Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0007694

Physical Location & Seq

Genomic Coordinates Forward (+)

24110108 .. 24114626

Gene Structure 4519 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g21520.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

ATGACAGCTGCTTTGTCTCACGCCTTGCTAAGCATTCCGTCATCTCGCAGTTGCCTTTGCCGAATCGGTAATCACAAGCTCTGCGTTTGGGGTTTCTCCAGTGAAAGAAGCGACTCCGGAATCGGAATTTCTAGGGCTTACAAGAGGAACCGTGATAATCTCACCGGCCGCTGGAGTCTCAAATCACTCGACACCCACATTGGTGTCGAGACTGCTCCTCCTCGCACCACCGTTGAAATCCCCGTCACCTGTTACCAGCTTATTGGCGTTCCTGCTAAAGCTGAGAAAGATGAGGTTGTTAAATCAGTGATGGAATTGAAGAGTGCTGAAATTGAAGAAGGCTACACTTTGGATGCTGTGCGATCTCGCCTGGGTCTTTTAATGGATGTGAGAGATAAGCTTCTTTTTGAGCCAGAATACGCTGGCAATATTAAGGAAAACATCCCACCTAAATCTTCCCTACGAGTTCCTTGGGCATGGTTGCCCGGTGCACTTTGCCTTCTTCAAGAGGTTGGGGAAGTTAAGCTTGTGCAAGATGTTGGCCGCGTGGCTGTTCAGCATCCAGATGCTAAGCCTTATATTCATGATCTTCTTCTATCTATGGCGCTAGCGGAGTGTGCAACTGCAAAGGTTGGTTTTGAGAAGAACAAGGTGTCCCAAGGTTTTGAAGCTCTAGCTCGTGCTCAGTGTCTTCTAAGGAGTAGAAAGTCTCTTGGGAAAATAGCATTGTTGTCTCAGATAGAAGAATCTTTGGAGGAGCTTGCACCTGCTTGTACATTGGAATTGCTTGGCATGTCTCAGTCACCTGAGAATGCTGAAAGAAGACGAGGAGCAATTGCAGCCTTGCGTGAATTGGTCAGACAGGGACTTGATGTGGAAACTTCATGCCAGGTCCAAGACTGGCCATGCTTCTTGACCCAAGCACTTAATAGACTAATGGCTTCAGAGATGGTTGATCTTCTTCCATGGGATGAGCTAGCTATTACAAGGAAGAATAAGAAGTCACTAGAATCACAGAATCAACGGGTTGTAATTGATTTTAATTGTTTCTACACGGTGTTAATAGCTCACGTTGCACTGGGTTTTTCAAGCAAGCAAAAGGAATTAATTGAGAAAGCAAAATCTATATGTGAGTGCCTGATTGCATCAGAGGGTGCTGATCTGAAACTTGAGGAAGCTTTTTGCTTGTTCCTCCTTGGTCAGGTTGATGAGGCTGCGGTTGTTGAAAAGCTTCAGAAGCTGGACTTGAACTCAAATTCTGCTGCACGAAATTCAATCTTAGGGAAGGAAGTTAAGGATACTTGTGGTGCAACTCAATCGTTGGAAATGTGGCTGAAGGATGCTGTCCTTTCTGTGTTTCCAGACTCACGAGATTGCTCTCCATTGTTGGCCAACTTTTTTGGTGGTGACAAGAGGACTGCTTTGAGCAAGAAAAGCAAAGTAGCTCCACAGAAGTTGCCTATCATAAGTCAAAGACCAATATCCACTGCTTTTGTGTCGGAACGGAGGGATTTCGATGAATCTTTTTCCCATATGAACTCTTCTCAACATCTTGGGACAGCTGTTAAGCAGTTGGCTTCAACTGATCTGCAAAGTCCCTTAATATTGGGCAAGACTGGCAGTGGAAGCAGTTCTAATGCATCATCTGTTCAATTGGAAAGGAATCTTGGCATGCACCGTGGTAAAGCTTGGGATGGTTGGTTTGCGAGAGGAGTTTTGGTGGGAAGAATCGCTTTAGCTGGAGTTTTGGGGTGCATTGTTTTTGCTTCCTTAAGGTTAACAGGCTTGAAGGGAAATGAGATGAGAAGTGCTTCTAAACAGGCCTCCAGTAAGCCAAATATGCACACAAGTTCTATTGCTTGGACGACAGTTTCATCTGCGGATTCTAATCTAGTCCCTGCTTACGTCAAGGGAAATGGACTAGCAGGCAGATTTAAGAAGCTTTTGGCGACTTTTATGAAGCCAGTGGGGACCTGCTCAGATGCTGGAAATCCACAAATTCTGGATCTGTCTTCTTCAACAGCTGTGTTCCGGAGGCTTATGTCTATTGAAGAAGCTGAAGACCTTGTGAAGCAATGGCAAGCAATTAAGGCTGAAGCTCTGGGGCCCACTCATGAAATTCATAGCCTCTCTGAAATCCTTGATGACTCGATGCTTGTTCAGTGGCAGGCTTTGGCTGATGCTGCAAAAGCGAGGTCTTGTTATTGGAAGTTTGTCTTGCTACAACTGTCAGTCCTTGGTGCTGAAATTATATCAGATGAAGTTGGAGGGGAGAGAGCAGAGATCGAGGCTGTCGTAGAGGAAGCGGCTGAACTTGTTAATGAATCTGAGCAAAAGAACCCAAGTTATTACAGCACCTATAAAATTTGGTATGCTCTAAAAAGGCAAGAAGACGGTTCGTGGAGGTTCTGTGAAGGGGAAGTTCAAGCACCACCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010020 GO:0016020 GO:0016043 GO:0019866 GO:0031090 GO:0031967 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0043621 GO:0044422 GO:0044424 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko00020 ko00640 ko01100 ko01110 ko01120 ko01130 ko01200 map00020 map00640 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

DUF4101

Protein Analysis

813

Amino Acids

89.04

Weight (kDa)

6.52

Isoelectric Point (pI)

51.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007694)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19180 AT3G19180
fragaria_vesca	FvH4_5g18390 FvH4_5g18390 FvH4_5g18390
malus_domestica	MD06G1239700.v1.1 MD14G1245800.v1.1
prunus_persica	Prupe.5G243600_v2.0.a1
pyrus_communis	pycom06g21520 pycom14g20670
rosa_chinensis	RchiOBHm_Chr7g0177091
rosa_laevigata	RLG00000005557
rosa_multiflora	Rmu_co8345735.1_g000001 Rmu_sc0005310.1_g000023 Rmu_sc0005912.1_g000002
rosa_roxburghii	Rroxscaffold_3G00276100
rosa_rugosa	Rorug06G0403700
rosa_samantha	Rh7AG003100 Rh7BG003500 Rh7BG003600 Rh7CG002700 Rh7CG002800 Rh7DG003200
rosa_wichuraiana	Rw7G000260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	775
Acc36I	ACCTGC	2 cut(s)	775, 1982
AccII	CGCG	1 cut(s)	546
AccIII	TCCGGA	2 cut(s)	116, 2031
AciI	CCGC	6 cut(s)	169, 544, 611, 1217, 1880, 2306
AclWI	GGATC	1 cut(s)	2013
AcoI	YGGCCR	4 cut(s)	166, 541, 902, 1389
AcsI	RAATTY	6 cut(s)	126, 1255, 1270, 1998, 2118, 2364
AcuI	CTGAAG	5 cut(s)	927, 1217, 1355, 2079, 2115
AfaI	GTAC	1 cut(s)	775
AfiI	CCNNNNNNNGG	2 cut(s)	171, 1201
AflII	CTTAAG	1 cut(s)	1771
AjnI	CCWGG	2 cut(s)	369, 888
AjuI	GAANNNNNNNTTGG	2 cut(s)	1650, 1682
AleI	CACNNNNGTG	1 cut(s)	201
AloI	GAACNNNNNNTCC	2 cut(s)	638, 670
Alw21I	GWGCWC	2 cut(s)	493, 685
Alw26I	GTCTC	6 cut(s)	21, 182, 203, 714, 738, 801
Alw44I	GTGCAC	1 cut(s)	489
AlwI	GGATC	1 cut(s)	2013
AlwNI	CAGNNNCTG	2 cut(s)	1240, 1985
Aor13HI	TCCGGA	2 cut(s)	116, 2031
AoxI	GGCC	6 cut(s)	166, 541, 902, 1389, 1821, 2105
ApaI	GGGCCC	1 cut(s)	2109
ApaLI	GTGCAC	1 cut(s)	489
ApeKI	GCWGC	5 cut(s)	8, 839, 1214, 1262, 2183
ApoI	RAATTY	6 cut(s)	126, 1255, 1270, 1998, 2118, 2364
ArsI	GACNNNNNNTTYG	3 cut(s)	27, 2180, 2212
AseI	ATTAAT	1 cut(s)	1106
Asp700I	GAANNNNTTC	3 cut(s)	1230, 1630, 1810
AspLEI	GCGC	1 cut(s)	607
AspS9I	GGNCC	4 cut(s)	892, 1971, 2105, 2106
AsuC2I	CCSGG	1 cut(s)	486
AsuHPI	GGTGA	4 cut(s)	154, 238, 795, 1418
AsuNHI	GCTAGC	2 cut(s)	607, 976
AvaII	GGWCC	2 cut(s)	892, 1971
BaeGI	GKGCMC	2 cut(s)	493, 2109
BalI	TGGCCA	2 cut(s)	904, 1391
BanII	GRGCYC	1 cut(s)	2109
BauI	CACGAG	2 cut(s)	678, 1368
BbsI	GAAGAC	5 cut(s)	683, 829, 2004, 2067, 2397
Bbv12I	GWGCWC	2 cut(s)	493, 685
BbvI	GCAGC	4 cut(s)	851, 1201, 1249, 2170
BccI	CCATC	3 cut(s)	304, 943, 1688
BcgI	CGANNNNNNTGC	2 cut(s)	1299, 1333
BciT130I	CCWGG	2 cut(s)	371, 890
BciVI	GTATCC	1 cut(s)	1291
BcnI	CCSGG	1 cut(s)	486
BcoDI	GTCTC	6 cut(s)	21, 182, 203, 714, 738, 801
BfaI	CTAG	7 cut(s)	132, 608, 674, 977, 1007, 1892, 1922
BfoI	RGCGCY	1 cut(s)	608
BfrI	CTTAAG	1 cut(s)	1771
BfuAI	ACCTGC	2 cut(s)	775, 1982
BfuI	GTATCC	1 cut(s)	1291
BisI	GCNGC	8 cut(s)	9, 169, 544, 840, 1215, 1263, 2184, 2307
BlpI	GCTNAGC	2 cut(s)	29, 570
BlsI	GCNGC	8 cut(s)	10, 170, 545, 841, 1216, 1264, 2185, 2308
Bme1390I	CCNGG	3 cut(s)	371, 486, 890
Bme18I	GGWCC	2 cut(s)	892, 1971
BmgT120I	GGNCC	4 cut(s)	892, 1971, 2105, 2106
BmiI	GGNNCC	4 cut(s)	149, 1972, 2106, 2107
BmrFI	CCNGG	3 cut(s)	371, 486, 890
BmrI	ACTGGG	1 cut(s)	1088
BmsI	GCATC	9 cut(s)	343, 556, 568, 1154, 1330, 1649, 1972, 2142, 2170
BmtI	GCTAGC	2 cut(s)	611, 980
BmuI	ACTGGG	1 cut(s)	1088
BpiI	GAAGAC	5 cut(s)	683, 829, 2004, 2067, 2397
BpmI	CTGGAG	4 cut(s)	82, 193, 1761, 1810
Bpu1102I	GCTNAGC	2 cut(s)	29, 570
BpuEI	CTTGAG	1 cut(s)	1190
BpuMI	CCSGG	1 cut(s)	486
BsaBI	GATNNNNATC	1 cut(s)	1887
BsaJI	CCNNGG	7 cut(s)	370, 470, 658, 965, 1195, 1678, 2236
BsaWI	WCCGGW	2 cut(s)	116, 2031
BsaXI	ACNNNNNCTCC	6 cut(s)	202, 232, 1704, 1734, 2395, 2425
Bsc4I	CCNNNNNNNGG	2 cut(s)	171, 1201
Bse118I	RCCGGY	1 cut(s)	164
Bse1I	ACTGG	6 cut(s)	99, 905, 1083, 1621, 1827, 1964
Bse3DI	GCAATG	1 cut(s)	2081
Bse8I	GATNNNNATC	1 cut(s)	1887
BseAI	TCCGGA	2 cut(s)	116, 2031
BseBI	CCWGG	2 cut(s)	371, 890
BseDI	CCNNGG	7 cut(s)	370, 470, 658, 965, 1195, 1678, 2236
BseGI	GGATG	7 cut(s)	358, 391, 441, 559, 976, 1345, 1699
BseJI	GATNNNNATC	1 cut(s)	1887
BseLI	CCNNNNNNNGG	2 cut(s)	171, 1201
BseMI	GCAATG	1 cut(s)	2081
BseMII	CTCAG	7 cut(s)	273, 698, 749, 798, 812, 1992, 2319
BseNI	ACTGG	6 cut(s)	99, 905, 1083, 1621, 1827, 1964
BseRI	GAGGAG	5 cut(s)	207, 210, 770, 843, 1725
BseSI	GKGCMC	2 cut(s)	493, 2109
BseX3I	CGGCCG	1 cut(s)	166
BseXI	GCAGC	4 cut(s)	851, 1201, 1249, 2170
BsgI	GTGCAG	1 cut(s)	1248
Bsh1236I	CGCG	1 cut(s)	546
Bsh1285I	CGRYCG	1 cut(s)	169
BshFI	GGCC	6 cut(s)	168, 543, 904, 1391, 1823, 2107
BsiEI	CGRYCG	1 cut(s)	169
BsiHKAI	GWGCWC	2 cut(s)	493, 685
BsiSI	CCGG	4 cut(s)	117, 165, 486, 2032
BslFI	GGGAC	6 cut(s)	640, 879, 1570, 1581, 1880, 1984
BslI	CCNNNNNNNGG	2 cut(s)	171, 1201
BsmAI	GTCTC	6 cut(s)	21, 182, 203, 714, 738, 801
BsmFI	GGGAC	6 cut(s)	640, 879, 1570, 1581, 1880, 1984
BsmI	GAATGC	2 cut(s)	33, 817
BsnI	GGCC	6 cut(s)	168, 543, 904, 1391, 1823, 2107
Bsp120I	GGGCCC	1 cut(s)	2105
Bsp1286I	GDGCHC	3 cut(s)	493, 685, 2109
Bsp13I	TCCGGA	2 cut(s)	116, 2031
Bsp1407I	TGTACA	1 cut(s)	773
Bsp143I	GATC	7 cut(s)	362, 586, 955, 1159, 1585, 2005, 2283
Bsp1720I	GCTNAGC	2 cut(s)	29, 570
Bsp19I	CCATGG	1 cut(s)	965
BspACI	CCGC	6 cut(s)	169, 544, 611, 1217, 1880, 2306
BspANI	GGCC	6 cut(s)	168, 543, 904, 1391, 1823, 2107
BspCNI	CTCAG	7 cut(s)	274, 697, 748, 799, 811, 1991, 2320
BspEI	TCCGGA	2 cut(s)	116, 2031
BspFNI	CGCG	1 cut(s)	546
BspHI	TCATGA	2 cut(s)	583, 2113
BspLI	GGNNCC	4 cut(s)	149, 1972, 2106, 2107
BspMI	ACCTGC	2 cut(s)	775, 1982
BspOI	GCTAGC	2 cut(s)	611, 980
BspPI	GGATC	1 cut(s)	2013
BspTI	CTTAAG	1 cut(s)	1771
BsrDI	GCAATG	1 cut(s)	2081
BsrFI	RCCGGY	1 cut(s)	164
BsrGI	TGTACA	1 cut(s)	773
BsrI	ACTGG	6 cut(s)	99, 905, 1083, 1621, 1827, 1964
BssAI	RCCGGY	1 cut(s)	164
BssECI	CCNNGG	7 cut(s)	370, 470, 658, 965, 1195, 1678, 2236
BssMI	GATC	7 cut(s)	362, 586, 955, 1159, 1585, 2005, 2283
BssSI	CACGAG	2 cut(s)	678, 1368
BssT1I	CCWWGG	5 cut(s)	470, 658, 965, 1195, 2236
Bst2BI	CACGAG	2 cut(s)	678, 1368
Bst2UI	CCWGG	2 cut(s)	371, 890
Bst4CI	ACNGT	7 cut(s)	152, 232, 1057, 1679, 1870, 2229, 2396
Bst6I	CTCTTC	2 cut(s)	314, 1546
BstAFI	CTTAAG	1 cut(s)	1771
BstAUI	TGTACA	1 cut(s)	773
BstC8I	GCNNGC	9 cut(s)	424, 609, 762, 978, 1094, 1673, 1927, 2082, 2169
BstDSI	CCRYGG	2 cut(s)	965, 1678
BstENI	CCTNNNNNAGG	1 cut(s)	1199
BstF5I	GGATG	7 cut(s)	358, 391, 441, 559, 976, 1345, 1699
BstFNI	CGCG	1 cut(s)	546
BstH2I	RGCGCY	1 cut(s)	608
BstHHI	GCGC	1 cut(s)	607
BstKTI	GATC	7 cut(s)	365, 589, 958, 1162, 1588, 2008, 2286
BstMAI	GTCTC	6 cut(s)	21, 182, 203, 714, 738, 801
BstMBI	GATC	7 cut(s)	362, 586, 955, 1159, 1585, 2005, 2283
BstMCI	CGRYCG	1 cut(s)	169
BstNI	CCWGG	2 cut(s)	371, 890
BstNSI	RCATGY	2 cut(s)	796, 1675
BstSCI	CCNGG	3 cut(s)	369, 484, 888
BstSLI	GKGCMC	2 cut(s)	493, 2109
BstUI	CGCG	1 cut(s)	546
BstV1I	GCAGC	4 cut(s)	851, 1201, 1249, 2170
BstV2I	GAAGAC	5 cut(s)	683, 829, 2004, 2067, 2397
BstX2I	RGATCY	1 cut(s)	2005
BstXI	CCANNNNNNTGG	1 cut(s)	263
BstYI	RGATCY	1 cut(s)	2005
BstZI	CGGCCG	1 cut(s)	166
BsuI	GTATCC	1 cut(s)	1291
BsuRI	GGCC	6 cut(s)	168, 543, 904, 1391, 1823, 2107
BtgI	CCRYGG	2 cut(s)	965, 1678
BtsCI	GGATG	7 cut(s)	358, 391, 441, 559, 976, 1345, 1699
BtsI	GCAGTG	2 cut(s)	1485, 1627
BtsIMutI	CAGTG	8 cut(s)	106, 312, 692, 1076, 1485, 1627, 1971, 2168
BveI	ACCTGC	2 cut(s)	775, 1982
Cac8I	GCNNGC	9 cut(s)	424, 609, 762, 978, 1094, 1673, 1927, 2082, 2169
CaiI	CAGNNNCTG	2 cut(s)	1240, 1985
CciI	TCATGA	2 cut(s)	583, 2113
CfoI	GCGC	1 cut(s)	607
Cfr10I	RCCGGY	1 cut(s)	164
Cfr13I	GGNCC	4 cut(s)	892, 1971, 2105, 2106
Csp6I	GTAC	1 cut(s)	774
CspCI	CAANNNNNGTGG	4 cut(s)	1437, 1472, 1474, 1509
CviAII	CATG	8 cut(s)	477, 584, 793, 885, 906, 966, 1672, 2114
CviQI	GTAC	1 cut(s)	774
DpnI	GATC	7 cut(s)	364, 588, 957, 1161, 1587, 2007, 2285
DpnII	GATC	7 cut(s)	362, 586, 955, 1159, 1585, 2005, 2283
EaeI	YGGCCR	4 cut(s)	166, 541, 902, 1389
EagI	CGGCCG	1 cut(s)	166
Eam1104I	CTCTTC	2 cut(s)	314, 1546
EarI	CTCTTC	2 cut(s)	314, 1546
EclXI	CGGCCG	1 cut(s)	166
Eco130I	CCWWGG	5 cut(s)	470, 658, 965, 1195, 2236
Eco147I	AGGCCT	1 cut(s)	1823
Eco24I	GRGCYC	1 cut(s)	2109
Eco47I	GGWCC	2 cut(s)	892, 1971
Eco52I	CGGCCG	1 cut(s)	166
Eco57I	CTGAAG	5 cut(s)	927, 1217, 1355, 2079, 2115
EcoNI	CCTNNNNNAGG	1 cut(s)	1199
EcoO109I	RGGNCCY	2 cut(s)	1971, 2105
EcoRII	CCWGG	2 cut(s)	369, 888
EcoT14I	CCWWGG	5 cut(s)	470, 658, 965, 1195, 2236
EcoT22I	ATGCAT	1 cut(s)	1642
EcoT38I	GRGCYC	1 cut(s)	2109
ErhI	CCWWGG	5 cut(s)	470, 658, 965, 1195, 2236
FaeI	CATG	8 cut(s)	480, 587, 796, 888, 909, 969, 1675, 2117
FalI	AAGNNNNNCTT	8 cut(s)	510, 542, 1229, 1261, 1717, 1749, 2201, 2233
FaqI	GGGAC	6 cut(s)	640, 879, 1570, 1581, 1880, 1984
FatI	CATG	8 cut(s)	476, 583, 792, 884, 905, 965, 1671, 2113
FauNDI	CATATG	1 cut(s)	1533
Fnu4HI	GCNGC	8 cut(s)	9, 169, 544, 840, 1215, 1263, 2184, 2307
FokI	GGATG	7 cut(s)	365, 398, 428, 546, 983, 1352, 1706
FriOI	GRGCYC	1 cut(s)	2109
Fsp4HI	GCNGC	8 cut(s)	9, 169, 544, 840, 1215, 1263, 2184, 2307
FspBI	CTAG	7 cut(s)	132, 608, 674, 977, 1007, 1892, 1922
GlaI	GCGC	1 cut(s)	606
GluI	GCNGC	8 cut(s)	9, 169, 544, 840, 1215, 1263, 2184, 2307
GsuI	CTGGAG	4 cut(s)	82, 193, 1761, 1810
HaeII	RGCGCY	1 cut(s)	608
HaeIII	GGCC	6 cut(s)	168, 543, 904, 1391, 1823, 2107
HapII	CCGG	4 cut(s)	117, 165, 486, 2032
HhaI	GCGC	1 cut(s)	607
Hin1II	CATG	8 cut(s)	480, 587, 796, 888, 909, 969, 1675, 2117
Hin6I	GCGC	1 cut(s)	605
HinP1I	GCGC	1 cut(s)	605
HincII	GTYRAC	1 cut(s)	1779
HindII	GTYRAC	1 cut(s)	1779
HindIII	AAGCTT	6 cut(s)	398, 524, 1176, 1229, 1686, 1940
HpaI	GTTAAC	1 cut(s)	1779
HpaII	CCGG	4 cut(s)	117, 165, 486, 2032
HphI	GGTGA	4 cut(s)	154, 238, 795, 1418
Hpy166II	GTNNAC	2 cut(s)	491, 1779
Hpy8I	GTNNAC	2 cut(s)	491, 1779
HpyAV	CCTTC	6 cut(s)	332, 509, 1279, 1330, 1783, 2408
HpyCH4III	ACNGT	7 cut(s)	152, 232, 1057, 1679, 1870, 2229, 2396
HpyCH4IV	ACGT	2 cut(s)	1071, 1905
HpySE526I	ACGT	2 cut(s)	1071, 1905
Hsp92II	CATG	8 cut(s)	480, 587, 796, 888, 909, 969, 1675, 2117
HspAI	GCGC	1 cut(s)	605
Kpn2I	TCCGGA	2 cut(s)	116, 2031
KspAI	GTTAAC	1 cut(s)	1779
Kzo9I	GATC	7 cut(s)	362, 586, 955, 1159, 1585, 2005, 2283
LmnI	GCTCC	4 cut(s)	220, 757, 830, 1450
Lsp1109I	GCAGC	4 cut(s)	851, 1201, 1249, 2170
LweI	GCATC	9 cut(s)	343, 556, 568, 1154, 1330, 1649, 1972, 2142, 2170
MaeI	CTAG	7 cut(s)	132, 608, 674, 977, 1007, 1892, 1922
MaeII	ACGT	2 cut(s)	1071, 1905
MaeIII	GTNAC	5 cut(s)	244, 251, 801, 1002, 1406
MalI	GATC	7 cut(s)	364, 588, 957, 1161, 1587, 2007, 2285
MboI	GATC	7 cut(s)	362, 586, 955, 1159, 1585, 2005, 2283
MfeI	CAATTG	2 cut(s)	834, 1652
MflI	RGATCY	1 cut(s)	2005
MhlI	GDGCHC	3 cut(s)	493, 685, 2109
MlsI	TGGCCA	2 cut(s)	904, 1391
MluNI	TGGCCA	2 cut(s)	904, 1391
MlyI	GAGTC	4 cut(s)	107, 184, 1358, 2141
MmeI	TCCRAC	3 cut(s)	1302, 1479, 2245
Mox20I	TGGCCA	2 cut(s)	904, 1391
Mph1103I	ATGCAT	1 cut(s)	1642
MroI	TCCGGA	2 cut(s)	116, 2031
MroXI	GAANNNNTTC	3 cut(s)	1230, 1630, 1810
MscI	TGGCCA	2 cut(s)	904, 1391
MslI	CAYNNNNRTG	2 cut(s)	201, 564
Msp20I	TGGCCA	2 cut(s)	904, 1391
MspA1I	CMGCKG	4 cut(s)	8, 171, 1562, 2024
MspCI	CTTAAG	1 cut(s)	1771
MspI	CCGG	4 cut(s)	117, 165, 486, 2032
MspR9I	CCNGG	3 cut(s)	371, 486, 890
MunI	CAATTG	2 cut(s)	834, 1652
Mva1269I	GAATGC	2 cut(s)	33, 817
MvaI	CCWGG	2 cut(s)	371, 890
MvnI	CGCG	1 cut(s)	546
NciI	CCSGG	1 cut(s)	486
NcoI	CCATGG	1 cut(s)	965
NdeI	CATATG	1 cut(s)	1533
NdeII	GATC	7 cut(s)	362, 586, 955, 1159, 1585, 2005, 2283
NheI	GCTAGC	2 cut(s)	607, 976
NlaIII	CATG	8 cut(s)	480, 587, 796, 888, 909, 969, 1675, 2117
NlaIV	GGNNCC	4 cut(s)	149, 1972, 2106, 2107
NmuCI	GTSAC	4 cut(s)	244, 801, 1002, 1406
NsiI	ATGCAT	1 cut(s)	1642
NspI	RCATGY	2 cut(s)	796, 1675
OliI	CACNNNNGTG	1 cut(s)	201
PaeI	GCATGC	1 cut(s)	1675
PagI	TCATGA	2 cut(s)	583, 2113
PaqCI	CACCTGC	1 cut(s)	775
PceI	AGGCCT	1 cut(s)	1823
PcsI	WCGNNNNNNNCGW	1 cut(s)	2292
PctI	GAATGC	2 cut(s)	33, 817
PdmI	GAANNNNTTC	3 cut(s)	1230, 1630, 1810
PkrI	GCNGC	8 cut(s)	10, 170, 545, 841, 1216, 1264, 2185, 2308
PleI	GAGTC	4 cut(s)	107, 183, 1358, 2141
PpsI	GAGTC	4 cut(s)	107, 183, 1358, 2141
PpuMI	RGGWCCY	1 cut(s)	1971
PshBI	ATTAAT	1 cut(s)	1106
Psp5II	RGGWCCY	1 cut(s)	1971
Psp6I	CCWGG	2 cut(s)	369, 888
PspGI	CCWGG	2 cut(s)	369, 888
PspN4I	GGNNCC	4 cut(s)	149, 1972, 2106, 2107
PspOMI	GGGCCC	1 cut(s)	2105
PspPI	GGNCC	4 cut(s)	892, 1971, 2105, 2106
PspPPI	RGGWCCY	1 cut(s)	1971
PstNI	CAGNNNCTG	2 cut(s)	1240, 1985
PsuI	RGATCY	1 cut(s)	2005
PvuII	CAGCTG	3 cut(s)	8, 1562, 2024
RsaI	GTAC	1 cut(s)	775
RsaNI	GTAC	1 cut(s)	774
RseI	CAYNNNNRTG	2 cut(s)	201, 564
SatI	GCNGC	8 cut(s)	9, 169, 544, 840, 1215, 1263, 2184, 2307
Sau3AI	GATC	7 cut(s)	362, 586, 955, 1159, 1585, 2005, 2283
Sau96I	GGNCC	4 cut(s)	892, 1971, 2105, 2106
SchI	GAGTC	4 cut(s)	107, 184, 1358, 2141
ScrFI	CCNGG	3 cut(s)	371, 486, 890
SduI	GDGCHC	3 cut(s)	493, 685, 2109
SfaNI	GCATC	9 cut(s)	343, 556, 568, 1154, 1330, 1649, 1972, 2142, 2170
SinI	GGWCC	2 cut(s)	892, 1971
SmiMI	CAYNNNNRTG	2 cut(s)	201, 564
SmlI	CTYRAG	2 cut(s)	1169, 1771
SmoI	CTYRAG	2 cut(s)	1169, 1771
SphI	GCATGC	1 cut(s)	1675
SseBI	AGGCCT	1 cut(s)	1823
SsiI	CCGC	6 cut(s)	169, 544, 611, 1217, 1880, 2306
SspI	AATATT	2 cut(s)	430, 1605
SspMI	CTAG	7 cut(s)	132, 608, 674, 977, 1007, 1892, 1922
StuI	AGGCCT	1 cut(s)	1823
StyD4I	CCNGG	3 cut(s)	369, 484, 888
StyI	CCWWGG	5 cut(s)	470, 658, 965, 1195, 2236
TaaI	ACNGT	7 cut(s)	152, 232, 1057, 1679, 1870, 2229, 2396
TaiI	ACGT	2 cut(s)	1074, 1908
TaqI	TCGA	5 cut(s)	189, 207, 1515, 2150, 2286
TatI	WGTACW	1 cut(s)	773
TauI	GCSGC	3 cut(s)	171, 546, 2309
TscAI	CASTG	8 cut(s)	106, 312, 692, 1083, 1492, 1627, 1971, 2168
TseFI	GTSAC	4 cut(s)	244, 801, 1002, 1406
TseI	GCWGC	5 cut(s)	8, 839, 1214, 1262, 2183
Tsp45I	GTSAC	4 cut(s)	244, 801, 1002, 1406
TspGWI	ACGGA	2 cut(s)	27, 1519
TspRI	CASTG	8 cut(s)	106, 312, 692, 1083, 1492, 1627, 1971, 2168
Vha464I	CTTAAG	1 cut(s)	1771
VneI	GTGCAC	1 cut(s)	489
VpaK11BI	GGWCC	2 cut(s)	892, 1971
VspI	ATTAAT	1 cut(s)	1106
XagI	CCTNNNNNAGG	1 cut(s)	1199
XapI	RAATTY	6 cut(s)	126, 1255, 1270, 1998, 2118, 2364
XceI	RCATGY	2 cut(s)	796, 1675
XmnI	GAANNNNTTC	3 cut(s)	1230, 1630, 1810
XspI	CTAG	7 cut(s)	132, 608, 674, 977, 1007, 1892, 1922
Zsp2I	ATGCAT	1 cut(s)	1642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.