Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0007694

Physical Location & Seq

Genomic Coordinates Reverse (-)

256953 .. 262104

Gene Structure 5152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG003100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2421 bp

ATGGCTACTCTCCTCACCATTCCGCCTTGCTCTTGCTTCTGTCGAACTGCTCGAAATCACAATGTCGTCTTCTGCGTACGAGCCTGTCACTCCAGAGTTGGCATTTCTAGGGTTTCCAGGATGACGAGAAAGGATGAGAATCTCACCGCTCTCTGGGCTCTGAATGCTGTCGACACCCACCACCACCACATTGTGGAGACTCCTCCAGCTCGCACCACCGTTGAAATCCCCGTCACCTGTTACCAGCTCATTGGTGTTCCTGATCGAGCCGAGAAAGATGAGGTTGTTAAATCAGTCATGGATTTGAAGAGTGCTGAAATTGAAGAAGGTTACACCATGGACGCTGTTGGATATCGCCAGGTTCTCTTAATGGATGTGAGAGATAAGCTTCTTTTTGAACCAGAATATGCTGGTAATATTAAGGAAAAGATCCCACCTAAGTCATCCTTACGAATTCCTTGGGCATGGTTGCCAGGTGCTCTTTGCCTCCTTCAAGAGGTTGGGCAAGTTAAGCTTGTGCAAGATATTGGCCGCGTAGCTGTTCAGCATCCAGATGCTAAACCGTATATTCATGATCTACTTCTTTCTATGGCATTAGCTGAGTGTGCAACTGCAAAGATGGGTTTTGAAAAGAACAAGGTATCCCAAGGATTTGAAGCTCTTGCTCGTGCTCAATGCCTTCTAAGGAGTAAAAAGTCTCTTGGGAAACTATCATTGTTGTCTCAGATAGAAGAGTCTTTGGAGGAGCTTGCACCGGCCTGCACTTTGGAATTGCTAGGCATGCCTCACTCACCAGAGAATGCTGAAAGAAGACGAGGAGCAATTGCAGCCTTGCGTGAACTGGTTAGACAAGGGCTTGGTGTGGAAACATCATGCCGAGTCCACGACTGGCCGTGCTTCCTGAGCCAAGCACTTAATAGACTAATGGCTTCAGAGATAGTTGATCTTCTTCCATGGGATGATTTAGCTATTACAAGGAAGAATAAGAAATCACTTGATTCGCAGAATCAAAGGGTTGTAATTGATTTCAATTGCTTCTACATGGTATTAATAGCTTATGTTGCGCTGGGGTTTTCAAGCAAGCAACAAGAATTGATTGACAAAGCAAAAACTATATGTGAATGTCTGATTGCATCAGAGGGTTGTGATTTAAAACTTGAGGAAGCTTTTTGCTTGTTTCTTCTTGGTCAGGGTAATGAGGCTGCAGTTGTTGAAAAGCTTCAGAAGCTGGAATTAAATTCAAGTTCTGCTCCGCGGATGTCAATCAAAGGGAAGGAAATTAAGAATAGTGATGGTGCAAAGCAATCACTGGAAATGTGGCTGAAGGATGCTGTCCTTGCTGTCTTTCCAGACTCACGCGATTGCCCTCCATCATTGGCTAACTATTTTGGTGGTGAAAAGAGGACTCCTGTTAGCAAGAAAAGTAAATTAGCTCCACAGACTTTACCTATTTTAAGTCATAGACCAATGTCGACTACTCTTGTGTCAGAGCGGAGAGATTTCGATGACTCTCTTTCCCACATGAACTCTTCTCAACATCTTGGAACAGCTGTTAAACAGTTGGCTCCAACTGATCTGCAAAGCCCCTTGATATTGGGCAAGACTGGTGGTGGGAGCAGTGGTAATGCTGGATCTGTTCAAATGAAAAGGAATCTTGGCATGCGCCATGGTAAAGTTGTAGGTTGGCTCACAAGAGGATTTCTGGTGGGAAGGATCACTTTTGTTGCTGTAGTCGGGTGCATTGTTTTTGTTACCTTAAAGTTAACGGGCATGAAAGGAAATGAGATCAGAAGTGCTTCTAAACGAGCCCACAGTAAACCAAATTTGCACACAAGTTCCGTTGCTTGGACAACAGATTCATCTGTAGATTTCCGTCTGGGCCCTGCTTATATCAAGGGCAATGGACTCGCTGGTGGACTTAAGAAGGTTTTGATGACTTTTATGAAGCAGGTAAGGAACTGTGCAGATACTGGAAATCCACCAGTTTCGCATCTGTTGTCTTCAACTTCTTTGTGCCGGAGACCAATGTCTGTTGAGGAAGCGGAAGATCTTGTCAAGCGATGGCAAGAAATTAAAGCTGAAGCTCTGGGGCCCAGCCATGAAATTCAGAGCCTCTCTGAACTCCTTGACGAGTCAATGCTTCTTCAGTGGCAAGCTTTGGCTGATGCTGCAAAAGCAAGGTCTTGTCATTGGAAATTTGTTTTGCTACAATTGTCCGTCCTGCGAGCTGAAATTTTATCAGATGAGGTTGGAGAGACGGCAGAAATTGAGGCTCTGCTAGAGGAAGCAGCCGAACTTGTTAATGAGTCTGAACAAAAGAACCCAAGTTATTACAGCACCTATAGAATTTGGTATGTTCTAAGAAGGCAAGAAGATGGTTCCTGGAGGTTCTGTGAAGGGGAGGTTCAAATACCATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010020 GO:0016020 GO:0016043 GO:0019866 GO:0031090 GO:0031967 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0043621 GO:0044422 GO:0044424 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko00020 ko00640 ko01100 ko01110 ko01120 ko01130 ko01200 map00020 map00640 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

DUF4101

Protein Analysis

806

Amino Acids

89.3

Weight (kDa)

8.08

Isoelectric Point (pI)

51.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Arm_PDR	PF25515	151 - 297	1.6e-47	Plastid division regulator ARM repeat
ARC6	PF23468	345 - 464	8.8e-09	Plastid division regulator alpha solenoid domain
ARC6-like_IMS	PF13355	681 - 797	1.6e-29	ARC6-like, IMS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007694)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19180 AT3G19180
fragaria_vesca	FvH4_5g18390 FvH4_5g18390 FvH4_5g18390
malus_domestica	MD06G1239700.v1.1 MD14G1245800.v1.1
prunus_persica	Prupe.5G243600_v2.0.a1
pyrus_communis	pycom06g21520 pycom14g20670
rosa_chinensis	RchiOBHm_Chr7g0177091
rosa_laevigata	RLG00000005557
rosa_multiflora	Rmu_co8345735.1_g000001 Rmu_sc0005310.1_g000023 Rmu_sc0005912.1_g000002
rosa_roxburghii	Rroxscaffold_3G00276100
rosa_rugosa	Rorug06G0403700
rosa_samantha	Rh7AG003100 Rh7BG003500 Rh7BG003600 Rh7CG002700 Rh7CG002800 Rh7DG003200
rosa_wichuraiana	Rw7G000260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1939
AccB7I	CCANNNNNTGG	1 cut(s)	193
AccBSI	CCGCTC	2 cut(s)	149, 1492
AccI	GTMKAC	2 cut(s)	171, 1472
AccII	CGCG	3 cut(s)	534, 1255, 1359
AciI	CCGC	7 cut(s)	23, 147, 532, 1253, 1255, 1492, 2042
AclWI	GGATC	3 cut(s)	424, 1639, 1721
AcoI	YGGCCR	2 cut(s)	529, 890
AcsI	RAATTY	7 cut(s)	453, 1237, 1822, 2103, 2195, 2232, 2346
AcuI	CTGAAG	5 cut(s)	915, 1205, 1343, 2100, 2129
AdeI	CACNNNGTG	1 cut(s)	193
AfaI	GTAC	1 cut(s)	78
AfiI	CCNNNNNNNGG	4 cut(s)	153, 193, 496, 1845
AflII	CTTAAG	1 cut(s)	1919
AjnI	CCWGG	4 cut(s)	116, 357, 472, 2381
AloI	GAACNNNNNNTCC	2 cut(s)	626, 658
Alw21I	GWGCWC	2 cut(s)	481, 673
Alw26I	GTCTC	5 cut(s)	191, 702, 726, 2014, 2249
AlwI	GGATC	3 cut(s)	424, 1639, 1721
AlwNI	CAGNNNCTG	2 cut(s)	1228, 1970
AoxI	GGCC	5 cut(s)	529, 756, 890, 1879, 2090
ApaI	GGGCCC	2 cut(s)	1883, 2094
ApeKI	GCWGC	4 cut(s)	827, 1202, 2168, 2288
ApoI	RAATTY	7 cut(s)	453, 1237, 1822, 2103, 2195, 2232, 2346
ArsI	GACNNNNNNTTYG	2 cut(s)	2165, 2197
AseI	ATTAAT	1 cut(s)	1049
Asp700I	GAANNNNTTC	2 cut(s)	1218, 1795
AspLEI	GCGC	2 cut(s)	1066, 1665
AspS9I	GGNCC	4 cut(s)	1879, 1880, 2090, 2091
AsuHPI	GGTGA	5 cut(s)	7, 136, 226, 783, 1406
BaeGI	GKGCMC	2 cut(s)	1883, 2094
BanII	GRGCYC	4 cut(s)	160, 1810, 1883, 2094
BauI	CACGAG	1 cut(s)	666
BbsI	GAAGAC	3 cut(s)	61, 817, 1992
Bbv12I	GWGCWC	2 cut(s)	481, 673
BbvI	GCAGC	4 cut(s)	839, 1189, 2155, 2300
BccI	CCATC	5 cut(s)	613, 1286, 1378, 2055, 2369
BceAI	ACGGC	2 cut(s)	877, 2274
BcgI	CGANNNNNNTGC	2 cut(s)	1888, 1922
BciT130I	CCWGG	4 cut(s)	118, 359, 474, 2383
BciVI	GTATCC	1 cut(s)	652
BcoDI	GTCTC	5 cut(s)	191, 702, 726, 2014, 2249
BfaI	CTAG	3 cut(s)	108, 776, 2279
BfmI	CTRYAG	4 cut(s)	1203, 1728, 1863, 2341
BfrI	CTTAAG	1 cut(s)	1919
BfuAI	ACCTGC	1 cut(s)	1939
BfuI	GTATCC	1 cut(s)	652
BglII	AGATCT	1 cut(s)	2047
BisI	GCNGC	5 cut(s)	532, 828, 1203, 2169, 2289
BlsI	GCNGC	5 cut(s)	533, 829, 1204, 2170, 2290
Bme1390I	CCNGG	4 cut(s)	118, 359, 474, 2383
BmgT120I	GGNCC	4 cut(s)	1879, 1880, 2090, 2091
BmiI	GGNNCC	5 cut(s)	1566, 1881, 2091, 2092, 2380
BmrFI	CCNGG	4 cut(s)	118, 359, 474, 2383
BmsI	GCATC	6 cut(s)	544, 556, 1142, 1318, 1999, 2155
BoxI	GACNNNNGTC	2 cut(s)	1468, 2026
BpiI	GAAGAC	3 cut(s)	61, 817, 1992
BpmI	CTGGAG	3 cut(s)	76, 189, 2404
Bpu10I	CCTNAGC	1 cut(s)	902
BpuEI	CTTGAG	1 cut(s)	1178
BsaBI	GATNNNNATC	2 cut(s)	138, 1262
BsaI	GGTCTC	1 cut(s)	2014
BsaJI	CCNNGG	6 cut(s)	336, 458, 646, 953, 1253, 1666
BsaXI	ACNNNNNCTCC	4 cut(s)	1606, 1636, 2377, 2407
Bsc4I	CCNNNNNNNGG	4 cut(s)	153, 193, 496, 1845
Bse118I	RCCGGY	1 cut(s)	754
Bse1I	ACTGG	6 cut(s)	846, 893, 1314, 1609, 1975, 1982
Bse3DI	GCAATG	1 cut(s)	1906
Bse8I	GATNNNNATC	2 cut(s)	138, 1262
BseBI	CCWGG	4 cut(s)	118, 359, 474, 2383
BseDI	CCNNGG	6 cut(s)	336, 458, 646, 953, 1253, 1666
BseGI	GGATG	8 cut(s)	126, 139, 379, 443, 547, 964, 1263, 1333
BseJI	GATNNNNATC	2 cut(s)	138, 1262
BseLI	CCNNNNNNNGG	4 cut(s)	153, 193, 496, 1845
BseMI	GCAATG	1 cut(s)	1906
BseMII	CTCAG	3 cut(s)	591, 737, 893
BseNI	ACTGG	6 cut(s)	846, 893, 1314, 1609, 1975, 1982
BseRI	GAGGAG	3 cut(s)	192, 758, 831
BseSI	GKGCMC	2 cut(s)	1883, 2094
BseXI	GCAGC	4 cut(s)	839, 1189, 2155, 2300
BseYI	CCCAGC	2 cut(s)	1066, 2093
BsgI	GTGCAG	2 cut(s)	745, 1983
Bsh1236I	CGCG	3 cut(s)	534, 1255, 1359
BshFI	GGCC	5 cut(s)	531, 758, 892, 1881, 2092
BsiHKAI	GWGCWC	2 cut(s)	481, 673
BsiSI	CCGG	2 cut(s)	755, 2017
BsiWI	CGTACG	1 cut(s)	76
BslI	CCNNNNNNNGG	4 cut(s)	153, 193, 496, 1845
BsmAI	GTCTC	5 cut(s)	191, 702, 726, 2014, 2249
BsmBI	CGTCTC	1 cut(s)	2249
BsmI	GAATGC	2 cut(s)	169, 805
BsnI	GGCC	5 cut(s)	531, 758, 892, 1881, 2092
Bso31I	GGTCTC	1 cut(s)	2014
Bsp120I	GGGCCC	2 cut(s)	1879, 2090
Bsp1286I	GDGCHC	6 cut(s)	160, 481, 673, 1810, 1883, 2094
Bsp143I	GATC	9 cut(s)	262, 429, 574, 943, 1573, 1631, 1713, 1785, 2047
Bsp19I	CCATGG	3 cut(s)	336, 953, 1666
BspACI	CCGC	7 cut(s)	23, 147, 532, 1253, 1255, 1492, 2042
BspANI	GGCC	5 cut(s)	531, 758, 892, 1881, 2092
BspCNI	CTCAG	3 cut(s)	592, 736, 894
BspFNI	CGCG	3 cut(s)	534, 1255, 1359
BspHI	TCATGA	2 cut(s)	571, 2417
BspLI	GGNNCC	5 cut(s)	1566, 1881, 2091, 2092, 2380
BspMAI	CTGCAG	1 cut(s)	1207
BspMI	ACCTGC	1 cut(s)	1939
BspPI	GGATC	3 cut(s)	424, 1639, 1721
BspTI	CTTAAG	1 cut(s)	1919
BspTNI	GGTCTC	1 cut(s)	2014
BsrBI	CCGCTC	2 cut(s)	149, 1492
BsrDI	GCAATG	1 cut(s)	1906
BsrFI	RCCGGY	1 cut(s)	754
BsrI	ACTGG	6 cut(s)	846, 893, 1314, 1609, 1975, 1982
BssAI	RCCGGY	1 cut(s)	754
BssECI	CCNNGG	6 cut(s)	336, 458, 646, 953, 1253, 1666
BssMI	GATC	9 cut(s)	262, 429, 574, 943, 1573, 1631, 1713, 1785, 2047
BssSI	CACGAG	1 cut(s)	666
BssT1I	CCWWGG	5 cut(s)	336, 458, 646, 953, 1666
Bst2BI	CACGAG	1 cut(s)	666
Bst2UI	CCWGG	4 cut(s)	118, 359, 474, 2383
Bst4CI	ACNGT	5 cut(s)	220, 564, 1560, 1814, 1961
Bst6I	CTCTTC	3 cut(s)	302, 726, 1534
BstAFI	CTTAAG	1 cut(s)	1919
BstC8I	GCNNGC	8 cut(s)	211, 750, 760, 782, 1082, 1661, 2154, 2226
BstDEI	CTNAG	6 cut(s)	438, 600, 683, 723, 902, 2360
BstDSI	CCRYGG	4 cut(s)	336, 953, 1253, 1666
BstENI	CCTNNNNNAGG	1 cut(s)	494
BstF5I	GGATG	8 cut(s)	126, 139, 379, 443, 547, 964, 1263, 1333
BstFNI	CGCG	3 cut(s)	534, 1255, 1359
BstHHI	GCGC	2 cut(s)	1066, 1665
BstKTI	GATC	9 cut(s)	265, 432, 577, 946, 1576, 1634, 1716, 1788, 2050
BstMAI	GTCTC	5 cut(s)	191, 702, 726, 2014, 2249
BstMBI	GATC	9 cut(s)	262, 429, 574, 943, 1573, 1631, 1713, 1785, 2047
BstNI	CCWGG	4 cut(s)	118, 359, 474, 2383
BstNSI	RCATGY	2 cut(s)	784, 1663
BstPAI	GACNNNNGTC	2 cut(s)	1468, 2026
BstSCI	CCNGG	4 cut(s)	116, 357, 472, 2381
BstSFI	CTRYAG	4 cut(s)	1203, 1728, 1863, 2341
BstSLI	GKGCMC	2 cut(s)	1883, 2094
BstUI	CGCG	3 cut(s)	534, 1255, 1359
BstV1I	GCAGC	4 cut(s)	839, 1189, 2155, 2300
BstV2I	GAAGAC	3 cut(s)	61, 817, 1992
BstX2I	RGATCY	3 cut(s)	429, 1631, 2047
BstXI	CCANNNNNNTGG	1 cut(s)	251
BstYI	RGATCY	3 cut(s)	429, 1631, 2047
BsuI	GTATCC	1 cut(s)	652
BsuRI	GGCC	5 cut(s)	531, 758, 892, 1881, 2092
BtgI	CCRYGG	4 cut(s)	336, 953, 1253, 1666
BtgZI	GCGATG	1 cut(s)	2074
BtsCI	GGATG	8 cut(s)	126, 139, 379, 443, 547, 964, 1263, 1333
BtsI	GCAGTG	1 cut(s)	1624
BtsIMutI	CAGTG	3 cut(s)	1307, 1624, 2153
BveI	ACCTGC	1 cut(s)	1939
Cac8I	GCNNGC	8 cut(s)	211, 750, 760, 782, 1082, 1661, 2154, 2226
CaiI	CAGNNNCTG	2 cut(s)	1228, 1970
CciI	TCATGA	2 cut(s)	571, 2417
CfoI	GCGC	2 cut(s)	1066, 1665
Cfr10I	RCCGGY	1 cut(s)	754
Cfr13I	GGNCC	4 cut(s)	1879, 1880, 2090, 2091
Cfr42I	CCGCGG	1 cut(s)	1256
CseI	GACGC	1 cut(s)	350
Csp6I	GTAC	1 cut(s)	77
CspCI	CAANNNNNGTGG	2 cut(s)	1588, 1623
CviQI	GTAC	1 cut(s)	77
DdeI	CTNAG	6 cut(s)	438, 600, 683, 723, 902, 2360
DpnI	GATC	9 cut(s)	264, 431, 576, 945, 1575, 1633, 1715, 1787, 2049
DpnII	GATC	9 cut(s)	262, 429, 574, 943, 1573, 1631, 1713, 1785, 2047
DraI	TTTAAA	1 cut(s)	1152
DraIII	CACNNNGTG	1 cut(s)	193
EaeI	YGGCCR	2 cut(s)	529, 890
Eam1104I	CTCTTC	3 cut(s)	302, 726, 1534
EarI	CTCTTC	3 cut(s)	302, 726, 1534
EciI	GGCGGA	1 cut(s)	12
Eco130I	CCWWGG	5 cut(s)	336, 458, 646, 953, 1666
Eco24I	GRGCYC	4 cut(s)	160, 1810, 1883, 2094
Eco31I	GGTCTC	1 cut(s)	2014
Eco32I	GATATC	1 cut(s)	353
Eco57I	CTGAAG	5 cut(s)	915, 1205, 1343, 2100, 2129
EcoNI	CCTNNNNNAGG	1 cut(s)	494
EcoO109I	RGGNCCY	2 cut(s)	1880, 2090
EcoRI	GAATTC	1 cut(s)	453
EcoRII	CCWGG	4 cut(s)	116, 357, 472, 2381
EcoRV	GATATC	1 cut(s)	353
EcoT14I	CCWWGG	5 cut(s)	336, 458, 646, 953, 1666
EcoT38I	GRGCYC	4 cut(s)	160, 1810, 1883, 2094
ErhI	CCWWGG	5 cut(s)	336, 458, 646, 953, 1666
Esp3I	CGTCTC	1 cut(s)	2249
FalI	AAGNNNNNCTT	6 cut(s)	431, 463, 498, 530, 1702, 1734
FblI	GTMKAC	2 cut(s)	171, 1472
Fnu4HI	GCNGC	5 cut(s)	532, 828, 1203, 2169, 2289
FokI	GGATG	8 cut(s)	133, 146, 386, 430, 534, 971, 1270, 1340
FriOI	GRGCYC	4 cut(s)	160, 1810, 1883, 2094
Fsp4HI	GCNGC	5 cut(s)	532, 828, 1203, 2169, 2289
FspBI	CTAG	3 cut(s)	108, 776, 2279
GlaI	GCGC	2 cut(s)	1065, 1664
GluI	GCNGC	5 cut(s)	532, 828, 1203, 2169, 2289
GsaI	CCCAGC	2 cut(s)	1070, 2097
GsuI	CTGGAG	3 cut(s)	76, 189, 2404
HaeIII	GGCC	5 cut(s)	531, 758, 892, 1881, 2092
HapII	CCGG	2 cut(s)	755, 2017
HgaI	GACGC	1 cut(s)	350
HhaI	GCGC	2 cut(s)	1066, 1665
Hin6I	GCGC	2 cut(s)	1064, 1663
HinP1I	GCGC	2 cut(s)	1064, 1663
HincII	GTYRAC	3 cut(s)	172, 1473, 1764
HindII	GTYRAC	3 cut(s)	172, 1473, 1764
HindIII	AAGCTT	5 cut(s)	386, 512, 1164, 1217, 2154
HpaI	GTTAAC	1 cut(s)	1764
HpaII	CCGG	2 cut(s)	755, 2017
HphI	GGTGA	5 cut(s)	7, 136, 226, 783, 1406
Hpy166II	GTNNAC	7 cut(s)	172, 839, 883, 1473, 1764, 1817, 1916
Hpy188III	TCNNGA	8 cut(s)	93, 260, 494, 551, 572, 901, 1349, 2418
Hpy8I	GTNNAC	7 cut(s)	172, 839, 883, 1473, 1764, 1817, 1916
HpyAV	CCTTC	9 cut(s)	320, 500, 689, 1267, 1318, 1704, 1918, 2358, 2390
HpyCH4III	ACNGT	5 cut(s)	220, 564, 1560, 1814, 1961
HpyF3I	CTNAG	6 cut(s)	438, 600, 683, 723, 902, 2360
HspAI	GCGC	2 cut(s)	1064, 1663
KspAI	GTTAAC	1 cut(s)	1764
KspI	CCGCGG	1 cut(s)	1256
Kzo9I	GATC	9 cut(s)	262, 429, 574, 943, 1573, 1631, 1713, 1785, 2047
LmnI	GCTCC	6 cut(s)	745, 818, 1255, 1438, 1570, 1614
Lsp1109I	GCAGC	4 cut(s)	839, 1189, 2155, 2300
LweI	GCATC	6 cut(s)	544, 556, 1142, 1318, 1999, 2155
MaeI	CTAG	3 cut(s)	108, 776, 2279
MaeIII	GTNAC	5 cut(s)	86, 232, 239, 329, 1750
MalI	GATC	9 cut(s)	264, 431, 576, 945, 1575, 1633, 1715, 1787, 2049
MbiI	CCGCTC	2 cut(s)	149, 1492
MboI	GATC	9 cut(s)	262, 429, 574, 943, 1573, 1631, 1713, 1785, 2047
MfeI	CAATTG	3 cut(s)	822, 1030, 2210
MflI	RGATCY	3 cut(s)	429, 1631, 2047
MhlI	GDGCHC	6 cut(s)	160, 481, 673, 1810, 1883, 2094
MlyI	GAGTC	9 cut(s)	193, 743, 888, 1346, 1399, 1502, 1899, 2141, 2315
MmeI	TCCRAC	3 cut(s)	328, 1592, 2230
MroXI	GAANNNNTTC	2 cut(s)	1218, 1795
MslI	CAYNNNNRTG	1 cut(s)	552
MspA1I	CMGCKG	2 cut(s)	1255, 1550
MspCI	CTTAAG	1 cut(s)	1919
MspI	CCGG	2 cut(s)	755, 2017
MspR9I	CCNGG	4 cut(s)	118, 359, 474, 2383
MunI	CAATTG	3 cut(s)	822, 1030, 2210
Mva1269I	GAATGC	2 cut(s)	169, 805
MvaI	CCWGG	4 cut(s)	118, 359, 474, 2383
MvnI	CGCG	3 cut(s)	534, 1255, 1359
NcoI	CCATGG	3 cut(s)	336, 953, 1666
NdeII	GATC	9 cut(s)	262, 429, 574, 943, 1573, 1631, 1713, 1785, 2047
NlaIV	GGNNCC	5 cut(s)	1566, 1881, 2091, 2092, 2380
NmeAIII	GCCGAG	2 cut(s)	295, 902
NmuCI	GTSAC	2 cut(s)	86, 232
NspI	RCATGY	2 cut(s)	784, 1663
PaeI	GCATGC	2 cut(s)	784, 1663
PagI	TCATGA	2 cut(s)	571, 2417
PcsI	WCGNNNNNNNCGW	2 cut(s)	49, 72
PctI	GAATGC	2 cut(s)	169, 805
PdmI	GAANNNNTTC	2 cut(s)	1218, 1795
PfeI	GAWTC	5 cut(s)	139, 998, 1006, 1651, 1856
Pfl23II	CGTACG	1 cut(s)	76
PflMI	CCANNNNNTGG	1 cut(s)	193
PfoI	TCCNGGA	2 cut(s)	116, 2381
PkrI	GCNGC	5 cut(s)	533, 829, 1204, 2170, 2290
PleI	GAGTC	9 cut(s)	193, 742, 887, 1346, 1399, 1502, 1899, 2140, 2314
PpsI	GAGTC	9 cut(s)	193, 742, 887, 1346, 1399, 1502, 1899, 2140, 2314
PshAI	GACNNNNGTC	2 cut(s)	1468, 2026
PshBI	ATTAAT	1 cut(s)	1049
Psp6I	CCWGG	4 cut(s)	116, 357, 472, 2381
PspFI	CCCAGC	2 cut(s)	1066, 2093
PspGI	CCWGG	4 cut(s)	116, 357, 472, 2381
PspLI	CGTACG	1 cut(s)	76
PspN4I	GGNNCC	5 cut(s)	1566, 1881, 2091, 2092, 2380
PspOMI	GGGCCC	2 cut(s)	1879, 2090
PspPI	GGNCC	4 cut(s)	1879, 1880, 2090, 2091
PstI	CTGCAG	1 cut(s)	1207
PstNI	CAGNNNCTG	2 cut(s)	1228, 1970
PsuI	RGATCY	3 cut(s)	429, 1631, 2047
PvuII	CAGCTG	1 cut(s)	1550
RsaI	GTAC	1 cut(s)	78
RsaNI	GTAC	1 cut(s)	77
RseI	CAYNNNNRTG	1 cut(s)	552
SacII	CCGCGG	1 cut(s)	1256
SalI	GTCGAC	2 cut(s)	170, 1471
SatI	GCNGC	5 cut(s)	532, 828, 1203, 2169, 2289
Sau3AI	GATC	9 cut(s)	262, 429, 574, 943, 1573, 1631, 1713, 1785, 2047
Sau96I	GGNCC	4 cut(s)	1879, 1880, 2090, 2091
SchI	GAGTC	9 cut(s)	193, 743, 888, 1346, 1399, 1502, 1899, 2141, 2315
ScrFI	CCNGG	4 cut(s)	118, 359, 474, 2383
SduI	GDGCHC	6 cut(s)	160, 481, 673, 1810, 1883, 2094
SfaNI	GCATC	6 cut(s)	544, 556, 1142, 1318, 1999, 2155
SfcI	CTRYAG	4 cut(s)	1203, 1728, 1863, 2341
Sfr303I	CCGCGG	1 cut(s)	1256
SgrBI	CCGCGG	1 cut(s)	1256
SmiMI	CAYNNNNRTG	1 cut(s)	552
SmlI	CTYRAG	2 cut(s)	1157, 1919
SmoI	CTYRAG	2 cut(s)	1157, 1919
SphI	GCATGC	2 cut(s)	784, 1663
SsiI	CCGC	7 cut(s)	23, 147, 532, 1253, 1255, 1492, 2042
SspI	AATATT	1 cut(s)	418
SspMI	CTAG	3 cut(s)	108, 776, 2279
StyD4I	CCNGG	4 cut(s)	116, 357, 472, 2381
StyI	CCWWGG	5 cut(s)	336, 458, 646, 953, 1666
TaaI	ACNGT	5 cut(s)	220, 564, 1560, 1814, 1961
TaqI	TCGA	6 cut(s)	43, 52, 171, 265, 1472, 1503
TauI	GCSGC	1 cut(s)	534
TfiI	GAWTC	5 cut(s)	139, 998, 1006, 1651, 1856
TscAI	CASTG	3 cut(s)	1314, 1624, 2153
TseFI	GTSAC	2 cut(s)	86, 232
TseI	GCWGC	4 cut(s)	827, 1202, 2168, 2288
Tsp45I	GTSAC	2 cut(s)	86, 232
TspDTI	ATGAA	7 cut(s)	560, 1538, 1658, 1787, 1848, 1958, 2115
TspGWI	ACGGA	3 cut(s)	1828, 1862, 2206
TspRI	CASTG	3 cut(s)	1314, 1624, 2153
Van91I	CCANNNNNTGG	1 cut(s)	193
Vha464I	CTTAAG	1 cut(s)	1919
VspI	ATTAAT	1 cut(s)	1049
XagI	CCTNNNNNAGG	1 cut(s)	494
XapI	RAATTY	7 cut(s)	453, 1237, 1822, 2103, 2195, 2232, 2346
XceI	RCATGY	2 cut(s)	784, 1663
XmiI	GTMKAC	2 cut(s)	171, 1472
XmnI	GAANNNNTTC	2 cut(s)	1218, 1795
XspI	CTAG	3 cut(s)	108, 776, 2279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.