psp6I CCWGG 1 cut(s) 820
PspCI CACGTG 1 cut(s) 79
PspEI GGTNACC 1 cut(s) 449
PspFI CCCAGC 1 cut(s) 577
PspGI CCWGG 1 cut(s) 820
PspN4I GGNNCC 3 cut(s) 85, 323, 746
PspPI GGNCC 3 cut(s) 106, 277, 1008
PsyI GACNNNGTC 2 cut(s) 7, 10
PvuI CGATCG 2 cut(s) 385, 772
RruI TCGCGA 1 cut(s) 214
RsaI GTAC 4 cut(s) 305, 434, 587, 746
RsaNI GTAC 4 cut(s) 304, 433, 586, 745
RseI CAYNNNNRTG 1 cut(s) 834
SacI GAGCTC 1 cut(s) 240
SaqAI TTAA 1 cut(s) 809
SatI GCNGC 8 cut(s) 105, 293, 340, 395, 673, 676, 679, 1004
Sau3AI GATC 5 cut(s) 44, 114, 382, 399, 769
Sau96I GGNCC 3 cut(s) 106, 277, 1008
SchI GAGTC 3 cut(s) 584, 637, 975
ScrFI CCNGG 4 cut(s) 271, 475, 822, 933
SduI GDGCHC 2 cut(s) 86, 240
SfaNI GCATC 1 cut(s) 883
SfcI CTRYAG 1 cut(s) 879
SfoI GGCGCC 1 cut(s) 323
Sfr274I CTCGAG 1 cut(s) 737
SfuI TTCGAA 1 cut(s) 466
SinI GGWCC 1 cut(s) 1008
SlaI CTCGAG 1 cut(s) 737
SmiMI CAYNNNNRTG 1 cut(s) 834
SmlI CTYRAG 1 cut(s) 737
SmoI CTYRAG 1 cut(s) 737
Sse9I AATT 2 cut(s) 264, 687
SspDI GGCGCC 1 cut(s) 321
SspMI CTAG 1 cut(s) 530
SstI GAGCTC 1 cut(s) 240
StyD4I CCNGG 4 cut(s) 269, 473, 820, 931
StyI CCWWGG 1 cut(s) 499
TaaI ACNGT 4 cut(s) 68, 180, 860, 888
TaiI ACGT 6 cut(s) 11, 81, 309, 348, 381, 558
TaqI TCGA 4 cut(s) 381, 466, 558, 738
TasI AATT 2 cut(s) 264, 687
TauI GCSGC 6 cut(s) 107, 342, 397, 675, 678, 681
TfiI GAWTC 2 cut(s) 468, 802
Tru1I TTAA 1 cut(s) 809
Tru9I TTAA 1 cut(s) 809
TseFI GTSAC 2 cut(s) 449, 629
TseI GCWGC 2 cut(s) 292, 1003
Tsp45I GTSAC 2 cut(s) 449, 629
Tth111I GACNNNGTC 2 cut(s) 7, 10
Van91I CCANNNNNTGG 3 cut(s) 129, 661, 700
VpaK11BI GGWCC 1 cut(s) 1008
XceI RCATGY 1 cut(s) 337
XhoI CTCGAG 1 cut(s) 737
XmnI GAANNNNTTC 1 cut(s) 962
XspI CTAG 1 cut(s) 530
ZraI GACGTC 2 cut(s) 9, 379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.