Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0007694

Physical Location & Seq

Genomic Coordinates Forward (+)

36987362 .. 36992369

Gene Structure 5008 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1239700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGACAGCTGCTTTGTCTCACGCCTTGCTAAGCATTCCGTCATCTCGCAGTTGCCTTGGCCGAATCGGCAATCACAAGCTCTGCGTTTGGGGTTTCTCCAGTGAAAGAAGCGACTCTGGAATCGGAATTTCTAGGGCTTACAAGAGGAACCGTGATCGTCTCACCGGCCGCTGGAGTCTCAAATCACTCGACACCCACATTGGTGTCGAGACTGCTCCTCGCACCACGGTTGAAATCCCCGTCACCTGTTACCAGCTTATCGGCGTTCCTGCTAAAGCTGAGAAAGATGAGGTTGTTAAATCAGTGATGGAATTGAAGAGTGCTGAAATTGAAGAAGGCTACACTTTGGATACTGTTCGATCTCGCCTGGGTCTTTTAATGGATGTGAGAGATAAGCTTCTTTTTGAGCCAGAATACGCTGGTAATATTAAGGAAAACATCCCTCCTAAATCTTCCCTACGAGTTCCTTGGGCATGGTTGCCCGGTGCACTTTGCCTTCTTCAAGAGGTTGGGGAAGTTAAGCTTGTGCAAGATGTTGGCCGCGTGGCTGTTCAGCATCCAGATGCTAAGCCTTATATTCATGATCTTCTTCTATCTATGGCGCTAGCGGAGTGTGCAACTGCAAAGGTTGGTTTTGAGAAGAACAAGGTGTCCCAAGGTTTTGAAGCTCTAGCTCGTGCTCAGTGTCTTCTAAGGAGTAGAAAGTCTCTTGGGAAAATAGCATTGTTGTCTCAGATAGAAGAATCTTTGGAGGAGCTTGCACCTGCTTGTACGTTGGAATTGCTTGGCATGTCTCACTCACCTGAGAATGCTGAAAGAAGACGAGGAGCAATTGCAGCCTTGCGTGAATTGGTCAGACAGGGACTTGATGTGGAAACTTCATGCCGGGTCCAAGACTGGCCATGCTTCTTGACCCAAGCACTTAATAGACTAATGGCTTCAGAGATAGTTGATCTTCTTCCATGGGATGAGTTAGCTATTACAAGGAAGAATAAGAAATCACTTGAATCACAGAATCAACGGGTTGTAATTGATTTTAATTGTTTCTACACGGTGTTAATAGCTCACGTTGCACTGGGTTTTTCAAGCAAGCAAAAGGAATTAATTGAGAAAGGAAAATCTATATGTGAGTGCCTGATTGCATCAGAGGGTGCTGATCTGAAACTTGAGGAAGCTTTTTGCTTGTTCCTCCTTGGTCAGGTTGATGAGGCTGCGGTTGTTGAAAAGCTTCAGAAGCTGGACTTGAACTCAAATTCTGCTGCACGAAATTCAATCTTAGGGAAGGAAGTTAAGGATACTTGTGGTGCAACTCAATCTTTGGAAATGTGGCTGAAGGATGCTGTCCTTACTGTGTTTCCAGACTCACGAGATTGCCCTCCATCGTTGGCCAACTTTTTTGGTGGTGACAAGAGGACTCCTTTGAGCAAGAAAAGCAAAGTAGCTCCACAGAAGTTGCCTATCATAAGTCAAAGACCAATATCCACTGCTTTTGTGTCAGAACGGAGAGATTTCGATGAATCTTTTTCCCATATGAACTCTTCTCAACATCTTGGGACAGCTGTTAAGCAGTTGGCTCCAACTGATCTGCAAAGTCCCTTAATATTGGGCAAGACTGGCAGTGGAAGCAGTTCTGCATCATCTGTTCAATTGGAAAGGAATCTTGGCATGCACCGTGGTAAAGCTTGGGATGGTTGGTTTGCGAGAGGAGTTTTGGTGGGAAGAATCACTTTAGCTGGAGTATTGGGGTGCATTATTTTTGCGACCTTAAGGTTAACAGGCTTGAAGGGAAATGAGATGAGAAGTGCTTCCAAACGGGCCTCCAGTAAGCCAAATATGCACACAAGTTCTATTGCTTGGACAACAGTTTCATCTGCAGATTCTAATCTAGTCCCTGCTTATGTCAAGGGAAATGGACTAGCAGGCAGATTTAAGAAGCTTTTGGCGACTTTTATGAAGCCGGTGGGGACCTGCTCAGATGCCGGAAATCCACAAATTCTGGATCTGTCTTCTTCAACAGCTGTGTTCCGGAGGCTTATGTCTATTGAAGAAGCTGAATACCTTGTGAAGCAATGGCAAGCAATTAAGGCTGAAGCTCTGGGGCCCACTCATGAAATTCACAGCCTCTCTGAAATCCTTGATGACTCAATGCTTGTTCAGTGGCAGGCTTTGGCTGATGCTGCAAAGGCGAGGTCTTGTTATTGGAAGTTTGTCTTGCTACAACTGTCAGTCCTTGGTGCTGAAATTATATCAGATGAAGTTGGCGGGGAGAGAGCAGAGATCGAGGCTGTCGTAGAGGAAGCGGCTGAACTTGTTAATGAATCTGAACAAAGGAACCCAAGTTATTACAGCACCTATAAAATTTGGTATGTTCTAAGAAGGCAAGAAGACGGTTCGTGGAGGTTCTGTGAAGGGGAAGTTCAAGCACCATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010020 GO:0016020 GO:0016043 GO:0019866 GO:0031090 GO:0031967 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0043621 GO:0044422 GO:0044424 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko00020 ko00640 ko01100 ko01110 ko01120 ko01130 ko01200 map00020 map00640 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

DUF4101

Protein Analysis

811

Amino Acids

89.1

Weight (kDa)

7.47

Isoelectric Point (pI)

51.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Arm_PDR	PF25515	154 - 301	1.6e-46	Plastid division regulator ARM repeat
ARC6	PF23468	345 - 467	1.7e-09	Plastid division regulator alpha solenoid domain
ARC6-like_IMS	PF13355	684 - 801	3.3e-30	ARC6-like, IMS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007694)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19180 AT3G19180
fragaria_vesca	FvH4_5g18390 FvH4_5g18390 FvH4_5g18390
malus_domestica	MD06G1239700.v1.1 MD14G1245800.v1.1
prunus_persica	Prupe.5G243600_v2.0.a1
pyrus_communis	pycom06g21520 pycom14g20670
rosa_chinensis	RchiOBHm_Chr7g0177091
rosa_laevigata	RLG00000005557
rosa_multiflora	Rmu_co8345735.1_g000001 Rmu_sc0005310.1_g000023 Rmu_sc0005912.1_g000002
rosa_roxburghii	Rroxscaffold_3G00276100
rosa_rugosa	Rorug06G0403700
rosa_samantha	Rh7AG003100 Rh7BG003500 Rh7BG003600 Rh7CG002700 Rh7CG002800 Rh7DG003200
rosa_wichuraiana	Rw7G000260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	772
Acc36I	ACCTGC	2 cut(s)	772, 1976
AccII	CGCG	1 cut(s)	543
AccIII	TCCGGA	1 cut(s)	2025
AciI	CCGC	6 cut(s)	169, 541, 608, 1214, 2262, 2300
AclWI	GGATC	1 cut(s)	2007
AcoI	YGGCCR	5 cut(s)	58, 166, 538, 899, 1386
AcsI	RAATTY	6 cut(s)	126, 1252, 1267, 1992, 2112, 2358
AcuI	CTGAAG	4 cut(s)	924, 1214, 1352, 2109
AfaI	GTAC	1 cut(s)	772
AfiI	CCNNNNNNNGG	2 cut(s)	171, 1198
AflII	CTTAAG	1 cut(s)	1765
AjnI	CCWGG	1 cut(s)	366
AjuI	GAANNNNNNNTTGG	2 cut(s)	1644, 1676
AleI	CACNNNNGTG	1 cut(s)	201
AloI	GAACNNNNNNTCC	2 cut(s)	635, 667
Alw21I	GWGCWC	2 cut(s)	490, 682
Alw26I	GTCTC	7 cut(s)	21, 164, 182, 203, 711, 735, 798
Alw44I	GTGCAC	1 cut(s)	486
AlwI	GGATC	1 cut(s)	2007
AlwNI	CAGNNNCTG	1 cut(s)	1237
Aor13HI	TCCGGA	1 cut(s)	2025
AoxI	GGCC	7 cut(s)	58, 166, 538, 899, 1386, 1815, 2099
ApaI	GGGCCC	1 cut(s)	2103
ApaLI	GTGCAC	1 cut(s)	486
ApeKI	GCWGC	5 cut(s)	8, 836, 1211, 1259, 2177
ApoI	RAATTY	6 cut(s)	126, 1252, 1267, 1992, 2112, 2358
ArsI	GACNNNNNNTTYG	3 cut(s)	27, 2174, 2206
AseI	ATTAAT	1 cut(s)	1103
Asp700I	GAANNNNTTC	3 cut(s)	1227, 1627, 1804
AspLEI	GCGC	1 cut(s)	604
AspS9I	GGNCC	5 cut(s)	889, 1815, 1965, 2099, 2100
AsuC2I	CCSGG	2 cut(s)	483, 887
AsuHPI	GGTGA	4 cut(s)	154, 235, 792, 1415
AsuNHI	GCTAGC	1 cut(s)	604
AvaII	GGWCC	2 cut(s)	889, 1965
BaeGI	GKGCMC	2 cut(s)	490, 2103
BalI	TGGCCA	2 cut(s)	901, 1388
BanII	GRGCYC	1 cut(s)	2103
BauI	CACGAG	2 cut(s)	675, 1365
BbsI	GAAGAC	4 cut(s)	680, 826, 1998, 2391
Bbv12I	GWGCWC	2 cut(s)	490, 682
BbvI	GCAGC	4 cut(s)	848, 1198, 1246, 2164
BccI	CCATC	3 cut(s)	301, 1387, 1682
BciT130I	CCWGG	1 cut(s)	368
BciVI	GTATCC	2 cut(s)	343, 1288
BcnI	CCSGG	2 cut(s)	483, 887
BcoDI	GTCTC	7 cut(s)	21, 164, 182, 203, 711, 735, 798
BfaI	CTAG	5 cut(s)	132, 605, 671, 1886, 1916
BfmI	CTRYAG	1 cut(s)	1872
BfoI	RGCGCY	1 cut(s)	605
BfrI	CTTAAG	1 cut(s)	1765
BfuAI	ACCTGC	2 cut(s)	772, 1976
BfuI	GTATCC	2 cut(s)	343, 1288
BglI	GCCNNNNNGGC	1 cut(s)	66
BisI	GCNGC	8 cut(s)	9, 169, 541, 837, 1212, 1260, 2178, 2301
BlpI	GCTNAGC	2 cut(s)	29, 567
BlsI	GCNGC	8 cut(s)	10, 170, 542, 838, 1213, 1261, 2179, 2302
Bme1390I	CCNGG	3 cut(s)	368, 483, 887
Bme18I	GGWCC	2 cut(s)	889, 1965
BmgT120I	GGNCC	5 cut(s)	889, 1815, 1965, 2099, 2100
BmiI	GGNNCC	7 cut(s)	149, 890, 1575, 1966, 2100, 2101, 2333
BmrFI	CCNGG	3 cut(s)	368, 483, 887
BmrI	ACTGGG	1 cut(s)	1085
BmsI	GCATC	7 cut(s)	553, 565, 1151, 1327, 1643, 1966, 2164
BmtI	GCTAGC	1 cut(s)	608
BmuI	ACTGGG	1 cut(s)	1085
BpiI	GAAGAC	4 cut(s)	680, 826, 1998, 2391
BpmI	CTGGAG	4 cut(s)	82, 193, 1755, 1804
Bpu1102I	GCTNAGC	2 cut(s)	29, 567
BpuEI	CTTGAG	1 cut(s)	1187
BpuMI	CCSGG	2 cut(s)	483, 887
BsaBI	GATNNNNATC	1 cut(s)	1881
BsaJI	CCNNGG	9 cut(s)	55, 225, 367, 467, 655, 962, 1192, 1672, 2230
BsaWI	WCCGGW	1 cut(s)	2025
BsaXI	ACNNNNNCTCC	4 cut(s)	1698, 1728, 2389, 2419
Bsc4I	CCNNNNNNNGG	2 cut(s)	171, 1198
Bse118I	RCCGGY	2 cut(s)	164, 1957
Bse1I	ACTGG	5 cut(s)	99, 902, 1080, 1618, 1821
Bse3DI	GCAATG	1 cut(s)	2075
Bse8I	GATNNNNATC	1 cut(s)	1881
BseAI	TCCGGA	1 cut(s)	2025
BseBI	CCWGG	1 cut(s)	368
BseDI	CCNNGG	9 cut(s)	55, 225, 367, 467, 655, 962, 1192, 1672, 2230
BseGI	GGATG	6 cut(s)	388, 438, 556, 973, 1342, 1693
BseJI	GATNNNNATC	1 cut(s)	1881
BseLI	CCNNNNNNNGG	2 cut(s)	171, 1198
BseMI	GCAATG	1 cut(s)	2075
BseMII	CTCAG	5 cut(s)	270, 695, 746, 795, 1986
BseNI	ACTGG	5 cut(s)	99, 902, 1080, 1618, 1821
BseRI	GAGGAG	4 cut(s)	207, 767, 840, 1719
BseSI	GKGCMC	2 cut(s)	490, 2103
BseX3I	CGGCCG	1 cut(s)	166
BseXI	GCAGC	4 cut(s)	848, 1198, 1246, 2164
BsgI	GTGCAG	1 cut(s)	1245
Bsh1236I	CGCG	1 cut(s)	543
Bsh1285I	CGRYCG	1 cut(s)	169
BshFI	GGCC	7 cut(s)	60, 168, 540, 901, 1388, 1817, 2101
BsiEI	CGRYCG	1 cut(s)	169
BsiHKAI	GWGCWC	2 cut(s)	490, 682
BsiSI	CCGG	6 cut(s)	165, 483, 886, 1958, 1980, 2026
BslFI	GGGAC	6 cut(s)	637, 876, 1567, 1578, 1874, 1978
BslI	CCNNNNNNNGG	2 cut(s)	171, 1198
BsmAI	GTCTC	7 cut(s)	21, 164, 182, 203, 711, 735, 798
BsmBI	CGTCTC	1 cut(s)	164
BsmFI	GGGAC	6 cut(s)	637, 876, 1567, 1578, 1874, 1978
BsmI	GAATGC	2 cut(s)	33, 814
BsnI	GGCC	7 cut(s)	60, 168, 540, 901, 1388, 1817, 2101
Bsp120I	GGGCCC	1 cut(s)	2099
Bsp1286I	GDGCHC	3 cut(s)	490, 682, 2103
Bsp13I	TCCGGA	1 cut(s)	2025
Bsp143I	GATC	8 cut(s)	154, 359, 583, 952, 1156, 1582, 1999, 2277
Bsp1720I	GCTNAGC	2 cut(s)	29, 567
Bsp19I	CCATGG	1 cut(s)	962
BspACI	CCGC	6 cut(s)	169, 541, 608, 1214, 2262, 2300
BspANI	GGCC	7 cut(s)	60, 168, 540, 901, 1388, 1817, 2101
BspCNI	CTCAG	5 cut(s)	271, 694, 745, 796, 1985
BspEI	TCCGGA	1 cut(s)	2025
BspFNI	CGCG	1 cut(s)	543
BspHI	TCATGA	2 cut(s)	580, 2107
BspLI	GGNNCC	7 cut(s)	149, 890, 1575, 1966, 2100, 2101, 2333
BspMAI	CTGCAG	1 cut(s)	1876
BspMI	ACCTGC	2 cut(s)	772, 1976
BspOI	GCTAGC	1 cut(s)	608
BspPI	GGATC	1 cut(s)	2007
BspTI	CTTAAG	1 cut(s)	1765
BsrDI	GCAATG	1 cut(s)	2075
BsrFI	RCCGGY	2 cut(s)	164, 1957
BsrI	ACTGG	5 cut(s)	99, 902, 1080, 1618, 1821
BssAI	RCCGGY	2 cut(s)	164, 1957
BssECI	CCNNGG	9 cut(s)	55, 225, 367, 467, 655, 962, 1192, 1672, 2230
BssMI	GATC	8 cut(s)	154, 359, 583, 952, 1156, 1582, 1999, 2277
BssSI	CACGAG	2 cut(s)	675, 1365
BssT1I	CCWWGG	6 cut(s)	55, 467, 655, 962, 1192, 2230
Bst2BI	CACGAG	2 cut(s)	675, 1365
Bst2UI	CCWGG	1 cut(s)	368
Bst4CI	ACNGT	9 cut(s)	152, 229, 355, 1054, 1351, 1673, 1864, 2223, 2390
Bst6I	CTCTTC	2 cut(s)	311, 1543
BstAFI	CTTAAG	1 cut(s)	1765
BstC8I	GCNNGC	7 cut(s)	606, 759, 1091, 1667, 1921, 2076, 2163
BstDSI	CCRYGG	3 cut(s)	225, 962, 1672
BstENI	CCTNNNNNAGG	1 cut(s)	1196
BstF5I	GGATG	6 cut(s)	388, 438, 556, 973, 1342, 1693
BstFNI	CGCG	1 cut(s)	543
BstH2I	RGCGCY	1 cut(s)	605
BstHHI	GCGC	1 cut(s)	604
BstKTI	GATC	8 cut(s)	157, 362, 586, 955, 1159, 1585, 2002, 2280
BstMAI	GTCTC	7 cut(s)	21, 164, 182, 203, 711, 735, 798
BstMBI	GATC	8 cut(s)	154, 359, 583, 952, 1156, 1582, 1999, 2277
BstMCI	CGRYCG	1 cut(s)	169
BstNI	CCWGG	1 cut(s)	368
BstNSI	RCATGY	2 cut(s)	793, 1669
BstSCI	CCNGG	3 cut(s)	366, 481, 885
BstSFI	CTRYAG	1 cut(s)	1872
BstSLI	GKGCMC	2 cut(s)	490, 2103
BstUI	CGCG	1 cut(s)	543
BstV1I	GCAGC	4 cut(s)	848, 1198, 1246, 2164
BstV2I	GAAGAC	4 cut(s)	680, 826, 1998, 2391
BstX2I	RGATCY	1 cut(s)	1999
BstYI	RGATCY	1 cut(s)	1999
BstZI	CGGCCG	1 cut(s)	166
BsuI	GTATCC	2 cut(s)	343, 1288
BsuRI	GGCC	7 cut(s)	60, 168, 540, 901, 1388, 1817, 2101
BtgI	CCRYGG	3 cut(s)	225, 962, 1672
BtsCI	GGATG	6 cut(s)	388, 438, 556, 973, 1342, 1693
BtsI	GCAGTG	2 cut(s)	1482, 1624
BtsIMutI	CAGTG	7 cut(s)	106, 309, 689, 1073, 1482, 1624, 2162
BveI	ACCTGC	2 cut(s)	772, 1976
Cac8I	GCNNGC	7 cut(s)	606, 759, 1091, 1667, 1921, 2076, 2163
CaiI	CAGNNNCTG	1 cut(s)	1237
CciI	TCATGA	2 cut(s)	580, 2107
CfoI	GCGC	1 cut(s)	604
Cfr10I	RCCGGY	2 cut(s)	164, 1957
Cfr13I	GGNCC	5 cut(s)	889, 1815, 1965, 2099, 2100
Csp6I	GTAC	1 cut(s)	771
CspCI	CAANNNNNGTGG	4 cut(s)	1434, 1469, 1471, 1506
CviAII	CATG	8 cut(s)	474, 581, 790, 882, 903, 963, 1666, 2108
CviQI	GTAC	1 cut(s)	771
DpnI	GATC	8 cut(s)	156, 361, 585, 954, 1158, 1584, 2001, 2279
DpnII	GATC	8 cut(s)	154, 359, 583, 952, 1156, 1582, 1999, 2277
EaeI	YGGCCR	5 cut(s)	58, 166, 538, 899, 1386
EagI	CGGCCG	1 cut(s)	166
Eam1104I	CTCTTC	2 cut(s)	311, 1543
EarI	CTCTTC	2 cut(s)	311, 1543
EclXI	CGGCCG	1 cut(s)	166
Eco130I	CCWWGG	6 cut(s)	55, 467, 655, 962, 1192, 2230
Eco24I	GRGCYC	1 cut(s)	2103
Eco47I	GGWCC	2 cut(s)	889, 1965
Eco52I	CGGCCG	1 cut(s)	166
Eco57I	CTGAAG	4 cut(s)	924, 1214, 1352, 2109
EcoNI	CCTNNNNNAGG	1 cut(s)	1196
EcoO109I	RGGNCCY	2 cut(s)	1965, 2099
EcoRII	CCWGG	1 cut(s)	366
EcoT14I	CCWWGG	6 cut(s)	55, 467, 655, 962, 1192, 2230
EcoT38I	GRGCYC	1 cut(s)	2103
ErhI	CCWWGG	6 cut(s)	55, 467, 655, 962, 1192, 2230
Esp3I	CGTCTC	1 cut(s)	164
FaeI	CATG	8 cut(s)	477, 584, 793, 885, 906, 966, 1669, 2111
FalI	AAGNNNNNCTT	8 cut(s)	507, 539, 1226, 1258, 1711, 1743, 2195, 2227
FaqI	GGGAC	6 cut(s)	637, 876, 1567, 1578, 1874, 1978
FatI	CATG	8 cut(s)	473, 580, 789, 881, 902, 962, 1665, 2107
FauI	CCCGC	1 cut(s)	2255
FauNDI	CATATG	1 cut(s)	1530
Fnu4HI	GCNGC	8 cut(s)	9, 169, 541, 837, 1212, 1260, 2178, 2301
FokI	GGATG	6 cut(s)	395, 425, 543, 980, 1349, 1700
FriOI	GRGCYC	1 cut(s)	2103
Fsp4HI	GCNGC	8 cut(s)	9, 169, 541, 837, 1212, 1260, 2178, 2301
FspBI	CTAG	5 cut(s)	132, 605, 671, 1886, 1916
GlaI	GCGC	1 cut(s)	603
GluI	GCNGC	8 cut(s)	9, 169, 541, 837, 1212, 1260, 2178, 2301
GsuI	CTGGAG	4 cut(s)	82, 193, 1755, 1804
HaeII	RGCGCY	1 cut(s)	605
HaeIII	GGCC	7 cut(s)	60, 168, 540, 901, 1388, 1817, 2101
HapII	CCGG	6 cut(s)	165, 483, 886, 1958, 1980, 2026
HhaI	GCGC	1 cut(s)	604
Hin1II	CATG	8 cut(s)	477, 584, 793, 885, 906, 966, 1669, 2111
Hin6I	GCGC	1 cut(s)	602
HinP1I	GCGC	1 cut(s)	602
HincII	GTYRAC	1 cut(s)	1773
HindII	GTYRAC	1 cut(s)	1773
HindIII	AAGCTT	6 cut(s)	395, 521, 1173, 1226, 1680, 1934
HpaI	GTTAAC	1 cut(s)	1773
HpaII	CCGG	6 cut(s)	165, 483, 886, 1958, 1980, 2026
HphI	GGTGA	4 cut(s)	154, 235, 792, 1415
Hpy166II	GTNNAC	2 cut(s)	488, 1773
Hpy8I	GTNNAC	2 cut(s)	488, 1773
HpyAV	CCTTC	7 cut(s)	329, 506, 1276, 1327, 1777, 2370, 2402
HpyCH4III	ACNGT	9 cut(s)	152, 229, 355, 1054, 1351, 1673, 1864, 2223, 2390
HpyCH4IV	ACGT	2 cut(s)	773, 1068
HpySE526I	ACGT	2 cut(s)	773, 1068
Hsp92II	CATG	8 cut(s)	477, 584, 793, 885, 906, 966, 1669, 2111
HspAI	GCGC	1 cut(s)	602
Kpn2I	TCCGGA	1 cut(s)	2025
KspAI	GTTAAC	1 cut(s)	1773
Kzo9I	GATC	8 cut(s)	154, 359, 583, 952, 1156, 1582, 1999, 2277
LmnI	GCTCC	5 cut(s)	220, 754, 827, 1447, 1579
Lsp1109I	GCAGC	4 cut(s)	848, 1198, 1246, 2164
LweI	GCATC	7 cut(s)	553, 565, 1151, 1327, 1643, 1966, 2164
MaeI	CTAG	5 cut(s)	132, 605, 671, 1886, 1916
MaeII	ACGT	2 cut(s)	773, 1068
MaeIII	GTNAC	3 cut(s)	241, 248, 1403
MalI	GATC	8 cut(s)	156, 361, 585, 954, 1158, 1584, 2001, 2279
MboI	GATC	8 cut(s)	154, 359, 583, 952, 1156, 1582, 1999, 2277
MfeI	CAATTG	2 cut(s)	831, 1646
MflI	RGATCY	1 cut(s)	1999
MhlI	GDGCHC	3 cut(s)	490, 682, 2103
MlsI	TGGCCA	2 cut(s)	901, 1388
MluNI	TGGCCA	2 cut(s)	901, 1388
MlyI	GAGTC	5 cut(s)	107, 184, 1355, 1408, 2135
MmeI	TCCRAC	2 cut(s)	756, 1601
Mox20I	TGGCCA	2 cut(s)	901, 1388
MroI	TCCGGA	1 cut(s)	2025
MroXI	GAANNNNTTC	3 cut(s)	1227, 1627, 1804
MscI	TGGCCA	2 cut(s)	901, 1388
MslI	CAYNNNNRTG	2 cut(s)	201, 561
Msp20I	TGGCCA	2 cut(s)	901, 1388
MspA1I	CMGCKG	4 cut(s)	8, 171, 1559, 2018
MspCI	CTTAAG	1 cut(s)	1765
MspI	CCGG	6 cut(s)	165, 483, 886, 1958, 1980, 2026
MspR9I	CCNGG	3 cut(s)	368, 483, 887
MunI	CAATTG	2 cut(s)	831, 1646
Mva1269I	GAATGC	2 cut(s)	33, 814
MvaI	CCWGG	1 cut(s)	368
MvnI	CGCG	1 cut(s)	543
NciI	CCSGG	2 cut(s)	483, 887
NcoI	CCATGG	1 cut(s)	962
NdeI	CATATG	1 cut(s)	1530
NdeII	GATC	8 cut(s)	154, 359, 583, 952, 1156, 1582, 1999, 2277
NheI	GCTAGC	1 cut(s)	604
NlaIII	CATG	8 cut(s)	477, 584, 793, 885, 906, 966, 1669, 2111
NlaIV	GGNNCC	7 cut(s)	149, 890, 1575, 1966, 2100, 2101, 2333
NmuCI	GTSAC	2 cut(s)	241, 1403
NspI	RCATGY	2 cut(s)	793, 1669
OliI	CACNNNNGTG	1 cut(s)	201
PaeI	GCATGC	1 cut(s)	1669
PagI	TCATGA	2 cut(s)	580, 2107
PaqCI	CACCTGC	1 cut(s)	772
PcsI	WCGNNNNNNNCGW	1 cut(s)	2286
PctI	GAATGC	2 cut(s)	33, 814
PdmI	GAANNNNTTC	3 cut(s)	1227, 1627, 1804
PkrI	GCNGC	8 cut(s)	10, 170, 542, 838, 1213, 1261, 2179, 2302
PleI	GAGTC	5 cut(s)	107, 183, 1355, 1408, 2135
PpsI	GAGTC	5 cut(s)	107, 183, 1355, 1408, 2135
PpuMI	RGGWCCY	1 cut(s)	1965
PshBI	ATTAAT	1 cut(s)	1103
Psp5II	RGGWCCY	1 cut(s)	1965
Psp6I	CCWGG	1 cut(s)	366
PspGI	CCWGG	1 cut(s)	366
PspN4I	GGNNCC	7 cut(s)	149, 890, 1575, 1966, 2100, 2101, 2333
PspOMI	GGGCCC	1 cut(s)	2099
PspPI	GGNCC	5 cut(s)	889, 1815, 1965, 2099, 2100
PspPPI	RGGWCCY	1 cut(s)	1965
PstI	CTGCAG	1 cut(s)	1876
PstNI	CAGNNNCTG	1 cut(s)	1237
PsuI	RGATCY	1 cut(s)	1999
PvuII	CAGCTG	3 cut(s)	8, 1559, 2018
RsaI	GTAC	1 cut(s)	772
RsaNI	GTAC	1 cut(s)	771
RseI	CAYNNNNRTG	2 cut(s)	201, 561
SatI	GCNGC	8 cut(s)	9, 169, 541, 837, 1212, 1260, 2178, 2301
Sau3AI	GATC	8 cut(s)	154, 359, 583, 952, 1156, 1582, 1999, 2277
Sau96I	GGNCC	5 cut(s)	889, 1815, 1965, 2099, 2100
SchI	GAGTC	5 cut(s)	107, 184, 1355, 1408, 2135
ScrFI	CCNGG	3 cut(s)	368, 483, 887
SduI	GDGCHC	3 cut(s)	490, 682, 2103
SfaNI	GCATC	7 cut(s)	553, 565, 1151, 1327, 1643, 1966, 2164
SfcI	CTRYAG	1 cut(s)	1872
SinI	GGWCC	2 cut(s)	889, 1965
SmiMI	CAYNNNNRTG	2 cut(s)	201, 561
SmlI	CTYRAG	2 cut(s)	1166, 1765
SmoI	CTYRAG	2 cut(s)	1166, 1765
SphI	GCATGC	1 cut(s)	1669
SsiI	CCGC	6 cut(s)	169, 541, 608, 1214, 2262, 2300
SspI	AATATT	2 cut(s)	427, 1602
SspMI	CTAG	5 cut(s)	132, 605, 671, 1886, 1916
StyD4I	CCNGG	3 cut(s)	366, 481, 885
StyI	CCWWGG	6 cut(s)	55, 467, 655, 962, 1192, 2230
TaaI	ACNGT	9 cut(s)	152, 229, 355, 1054, 1351, 1673, 1864, 2223, 2390
TaiI	ACGT	2 cut(s)	776, 1071
TaqI	TCGA	5 cut(s)	189, 207, 358, 1512, 2280
TauI	GCSGC	3 cut(s)	171, 543, 2303
TscAI	CASTG	7 cut(s)	106, 309, 689, 1080, 1489, 1624, 2162
TseFI	GTSAC	2 cut(s)	241, 1403
TseI	GCWGC	5 cut(s)	8, 836, 1211, 1259, 2177
Tsp45I	GTSAC	2 cut(s)	241, 1403
TspDTI	ATGAA	9 cut(s)	569, 870, 1530, 1547, 1857, 1967, 2124, 2268, 2331
TspGWI	ACGGA	2 cut(s)	27, 1516
TspRI	CASTG	7 cut(s)	106, 309, 689, 1080, 1489, 1624, 2162
Vha464I	CTTAAG	1 cut(s)	1765
VneI	GTGCAC	1 cut(s)	486
VpaK11BI	GGWCC	2 cut(s)	889, 1965
VspI	ATTAAT	1 cut(s)	1103
XagI	CCTNNNNNAGG	1 cut(s)	1196
XapI	RAATTY	6 cut(s)	126, 1252, 1267, 1992, 2112, 2358
XceI	RCATGY	2 cut(s)	793, 1669
XmnI	GAANNNNTTC	3 cut(s)	1227, 1627, 1804
XspI	CTAG	5 cut(s)	132, 605, 671, 1886, 1916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.