Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0007694

Physical Location & Seq

Genomic Coordinates Reverse (-)

32360810 .. 32365952

Gene Structure 5143 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1245800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2460 bp

ATGGTTGGTGCTCTGTCTCACGCCTTGCCAGGCATTCCGTCTTGTTGTTGCCTTTGCCGAATCGATAATCACAAGGAAGATGGCAAGCTCTGCGTTTGGGGTTTCTCCACCTCCAGAGAAAGAAGCGACTCTGGAATCGGAATTGTTCGGGTTTACAAGAGGAGCCTCTTGGGTGACAACCTCACCGGGCGCTGGACTCTCAACGCACTCGACACCCACATTGGTGTCGAGACTGCTCCTCGTCACACCACCGTTGAAATCCCCGTCACCTGTTACCAGCTTATTGGCGTTCCTGCTAAGGCTGAGAAAGATGAGGTTGTTAAATCAGTGATGGAATTGAAGAGTGCCGAAATTGAAGAAGGCTACACTTTGGATACAGTCCGATCTCGCTTGTGTCTCTTAACGGATGTGAGAGATAAGCTTCTTTTTGAACCAGAATACGCTGGCAATATTAAGGAAGAGATCCCACCTAAATCTTCCCTACGAATTCCTTGGGCATGGTTGCCGGGTGCTCTTTGCCTTCTTCAAGAGGTTGGGGAAATTAAGCTTGTGCAAGATGTTGGCCGCGTGGCTGTTCAGCATCCAGATGCTAAGCAGTATATTCATGATCTTCTTCTTTCTATGGCATTAGCGGAGTGTGCAACTGCAAAGGTTGGTTTTGAGAAGAACAAGGTGTCCCAAGGATTTGAAGCTCTAGCTCGCTCTCAGTGTCTTCTAAGGAGTAGAAAGTCTCTTGGTAAAATAGCATTGTTGTCTCAGATAGAAGAATCTTTGGAGGAGCTTGCACCTGCCTGTACATTGGAATTGCTTGGCATGTCTCACTCACCTGAGAATGCGGAACGAAGACGAGGAGCAATTGCAGCCTTGCGTGAATTGGTCAGGCAGGGACTTGATGTGGAAACTTCATGCCGGGTTCAAGACTGGCCATGCTTCTTGACCCAAGCACTGAATAGACTAACGGCTTCAGAGATAGTTGATCTTCTTCCATGGGATGACTTAGCTATTACAAGGAAGAACAAGAAATCACTTGAATCGCAGAATCAACGGGTTGTAATTGATTTTAATTGTTTCTACATGGTATTAACAGCTCATGTTGCACTGGGTTTTTCAAGCAAGCAAAAGGAATTGATTGAGAAAGCAAAATCTGTATGTGACTGCCTGATTGCATCAGAGGGTGCTGATCTGAAACTTGAGGAAGCTTTTTGCTGGTTCCTTCTTGGTCAGGGTGATGAGGCTGCGGTTGTTGAAAAGCTTCAGAAGCTGGAGTTGAACTCAAATTCTGCTGCACGAAATTCAATCTTAGGGAAGGAAGTTAAGGATACTTGTGGTGCAACTCAATCATTGGAAATGTGGCTGAAGGATGCTGTCCTTGCTGTGTTTCCAGATTCACGAGATTGCCCTCCATCGTTGGCCAACTTTTTTGGTGGTGACAAGAGAACTCCTCTGAGCAAGAAAAGCAAAGTAGCTCCACAGAATTTGCCTATCATAAGTCAAAGACCAATGTCCGCTGCTTTTGTTTCAGAACGGAGAGATTTTGATAAATCTTTTTCCCATATGAACTCTTCTCAATATCTTGGAACAGCTGTTAAGCAGTTGGCTCCAACTGATCTGCGAAGTCCCTTGATATTGGGCAAGACTGGCAGTGGAACCAGTGCCAATGCATCATCAGTTCAATTGGAAAGGAATCTTGGCATGGACCGCAGTAAAGTTTGGGATGGTTGGTTTGCGAGAGGAGTTTTGGTTGGAAGGATCACTTTAGTTGGAGTACTGGGGTGCATTGTTTTTGCTACCTTAAGATTAACAGGATTGAAGGGAAATGTGATGAGAAGTGCTTCTCAACAGGCCTCCAGTAAGCGAAATATGCACACAAGTTCTATTGCTTGGACAACAAATCCATCTGCGGATTCTAATCTAGTCCCTGCTTATATCAAGGGGAATGGACTAGCTGGCAGATTTAAGAAGCTTTTGGTGACTTTTATGAAGCCGGTGGGGACCTTCTCAGATGCTGGAAATCGGCAGATTCCGTATTTGTCCTCTTCAACGGCTGTGCTTCGGAGACTTATGTCTATTGAAGAAGCTAAAGACCTTGTGAAGCAATGGCAAGCAATTAAAGCTGAAGCTCTGGGGCCCACTCATGAAGTTCACAGCCTCTCTGAAATCCTTGATGACTCAATGCTTGTTCAGTGGCAGGCTTTGGCTGATGCTGCAAAAGCAAGGTCTTGTTATTGGAAGTTTGTCTTGCTACAACTGTCTGTCCTACGTGCTGAGATTTTATCAGATGAAGTTGGAGGGGAAACAGCAGAGGTTGAGGCTGTCGTAGAGGAAGCGGCTGAACTTGTTAATGAATCTGAGCAAAAGAACCCAAGTTATTACAGCACCTATAAAATTTGGTATGTTCTAAGAAGGCAAGAAGACGGTTCGTGGAGGTTCTGTGAAGGGGAAGTGCAGACACCATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010020 GO:0016020 GO:0016043 GO:0019866 GO:0031090 GO:0031967 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0043621 GO:0044422 GO:0044424 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko00020 ko00640 ko01100 ko01110 ko01120 ko01130 ko01200 map00020 map00640 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

DUF4101

Protein Analysis

820

Amino Acids

90.33

Weight (kDa)

6.87

Isoelectric Point (pI)

50.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Arm_PDR	PF25515	162 - 309	9.4e-46	Plastid division regulator ARM repeat
ARC6	PF23468	354 - 475	1.7e-09	Plastid division regulator alpha solenoid domain
ARC6-like_IMS	PF13355	693 - 810	4.4e-30	ARC6-like, IMS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007694)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19180 AT3G19180
fragaria_vesca	FvH4_5g18390 FvH4_5g18390 FvH4_5g18390
malus_domestica	MD06G1239700.v1.1 MD14G1245800.v1.1
prunus_persica	Prupe.5G243600_v2.0.a1
pyrus_communis	pycom06g21520 pycom14g20670
rosa_chinensis	RchiOBHm_Chr7g0177091
rosa_laevigata	RLG00000005557
rosa_multiflora	Rmu_co8345735.1_g000001 Rmu_sc0005310.1_g000023 Rmu_sc0005912.1_g000002
rosa_roxburghii	Rroxscaffold_3G00276100
rosa_rugosa	Rorug06G0403700
rosa_samantha	Rh7AG003100 Rh7BG003500 Rh7BG003600 Rh7CG002700 Rh7CG002800 Rh7DG003200
rosa_wichuraiana	Rw7G000260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	796
Acc36I	ACCTGC	1 cut(s)	796
AccII	CGCG	1 cut(s)	567
AciI	CCGC	8 cut(s)	565, 632, 836, 1238, 1506, 1699, 1901, 2327
AclWI	GGATC	2 cut(s)	457, 1757
AcoI	YGGCCR	3 cut(s)	562, 923, 1410
AcsI	RAATTY	5 cut(s)	486, 1276, 1291, 1474, 2385
AcuI	CTGAAG	4 cut(s)	948, 1238, 1376, 2136
AfaI	GTAC	2 cut(s)	796, 1767
AfiI	CCNNNNNNNGG	1 cut(s)	192
AflII	CTTAAG	1 cut(s)	1792
AjnI	CCWGG	1 cut(s)	28
AjuI	GAANNNNNNNTTGG	2 cut(s)	1671, 1703
AleI	CACNNNNGTG	1 cut(s)	222
AloI	GAACNNNNNNTCC	2 cut(s)	659, 691
Alw21I	GWGCWC	2 cut(s)	13, 514
Alw26I	GTCTC	7 cut(s)	21, 224, 401, 735, 759, 822, 2050
AlwI	GGATC	2 cut(s)	457, 1757
AlwNI	CAGNNNCTG	2 cut(s)	1261, 2006
AoxI	GGCC	5 cut(s)	562, 923, 1410, 1842, 2126
ApaI	GGGCCC	1 cut(s)	2130
ApeKI	GCWGC	5 cut(s)	860, 1235, 1283, 1508, 2204
ApoI	RAATTY	5 cut(s)	486, 1276, 1291, 1474, 2385
ArsI	GACNNNNNNTTYG	2 cut(s)	2201, 2233
Asp700I	GAANNNNTTC	2 cut(s)	1251, 1831
AspLEI	GCGC	1 cut(s)	192
AspS9I	GGNCC	4 cut(s)	1696, 1992, 2126, 2127
AsuC2I	CCSGG	3 cut(s)	187, 507, 911
AsuHPI	GGTGA	7 cut(s)	175, 185, 259, 816, 1238, 1439, 1981
AvaII	GGWCC	2 cut(s)	1696, 1992
BaeGI	GKGCMC	1 cut(s)	2130
BalI	TGGCCA	2 cut(s)	925, 1412
BanII	GRGCYC	1 cut(s)	2130
BauI	CACGAG	1 cut(s)	1389
BbsI	GAAGAC	3 cut(s)	704, 850, 2418
Bbv12I	GWGCWC	2 cut(s)	13, 514
BbvI	GCAGC	5 cut(s)	872, 1222, 1270, 1495, 2191
BccI	CCATC	5 cut(s)	74, 325, 1411, 1709, 1903
BceAI	ACGGC	2 cut(s)	975, 2058
BciT130I	CCWGG	1 cut(s)	30
BciVI	GTATCC	2 cut(s)	367, 1312
BcnI	CCSGG	3 cut(s)	187, 507, 911
BcoDI	GTCTC	7 cut(s)	21, 224, 401, 735, 759, 822, 2050
BfaI	CTAG	3 cut(s)	695, 1913, 1943
BfoI	RGCGCY	1 cut(s)	193
BfrI	CTTAAG	1 cut(s)	1792
BfuAI	ACCTGC	1 cut(s)	796
BfuI	GTATCC	2 cut(s)	367, 1312
BisI	GCNGC	7 cut(s)	565, 861, 1236, 1284, 1509, 2205, 2328
BlpI	GCTNAGC	1 cut(s)	591
BlsI	GCNGC	7 cut(s)	566, 862, 1237, 1285, 1510, 2206, 2329
BmcAI	AGTACT	1 cut(s)	1767
Bme1390I	CCNGG	4 cut(s)	30, 187, 507, 911
Bme18I	GGWCC	2 cut(s)	1696, 1992
BmgT120I	GGNCC	4 cut(s)	1696, 1992, 2126, 2127
BmiI	GGNNCC	7 cut(s)	164, 1211, 1599, 1648, 1993, 2127, 2128
BmrFI	CCNGG	4 cut(s)	30, 187, 507, 911
BmrI	ACTGGG	2 cut(s)	1109, 1778
BmsI	GCATC	7 cut(s)	577, 589, 1175, 1351, 1670, 1993, 2191
BmuI	ACTGGG	2 cut(s)	1109, 1778
BoxI	GACNNNNGTC	2 cut(s)	1501, 2062
BpiI	GAAGAC	3 cut(s)	704, 850, 2418
BplI	GAGNNNNNCTC	4 cut(s)	1256, 1288, 1426, 1458
BpmI	CTGGAG	3 cut(s)	97, 1283, 1831
Bpu10I	CCTNAGC	1 cut(s)	297
Bpu1102I	GCTNAGC	1 cut(s)	591
BpuEI	CTTGAG	1 cut(s)	1211
BpuMI	CCSGG	3 cut(s)	187, 507, 911
Bsa29I	ATCGAT	1 cut(s)	63
BsaAI	YACGTR	1 cut(s)	2261
BsaBI	GATNNNNATC	1 cut(s)	1908
BsaJI	CCNNGG	3 cut(s)	491, 679, 986
BsaXI	ACNNNNNCTCC	4 cut(s)	1725, 1755, 2416, 2446
Bsc4I	CCNNNNNNNGG	1 cut(s)	192
Bse118I	RCCGGY	1 cut(s)	1984
Bse1I	ACTGG	6 cut(s)	926, 1104, 1642, 1650, 1773, 1848
Bse3DI	GCAATG	1 cut(s)	2102
Bse8I	GATNNNNATC	1 cut(s)	1908
BseBI	CCWGG	1 cut(s)	30
BseCI	ATCGAT	1 cut(s)	63
BseDI	CCNNGG	3 cut(s)	491, 679, 986
BseGI	GGATG	5 cut(s)	412, 580, 997, 1366, 1720
BseJI	GATNNNNATC	1 cut(s)	1908
BseLI	CCNNNNNNNGG	1 cut(s)	192
BseMI	GCAATG	1 cut(s)	2102
BseMII	CTCAG	8 cut(s)	294, 719, 770, 819, 1436, 2013, 2256, 2340
BseNI	ACTGG	6 cut(s)	926, 1104, 1642, 1650, 1773, 1848
BseRI	GAGGAG	6 cut(s)	175, 228, 791, 864, 1431, 1746
BseSI	GKGCMC	1 cut(s)	2130
BseXI	GCAGC	5 cut(s)	872, 1222, 1270, 1495, 2191
BsgI	GTGCAG	1 cut(s)	1269
Bsh1236I	CGCG	1 cut(s)	567
BshFI	GGCC	5 cut(s)	564, 925, 1412, 1844, 2128
BshVI	ATCGAT	1 cut(s)	63
BsiHKAI	GWGCWC	2 cut(s)	13, 514
BsiSI	CCGG	4 cut(s)	186, 506, 910, 1985
BslFI	GGGAC	5 cut(s)	661, 900, 1602, 1901, 2005
BslI	CCNNNNNNNGG	1 cut(s)	192
BsmAI	GTCTC	7 cut(s)	21, 224, 401, 735, 759, 822, 2050
BsmFI	GGGAC	5 cut(s)	661, 900, 1602, 1901, 2005
BsmI	GAATGC	2 cut(s)	33, 838
BsnI	GGCC	5 cut(s)	564, 925, 1412, 1844, 2128
Bsp120I	GGGCCC	1 cut(s)	2126
Bsp1286I	GDGCHC	3 cut(s)	13, 514, 2130
Bsp1407I	TGTACA	1 cut(s)	794
Bsp143I	GATC	7 cut(s)	383, 462, 607, 976, 1180, 1606, 1749
Bsp1720I	GCTNAGC	1 cut(s)	591
Bsp19I	CCATGG	1 cut(s)	986
BspACI	CCGC	8 cut(s)	565, 632, 836, 1238, 1506, 1699, 1901, 2327
BspANI	GGCC	5 cut(s)	564, 925, 1412, 1844, 2128
BspCNI	CTCAG	8 cut(s)	295, 718, 769, 820, 1437, 2012, 2257, 2341
BspDI	ATCGAT	1 cut(s)	63
BspFNI	CGCG	1 cut(s)	567
BspHI	TCATGA	2 cut(s)	604, 2134
BspLI	GGNNCC	7 cut(s)	164, 1211, 1599, 1648, 1993, 2127, 2128
BspMI	ACCTGC	1 cut(s)	796
BspPI	GGATC	2 cut(s)	457, 1757
BspTI	CTTAAG	1 cut(s)	1792
BsrDI	GCAATG	1 cut(s)	2102
BsrFI	RCCGGY	1 cut(s)	1984
BsrGI	TGTACA	1 cut(s)	794
BsrI	ACTGG	6 cut(s)	926, 1104, 1642, 1650, 1773, 1848
BssAI	RCCGGY	1 cut(s)	1984
BssECI	CCNNGG	3 cut(s)	491, 679, 986
BssMI	GATC	7 cut(s)	383, 462, 607, 976, 1180, 1606, 1749
BssSI	CACGAG	1 cut(s)	1389
BssT1I	CCWWGG	3 cut(s)	491, 679, 986
Bst2BI	CACGAG	1 cut(s)	1389
Bst2UI	CCWGG	1 cut(s)	30
Bst4CI	ACNGT	4 cut(s)	253, 379, 2250, 2417
Bst6I	CTCTTC	4 cut(s)	335, 453, 1567, 2041
BstAFI	CTTAAG	1 cut(s)	1792
BstAPI	GCANNNNNTGC	1 cut(s)	90
BstAUI	TGTACA	1 cut(s)	794
BstBAI	YACGTR	1 cut(s)	2261
BstC8I	GCNNGC	8 cut(s)	86, 445, 700, 783, 1115, 1948, 2103, 2190
BstDSI	CCRYGG	1 cut(s)	986
BstF5I	GGATG	5 cut(s)	412, 580, 997, 1366, 1720
BstFNI	CGCG	1 cut(s)	567
BstH2I	RGCGCY	1 cut(s)	193
BstHHI	GCGC	1 cut(s)	192
BstKTI	GATC	7 cut(s)	386, 465, 610, 979, 1183, 1609, 1752
BstMAI	GTCTC	7 cut(s)	21, 224, 401, 735, 759, 822, 2050
BstMBI	GATC	7 cut(s)	383, 462, 607, 976, 1180, 1606, 1749
BstNI	CCWGG	1 cut(s)	30
BstNSI	RCATGY	1 cut(s)	817
BstPAI	GACNNNNGTC	2 cut(s)	1501, 2062
BstSCI	CCNGG	4 cut(s)	28, 185, 505, 909
BstSLI	GKGCMC	1 cut(s)	2130
BstUI	CGCG	1 cut(s)	567
BstV1I	GCAGC	5 cut(s)	872, 1222, 1270, 1495, 2191
BstV2I	GAAGAC	3 cut(s)	704, 850, 2418
BstX2I	RGATCY	1 cut(s)	462
BstXI	CCANNNNNNTGG	1 cut(s)	284
BstYI	RGATCY	1 cut(s)	462
Bsu15I	ATCGAT	1 cut(s)	63
BsuI	GTATCC	2 cut(s)	367, 1312
BsuRI	GGCC	5 cut(s)	564, 925, 1412, 1844, 2128
BsuTUI	ATCGAT	1 cut(s)	63
BtgI	CCRYGG	1 cut(s)	986
BtsCI	GGATG	5 cut(s)	412, 580, 997, 1366, 1720
BtsI	GCAGTG	1 cut(s)	1648
BtsIMutI	CAGTG	7 cut(s)	333, 713, 944, 1097, 1648, 1657, 2189
BveI	ACCTGC	1 cut(s)	796
Cac8I	GCNNGC	8 cut(s)	86, 445, 700, 783, 1115, 1948, 2103, 2190
CaiI	CAGNNNCTG	2 cut(s)	1261, 2006
CciI	TCATGA	2 cut(s)	604, 2134
CfoI	GCGC	1 cut(s)	192
Cfr10I	RCCGGY	1 cut(s)	1984
Cfr13I	GGNCC	4 cut(s)	1696, 1992, 2126, 2127
ClaI	ATCGAT	1 cut(s)	63
Csp6I	GTAC	2 cut(s)	795, 1766
CspCI	CAANNNNNGTGG	2 cut(s)	1458, 1493
CviQI	GTAC	2 cut(s)	795, 1766
DpnI	GATC	7 cut(s)	385, 464, 609, 978, 1182, 1608, 1751
DpnII	GATC	7 cut(s)	383, 462, 607, 976, 1180, 1606, 1749
EaeI	YGGCCR	3 cut(s)	562, 923, 1410
Eam1104I	CTCTTC	4 cut(s)	335, 453, 1567, 2041
EarI	CTCTTC	4 cut(s)	335, 453, 1567, 2041
Eco130I	CCWWGG	3 cut(s)	491, 679, 986
Eco147I	AGGCCT	1 cut(s)	1844
Eco24I	GRGCYC	1 cut(s)	2130
Eco47I	GGWCC	2 cut(s)	1696, 1992
Eco57I	CTGAAG	4 cut(s)	948, 1238, 1376, 2136
EcoO109I	RGGNCCY	2 cut(s)	1992, 2126
EcoRI	GAATTC	1 cut(s)	486
EcoRII	CCWGG	1 cut(s)	28
EcoT14I	CCWWGG	3 cut(s)	491, 679, 986
EcoT22I	ATGCAT	1 cut(s)	1663
EcoT38I	GRGCYC	1 cut(s)	2130
ErhI	CCWWGG	3 cut(s)	491, 679, 986
FalI	AAGNNNNNCTT	4 cut(s)	1738, 1770, 2222, 2254
FaqI	GGGAC	5 cut(s)	661, 900, 1602, 1901, 2005
FauNDI	CATATG	1 cut(s)	1554
Fnu4HI	GCNGC	7 cut(s)	565, 861, 1236, 1284, 1509, 2205, 2328
FokI	GGATG	5 cut(s)	419, 567, 1004, 1373, 1727
FriOI	GRGCYC	1 cut(s)	2130
Fsp4HI	GCNGC	7 cut(s)	565, 861, 1236, 1284, 1509, 2205, 2328
FspBI	CTAG	3 cut(s)	695, 1913, 1943
GlaI	GCGC	1 cut(s)	191
GluI	GCNGC	7 cut(s)	565, 861, 1236, 1284, 1509, 2205, 2328
GsuI	CTGGAG	3 cut(s)	97, 1283, 1831
HaeII	RGCGCY	1 cut(s)	193
HaeIII	GGCC	5 cut(s)	564, 925, 1412, 1844, 2128
HapII	CCGG	4 cut(s)	186, 506, 910, 1985
HhaI	GCGC	1 cut(s)	192
Hin6I	GCGC	1 cut(s)	190
HinP1I	GCGC	1 cut(s)	190
HindIII	AAGCTT	5 cut(s)	419, 545, 1197, 1250, 1961
HpaII	CCGG	4 cut(s)	186, 506, 910, 1985
HphI	GGTGA	7 cut(s)	175, 185, 259, 816, 1238, 1439, 1981
Hpy166II	GTNNAC	2 cut(s)	154, 2143
Hpy8I	GTNNAC	2 cut(s)	154, 2143
HpyCH4III	ACNGT	4 cut(s)	253, 379, 2250, 2417
HpyCH4IV	ACGT	1 cut(s)	2260
HpySE526I	ACGT	1 cut(s)	2260
HspAI	GCGC	1 cut(s)	190
Kzo9I	GATC	7 cut(s)	383, 462, 607, 976, 1180, 1606, 1749
LmnI	GCTCC	6 cut(s)	162, 241, 778, 851, 1471, 1603
Lsp1109I	GCAGC	5 cut(s)	872, 1222, 1270, 1495, 2191
LweI	GCATC	7 cut(s)	577, 589, 1175, 1351, 1670, 1993, 2191
MaeI	CTAG	3 cut(s)	695, 1913, 1943
MaeII	ACGT	1 cut(s)	2260
MaeIII	GTNAC	7 cut(s)	173, 242, 265, 272, 1151, 1427, 1969
MalI	GATC	7 cut(s)	385, 464, 609, 978, 1182, 1608, 1751
MboI	GATC	7 cut(s)	383, 462, 607, 976, 1180, 1606, 1749
MfeI	CAATTG	2 cut(s)	855, 1673
MflI	RGATCY	1 cut(s)	462
MhlI	GDGCHC	3 cut(s)	13, 514, 2130
MlsI	TGGCCA	2 cut(s)	925, 1412
MluNI	TGGCCA	2 cut(s)	925, 1412
MlyI	GAGTC	3 cut(s)	122, 190, 2162
MmeI	TCCRAC	4 cut(s)	1625, 1723, 1741, 2266
Mox20I	TGGCCA	2 cut(s)	925, 1412
Mph1103I	ATGCAT	1 cut(s)	1663
MroXI	GAANNNNTTC	2 cut(s)	1251, 1831
MscI	TGGCCA	2 cut(s)	925, 1412
MslI	CAYNNNNRTG	2 cut(s)	222, 585
Msp20I	TGGCCA	2 cut(s)	925, 1412
MspA1I	CMGCKG	2 cut(s)	1508, 1583
MspCI	CTTAAG	1 cut(s)	1792
MspI	CCGG	4 cut(s)	186, 506, 910, 1985
MspR9I	CCNGG	4 cut(s)	30, 187, 507, 911
MunI	CAATTG	2 cut(s)	855, 1673
Mva1269I	GAATGC	2 cut(s)	33, 838
MvaI	CCWGG	1 cut(s)	30
MvnI	CGCG	1 cut(s)	567
NciI	CCSGG	3 cut(s)	187, 507, 911
NcoI	CCATGG	1 cut(s)	986
NdeI	CATATG	1 cut(s)	1554
NdeII	GATC	7 cut(s)	383, 462, 607, 976, 1180, 1606, 1749
NlaIV	GGNNCC	7 cut(s)	164, 1211, 1599, 1648, 1993, 2127, 2128
NmuCI	GTSAC	6 cut(s)	173, 242, 265, 1151, 1427, 1969
NsiI	ATGCAT	1 cut(s)	1663
NspI	RCATGY	1 cut(s)	817
OliI	CACNNNNGTG	1 cut(s)	222
PagI	TCATGA	2 cut(s)	604, 2134
PaqCI	CACCTGC	1 cut(s)	796
PceI	AGGCCT	1 cut(s)	1844
PctI	GAATGC	2 cut(s)	33, 838
PdmI	GAANNNNTTC	2 cut(s)	1251, 1831
PkrI	GCNGC	7 cut(s)	566, 862, 1237, 1285, 1510, 2206, 2329
PleI	GAGTC	3 cut(s)	122, 190, 2162
PpsI	GAGTC	3 cut(s)	122, 190, 2162
Ppu21I	YACGTR	1 cut(s)	2261
PpuMI	RGGWCCY	1 cut(s)	1992
PshAI	GACNNNNGTC	2 cut(s)	1501, 2062
Psp5II	RGGWCCY	1 cut(s)	1992
Psp6I	CCWGG	1 cut(s)	28
PspGI	CCWGG	1 cut(s)	28
PspN4I	GGNNCC	7 cut(s)	164, 1211, 1599, 1648, 1993, 2127, 2128
PspOMI	GGGCCC	1 cut(s)	2126
PspPI	GGNCC	4 cut(s)	1696, 1992, 2126, 2127
PspPPI	RGGWCCY	1 cut(s)	1992
PstNI	CAGNNNCTG	2 cut(s)	1261, 2006
PsuI	RGATCY	1 cut(s)	462
PvuII	CAGCTG	1 cut(s)	1583
RsaI	GTAC	2 cut(s)	796, 1767
RsaNI	GTAC	2 cut(s)	795, 1766
RseI	CAYNNNNRTG	2 cut(s)	222, 585
SatI	GCNGC	7 cut(s)	565, 861, 1236, 1284, 1509, 2205, 2328
Sau3AI	GATC	7 cut(s)	383, 462, 607, 976, 1180, 1606, 1749
Sau96I	GGNCC	4 cut(s)	1696, 1992, 2126, 2127
ScaI	AGTACT	1 cut(s)	1767
SchI	GAGTC	3 cut(s)	122, 190, 2162
ScrFI	CCNGG	4 cut(s)	30, 187, 507, 911
SduI	GDGCHC	3 cut(s)	13, 514, 2130
SfaNI	GCATC	7 cut(s)	577, 589, 1175, 1351, 1670, 1993, 2191
SinI	GGWCC	2 cut(s)	1696, 1992
SmiMI	CAYNNNNRTG	2 cut(s)	222, 585
SmlI	CTYRAG	2 cut(s)	1190, 1792
SmoI	CTYRAG	2 cut(s)	1190, 1792
SseBI	AGGCCT	1 cut(s)	1844
SsiI	CCGC	8 cut(s)	565, 632, 836, 1238, 1506, 1699, 1901, 2327
SspI	AATATT	1 cut(s)	451
SspMI	CTAG	3 cut(s)	695, 1913, 1943
StuI	AGGCCT	1 cut(s)	1844
StyD4I	CCNGG	4 cut(s)	28, 185, 505, 909
StyI	CCWWGG	3 cut(s)	491, 679, 986
TaaI	ACNGT	4 cut(s)	253, 379, 2250, 2417
TaiI	ACGT	1 cut(s)	2263
TaqI	TCGA	3 cut(s)	63, 210, 228
TatI	WGTACW	2 cut(s)	794, 1765
TauI	GCSGC	2 cut(s)	567, 2330
TscAI	CASTG	7 cut(s)	333, 713, 951, 1104, 1648, 1657, 2189
TseFI	GTSAC	6 cut(s)	173, 242, 265, 1151, 1427, 1969
TseI	GCWGC	5 cut(s)	860, 1235, 1283, 1508, 2204
Tsp45I	GTSAC	6 cut(s)	173, 242, 265, 1151, 1427, 1969
TspDTI	ATGAA	7 cut(s)	593, 894, 1571, 1994, 2151, 2295, 2358
TspGWI	ACGGA	4 cut(s)	27, 419, 1540, 2013
TspRI	CASTG	7 cut(s)	333, 713, 951, 1104, 1648, 1657, 2189
Vha464I	CTTAAG	1 cut(s)	1792
VpaK11BI	GGWCC	2 cut(s)	1696, 1992
XapI	RAATTY	5 cut(s)	486, 1276, 1291, 1474, 2385
XceI	RCATGY	1 cut(s)	817
XmnI	GAANNNNTTC	2 cut(s)	1251, 1831
XspI	CTAG	3 cut(s)	695, 1913, 1943
ZrmI	AGTACT	1 cut(s)	1767
Zsp2I	ATGCAT	1 cut(s)	1663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.