Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0011111

Physical Location & Seq

Genomic Coordinates Reverse (-)

28191907 .. 28194926

Gene Structure 3020 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1136900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGGCGAACACAATCCCCGGGGCAGCCGTCGGGCTTTCCTGCTCGACTCCGAAGCTCTCTCAGAGACCCACCTCGCGGTTTTCGCAATCGTCCCGGCGGTTCTGCACCGTCAAGATGGCCGTCTCCCTCGATGAGAAGAAGAGTTTCACTCTCGAAAAATCCGAGCAGGCTTTCAATGTCGCCAAGGAGTTGATGCCTGGAGGTGTGAATTCCCCTGTTCGGGCTTTTAAGTCTGTTGGTGGACAACCTATTGTGATGGATTCTGTTAAGGGATCTCACATGTGGGACATAGATGGAAATGAGTACATCGACTATGTGGGATCGTGGGGACCTGCTATAATCGGGCATGCAGATGATGAGGTACTTGCAGCTCTGGCTGAAACGATGAAGAAGGGAACTAGCTTTGGTGCACCTTGTCTTCTAGAGAATGTTCTGGCAGAAACTGTGATCGCGGCTGTTCCAAGCATTGAAATGGTTCGATTTGTGAACTCAGGTACAGAAGCATGCATGGGTGTGCTCCGCTTGGCCCGTGCATACACCGGCCGACCGAAGATCATTAAGTTCGAGGGCTGTTACCATGGTCATGCTGATCCATTCCTTGTCAAGGCTGGTAGTGGAGTGGCCACGCTAGGACTTCCAGACTCACCTGGTGTTCCGAAGGCAGCCACTTTTGATACTCTAACAGCCCCCTACAATGACTTGCCGGCTGTGGAAGCTCTCTTTGAAAATCACAAAGGAGAAATTGCTGGAGTCATCCTTGAACCCGTTGTTGGGAACTCTGGCTTCATTACTCCCAAATCTGATTTCCTTAATGGTATCCGCAAGCTCACCAAAGAAAATGATAGTCTTCTCATATTTGATGAAGTGATGACTGGATTCCGTTTGTCTTACGGTGGAGCACAGGAGTATTTTGGCATTACTCCTGATTTAACAACACTCGGGAAAATCATTGGTGGTGGACTGCCAGTCGGTGCATATGGTGGACGGAGGGAGATTATGGAAATGGTGGCACCAGCAGGACCGATGTACCAAGCCGGGACTCTGAGTGGAAATCCATTAGCAATGACTGCGGGGATTCATACCCTTAAGAGGTTGAGGGAGCCAGGAAGTTATGAATACCTGGATAAGATCACGGGTGAACTCATTCAAGGTATCATAGATGCCGGGAAGAGGGCTGGGCATGCAATGTGTGGTGGGTACATAAGTGGCATGTTCGGGTTTTTCTTCACTGAAGGGCCTGTGTACAACTTTGAGGACGCGAAAAAGAGTGACACCGCAAAGTTTGCAAAGTTTTATAGGGGACTGCTGGAGGAAGGTGTATACCTTGCTCCGTCACAGTTTGAGGCTGGGTTTACAAGCTTGGCGCATACTACGGAGGACATCCAAAACACGATAGCTGCTGCTGATAGAGTTTTGAGGCAGATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048046

KEGG Pathways

Metabolic & Signaling

ko00860 ko01100 ko01110 ko01120 map00860 map01100 map01110 map01120

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

476

Amino Acids

50.76

Weight (kDa)

5.85

Isoelectric Point (pI)

34.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_3	PF00202	83 - 391	1.8e-68	Aminotransferase class-III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48730 AT5G63570 AT5G63570
fragaria_vesca	FvH4_5g08950 FvH4_5g08950
malus_domestica	MD06G1136900.v1.1 MD14G1151700.v1.1
prunus_persica	Prupe.5G146800_v2.0.a1 Prupe.5G146800_v2.0.a1
pyrus_communis	pycom06g12820
rosa_chinensis	RchiOBHm_Chr7g0189421
rosa_laevigata	RLG00000003783 RLG00000004612
rosa_multiflora	Rmu_sc0001282.1_g000016
rosa_roxburghii	Rroxscaffold_3G00256580 Rroxscaffold_3G00265490
rosa_rugosa	Rorug06G0497700
rosa_samantha	Rh7BG105200 Rh7DG104600
rosa_wichuraiana	Rw7G008870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	340
AccB1I	GGYRCC	1 cut(s)	1009
AccI	GTMKAC	1 cut(s)	1320
AccII	CGCG	3 cut(s)	76, 452, 1259
AciI	CCGC	7 cut(s)	76, 97, 452, 520, 820, 1070, 1275
AclWI	GGATC	3 cut(s)	280, 328, 584
AcoI	YGGCCR	3 cut(s)	117, 541, 621
AcsI	RAATTY	1 cut(s)	208
AcuI	CTGAAG	1 cut(s)	1251
AdeI	CACNNNGTG	1 cut(s)	650
AfaI	GTAC	6 cut(s)	305, 363, 496, 1028, 1199, 1244
AfiI	CCNNNNNNNGG	8 cut(s)	75, 219, 220, 604, 770, 771, 1089, 1170
AflII	CTTAAG	1 cut(s)	1085
AflIII	ACRYGT	1 cut(s)	279
AgsI	TTSAA	5 cut(s)	175, 470, 725, 761, 1148
AhdI	GACNNNNNGTC	1 cut(s)	965
AjnI	CCWGG	4 cut(s)	196, 646, 1102, 1119
AjuI	GAANNNNNNNTTGG	4 cut(s)	753, 785, 788, 820
AluBI	AGCT	7 cut(s)	55, 371, 402, 716, 826, 1359, 1397
AluI	AGCT	7 cut(s)	55, 371, 402, 716, 826, 1359, 1397
Alw21I	GWGCWC	3 cut(s)	412, 519, 901
Alw26I	GTCTC	2 cut(s)	58, 127
Alw44I	GTGCAC	1 cut(s)	408
AlwI	GGATC	3 cut(s)	280, 328, 584
AlwNI	CAGNNNCTG	1 cut(s)	443
Ama87I	CYCGRG	2 cut(s)	17, 938
AoxI	GGCC	5 cut(s)	117, 525, 541, 621, 1235
ApaLI	GTGCAC	1 cut(s)	408
ApeKI	GCWGC	5 cut(s)	23, 368, 662, 1397, 1400
ApoI	RAATTY	1 cut(s)	208
Asp700I	GAANNNNTTC	3 cut(s)	143, 474, 1143
AspLEI	GCGC	1 cut(s)	1366
AspS9I	GGNCC	4 cut(s)	329, 526, 1019, 1235
AsuC2I	CCSGG	5 cut(s)	18, 19, 94, 1036, 1165
AsuHPI	GGTGA	3 cut(s)	636, 820, 1148
AvaI	CYCGRG	2 cut(s)	17, 938
AvaII	GGWCC	2 cut(s)	329, 1019
BaeGI	GKGCMC	1 cut(s)	412
BaeI	ACNNNNGTAYC	4 cut(s)	1010, 1043, 1189, 1222
BalI	TGGCCA	1 cut(s)	623
BanI	GGYRCC	1 cut(s)	1009
BbsI	GAAGAC	2 cut(s)	410, 839
Bbv12I	GWGCWC	3 cut(s)	412, 519, 901
BbvI	GCAGC	5 cut(s)	35, 380, 674, 1384, 1387
BccI	CCATC	3 cut(s)	109, 250, 287
BceAI	ACGGC	2 cut(s)	11, 104
BciT130I	CCWGG	4 cut(s)	198, 648, 1104, 1121
BciVI	GTATCC	1 cut(s)	827
BcnI	CCSGG	5 cut(s)	18, 19, 94, 1036, 1165
BcoDI	GTCTC	2 cut(s)	58, 127
BfaI	CTAG	3 cut(s)	399, 422, 629
BfrI	CTTAAG	1 cut(s)	1085
BfuAI	ACCTGC	1 cut(s)	340
BfuI	GTATCC	1 cut(s)	827
BisI	GCNGC	6 cut(s)	24, 369, 453, 663, 1398, 1401
BlsI	GCNGC	6 cut(s)	25, 370, 454, 664, 1399, 1402
Bme1390I	CCNGG	9 cut(s)	18, 19, 94, 198, 648, 1036, 1104, 1121, 1165
Bme18I	GGWCC	2 cut(s)	329, 1019
BmeRI	GACNNNNNGTC	1 cut(s)	965
BmeT110I	CYCGRG	2 cut(s)	17, 938
BmgT120I	GGNCC	4 cut(s)	329, 526, 1019, 1235
BmiI	GGNNCC	3 cut(s)	330, 1011, 1101
BmrFI	CCNGG	9 cut(s)	18, 19, 94, 198, 648, 1036, 1104, 1121, 1165
BmsI	GCATC	2 cut(s)	183, 1150
BpiI	GAAGAC	2 cut(s)	410, 839
BplI	GAGNNNNNCTC	2 cut(s)	133, 165
BpmI	CTGGAG	3 cut(s)	219, 768, 1328
BpuMI	CCSGG	5 cut(s)	18, 19, 94, 1036, 1165
BsaI	GGTCTC	1 cut(s)	58
BsaJI	CCNNGG	5 cut(s)	16, 17, 18, 183, 577
Bsc4I	CCNNNNNNNGG	8 cut(s)	75, 219, 220, 604, 770, 771, 1089, 1170
Bse118I	RCCGGY	2 cut(s)	539, 703
Bse1I	ACTGG	2 cut(s)	877, 965
Bse3DI	GCAATG	2 cut(s)	1068, 1191
BseBI	CCWGG	4 cut(s)	198, 648, 1104, 1121
BseDI	CCNNGG	5 cut(s)	16, 17, 18, 183, 577
BseGI	GGATG	2 cut(s)	753, 1380
BseLI	CCNNNNNNNGG	8 cut(s)	75, 219, 220, 604, 770, 771, 1089, 1170
BseMI	GCAATG	2 cut(s)	1068, 1191
BseMII	CTCAG	3 cut(s)	74, 504, 1034
BseNI	ACTGG	2 cut(s)	877, 965
BseSI	GKGCMC	1 cut(s)	412
BseX3I	CGGCCG	1 cut(s)	541
BseXI	GCAGC	5 cut(s)	35, 380, 674, 1384, 1387
BseYI	CCCAGC	2 cut(s)	1175, 1346
BsgI	GTGCAG	1 cut(s)	88
Bsh1236I	CGCG	3 cut(s)	76, 452, 1259
Bsh1285I	CGRYCG	2 cut(s)	544, 548
BshFI	GGCC	5 cut(s)	119, 527, 543, 623, 1237
BshNI	GGYRCC	1 cut(s)	1009
BsiEI	CGRYCG	2 cut(s)	544, 548
BsiHKAI	GWGCWC	3 cut(s)	412, 519, 901
BsiHKCI	CYCGRG	2 cut(s)	17, 938
BsiSI	CCGG	6 cut(s)	18, 94, 540, 704, 1035, 1164
BslFI	GGGAC	5 cut(s)	76, 299, 342, 1051, 1314
BslI	CCNNNNNNNGG	8 cut(s)	75, 219, 220, 604, 770, 771, 1089, 1170
BsmAI	GTCTC	2 cut(s)	58, 127
BsmBI	CGTCTC	1 cut(s)	127
BsmFI	GGGAC	5 cut(s)	76, 299, 342, 1051, 1314
BsnI	GGCC	5 cut(s)	119, 527, 543, 623, 1237
Bso31I	GGTCTC	1 cut(s)	58
BsoBI	CYCGRG	2 cut(s)	17, 938
Bsp1286I	GDGCHC	3 cut(s)	412, 519, 901
Bsp1407I	TGTACA	1 cut(s)	1242
Bsp143I	GATC	6 cut(s)	272, 320, 447, 552, 589, 1128
Bsp19I	CCATGG	1 cut(s)	577
BspACI	CCGC	7 cut(s)	76, 97, 452, 520, 820, 1070, 1275
BspANI	GGCC	5 cut(s)	119, 527, 543, 623, 1237
BspCNI	CTCAG	3 cut(s)	73, 503, 1035
BspFNI	CGCG	3 cut(s)	76, 452, 1259
BspLI	GGNNCC	3 cut(s)	330, 1011, 1101
BspMI	ACCTGC	1 cut(s)	340
BspPI	GGATC	3 cut(s)	280, 328, 584
BspT107I	GGYRCC	1 cut(s)	1009
BspTI	CTTAAG	1 cut(s)	1085
BspTNI	GGTCTC	1 cut(s)	58
BsrDI	GCAATG	2 cut(s)	1068, 1191
BsrFI	RCCGGY	2 cut(s)	539, 703
BsrGI	TGTACA	1 cut(s)	1242
BsrI	ACTGG	2 cut(s)	877, 965
BssAI	RCCGGY	2 cut(s)	539, 703
BssECI	CCNNGG	5 cut(s)	16, 17, 18, 183, 577
BssMI	GATC	6 cut(s)	272, 320, 447, 552, 589, 1128
BssNAI	GTATAC	1 cut(s)	1321
BssT1I	CCWWGG	2 cut(s)	183, 577
Bst1107I	GTATAC	1 cut(s)	1321
Bst2UI	CCWGG	4 cut(s)	198, 648, 1104, 1121
Bst4CI	ACNGT	4 cut(s)	109, 445, 893, 1338
Bst6I	CTCTTC	2 cut(s)	134, 1163
BstAFI	CTTAAG	1 cut(s)	1085
BstAPI	GCANNNNNTGC	2 cut(s)	1067, 1283
BstAUI	TGTACA	1 cut(s)	1242
BstC8I	GCNNGC	6 cut(s)	168, 348, 505, 705, 824, 1182
BstDEI	CTNAG	3 cut(s)	60, 490, 1043
BstDSI	CCRYGG	1 cut(s)	577
BstENI	CCTNNNNNAGG	1 cut(s)	602
BstF5I	GGATG	2 cut(s)	753, 1380
BstFNI	CGCG	3 cut(s)	76, 452, 1259
BstHHI	GCGC	1 cut(s)	1366
BstKTI	GATC	6 cut(s)	275, 323, 450, 555, 592, 1131
BstMAI	GTCTC	2 cut(s)	58, 127
BstMBI	GATC	6 cut(s)	272, 320, 447, 552, 589, 1128
BstMCI	CGRYCG	2 cut(s)	544, 548
BstMWI	GCNNNNNNNGC	6 cut(s)	82, 374, 713, 1067, 1181, 1283
BstNI	CCWGG	4 cut(s)	198, 648, 1104, 1121
BstNSI	RCATGY	5 cut(s)	283, 350, 507, 1184, 1213
BstSCI	CCNGG	9 cut(s)	16, 17, 92, 196, 646, 1034, 1102, 1119, 1163
BstSLI	GKGCMC	1 cut(s)	412
BstUI	CGCG	3 cut(s)	76, 452, 1259
BstV1I	GCAGC	5 cut(s)	35, 380, 674, 1384, 1387
BstV2I	GAAGAC	2 cut(s)	410, 839
BstX2I	RGATCY	1 cut(s)	272
BstYI	RGATCY	1 cut(s)	272
BstZ17I	GTATAC	1 cut(s)	1321
BstZI	CGGCCG	1 cut(s)	541
BsuI	GTATCC	1 cut(s)	827
BsuRI	GGCC	5 cut(s)	119, 527, 543, 623, 1237
BtgI	CCRYGG	1 cut(s)	577
BtsCI	GGATG	2 cut(s)	753, 1380
BtsIMutI	CAGTG	1 cut(s)	1227
BveI	ACCTGC	1 cut(s)	340
Cac8I	GCNNGC	6 cut(s)	168, 348, 505, 705, 824, 1182
CaiI	CAGNNNCTG	1 cut(s)	443
CfoI	GCGC	1 cut(s)	1366
Cfr10I	RCCGGY	2 cut(s)	539, 703
Cfr13I	GGNCC	4 cut(s)	329, 526, 1019, 1235
Cfr9I	CCCGGG	1 cut(s)	17
CseI	GACGC	1 cut(s)	1265
CsiI	ACCWGGT	1 cut(s)	646
Csp6I	GTAC	6 cut(s)	304, 362, 495, 1027, 1198, 1243
CviAII	CATG	8 cut(s)	280, 347, 504, 508, 578, 584, 1181, 1210
CviQI	GTAC	6 cut(s)	304, 362, 495, 1027, 1198, 1243
DdeI	CTNAG	3 cut(s)	60, 490, 1043
DpnI	GATC	6 cut(s)	274, 322, 449, 554, 591, 1130
DpnII	GATC	6 cut(s)	272, 320, 447, 552, 589, 1128
DraIII	CACNNNGTG	1 cut(s)	650
DriI	GACNNNNNGTC	1 cut(s)	965
EaeI	YGGCCR	3 cut(s)	117, 541, 621
EagI	CGGCCG	1 cut(s)	541
Eam1104I	CTCTTC	2 cut(s)	134, 1163
Eam1105I	GACNNNNNGTC	1 cut(s)	965
EarI	CTCTTC	2 cut(s)	134, 1163
EclXI	CGGCCG	1 cut(s)	541
Eco130I	CCWWGG	2 cut(s)	183, 577
Eco31I	GGTCTC	1 cut(s)	58
Eco47I	GGWCC	2 cut(s)	329, 1019
Eco52I	CGGCCG	1 cut(s)	541
Eco57I	CTGAAG	1 cut(s)	1251
Eco88I	CYCGRG	2 cut(s)	17, 938
EcoNI	CCTNNNNNAGG	1 cut(s)	602
EcoO109I	RGGNCCY	2 cut(s)	329, 1235
EcoRI	GAATTC	1 cut(s)	208
EcoRII	CCWGG	4 cut(s)	196, 646, 1102, 1119
EcoT14I	CCWWGG	2 cut(s)	183, 577
EcoT22I	ATGCAT	1 cut(s)	509
ErhI	CCWWGG	2 cut(s)	183, 577
Esp3I	CGTCTC	1 cut(s)	127
FaeI	CATG	8 cut(s)	283, 350, 507, 511, 581, 587, 1184, 1213
FaqI	GGGAC	5 cut(s)	76, 299, 342, 1051, 1314
FatI	CATG	8 cut(s)	279, 346, 503, 507, 577, 583, 1180, 1209
FauI	CCCGC	1 cut(s)	1063
FauNDI	CATATG	1 cut(s)	976
FblI	GTMKAC	1 cut(s)	1320
Fnu4HI	GCNGC	6 cut(s)	24, 369, 453, 663, 1398, 1401
FokI	GGATG	2 cut(s)	740, 1367
Fsp4HI	GCNGC	6 cut(s)	24, 369, 453, 663, 1398, 1401
FspBI	CTAG	3 cut(s)	399, 422, 629
GlaI	GCGC	1 cut(s)	1365
GluI	GCNGC	6 cut(s)	24, 369, 453, 663, 1398, 1401
GsaI	CCCAGC	2 cut(s)	1179, 1350
GsuI	CTGGAG	3 cut(s)	219, 768, 1328
HaeIII	GGCC	5 cut(s)	119, 527, 543, 623, 1237
HapII	CCGG	6 cut(s)	18, 94, 540, 704, 1035, 1164
HgaI	GACGC	1 cut(s)	1265
HhaI	GCGC	1 cut(s)	1366
Hin1II	CATG	8 cut(s)	283, 350, 507, 511, 581, 587, 1184, 1213
Hin6I	GCGC	1 cut(s)	1364
HinP1I	GCGC	1 cut(s)	1364
HindIII	AAGCTT	1 cut(s)	1357
HinfI	GANTC	7 cut(s)	46, 260, 641, 750, 876, 1039, 1075
HpaII	CCGG	6 cut(s)	18, 94, 540, 704, 1035, 1164
HphI	GGTGA	3 cut(s)	636, 820, 1148
Hpy166II	GTNNAC	9 cut(s)	242, 410, 487, 959, 983, 1139, 1243, 1321, 1353
Hpy188I	TCNGA	6 cut(s)	51, 63, 163, 657, 802, 1044
Hpy188III	TCNNGA	6 cut(s)	112, 152, 422, 638, 923, 940
Hpy8I	GTNNAC	9 cut(s)	242, 410, 487, 959, 983, 1139, 1243, 1321, 1353
Hpy99I	CGWCG	1 cut(s)	32
HpyAV	CCTTC	4 cut(s)	385, 652, 1226, 1307
HpyCH4III	ACNGT	4 cut(s)	109, 445, 893, 1338
HpyCH4V	TGCA	9 cut(s)	105, 350, 368, 410, 507, 533, 974, 1184, 1286
HpyF10VI	GCNNNNNNNGC	6 cut(s)	82, 374, 713, 1067, 1181, 1283
HpyF3I	CTNAG	3 cut(s)	60, 490, 1043
Hsp92II	CATG	8 cut(s)	283, 350, 507, 511, 581, 587, 1184, 1213
HspAI	GCGC	1 cut(s)	1364
KroI	GCCGGC	1 cut(s)	703
KroNI	GCCGGC	1 cut(s)	705
Kzo9I	GATC	6 cut(s)	272, 320, 447, 552, 589, 1128
LmnI	GCTCC	4 cut(s)	522, 896, 1099, 1333
Lsp1109I	GCAGC	5 cut(s)	35, 380, 674, 1384, 1387
LweI	GCATC	2 cut(s)	183, 1150
MabI	ACCWGGT	1 cut(s)	646
MaeI	CTAG	3 cut(s)	399, 422, 629
MaeIII	GTNAC	3 cut(s)	572, 1268, 1332
MalI	GATC	6 cut(s)	274, 322, 449, 554, 591, 1130
MboI	GATC	6 cut(s)	272, 320, 447, 552, 589, 1128
MboII	GAAGA	8 cut(s)	148, 151, 400, 410, 562, 839, 1180, 1216
MflI	RGATCY	1 cut(s)	272
MhlI	GDGCHC	3 cut(s)	412, 519, 901
MlsI	TGGCCA	1 cut(s)	623
MluCI	AATT	2 cut(s)	208, 741
MluNI	TGGCCA	1 cut(s)	623
MlyI	GAGTC	4 cut(s)	40, 635, 759, 1033
Mox20I	TGGCCA	1 cut(s)	623
Mph1103I	ATGCAT	1 cut(s)	509
MroNI	GCCGGC	1 cut(s)	703
MroXI	GAANNNNTTC	3 cut(s)	143, 474, 1143
MscI	TGGCCA	1 cut(s)	623
MseI	TTAA	6 cut(s)	228, 267, 558, 810, 929, 1086
MslI	CAYNNNNRTG	4 cut(s)	351, 470, 512, 582
Msp20I	TGGCCA	1 cut(s)	623
MspCI	CTTAAG	1 cut(s)	1085
MspI	CCGG	6 cut(s)	18, 94, 540, 704, 1035, 1164
MspR9I	CCNGG	9 cut(s)	18, 19, 94, 198, 648, 1036, 1104, 1121, 1165
MvaI	CCWGG	4 cut(s)	198, 648, 1104, 1121
MvnI	CGCG	3 cut(s)	76, 452, 1259
MwoI	GCNNNNNNNGC	6 cut(s)	82, 374, 713, 1067, 1181, 1283
NaeI	GCCGGC	1 cut(s)	705
NciI	CCSGG	5 cut(s)	18, 19, 94, 1036, 1165
NcoI	CCATGG	1 cut(s)	577
NdeI	CATATG	1 cut(s)	976
NdeII	GATC	6 cut(s)	272, 320, 447, 552, 589, 1128
NgoMIV	GCCGGC	1 cut(s)	703
NlaIII	CATG	8 cut(s)	283, 350, 507, 511, 581, 587, 1184, 1213
NlaIV	GGNNCC	3 cut(s)	330, 1011, 1101
NmuCI	GTSAC	2 cut(s)	1268, 1332
NsiI	ATGCAT	1 cut(s)	509
NspI	RCATGY	5 cut(s)	283, 350, 507, 1184, 1213
PaeI	GCATGC	3 cut(s)	350, 507, 1184
PciI	ACATGT	1 cut(s)	279
PcsI	WCGNNNNNNNCGW	1 cut(s)	159
PdiI	GCCGGC	1 cut(s)	705
PdmI	GAANNNNTTC	3 cut(s)	143, 474, 1143
PfeI	GAWTC	3 cut(s)	260, 876, 1075
PkrI	GCNGC	6 cut(s)	25, 370, 454, 664, 1399, 1402
PleI	GAGTC	4 cut(s)	40, 635, 758, 1033
PpsI	GAGTC	4 cut(s)	40, 635, 758, 1033
PpuMI	RGGWCCY	1 cut(s)	329
PscI	ACATGT	1 cut(s)	279
Psp5II	RGGWCCY	1 cut(s)	329
Psp6I	CCWGG	4 cut(s)	196, 646, 1102, 1119
PspFI	CCCAGC	2 cut(s)	1175, 1346
PspGI	CCWGG	4 cut(s)	196, 646, 1102, 1119
PspN4I	GGNNCC	3 cut(s)	330, 1011, 1101
PspPI	GGNCC	4 cut(s)	329, 526, 1019, 1235
PspPPI	RGGWCCY	1 cut(s)	329
PstNI	CAGNNNCTG	1 cut(s)	443
PsuI	RGATCY	1 cut(s)	272
RsaI	GTAC	6 cut(s)	305, 363, 496, 1028, 1199, 1244
RsaNI	GTAC	6 cut(s)	304, 362, 495, 1027, 1198, 1243
RseI	CAYNNNNRTG	4 cut(s)	351, 470, 512, 582
SaqAI	TTAA	6 cut(s)	228, 267, 558, 810, 929, 1086
SatI	GCNGC	6 cut(s)	24, 369, 453, 663, 1398, 1401
Sau3AI	GATC	6 cut(s)	272, 320, 447, 552, 589, 1128
Sau96I	GGNCC	4 cut(s)	329, 526, 1019, 1235
SchI	GAGTC	4 cut(s)	40, 635, 759, 1033
ScrFI	CCNGG	9 cut(s)	18, 19, 94, 198, 648, 1036, 1104, 1121, 1165
SduI	GDGCHC	3 cut(s)	412, 519, 901
SexAI	ACCWGGT	1 cut(s)	646
SfaNI	GCATC	2 cut(s)	183, 1150
SinI	GGWCC	2 cut(s)	329, 1019
SmaI	CCCGGG	1 cut(s)	19
SmiMI	CAYNNNNRTG	4 cut(s)	351, 470, 512, 582
SmlI	CTYRAG	1 cut(s)	1085
SmoI	CTYRAG	1 cut(s)	1085
SphI	GCATGC	3 cut(s)	350, 507, 1184
Sse9I	AATT	2 cut(s)	208, 741
SsiI	CCGC	7 cut(s)	76, 97, 452, 520, 820, 1070, 1275
SspMI	CTAG	3 cut(s)	399, 422, 629
StyD4I	CCNGG	9 cut(s)	16, 17, 92, 196, 646, 1034, 1102, 1119, 1163
StyI	CCWWGG	2 cut(s)	183, 577
TaaI	ACNGT	4 cut(s)	109, 445, 893, 1338
TaqI	TCGA	6 cut(s)	44, 129, 153, 309, 478, 564
TaqII	GACCGA	2 cut(s)	562, 1036
TasI	AATT	2 cut(s)	208, 741
TatI	WGTACW	2 cut(s)	303, 1242
TauI	GCSGC	1 cut(s)	455
TfiI	GAWTC	3 cut(s)	260, 876, 1075
Tru1I	TTAA	6 cut(s)	228, 267, 558, 810, 929, 1086
Tru9I	TTAA	6 cut(s)	228, 267, 558, 810, 929, 1086
TscAI	CASTG	1 cut(s)	1234
TseFI	GTSAC	2 cut(s)	1268, 1332
TseI	GCWGC	5 cut(s)	23, 368, 662, 1397, 1400
Tsp45I	GTSAC	2 cut(s)	1268, 1332
TspDTI	ATGAA	5 cut(s)	401, 775, 876, 1067, 1128
TspGWI	ACGGA	4 cut(s)	869, 1000, 1320, 1388
TspMI	CCCGGG	1 cut(s)	17
TspRI	CASTG	1 cut(s)	1234
Vha464I	CTTAAG	1 cut(s)	1085
VneI	GTGCAC	1 cut(s)	408
VpaK11BI	GGWCC	2 cut(s)	329, 1019
XagI	CCTNNNNNAGG	1 cut(s)	602
XapI	RAATTY	1 cut(s)	208
XbaI	TCTAGA	1 cut(s)	421
XceI	RCATGY	5 cut(s)	283, 350, 507, 1184, 1213
XmaI	CCCGGG	1 cut(s)	17
XmiI	GTMKAC	1 cut(s)	1320
XmnI	GAANNNNTTC	3 cut(s)	143, 474, 1143
XspI	CTAG	3 cut(s)	399, 422, 629
Zsp2I	ATGCAT	1 cut(s)	509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.