Rroxscaffold_3G00266710

Fringe-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0011882
Physical Location & Seq
Forward (+)
59908644 .. 59911308
2665 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00266710.1

Sequence Viewer

Length: 1461 bp
ATGACGACGATGTCAACCAACCCCAACACCAGTCCCAAAGACCAGACCAATTCCCGATCACCCAAAAGCCGGCGATGGCGGCAGAGCCAGGTGGCGACGGCCGTGATAGCCATAGCGGCGCTCTTGATCTCCACGGCCGCGTGGCTCTCTCTGGTGTTCTCCGGCAGTCCTCCGTCGCTCGCCGTCGCCCGCTTGCAGAACAAGGCACCGGCTCCGTCTTTTGCTCAGTACCGAAACGACAGCGTTGCGGTTTCCGAAGACGAAGAGTGGAGCGACGAGGAAGAGCTGAGCCTAGACGACGTCGTTTTCGGGATTGCCGGGTCGTCCGGGCTCTGGAAGCAGCGGAAGGAGTACGTCAGGCTGTGGTGGCGTCCGGACGACATGCGCGGCCACGTCTGGATGGACGAGAAAGTCCCTGAAGAAGAAAACGACGAGTCGTTGCCTCCGATCATGGTGTCCGAGGACATCTCGAGGTTCCGGTACACAAACCCGACGGGTCACCCGTCGGGGCTCCGAATATCCCGCATAATTTCCGAGTGCTTCCGCCTCCTCCTGCCCAAAGTCCGGTGGTTCGTGCTGGCGGACGACGACACCATCATCAACGCCGATAACCTGGTCGCAGTTCTGAGCAAATACGACGCGTCGGAGATGGTTTATGTGGGGAGTCCATCGGAGAGTCACTCTGCCAATACTTATTTCAGTCATTCCATGGCTTTTGGGGGTGGGGGTATTGCGATTAGCTATCCTCTGGCGAAAGCTCTCTCTGAAATTCAAGATGAGTGTCTCGAGAGGTACCCGAAACTCTATGGAAGCGATGATCGACTCCATGCCTGCATTACTGAGCTTGGGGTTCCTTTAAGTAGAGAGCCCGGCTTTCACCAGTACGATATCAGAGGTAATGCACACGGTCTTCTATCTTCTCATCCGATAGCACCGTTTGTGTCGATTCACCATGTTGAAGCTGTGGATCCTTTTTATCCTGGCTTAAACTCTCTACAAAGTTTGAAGCTGTTTACGCATGCTATGAGACTCCAACCCAGCAGCTTTTTGCAGCGATCCATTTGTTATGATCGCCGATACCATCTCACATTTTCGGTTTCTCTTGGTTATGCGGTCCAAGTCTTCCCACAAATCGTGCTTCCTCGTGACCTCGAGCGATCAGAGCAGACTTACTCTGCTTGGAATGGAATCACCAGGAGGAATGAATTTGATATGGACACCAAAGACGCGTACAGGTCTGTTTGTAAGAAGCCCATTCTGTTCTTCTTGAAAGATATTAGGTCACAGGGTAATGCTACTTTGGGTTCATATATGAGGAGTAGAGCAAAAGATGATTTCAAAAGAACAGTTCTATGCTTTCCCGATCCCGGCATTTGCGCCGTCTGCGAAAAATTCAGGTTTTGGGTCATCCACTCACCAAGAAATGGCATTTGGTACCGCGCCGGCTATGTTGCCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF604

Protein Analysis

486

Amino Acids

55.01

Weight (kDa)

6.68

Isoelectric Point (pI)

57.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fringe PF02434 184 - 294 1.3e-17 Fringe-like
DUF604 PF04646 230 - 444 1.5e-94 Protein of unknown function, DUF604
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011882)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33250
fragaria_vesca FvH4_5g10130
malus_domestica MD06G1127900.v1.1 MD14G1143700.v1.1
prunus_persica Prupe.5G137700_v2.0.a1 Prupe.5G137700_v2.0.a1
pyrus_communis pycom06g11820 pycom14g11910
rosa_chinensis RchiOBHm_Chr7g0188171
rosa_laevigata RLG00000004722
rosa_multiflora Rmu_sc0004001.1_g000001
rosa_roxburghii Rroxscaffold_3G00266710
rosa_rugosa Rorug06G0488800 Rorug06G0488900.1
rosa_samantha Rh7AG093000 Rh7BG094600 Rh7CG094300 Rh7DG095000
rosa_wichuraiana Rw7G008030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 10, 410
AatII GACGTC 1 cut(s) 303
Acc65I GGTACC 2 cut(s) 792, 1434
AccB1I GGYRCC 3 cut(s) 205, 792, 1434
AccB7I CCANNNNNTGG 1 cut(s) 1424
AccII CGCG 5 cut(s) 140, 387, 641, 1229, 1440
AccIII TCCGGA 1 cut(s) 373
AclWI GGATC 4 cut(s) 962, 975, 1050, 1358
AcoI YGGCCR 3 cut(s) 99, 135, 388
AcsI RAATTY 3 cut(s) 768, 1205, 1391
AcuI CTGAAG 1 cut(s) 438
AcyI GRCGYC 2 cut(s) 300, 370
AfaI GTAC 7 cut(s) 230, 353, 482, 794, 884, 1232, 1436
AfiI CCNNNNNNNGG 5 cut(s) 69, 333, 564, 1367, 1424
AflIII ACRYGT 2 cut(s) 639, 1227
AgsI TTSAA 5 cut(s) 773, 959, 1006, 1270, 1339
AjiI CACGTC 1 cut(s) 394
AjnI CCWGG 4 cut(s) 87, 612, 979, 1193
AjuI GAANNNNNNNTTGG 4 cut(s) 680, 712, 1414, 1446
AluBI AGCT 7 cut(s) 286, 741, 758, 844, 962, 1009, 1044
AluI AGCT 7 cut(s) 286, 741, 758, 844, 962, 1009, 1044
Alw26I GTCTC 2 cut(s) 788, 1021
AlwI GGATC 4 cut(s) 962, 975, 1050, 1358
Ama87I CYCGRG 3 cut(s) 469, 785, 1151
Aor13HI TCCGGA 1 cut(s) 373
AoxI GGCC 3 cut(s) 99, 135, 388
ApeKI GCWGC 3 cut(s) 340, 1041, 1051
ApoI RAATTY 3 cut(s) 768, 1205, 1391
ArsI GACNNNNNNTTYG 2 cut(s) 290, 322
Asp718I GGTACC 2 cut(s) 792, 1434
AspLEI GCGC 4 cut(s) 121, 387, 1379, 1442
AspS9I GGNCC 1 cut(s) 1114
AsuC2I CCSGG 4 cut(s) 319, 328, 870, 1368
AsuHPI GGTGA 6 cut(s) 51, 491, 869, 941, 1183, 1407
AvaI CYCGRG 3 cut(s) 469, 785, 1151
AvaII GGWCC 1 cut(s) 1114
BamHI GGATCC 1 cut(s) 967
BanI GGYRCC 3 cut(s) 205, 792, 1434
BanII GRGCYC 3 cut(s) 333, 513, 870
BauI CACGAG 1 cut(s) 1143
BbsI GAAGAC 3 cut(s) 264, 902, 1114
BbvI GCAGC 3 cut(s) 352, 1053, 1063
BccI CCATC 6 cut(s) 69, 394, 602, 643, 676, 1089
BceAI ACGGC 5 cut(s) 86, 114, 150, 167, 1364
BcgI CGANNNNNNTGC 2 cut(s) 227, 261
BciT130I CCWGG 4 cut(s) 89, 614, 981, 1195
BcnI CCSGG 4 cut(s) 319, 328, 870, 1368
BcoDI GTCTC 2 cut(s) 788, 1021
BfaI CTAG 1 cut(s) 293
BfoI RGCGCY 1 cut(s) 122
BglI GCCNNNNNGGC 1 cut(s) 116
BisI GCNGC 7 cut(s) 80, 117, 138, 341, 388, 1042, 1052
BlpI GCTNAGC 1 cut(s) 287
BlsI GCNGC 7 cut(s) 81, 118, 139, 342, 389, 1043, 1053
Bme1390I CCNGG 8 cut(s) 89, 319, 328, 614, 870, 981, 1195, 1368
Bme18I GGWCC 1 cut(s) 1114
BmeT110I CYCGRG 3 cut(s) 469, 785, 1151
BmgBI CACGTC 1 cut(s) 394
BmgT120I GGNCC 1 cut(s) 1114
BmiI GGNNCC 8 cut(s) 207, 213, 476, 512, 794, 852, 969, 1436
BmrFI CCNGG 8 cut(s) 89, 319, 328, 614, 870, 981, 1195, 1368
BpiI GAAGAC 3 cut(s) 264, 902, 1114
BplI GAGNNNNNCTC 4 cut(s) 452, 484, 665, 697
Bpu1102I GCTNAGC 1 cut(s) 287
BpuMI CCSGG 4 cut(s) 319, 328, 870, 1368
BsaHI GRCGYC 2 cut(s) 300, 370
BsaJI CCNNGG 3 cut(s) 132, 459, 708
BsaWI WCCGGW 3 cut(s) 373, 477, 564
Bsc4I CCNNNNNNNGG 5 cut(s) 69, 333, 564, 1367, 1424
Bse118I RCCGGY 3 cut(s) 69, 208, 1442
Bse1I ACTGG 2 cut(s) 30, 880
BseAI TCCGGA 1 cut(s) 373
BseBI CCWGG 4 cut(s) 89, 614, 981, 1195
BseDI CCNNGG 3 cut(s) 132, 459, 708
BseGI GGATG 3 cut(s) 405, 922, 1407
BseLI CCNNNNNNNGG 5 cut(s) 69, 333, 564, 1367, 1424
BseMII CTCAG 4 cut(s) 239, 278, 617, 831
BseNI ACTGG 2 cut(s) 30, 880
BseRI GAGGAG 2 cut(s) 539, 1330
BseX3I CGGCCG 2 cut(s) 99, 135
BseXI GCAGC 3 cut(s) 352, 1053, 1063
BseYI CCCAGC 1 cut(s) 1037
Bsh1236I CGCG 5 cut(s) 140, 387, 641, 1229, 1440
Bsh1285I CGRYCG 2 cut(s) 102, 138
BshFI GGCC 3 cut(s) 101, 137, 390
BshNI GGYRCC 3 cut(s) 205, 792, 1434
BsiEI CGRYCG 2 cut(s) 102, 138
BsiHKCI CYCGRG 3 cut(s) 469, 785, 1151
BslFI GGGAC 2 cut(s) 18, 398
BslI CCNNNNNNNGG 5 cut(s) 69, 333, 564, 1367, 1424
BsmAI GTCTC 2 cut(s) 788, 1021
BsmFI GGGAC 2 cut(s) 18, 398
BsnI GGCC 3 cut(s) 101, 137, 390
BsoBI CYCGRG 3 cut(s) 469, 785, 1151
Bsp1286I GDGCHC 3 cut(s) 333, 513, 870
Bsp13I TCCGGA 1 cut(s) 373
Bsp143I GATC 9 cut(s) 56, 126, 447, 817, 967, 1055, 1069, 1157, 1363
Bsp1720I GCTNAGC 1 cut(s) 287
Bsp19I CCATGG 1 cut(s) 708
BspANI GGCC 3 cut(s) 101, 137, 390
BspCNI CTCAG 4 cut(s) 238, 279, 618, 832
BspEI TCCGGA 1 cut(s) 373
BspFNI CGCG 5 cut(s) 140, 387, 641, 1229, 1440
BspLI GGNNCC 8 cut(s) 207, 213, 476, 512, 794, 852, 969, 1436
BspPI GGATC 4 cut(s) 962, 975, 1050, 1358
BspQI GCTCTTC 1 cut(s) 276
BspT107I GGYRCC 3 cut(s) 205, 792, 1434
BsrFI RCCGGY 3 cut(s) 69, 208, 1442
BsrI ACTGG 2 cut(s) 30, 880
BssAI RCCGGY 3 cut(s) 69, 208, 1442
BssECI CCNNGG 3 cut(s) 132, 459, 708
BssMI GATC 9 cut(s) 56, 126, 447, 817, 967, 1055, 1069, 1157, 1363
BssNI GRCGYC 2 cut(s) 300, 370
BssSI CACGAG 1 cut(s) 1143
BssT1I CCWWGG 1 cut(s) 708
Bst2BI CACGAG 1 cut(s) 1143
Bst2UI CCWGG 4 cut(s) 89, 614, 981, 1195
Bst4CI ACNGT 3 cut(s) 908, 936, 1348
Bst6I CTCTTC 2 cut(s) 258, 276
BstACI GRCGYC 2 cut(s) 300, 370
BstC8I GCNNGC 8 cut(s) 71, 180, 190, 194, 579, 832, 1020, 1444
BstDEI CTNAG 4 cut(s) 225, 287, 626, 840
BstDSI CCRYGG 2 cut(s) 132, 708
BstEII GGTNACC 1 cut(s) 497
BstF5I GGATG 3 cut(s) 405, 922, 1407
BstFNI CGCG 5 cut(s) 140, 387, 641, 1229, 1440
BstH2I RGCGCY 1 cut(s) 122
BstHHI GCGC 4 cut(s) 121, 387, 1379, 1442
BstKTI GATC 9 cut(s) 59, 129, 450, 820, 970, 1058, 1072, 1160, 1366
BstMAI GTCTC 2 cut(s) 788, 1021
BstMBI GATC 9 cut(s) 56, 126, 447, 817, 967, 1055, 1069, 1157, 1363
BstMCI CGRYCG 2 cut(s) 102, 138
BstMWI GCNNNNNNNGC 8 cut(s) 79, 107, 116, 337, 367, 1015, 1162, 1383
BstNI CCWGG 4 cut(s) 89, 614, 981, 1195
BstNSI RCATGY 2 cut(s) 385, 1022
BstPI GGTNACC 1 cut(s) 497
BstSCI CCNGG 8 cut(s) 87, 317, 326, 612, 868, 979, 1193, 1366
BstUI CGCG 5 cut(s) 140, 387, 641, 1229, 1440
BstV1I GCAGC 3 cut(s) 352, 1053, 1063
BstV2I GAAGAC 3 cut(s) 264, 902, 1114
BstX2I RGATCY 1 cut(s) 967
BstYI RGATCY 1 cut(s) 967
BstZI CGGCCG 2 cut(s) 99, 135
BsuRI GGCC 3 cut(s) 101, 137, 390
BtgI CCRYGG 2 cut(s) 132, 708
BtgZI GCGATG 2 cut(s) 88, 828
BtrI CACGTC 1 cut(s) 394
BtsCI GGATG 3 cut(s) 405, 922, 1407
Cac8I GCNNGC 8 cut(s) 71, 180, 190, 194, 579, 832, 1020, 1444
CfoI GCGC 4 cut(s) 121, 387, 1379, 1442
Cfr10I RCCGGY 3 cut(s) 69, 208, 1442
Cfr13I GGNCC 1 cut(s) 1114
CseI GACGC 4 cut(s) 359, 630, 647, 1235
CsiI ACCWGGT 1 cut(s) 612
Csp6I GTAC 7 cut(s) 229, 352, 481, 793, 883, 1231, 1435
CviAII CATG 6 cut(s) 382, 451, 709, 827, 953, 1019
CviQI GTAC 7 cut(s) 229, 352, 481, 793, 883, 1231, 1435
DdeI CTNAG 4 cut(s) 225, 287, 626, 840
DpnI GATC 9 cut(s) 58, 128, 449, 819, 969, 1057, 1071, 1159, 1365
DpnII GATC 9 cut(s) 56, 126, 447, 817, 967, 1055, 1069, 1157, 1363
DrdI GACNNNNNNGTC 2 cut(s) 10, 410
DseDI GACNNNNNNGTC 2 cut(s) 10, 410
EaeI YGGCCR 3 cut(s) 99, 135, 388
EagI CGGCCG 2 cut(s) 99, 135
Eam1104I CTCTTC 2 cut(s) 258, 276
EarI CTCTTC 2 cut(s) 258, 276
EciI GGCGGA 2 cut(s) 533, 596
EclXI CGGCCG 2 cut(s) 99, 135
Eco130I CCWWGG 1 cut(s) 708
Eco24I GRGCYC 3 cut(s) 333, 513, 870
Eco32I GATATC 1 cut(s) 889
Eco47I GGWCC 1 cut(s) 1114
Eco52I CGGCCG 2 cut(s) 99, 135
Eco57I CTGAAG 1 cut(s) 438
Eco88I CYCGRG 3 cut(s) 469, 785, 1151
Eco91I GGTNACC 1 cut(s) 497
EcoO65I GGTNACC 1 cut(s) 497
EcoRII CCWGG 4 cut(s) 87, 612, 979, 1193
EcoRV GATATC 1 cut(s) 889
EcoT14I CCWWGG 1 cut(s) 708
EcoT38I GRGCYC 3 cut(s) 333, 513, 870
ErhI CCWWGG 1 cut(s) 708
FaeI CATG 6 cut(s) 385, 454, 712, 830, 956, 1022
FaqI GGGAC 2 cut(s) 18, 398
FatI CATG 6 cut(s) 381, 450, 708, 826, 952, 1018
FauI CCCGC 2 cut(s) 197, 530
Fnu4HI GCNGC 7 cut(s) 80, 117, 138, 341, 388, 1042, 1052
FokI GGATG 3 cut(s) 412, 909, 1394
FriOI GRGCYC 3 cut(s) 333, 513, 870
Fsp4HI GCNGC 7 cut(s) 80, 117, 138, 341, 388, 1042, 1052
FspBI CTAG 1 cut(s) 293
GlaI GCGC 4 cut(s) 120, 386, 1378, 1441
GluI GCNGC 7 cut(s) 80, 117, 138, 341, 388, 1042, 1052
GsaI CCCAGC 1 cut(s) 1041
HaeII RGCGCY 1 cut(s) 122
HaeIII GGCC 3 cut(s) 101, 137, 390
HgaI GACGC 4 cut(s) 359, 630, 647, 1235
HhaI GCGC 4 cut(s) 121, 387, 1379, 1442
Hin1I GRCGYC 2 cut(s) 300, 370
Hin1II CATG 6 cut(s) 385, 454, 712, 830, 956, 1022
Hin6I GCGC 4 cut(s) 119, 385, 1377, 1440
HinP1I GCGC 4 cut(s) 119, 385, 1377, 1440
HincII GTYRAC 1 cut(s) 15
HindII GTYRAC 1 cut(s) 15
HinfI GANTC 7 cut(s) 434, 664, 676, 822, 946, 1029, 1188
HphI GGTGA 6 cut(s) 51, 491, 869, 941, 1183, 1407
Hpy166II GTNNAC 3 cut(s) 15, 483, 1014
Hpy8I GTNNAC 3 cut(s) 15, 483, 1014
HpyAV CCTTC 1 cut(s) 340
HpyCH4III ACNGT 3 cut(s) 908, 936, 1348
HpyCH4IV ACGT 3 cut(s) 300, 354, 393
HpyCH4V TGCA 4 cut(s) 196, 834, 902, 1051
HpyF10VI GCNNNNNNNGC 8 cut(s) 79, 107, 116, 337, 367, 1015, 1162, 1383
HpyF3I CTNAG 4 cut(s) 225, 287, 626, 840
HpySE526I ACGT 3 cut(s) 300, 354, 393
Hsp92I GRCGYC 2 cut(s) 300, 370
Hsp92II CATG 6 cut(s) 385, 454, 712, 830, 956, 1022
HspAI GCGC 4 cut(s) 119, 385, 1377, 1440
Kpn2I TCCGGA 1 cut(s) 373
KpnI GGTACC 2 cut(s) 796, 1438
KroI GCCGGC 2 cut(s) 69, 1442
KroNI GCCGGC 2 cut(s) 71, 1444
Kzo9I GATC 9 cut(s) 56, 126, 447, 817, 967, 1055, 1069, 1157, 1363
LguI GCTCTTC 1 cut(s) 276
LmnI GCTCC 3 cut(s) 217, 270, 516
Lsp1109I GCAGC 3 cut(s) 352, 1053, 1063
MabI ACCWGGT 1 cut(s) 612
MaeI CTAG 1 cut(s) 293
MaeII ACGT 3 cut(s) 300, 354, 393
MaeIII GTNAC 4 cut(s) 497, 677, 1145, 1281
MalI GATC 9 cut(s) 58, 128, 449, 819, 969, 1057, 1071, 1159, 1365
MboI GATC 9 cut(s) 56, 126, 447, 817, 967, 1055, 1069, 1157, 1363
MboII GAAGA 9 cut(s) 269, 275, 293, 431, 434, 902, 909, 1114, 1255
MflI RGATCY 1 cut(s) 967
MhlI GDGCHC 3 cut(s) 333, 513, 870
MluCI AATT 5 cut(s) 49, 528, 768, 1205, 1391
MluI ACGCGT 2 cut(s) 639, 1227
MlyI GAGTC 5 cut(s) 443, 673, 685, 816, 1023
MmeI TCCRAC 2 cut(s) 624, 1057
MroI TCCGGA 1 cut(s) 373
MroNI GCCGGC 2 cut(s) 69, 1442
MseI TTAA 2 cut(s) 857, 986
MspA1I CMGCKG 1 cut(s) 343
MspR9I CCNGG 8 cut(s) 89, 319, 328, 614, 870, 981, 1195, 1368
MvaI CCWGG 4 cut(s) 89, 614, 981, 1195
MvnI CGCG 5 cut(s) 140, 387, 641, 1229, 1440
MwoI GCNNNNNNNGC 8 cut(s) 79, 107, 116, 337, 367, 1015, 1162, 1383
NaeI GCCGGC 2 cut(s) 71, 1444
NciI CCSGG 4 cut(s) 319, 328, 870, 1368
NcoI CCATGG 1 cut(s) 708
NdeII GATC 9 cut(s) 56, 126, 447, 817, 967, 1055, 1069, 1157, 1363
NgoMIV GCCGGC 2 cut(s) 69, 1442
NlaIII CATG 6 cut(s) 385, 454, 712, 830, 956, 1022
NlaIV GGNNCC 8 cut(s) 207, 213, 476, 512, 794, 852, 969, 1436
NmuCI GTSAC 4 cut(s) 497, 677, 1145, 1281
NspI RCATGY 2 cut(s) 385, 1022
PaeI GCATGC 1 cut(s) 1022
PaeR7I CTCGAG 3 cut(s) 469, 785, 1151
PciSI GCTCTTC 1 cut(s) 276
PcsI WCGNNNNNNNCGW 2 cut(s) 443, 500
PdiI GCCGGC 2 cut(s) 71, 1444
PfeI GAWTC 2 cut(s) 946, 1188
PflFI GACNNNGTC 2 cut(s) 10, 299
PflMI CCANNNNNTGG 1 cut(s) 1424
PkrI GCNGC 7 cut(s) 81, 118, 139, 342, 389, 1043, 1053
PleI GAGTC 5 cut(s) 442, 672, 684, 816, 1023
PpsI GAGTC 5 cut(s) 442, 672, 684, 816, 1023
Psp6I CCWGG 4 cut(s) 87, 612, 979, 1193
PspEI GGTNACC 1 cut(s) 497
PspFI CCCAGC 1 cut(s) 1037
PspGI CCWGG 4 cut(s) 87, 612, 979, 1193
PspN4I GGNNCC 8 cut(s) 207, 213, 476, 512, 794, 852, 969, 1436
PspPI GGNCC 1 cut(s) 1114
PspXI VCTCGAGB 1 cut(s) 1151
PsuI RGATCY 1 cut(s) 967
PsyI GACNNNGTC 2 cut(s) 10, 299
RsaI GTAC 7 cut(s) 230, 353, 482, 794, 884, 1232, 1436
RsaNI GTAC 7 cut(s) 229, 352, 481, 793, 883, 1231, 1435
SapI GCTCTTC 1 cut(s) 276
SaqAI TTAA 2 cut(s) 857, 986
SatI GCNGC 7 cut(s) 80, 117, 138, 341, 388, 1042, 1052
Sau3AI GATC 9 cut(s) 56, 126, 447, 817, 967, 1055, 1069, 1157, 1363
Sau96I GGNCC 1 cut(s) 1114
SchI GAGTC 5 cut(s) 443, 673, 685, 816, 1023
ScrFI CCNGG 8 cut(s) 89, 319, 328, 614, 870, 981, 1195, 1368
SduI GDGCHC 3 cut(s) 333, 513, 870
SexAI ACCWGGT 1 cut(s) 612
Sfr274I CTCGAG 3 cut(s) 469, 785, 1151
SinI GGWCC 1 cut(s) 1114
SlaI CTCGAG 3 cut(s) 469, 785, 1151
SmlI CTYRAG 3 cut(s) 469, 785, 1151
SmoI CTYRAG 3 cut(s) 469, 785, 1151
SphI GCATGC 1 cut(s) 1022
Sse9I AATT 5 cut(s) 49, 528, 768, 1205, 1391
SspMI CTAG 1 cut(s) 293
StyD4I CCNGG 8 cut(s) 87, 317, 326, 612, 868, 979, 1193, 1366
StyI CCWWGG 1 cut(s) 708
TaaI ACNGT 3 cut(s) 908, 936, 1348
TaiI ACGT 3 cut(s) 303, 357, 396
TaqI TCGA 5 cut(s) 470, 786, 820, 944, 1152
TasI AATT 5 cut(s) 49, 528, 768, 1205, 1391
TauI GCSGC 4 cut(s) 82, 119, 140, 390
TfiI GAWTC 2 cut(s) 946, 1188
Tru1I TTAA 2 cut(s) 857, 986
Tru9I TTAA 2 cut(s) 857, 986
TseFI GTSAC 4 cut(s) 497, 677, 1145, 1281
TseI GCWGC 3 cut(s) 340, 1041, 1051
Tsp45I GTSAC 4 cut(s) 497, 677, 1145, 1281
TspDTI ATGAA 2 cut(s) 1218, 1296
TspGWI ACGGA 2 cut(s) 162, 204
Tth111I GACNNNGTC 2 cut(s) 10, 299
Van91I CCANNNNNTGG 1 cut(s) 1424
VpaK11BI GGWCC 1 cut(s) 1114
XapI RAATTY 3 cut(s) 768, 1205, 1391
XceI RCATGY 2 cut(s) 385, 1022
XhoI CTCGAG 3 cut(s) 469, 785, 1151
XspI CTAG 1 cut(s) 293
ZraI GACGTC 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.