Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0011111

Physical Location & Seq

Genomic Coordinates Reverse (-)

17918016 .. 17921324

Gene Structure 3309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g12820.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGCTTATAAAAGGAATCCTGGTCTAACTTTCTTCTCTCACTTTATCTTCTTCATCCAAACGACTCCACGAGATAGAGGAGGAAGAGAGAGATTTAGAGCAACCATGGCGAGCACAATCCCCGGGGCAGCCGTCGGGCTTTCCTGCTCGACTCCGAAGCTCTCTCAGAGACCCACCTCGCGGTTTTCGCAATCGTCCCGGCGGTTCTGCACCATCAAGATGGCCGTCTCCCTCGATGAGAAGAAGAAGAGTTTCACTCTCGAAAAATCCGAACAGGCTTTCAATGCCGCCAAGGAGTTGATGCCTGGAGGAGTAAATTCCCCTGTTCGGGCTTTTAAGTCTGTTGGTGGACAACCTATTGTGATGGATTCTGTTAAGGGATCTCACATGTGGGACATAGATGGAAATGAGTACATCGACTATGTGGGATCGTGGGGACCTGCTATAATCGGGCATGCAGATGATGAGGTACTTGCAGCTCTGGCTGAAACGATGAAGAAGGGAACTAGCTTTGGTGCACCTTGTCTTCTAGAGAATATTCTGGCAGAAACTGTGATCGCGGCTGTTCCAAGCATTGAAATGGTTCGATTTGTGAACTCAGGTACTGAAGCATGCATGGGTGTGCTCCGCTTGGCCCGTGCATACACTGGCCGACCGAAGATCATTAAGTTCGAGGGCTGTTACCATGGTCATGCTGATCCATTCCTTGTCAAGGCTGGTAGTGGAGTGGCCACACTAGGACTTCCAGACTCACCTGGTGTTCCGAAGGCAGCCACTTTTGATACTCTAACAGCCCCCTACAATGACTTGCCGGCTGTGGAAGCTCTTTTTGAAAATCACAAAGGAGAAATTGCTGGAGTCATCCTTGAACCCGTTGTTGGGAACGCTGGCTTCATTACTCCCAAATCCGATTTCCTTAATGGTATCCGCAAGCTCACCAAAGAAAATGATACTCTCCTCATATTTGATGAAGTGATGACTGGATTCCGCTTGTCTTATGGTGGTGCACAGGAGTATTTTGGCATTACTCCTGATTTAACAACACTCGGGAAAATCATTGGTGGTGGACTGCCAGTCGGTGCATATGGTGGAAGGAGGGAGATTATGGAAATGGTGGCACCAGCAGGACCGATGTACCAAGCCGGGACCCTGAGTGGAAATCCATTAGCAATGACTGCGGGGATTCATACCCTTAAGAGGTTGAGGGAGCCAGGAAGTTATGAATACCTGGATAAGATCACAGGTGAACTCATTCAAGGTATCATAGAAGCCGGGAAGAGGGCTGGGCATGCAATGTGTGGTGGGTACATAAGTGGCATGTTCGGGTTTTTCTTCACTGAAGGGCCTGTGTACAACTTTGAGGACGCGAAAAAGAGTGAGACTGCAAAGTTTGCAAAGTTTTATAGGGGACTGCTGGAGGAAGGTGTATACCTTGCTCCGTCACAGTTCGAGGCTGGGTTTACAAGCTTGGCACATACTCCGGAGGACATCCAAAACACGATAGCTGCTGCTGATAGAGTTTTTAGGCAGATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048046

KEGG Pathways

Metabolic & Signaling

ko00860 ko01100 ko01110 ko01120 map00860 map01100 map01110 map01120

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

512

Amino Acids

55.12

Weight (kDa)

7.12

Isoelectric Point (pI)

35.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48730 AT5G63570 AT5G63570
fragaria_vesca	FvH4_5g08950 FvH4_5g08950
malus_domestica	MD06G1136900.v1.1 MD14G1151700.v1.1
prunus_persica	Prupe.5G146800_v2.0.a1 Prupe.5G146800_v2.0.a1
pyrus_communis	pycom06g12820
rosa_chinensis	RchiOBHm_Chr7g0189421
rosa_laevigata	RLG00000003783 RLG00000004612
rosa_multiflora	Rmu_sc0001282.1_g000016
rosa_roxburghii	Rroxscaffold_3G00256580 Rroxscaffold_3G00265490
rosa_rugosa	Rorug06G0497700
rosa_samantha	Rh7BG105200 Rh7DG104600
rosa_wichuraiana	Rw7G008870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	9
Acc36I	ACCTGC	1 cut(s)	448
AccB1I	GGYRCC	1 cut(s)	1117
AccI	GTMKAC	1 cut(s)	1428
AccII	CGCG	3 cut(s)	181, 560, 1367
AccIII	TCCGGA	1 cut(s)	1480
AciI	CCGC	8 cut(s)	181, 202, 288, 560, 628, 928, 988, 1178
AclWI	GGATC	3 cut(s)	388, 436, 692
AcoI	YGGCCR	3 cut(s)	222, 649, 729
AcsI	RAATTY	1 cut(s)	316
AcuI	CTGAAG	2 cut(s)	627, 1359
AdeI	CACNNNGTG	1 cut(s)	758
AfaI	GTAC	6 cut(s)	413, 471, 604, 1136, 1307, 1352
AfiI	CCNNNNNNNGG	8 cut(s)	180, 327, 328, 712, 878, 879, 1197, 1278
AflII	CTTAAG	1 cut(s)	1193
AflIII	ACRYGT	1 cut(s)	387
AgsI	TTSAA	5 cut(s)	283, 578, 833, 869, 1256
AhdI	GACNNNNNGTC	1 cut(s)	1073
AjnI	CCWGG	5 cut(s)	19, 304, 754, 1210, 1227
AjuI	GAANNNNNNNTTGG	4 cut(s)	861, 893, 896, 928
AluBI	AGCT	7 cut(s)	160, 479, 510, 824, 934, 1467, 1505
AluI	AGCT	7 cut(s)	160, 479, 510, 824, 934, 1467, 1505
Alw21I	GWGCWC	4 cut(s)	116, 520, 627, 1009
Alw26I	GTCTC	3 cut(s)	163, 232, 1373
Alw44I	GTGCAC	2 cut(s)	516, 1005
AlwI	GGATC	3 cut(s)	388, 436, 692
AlwNI	CAGNNNCTG	2 cut(s)	551, 605
Ama87I	CYCGRG	2 cut(s)	122, 1046
Aor13HI	TCCGGA	1 cut(s)	1480
AoxI	GGCC	5 cut(s)	222, 633, 649, 729, 1343
ApaLI	GTGCAC	2 cut(s)	516, 1005
ApeKI	GCWGC	5 cut(s)	128, 476, 770, 1505, 1508
ApoI	RAATTY	1 cut(s)	316
Asp700I	GAANNNNTTC	3 cut(s)	251, 582, 1251
AspS9I	GGNCC	5 cut(s)	437, 634, 1127, 1146, 1343
AsuC2I	CCSGG	5 cut(s)	123, 124, 199, 1144, 1273
AsuHPI	GGTGA	3 cut(s)	744, 928, 1256
AvaI	CYCGRG	2 cut(s)	122, 1046
AvaII	GGWCC	3 cut(s)	437, 1127, 1146
BaeGI	GKGCMC	2 cut(s)	520, 1009
BaeI	ACNNNNGTAYC	4 cut(s)	1118, 1151, 1297, 1330
BalI	TGGCCA	1 cut(s)	731
BanI	GGYRCC	1 cut(s)	1117
BauI	CACGAG	1 cut(s)	69
BbsI	GAAGAC	1 cut(s)	518
Bbv12I	GWGCWC	4 cut(s)	116, 520, 627, 1009
BbvI	GCAGC	5 cut(s)	140, 488, 782, 1492, 1495
BccI	CCATC	4 cut(s)	214, 221, 358, 395
BceAI	ACGGC	2 cut(s)	116, 209
BciT130I	CCWGG	5 cut(s)	21, 306, 756, 1212, 1229
BciVI	GTATCC	1 cut(s)	935
BcnI	CCSGG	5 cut(s)	123, 124, 199, 1144, 1273
BcoDI	GTCTC	3 cut(s)	163, 232, 1373
BfaI	CTAG	3 cut(s)	507, 530, 737
BfrI	CTTAAG	1 cut(s)	1193
BfuAI	ACCTGC	1 cut(s)	448
BfuI	GTATCC	1 cut(s)	935
BisI	GCNGC	7 cut(s)	129, 288, 477, 561, 771, 1506, 1509
BlsI	GCNGC	7 cut(s)	130, 289, 478, 562, 772, 1507, 1510
Bme18I	GGWCC	3 cut(s)	437, 1127, 1146
BmeRI	GACNNNNNGTC	1 cut(s)	1073
BmeT110I	CYCGRG	2 cut(s)	122, 1046
BmgT120I	GGNCC	5 cut(s)	437, 634, 1127, 1146, 1343
BmiI	GGNNCC	5 cut(s)	438, 1119, 1147, 1148, 1209
BmsI	GCATC	1 cut(s)	291
BpiI	GAAGAC	1 cut(s)	518
BplI	GAGNNNNNCTC	2 cut(s)	241, 273
BpmI	CTGGAG	3 cut(s)	327, 876, 1436
BpuMI	CCSGG	5 cut(s)	123, 124, 199, 1144, 1273
BsaI	GGTCTC	1 cut(s)	163
BsaJI	CCNNGG	6 cut(s)	105, 121, 122, 123, 291, 685
BsaWI	WCCGGW	1 cut(s)	1480
Bsc4I	CCNNNNNNNGG	8 cut(s)	180, 327, 328, 712, 878, 879, 1197, 1278
Bse118I	RCCGGY	1 cut(s)	811
Bse1I	ACTGG	3 cut(s)	652, 985, 1073
Bse3DI	GCAATG	2 cut(s)	1176, 1299
BseAI	TCCGGA	1 cut(s)	1480
BseBI	CCWGG	5 cut(s)	21, 306, 756, 1212, 1229
BseDI	CCNNGG	6 cut(s)	105, 121, 122, 123, 291, 685
BseGI	GGATG	3 cut(s)	54, 861, 1488
BseLI	CCNNNNNNNGG	8 cut(s)	180, 327, 328, 712, 878, 879, 1197, 1278
BseMI	GCAATG	2 cut(s)	1176, 1299
BseMII	CTCAG	3 cut(s)	179, 612, 1142
BseNI	ACTGG	3 cut(s)	652, 985, 1073
BseRI	GAGGAG	3 cut(s)	93, 324, 947
BseSI	GKGCMC	2 cut(s)	520, 1009
BseXI	GCAGC	5 cut(s)	140, 488, 782, 1492, 1495
BseYI	CCCAGC	2 cut(s)	1283, 1454
BsgI	GTGCAG	1 cut(s)	193
Bsh1236I	CGCG	3 cut(s)	181, 560, 1367
Bsh1285I	CGRYCG	1 cut(s)	656
BshFI	GGCC	5 cut(s)	224, 635, 651, 731, 1345
BshNI	GGYRCC	1 cut(s)	1117
BsiEI	CGRYCG	1 cut(s)	656
BsiHKAI	GWGCWC	4 cut(s)	116, 520, 627, 1009
BsiHKCI	CYCGRG	2 cut(s)	122, 1046
BsiSI	CCGG	6 cut(s)	123, 199, 812, 1143, 1272, 1481
BslFI	GGGAC	5 cut(s)	181, 407, 450, 1159, 1422
BslI	CCNNNNNNNGG	8 cut(s)	180, 327, 328, 712, 878, 879, 1197, 1278
BsmAI	GTCTC	3 cut(s)	163, 232, 1373
BsmBI	CGTCTC	1 cut(s)	232
BsmFI	GGGAC	5 cut(s)	181, 407, 450, 1159, 1422
BsnI	GGCC	5 cut(s)	224, 635, 651, 731, 1345
Bso31I	GGTCTC	1 cut(s)	163
BsoBI	CYCGRG	2 cut(s)	122, 1046
Bsp1286I	GDGCHC	4 cut(s)	116, 520, 627, 1009
Bsp13I	TCCGGA	1 cut(s)	1480
Bsp1407I	TGTACA	1 cut(s)	1350
Bsp143I	GATC	6 cut(s)	380, 428, 555, 660, 697, 1236
Bsp19I	CCATGG	2 cut(s)	105, 685
BspACI	CCGC	8 cut(s)	181, 202, 288, 560, 628, 928, 988, 1178
BspANI	GGCC	5 cut(s)	224, 635, 651, 731, 1345
BspCNI	CTCAG	3 cut(s)	178, 611, 1143
BspEI	TCCGGA	1 cut(s)	1480
BspFNI	CGCG	3 cut(s)	181, 560, 1367
BspLI	GGNNCC	5 cut(s)	438, 1119, 1147, 1148, 1209
BspMI	ACCTGC	1 cut(s)	448
BspPI	GGATC	3 cut(s)	388, 436, 692
BspT107I	GGYRCC	1 cut(s)	1117
BspTI	CTTAAG	1 cut(s)	1193
BspTNI	GGTCTC	1 cut(s)	163
BsrDI	GCAATG	2 cut(s)	1176, 1299
BsrFI	RCCGGY	1 cut(s)	811
BsrGI	TGTACA	1 cut(s)	1350
BsrI	ACTGG	3 cut(s)	652, 985, 1073
BssAI	RCCGGY	1 cut(s)	811
BssECI	CCNNGG	6 cut(s)	105, 121, 122, 123, 291, 685
BssMI	GATC	6 cut(s)	380, 428, 555, 660, 697, 1236
BssNAI	GTATAC	1 cut(s)	1429
BssSI	CACGAG	1 cut(s)	69
BssT1I	CCWWGG	3 cut(s)	105, 291, 685
Bst1107I	GTATAC	1 cut(s)	1429
Bst2BI	CACGAG	1 cut(s)	69
Bst2UI	CCWGG	5 cut(s)	21, 306, 756, 1212, 1229
Bst4CI	ACNGT	2 cut(s)	553, 1446
Bst6I	CTCTTC	3 cut(s)	79, 242, 1271
BstAFI	CTTAAG	1 cut(s)	1193
BstAPI	GCANNNNNTGC	2 cut(s)	1175, 1391
BstAUI	TGTACA	1 cut(s)	1350
BstC8I	GCNNGC	7 cut(s)	112, 456, 613, 813, 889, 932, 1290
BstDEI	CTNAG	3 cut(s)	165, 598, 1151
BstDSI	CCRYGG	2 cut(s)	105, 685
BstENI	CCTNNNNNAGG	1 cut(s)	710
BstF5I	GGATG	3 cut(s)	54, 861, 1488
BstFNI	CGCG	3 cut(s)	181, 560, 1367
BstKTI	GATC	6 cut(s)	383, 431, 558, 663, 700, 1239
BstMAI	GTCTC	3 cut(s)	163, 232, 1373
BstMBI	GATC	6 cut(s)	380, 428, 555, 660, 697, 1236
BstMCI	CGRYCG	1 cut(s)	656
BstMWI	GCNNNNNNNGC	8 cut(s)	107, 187, 284, 482, 821, 1175, 1289, 1391
BstNI	CCWGG	5 cut(s)	21, 306, 756, 1212, 1229
BstNSI	RCATGY	5 cut(s)	391, 458, 615, 1292, 1321
BstSLI	GKGCMC	2 cut(s)	520, 1009
BstUI	CGCG	3 cut(s)	181, 560, 1367
BstV1I	GCAGC	5 cut(s)	140, 488, 782, 1492, 1495
BstV2I	GAAGAC	1 cut(s)	518
BstX2I	RGATCY	1 cut(s)	380
BstXI	CCANNNNNNTGG	1 cut(s)	220
BstYI	RGATCY	1 cut(s)	380
BstZ17I	GTATAC	1 cut(s)	1429
BsuI	GTATCC	1 cut(s)	935
BsuRI	GGCC	5 cut(s)	224, 635, 651, 731, 1345
BtgI	CCRYGG	2 cut(s)	105, 685
BtsCI	GGATG	3 cut(s)	54, 861, 1488
BtsIMutI	CAGTG	2 cut(s)	645, 1335
BveI	ACCTGC	1 cut(s)	448
Cac8I	GCNNGC	7 cut(s)	112, 456, 613, 813, 889, 932, 1290
CaiI	CAGNNNCTG	2 cut(s)	551, 605
Cfr10I	RCCGGY	1 cut(s)	811
Cfr13I	GGNCC	5 cut(s)	437, 634, 1127, 1146, 1343
Cfr9I	CCCGGG	1 cut(s)	122
CseI	GACGC	1 cut(s)	1373
CsiI	ACCWGGT	1 cut(s)	754
Csp6I	GTAC	6 cut(s)	412, 470, 603, 1135, 1306, 1351
CviAII	CATG	9 cut(s)	106, 388, 455, 612, 616, 686, 692, 1289, 1318
CviQI	GTAC	6 cut(s)	412, 470, 603, 1135, 1306, 1351
DdeI	CTNAG	3 cut(s)	165, 598, 1151
DpnI	GATC	6 cut(s)	382, 430, 557, 662, 699, 1238
DpnII	GATC	6 cut(s)	380, 428, 555, 660, 697, 1236
DraIII	CACNNNGTG	1 cut(s)	758
DriI	GACNNNNNGTC	1 cut(s)	1073
EaeI	YGGCCR	3 cut(s)	222, 649, 729
Eam1104I	CTCTTC	3 cut(s)	79, 242, 1271
Eam1105I	GACNNNNNGTC	1 cut(s)	1073
EarI	CTCTTC	3 cut(s)	79, 242, 1271
Eco130I	CCWWGG	3 cut(s)	105, 291, 685
Eco31I	GGTCTC	1 cut(s)	163
Eco47I	GGWCC	3 cut(s)	437, 1127, 1146
Eco57I	CTGAAG	2 cut(s)	627, 1359
Eco88I	CYCGRG	2 cut(s)	122, 1046
EcoNI	CCTNNNNNAGG	1 cut(s)	710
EcoO109I	RGGNCCY	3 cut(s)	437, 1146, 1343
EcoRII	CCWGG	5 cut(s)	19, 304, 754, 1210, 1227
EcoT14I	CCWWGG	3 cut(s)	105, 291, 685
EcoT22I	ATGCAT	1 cut(s)	617
ErhI	CCWWGG	3 cut(s)	105, 291, 685
Esp3I	CGTCTC	1 cut(s)	232
FaeI	CATG	9 cut(s)	109, 391, 458, 615, 619, 689, 695, 1292, 1321
FaqI	GGGAC	5 cut(s)	181, 407, 450, 1159, 1422
FatI	CATG	9 cut(s)	105, 387, 454, 611, 615, 685, 691, 1288, 1317
FauI	CCCGC	1 cut(s)	1171
FauNDI	CATATG	1 cut(s)	1084
FblI	GTMKAC	1 cut(s)	1428
Fnu4HI	GCNGC	7 cut(s)	129, 288, 477, 561, 771, 1506, 1509
FokI	GGATG	3 cut(s)	41, 848, 1475
Fsp4HI	GCNGC	7 cut(s)	129, 288, 477, 561, 771, 1506, 1509
FspBI	CTAG	3 cut(s)	507, 530, 737
GluI	GCNGC	7 cut(s)	129, 288, 477, 561, 771, 1506, 1509
GsaI	CCCAGC	2 cut(s)	1287, 1458
GsuI	CTGGAG	3 cut(s)	327, 876, 1436
HaeIII	GGCC	5 cut(s)	224, 635, 651, 731, 1345
HapII	CCGG	6 cut(s)	123, 199, 812, 1143, 1272, 1481
HgaI	GACGC	1 cut(s)	1373
Hin1II	CATG	9 cut(s)	109, 391, 458, 615, 619, 689, 695, 1292, 1321
HindIII	AAGCTT	1 cut(s)	1465
HinfI	GANTC	8 cut(s)	16, 64, 151, 368, 749, 858, 984, 1183
HpaII	CCGG	6 cut(s)	123, 199, 812, 1143, 1272, 1481
HphI	GGTGA	3 cut(s)	744, 928, 1256
Hpy166II	GTNNAC	9 cut(s)	350, 518, 595, 1007, 1067, 1247, 1351, 1429, 1461
Hpy188I	TCNGA	5 cut(s)	156, 168, 271, 765, 910
Hpy188III	TCNNGA	7 cut(s)	217, 260, 530, 746, 1031, 1048, 1481
Hpy8I	GTNNAC	9 cut(s)	350, 518, 595, 1007, 1067, 1247, 1351, 1429, 1461
Hpy99I	CGWCG	1 cut(s)	137
HpyAV	CCTTC	5 cut(s)	493, 760, 1086, 1334, 1415
HpyCH4III	ACNGT	2 cut(s)	553, 1446
HpyF10VI	GCNNNNNNNGC	8 cut(s)	107, 187, 284, 482, 821, 1175, 1289, 1391
HpyF3I	CTNAG	3 cut(s)	165, 598, 1151
Hsp92II	CATG	9 cut(s)	109, 391, 458, 615, 619, 689, 695, 1292, 1321
KflI	GGGWCCC	1 cut(s)	1146
Kpn2I	TCCGGA	1 cut(s)	1480
KroI	GCCGGC	1 cut(s)	811
KroNI	GCCGGC	1 cut(s)	813
Kzo9I	GATC	6 cut(s)	380, 428, 555, 660, 697, 1236
LmnI	GCTCC	3 cut(s)	630, 1207, 1441
Lsp1109I	GCAGC	5 cut(s)	140, 488, 782, 1492, 1495
LweI	GCATC	1 cut(s)	291
MabI	ACCWGGT	1 cut(s)	754
MaeI	CTAG	3 cut(s)	507, 530, 737
MaeIII	GTNAC	2 cut(s)	680, 1440
MalI	GATC	6 cut(s)	382, 430, 557, 662, 699, 1238
MboI	GATC	6 cut(s)	380, 428, 555, 660, 697, 1236
MflI	RGATCY	1 cut(s)	380
MhlI	GDGCHC	4 cut(s)	116, 520, 627, 1009
MlsI	TGGCCA	1 cut(s)	731
MluCI	AATT	2 cut(s)	316, 849
MluNI	TGGCCA	1 cut(s)	731
MlyI	GAGTC	4 cut(s)	58, 145, 743, 867
Mox20I	TGGCCA	1 cut(s)	731
Mph1103I	ATGCAT	1 cut(s)	617
MroI	TCCGGA	1 cut(s)	1480
MroNI	GCCGGC	1 cut(s)	811
MroXI	GAANNNNTTC	3 cut(s)	251, 582, 1251
MscI	TGGCCA	1 cut(s)	731
MseI	TTAA	6 cut(s)	336, 375, 666, 918, 1037, 1194
MslI	CAYNNNNRTG	5 cut(s)	218, 459, 578, 620, 690
Msp20I	TGGCCA	1 cut(s)	731
MspCI	CTTAAG	1 cut(s)	1193
MspI	CCGG	6 cut(s)	123, 199, 812, 1143, 1272, 1481
MvaI	CCWGG	5 cut(s)	21, 306, 756, 1212, 1229
MvnI	CGCG	3 cut(s)	181, 560, 1367
MwoI	GCNNNNNNNGC	8 cut(s)	107, 187, 284, 482, 821, 1175, 1289, 1391
NaeI	GCCGGC	1 cut(s)	813
NciI	CCSGG	5 cut(s)	123, 124, 199, 1144, 1273
NcoI	CCATGG	2 cut(s)	105, 685
NdeI	CATATG	1 cut(s)	1084
NdeII	GATC	6 cut(s)	380, 428, 555, 660, 697, 1236
NgoMIV	GCCGGC	1 cut(s)	811
NlaIII	CATG	9 cut(s)	109, 391, 458, 615, 619, 689, 695, 1292, 1321
NlaIV	GGNNCC	5 cut(s)	438, 1119, 1147, 1148, 1209
NmuCI	GTSAC	1 cut(s)	1440
NsiI	ATGCAT	1 cut(s)	617
NspI	RCATGY	5 cut(s)	391, 458, 615, 1292, 1321
PaeI	GCATGC	3 cut(s)	458, 615, 1292
PciI	ACATGT	1 cut(s)	387
PcsI	WCGNNNNNNNCGW	1 cut(s)	267
PdiI	GCCGGC	1 cut(s)	813
PdmI	GAANNNNTTC	3 cut(s)	251, 582, 1251
PfeI	GAWTC	4 cut(s)	16, 368, 984, 1183
PkrI	GCNGC	7 cut(s)	130, 289, 478, 562, 772, 1507, 1510
PleI	GAGTC	4 cut(s)	58, 145, 743, 866
PpsI	GAGTC	4 cut(s)	58, 145, 743, 866
PpuMI	RGGWCCY	2 cut(s)	437, 1146
PscI	ACATGT	1 cut(s)	387
PsiI	TTATAA	1 cut(s)	9
Psp5II	RGGWCCY	2 cut(s)	437, 1146
Psp6I	CCWGG	5 cut(s)	19, 304, 754, 1210, 1227
PspFI	CCCAGC	2 cut(s)	1283, 1454
PspGI	CCWGG	5 cut(s)	19, 304, 754, 1210, 1227
PspN4I	GGNNCC	5 cut(s)	438, 1119, 1147, 1148, 1209
PspPI	GGNCC	5 cut(s)	437, 634, 1127, 1146, 1343
PspPPI	RGGWCCY	2 cut(s)	437, 1146
PstNI	CAGNNNCTG	2 cut(s)	551, 605
PsuI	RGATCY	1 cut(s)	380
RsaI	GTAC	6 cut(s)	413, 471, 604, 1136, 1307, 1352
RsaNI	GTAC	6 cut(s)	412, 470, 603, 1135, 1306, 1351
RseI	CAYNNNNRTG	5 cut(s)	218, 459, 578, 620, 690
SaqAI	TTAA	6 cut(s)	336, 375, 666, 918, 1037, 1194
SatI	GCNGC	7 cut(s)	129, 288, 477, 561, 771, 1506, 1509
Sau3AI	GATC	6 cut(s)	380, 428, 555, 660, 697, 1236
Sau96I	GGNCC	5 cut(s)	437, 634, 1127, 1146, 1343
SchI	GAGTC	4 cut(s)	58, 145, 743, 867
SduI	GDGCHC	4 cut(s)	116, 520, 627, 1009
SexAI	ACCWGGT	1 cut(s)	754
SfaNI	GCATC	1 cut(s)	291
SinI	GGWCC	3 cut(s)	437, 1127, 1146
SmaI	CCCGGG	1 cut(s)	124
SmiMI	CAYNNNNRTG	5 cut(s)	218, 459, 578, 620, 690
SmlI	CTYRAG	1 cut(s)	1193
SmoI	CTYRAG	1 cut(s)	1193
SphI	GCATGC	3 cut(s)	458, 615, 1292
Sse9I	AATT	2 cut(s)	316, 849
SsiI	CCGC	8 cut(s)	181, 202, 288, 560, 628, 928, 988, 1178
SspI	AATATT	1 cut(s)	538
SspMI	CTAG	3 cut(s)	507, 530, 737
StyI	CCWWGG	3 cut(s)	105, 291, 685
TaaI	ACNGT	2 cut(s)	553, 1446
TaqI	TCGA	7 cut(s)	149, 234, 261, 417, 586, 672, 1449
TaqII	GACCGA	2 cut(s)	670, 1144
TasI	AATT	2 cut(s)	316, 849
TatI	WGTACW	2 cut(s)	411, 1350
TauI	GCSGC	2 cut(s)	290, 563
TfiI	GAWTC	4 cut(s)	16, 368, 984, 1183
Tru1I	TTAA	6 cut(s)	336, 375, 666, 918, 1037, 1194
Tru9I	TTAA	6 cut(s)	336, 375, 666, 918, 1037, 1194
TscAI	CASTG	2 cut(s)	652, 1342
TseFI	GTSAC	1 cut(s)	1440
TseI	GCWGC	5 cut(s)	128, 476, 770, 1505, 1508
Tsp45I	GTSAC	1 cut(s)	1440
TspDTI	ATGAA	6 cut(s)	43, 509, 883, 984, 1175, 1236
TspGWI	ACGGA	1 cut(s)	1428
TspMI	CCCGGG	1 cut(s)	122
TspRI	CASTG	2 cut(s)	652, 1342
Vha464I	CTTAAG	1 cut(s)	1193
VneI	GTGCAC	2 cut(s)	516, 1005
VpaK11BI	GGWCC	3 cut(s)	437, 1127, 1146
XagI	CCTNNNNNAGG	1 cut(s)	710
XapI	RAATTY	1 cut(s)	316
XbaI	TCTAGA	1 cut(s)	529
XceI	RCATGY	5 cut(s)	391, 458, 615, 1292, 1321
XmaI	CCCGGG	1 cut(s)	122
XmiI	GTMKAC	1 cut(s)	1428
XmnI	GAANNNNTTC	3 cut(s)	251, 582, 1251
XspI	CTAG	3 cut(s)	507, 530, 737
Zsp2I	ATGCAT	1 cut(s)	617

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.