isoform X1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54500 AT3G54500 AT3G54500 AT3G54500 AT3G54500 AT3G54500 AT3G54500 AT3G54500 |
| fragaria_vesca | FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 |
| malus_domestica | MD02G1290900.v1.1 MD07G1036600.v1.1 |
| prunus_persica | Prupe.2G032000_v2.0.a1 Prupe.2G032000_v2.0.a1 Prupe.2G032000_v2.0.a1 Prupe.2G032000_v2.0.a1 |
| pyrus_communis | pycom02g24590 pycom07g02520 pycom11g13590 |
| rosa_chinensis | RchiOBHm_Chr1g0321761 |
| rosa_laevigata | RLG00000030406 |
| rosa_multiflora | Rmu_sc0003410.1_g000034 Rmu_sc0003909.1_g000003 |
| rosa_rugosa | Rorug01G0034100 |
| rosa_samantha | Rh1AG046700 Rh1BG045200 Rh1CG050800 Rh1DG055100 |
| rosa_wichuraiana | Rw1G004190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 41 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 166 |
| Acc36I | ACCTGC | 1 cut(s) | 41 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 656 |
| AccIII | TCCGGA | 1 cut(s) | 2050 |
| AciI | CCGC | 3 cut(s) | 705, 1288, 1633 |
| AclWI | GGATC | 2 cut(s) | 1043, 1960 |
| AcoI | YGGCCR | 1 cut(s) | 263 |
| AcuI | CTGAAG | 3 cut(s) | 534, 1218, 1943 |
| AfaI | GTAC | 3 cut(s) | 934, 1444, 1610 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 656, 1949, 2018, 2057 |
| AflII | CTTAAG | 1 cut(s) | 1438 |
| AgeI | ACCGGT | 1 cut(s) | 1611 |
| AjnI | CCWGG | 2 cut(s) | 649, 1147 |
| Alw26I | GTCTC | 3 cut(s) | 1024, 1260, 1748 |
| AlwI | GGATC | 2 cut(s) | 1043, 1960 |
| Aor13HI | TCCGGA | 1 cut(s) | 2050 |
| AoxI | GGCC | 4 cut(s) | 263, 402, 938, 1381 |
| ApeKI | GCWGC | 3 cut(s) | 1085, 1291, 1505 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 443, 475 |
| AseI | ATTAAT | 1 cut(s) | 869 |
| AsiGI | ACCGGT | 1 cut(s) | 1611 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 348, 1908 |
| AspS9I | GGNCC | 7 cut(s) | 168, 402, 1043, 1382, 1459, 1993, 2048 |
| AsuHPI | GGTGA | 9 cut(s) | 65, 353, 392, 549, 637, 1047, 1700, 1833, 1900 |
| AvaII | GGWCC | 5 cut(s) | 168, 1043, 1459, 1993, 2048 |
| BalI | TGGCCA | 1 cut(s) | 265 |
| BanII | GRGCYC | 1 cut(s) | 1983 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 925, 957, 1435, 1467 |
| BauI | CACGAG | 1 cut(s) | 259 |
| BbsI | GAAGAC | 2 cut(s) | 164, 492 |
| BbvCI | CCTCAGC | 2 cut(s) | 315, 1527 |
| BbvI | GCAGC | 3 cut(s) | 1097, 1303, 1517 |
| BccI | CCATC | 7 cut(s) | 146, 332, 393, 658, 1126, 1368, 2051 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 8, 42 |
| BciT130I | CCWGG | 2 cut(s) | 651, 1149 |
| BciVI | GTATCC | 1 cut(s) | 1525 |
| BclI | TGATCA | 3 cut(s) | 64, 712, 1516 |
| BcoDI | GTCTC | 3 cut(s) | 1024, 1260, 1748 |
| BfaI | CTAG | 7 cut(s) | 507, 855, 1353, 1368, 1647, 1656, 2040 |
| BfmI | CTRYAG | 4 cut(s) | 689, 1011, 1298, 1503 |
| BfrI | CTTAAG | 1 cut(s) | 1438 |
| BfuAI | ACCTGC | 1 cut(s) | 41 |
| BfuI | GTATCC | 1 cut(s) | 1525 |
| BisI | GCNGC | 5 cut(s) | 705, 1086, 1289, 1292, 1506 |
| BlsI | GCNGC | 5 cut(s) | 706, 1087, 1290, 1293, 1507 |
| BmcAI | AGTACT | 1 cut(s) | 1444 |
| Bme1390I | CCNGG | 2 cut(s) | 651, 1149 |
| Bme18I | GGWCC | 5 cut(s) | 168, 1043, 1459, 1993, 2048 |
| BmgT120I | GGNCC | 7 cut(s) | 168, 402, 1043, 1382, 1459, 1993, 2048 |
| BmiI | GGNNCC | 4 cut(s) | 169, 1106, 1461, 1995 |
| BmrFI | CCNGG | 2 cut(s) | 651, 1149 |
| BmrI | ACTGGG | 2 cut(s) | 1084, 1977 |
| BmsI | GCATC | 4 cut(s) | 502, 1171, 1841, 2045 |
| BmuI | ACTGGG | 2 cut(s) | 1084, 1977 |
| BpiI | GAAGAC | 2 cut(s) | 164, 492 |
| BpmI | CTGGAG | 1 cut(s) | 750 |
| Bpu10I | CCTNAGC | 3 cut(s) | 315, 1527, 1977 |
| BpuEI | CTTGAG | 2 cut(s) | 1245, 1371 |
| BsaI | GGTCTC | 1 cut(s) | 1748 |
| BsaJI | CCNNGG | 5 cut(s) | 163, 649, 747, 1148, 1948 |
| BsaWI | WCCGGW | 3 cut(s) | 432, 1611, 2050 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1240, 1270 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 656, 1949, 2018, 2057 |
| Bse118I | RCCGGY | 1 cut(s) | 1611 |
| Bse1I | ACTGG | 7 cut(s) | 222, 637, 1090, 1491, 1983, 2007, 2050 |
| Bse3DI | GCAATG | 5 cut(s) | 451, 472, 914, 1311, 1635 |
| BseAI | TCCGGA | 1 cut(s) | 2050 |
| BseBI | CCWGG | 2 cut(s) | 651, 1149 |
| BseDI | CCNNGG | 5 cut(s) | 163, 649, 747, 1148, 1948 |
| BseGI | GGATG | 2 cut(s) | 404, 2059 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 656, 1949, 2018, 2057 |
| BseMI | GCAATG | 5 cut(s) | 451, 472, 914, 1311, 1635 |
| BseMII | CTCAG | 6 cut(s) | 306, 585, 1518, 1536, 1968, 2040 |
| BseNI | ACTGG | 7 cut(s) | 222, 637, 1090, 1491, 1983, 2007, 2050 |
| BseRI | GAGGAG | 3 cut(s) | 35, 920, 1248 |
| BseXI | GCAGC | 3 cut(s) | 1097, 1303, 1517 |
| BsgI | GTGCAG | 2 cut(s) | 597, 1104 |
| BshFI | GGCC | 4 cut(s) | 265, 404, 940, 1383 |
| BshTI | ACCGGT | 1 cut(s) | 1611 |
| BsiSI | CCGG | 3 cut(s) | 433, 1612, 2051 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 656, 1949, 2018, 2057 |
| BsmAI | GTCTC | 3 cut(s) | 1024, 1260, 1748 |
| BsmI | GAATGC | 5 cut(s) | 592, 700, 814, 1207, 1910 |
| BsnI | GGCC | 4 cut(s) | 265, 404, 940, 1383 |
| Bso31I | GGTCTC | 1 cut(s) | 1748 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1983 |
| Bsp13I | TCCGGA | 1 cut(s) | 2050 |
| Bsp143I | GATC | 8 cut(s) | 64, 424, 712, 1048, 1420, 1516, 1768, 1952 |
| Bsp19I | CCATGG | 2 cut(s) | 163, 747 |
| BspACI | CCGC | 3 cut(s) | 705, 1288, 1633 |
| BspANI | GGCC | 4 cut(s) | 265, 404, 940, 1383 |
| BspCNI | CTCAG | 6 cut(s) | 307, 586, 1519, 1535, 1969, 2039 |
| BspEI | TCCGGA | 1 cut(s) | 2050 |
| BspLI | GGNNCC | 4 cut(s) | 169, 1106, 1461, 1995 |
| BspMAI | CTGCAG | 2 cut(s) | 693, 1507 |
| BspMI | ACCTGC | 1 cut(s) | 41 |
| BspPI | GGATC | 2 cut(s) | 1043, 1960 |
| BspQI | GCTCTTC | 1 cut(s) | 1796 |
| BspTI | CTTAAG | 1 cut(s) | 1438 |
| BspTNI | GGTCTC | 1 cut(s) | 1748 |
| BsrDI | GCAATG | 5 cut(s) | 451, 472, 914, 1311, 1635 |
| BsrFI | RCCGGY | 1 cut(s) | 1611 |
| BsrI | ACTGG | 7 cut(s) | 222, 637, 1090, 1491, 1983, 2007, 2050 |
| BssAI | RCCGGY | 1 cut(s) | 1611 |
| BssECI | CCNNGG | 5 cut(s) | 163, 649, 747, 1148, 1948 |
| BssMI | GATC | 8 cut(s) | 64, 424, 712, 1048, 1420, 1516, 1768, 1952 |
| BssSI | CACGAG | 1 cut(s) | 259 |
| BssT1I | CCWWGG | 3 cut(s) | 163, 747, 1948 |
| Bst2BI | CACGAG | 1 cut(s) | 259 |
| Bst2UI | CCWGG | 2 cut(s) | 651, 1149 |
| Bst4CI | ACNGT | 5 cut(s) | 524, 762, 1474, 1777, 1919 |
| Bst6I | CTCTTC | 3 cut(s) | 1022, 1452, 1796 |
| BstAFI | CTTAAG | 1 cut(s) | 1438 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1310 |
| BstC8I | GCNNGC | 3 cut(s) | 27, 1311, 1882 |
| BstDEI | CTNAG | 6 cut(s) | 315, 594, 1522, 1527, 1977, 2026 |
| BstDSI | CCRYGG | 2 cut(s) | 163, 747 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1947 |
| BstF5I | GGATG | 2 cut(s) | 404, 2059 |
| BstKTI | GATC | 8 cut(s) | 67, 427, 715, 1051, 1423, 1519, 1771, 1955 |
| BstMAI | GTCTC | 3 cut(s) | 1024, 1260, 1748 |
| BstMBI | GATC | 8 cut(s) | 64, 424, 712, 1048, 1420, 1516, 1768, 1952 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 287, 704, 1310, 1625, 1944 |
| BstNI | CCWGG | 2 cut(s) | 651, 1149 |
| BstNSI | RCATGY | 2 cut(s) | 704, 1130 |
| BstSCI | CCNGG | 2 cut(s) | 649, 1147 |
| BstSFI | CTRYAG | 4 cut(s) | 689, 1011, 1298, 1503 |
| BstV1I | GCAGC | 3 cut(s) | 1097, 1303, 1517 |
| BstV2I | GAAGAC | 2 cut(s) | 164, 492 |
| BstX2I | RGATCY | 1 cut(s) | 1952 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1990, 2014 |
| BstYI | RGATCY | 1 cut(s) | 1952 |
| BsuI | GTATCC | 1 cut(s) | 1525 |
| BsuRI | GGCC | 4 cut(s) | 265, 404, 940, 1383 |
| BtgI | CCRYGG | 2 cut(s) | 163, 747 |
| BtsCI | GGATG | 2 cut(s) | 404, 2059 |
| BtsI | GCAGTG | 1 cut(s) | 1940 |
| BtsIMutI | CAGTG | 3 cut(s) | 229, 1940, 2043 |
| BveI | ACCTGC | 1 cut(s) | 41 |
| Cac8I | GCNNGC | 3 cut(s) | 27, 1311, 1882 |
| Cfr10I | RCCGGY | 1 cut(s) | 1611 |
| Cfr13I | GGNCC | 7 cut(s) | 168, 402, 1043, 1382, 1459, 1993, 2048 |
| CseI | GACGC | 1 cut(s) | 1838 |
| Csp6I | GTAC | 3 cut(s) | 933, 1443, 1609 |
| CspAI | ACCGGT | 1 cut(s) | 1611 |
| CviAII | CATG | 8 cut(s) | 164, 701, 716, 748, 991, 1127, 1252, 1863 |
| CviQI | GTAC | 3 cut(s) | 933, 1443, 1609 |
| DdeI | CTNAG | 6 cut(s) | 315, 594, 1522, 1527, 1977, 2026 |
| DpnI | GATC | 8 cut(s) | 66, 426, 714, 1050, 1422, 1518, 1770, 1954 |
| DpnII | GATC | 8 cut(s) | 64, 424, 712, 1048, 1420, 1516, 1768, 1952 |
| DraI | TTTAAA | 1 cut(s) | 2002 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 166 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 166 |
| EaeI | YGGCCR | 1 cut(s) | 263 |
| Eam1104I | CTCTTC | 3 cut(s) | 1022, 1452, 1796 |
| EarI | CTCTTC | 3 cut(s) | 1022, 1452, 1796 |
| Eco130I | CCWWGG | 3 cut(s) | 163, 747, 1948 |
| Eco24I | GRGCYC | 1 cut(s) | 1983 |
| Eco31I | GGTCTC | 1 cut(s) | 1748 |
| Eco47I | GGWCC | 5 cut(s) | 168, 1043, 1459, 1993, 2048 |
| Eco57I | CTGAAG | 3 cut(s) | 534, 1218, 1943 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1947 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1043, 1382 |
| EcoRI | GAATTC | 1 cut(s) | 1807 |
| EcoRII | CCWGG | 2 cut(s) | 649, 1147 |
| EcoT14I | CCWWGG | 3 cut(s) | 163, 747, 1948 |
| EcoT38I | GRGCYC | 1 cut(s) | 1983 |
| ErhI | CCWWGG | 3 cut(s) | 163, 747, 1948 |
| FaeI | CATG | 8 cut(s) | 167, 704, 719, 751, 994, 1130, 1255, 1866 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 164, 196, 940, 972, 1922, 1954 |
| FatI | CATG | 8 cut(s) | 163, 700, 715, 747, 990, 1126, 1251, 1862 |
| FbaI | TGATCA | 3 cut(s) | 64, 712, 1516 |
| Fnu4HI | GCNGC | 5 cut(s) | 705, 1086, 1289, 1292, 1506 |
| FokI | GGATG | 2 cut(s) | 411, 2066 |
| FriOI | GRGCYC | 1 cut(s) | 1983 |
| Fsp4HI | GCNGC | 5 cut(s) | 705, 1086, 1289, 1292, 1506 |
| FspBI | CTAG | 7 cut(s) | 507, 855, 1353, 1368, 1647, 1656, 2040 |
| GluI | GCNGC | 5 cut(s) | 705, 1086, 1289, 1292, 1506 |
| GsuI | CTGGAG | 1 cut(s) | 750 |
| HaeIII | GGCC | 4 cut(s) | 265, 404, 940, 1383 |
| HapII | CCGG | 3 cut(s) | 433, 1612, 2051 |
| HgaI | GACGC | 1 cut(s) | 1838 |
| Hin1II | CATG | 8 cut(s) | 167, 704, 719, 751, 994, 1130, 1255, 1866 |
| HincII | GTYRAC | 1 cut(s) | 391 |
| HindII | GTYRAC | 1 cut(s) | 391 |
| HinfI | GANTC | 7 cut(s) | 128, 257, 269, 554, 998, 1487, 1838 |
| HpaII | CCGG | 3 cut(s) | 433, 1612, 2051 |
| HphI | GGTGA | 9 cut(s) | 65, 353, 392, 549, 637, 1047, 1700, 1833, 1900 |
| Hpy166II | GTNNAC | 6 cut(s) | 299, 391, 962, 1868, 1891, 1993 |
| Hpy8I | GTNNAC | 6 cut(s) | 299, 391, 962, 1868, 1891, 1993 |
| Hpy99I | CGWCG | 1 cut(s) | 20 |
| HpyAV | CCTTC | 8 cut(s) | 106, 221, 359, 951, 977, 1017, 1427, 1461 |
| HpyCH4III | ACNGT | 5 cut(s) | 524, 762, 1474, 1777, 1919 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 287, 704, 1310, 1625, 1944 |
| HpyF3I | CTNAG | 6 cut(s) | 315, 594, 1522, 1527, 1977, 2026 |
| Hsp92II | CATG | 8 cut(s) | 167, 704, 719, 751, 994, 1130, 1255, 1866 |
| Kpn2I | TCCGGA | 1 cut(s) | 2050 |
| Ksp22I | TGATCA | 3 cut(s) | 64, 712, 1516 |
| Kzo9I | GATC | 8 cut(s) | 64, 424, 712, 1048, 1420, 1516, 1768, 1952 |
| LguI | GCTCTTC | 1 cut(s) | 1796 |
| LmnI | GCTCC | 2 cut(s) | 22, 1021 |
| Lsp1109I | GCAGC | 3 cut(s) | 1097, 1303, 1517 |
| LweI | GCATC | 4 cut(s) | 502, 1171, 1841, 2045 |
| MaeI | CTAG | 7 cut(s) | 507, 855, 1353, 1368, 1647, 1656, 2040 |
| MaeIII | GTNAC | 3 cut(s) | 104, 580, 2021 |
| MalI | GATC | 8 cut(s) | 66, 426, 714, 1050, 1422, 1518, 1770, 1954 |
| MboI | GATC | 8 cut(s) | 64, 424, 712, 1048, 1420, 1516, 1768, 1952 |
| MfeI | CAATTG | 2 cut(s) | 977, 1509 |
| MflI | RGATCY | 1 cut(s) | 1952 |
| MhlI | GDGCHC | 1 cut(s) | 1983 |
| MlsI | TGGCCA | 1 cut(s) | 265 |
| MluNI | TGGCCA | 1 cut(s) | 265 |
| MlyI | GAGTC | 2 cut(s) | 251, 548 |
| MmeI | TCCRAC | 4 cut(s) | 177, 349, 870, 1551 |
| Mox20I | TGGCCA | 1 cut(s) | 265 |
| MroI | TCCGGA | 1 cut(s) | 2050 |
| MroXI | GAANNNNTTC | 2 cut(s) | 348, 1908 |
| MscI | TGGCCA | 1 cut(s) | 265 |
| MseI | TTAA | 6 cut(s) | 609, 869, 1158, 1280, 1439, 2001 |
| Msp20I | TGGCCA | 1 cut(s) | 265 |
| MspA1I | CMGCKG | 2 cut(s) | 842, 1526 |
| MspCI | CTTAAG | 1 cut(s) | 1438 |
| MspI | CCGG | 3 cut(s) | 433, 1612, 2051 |
| MspR9I | CCNGG | 2 cut(s) | 651, 1149 |
| MunI | CAATTG | 2 cut(s) | 977, 1509 |
| Mva1269I | GAATGC | 5 cut(s) | 592, 700, 814, 1207, 1910 |
| MvaI | CCWGG | 2 cut(s) | 651, 1149 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 287, 704, 1310, 1625, 1944 |
| NcoI | CCATGG | 2 cut(s) | 163, 747 |
| NdeII | GATC | 8 cut(s) | 64, 424, 712, 1048, 1420, 1516, 1768, 1952 |
| NlaIII | CATG | 8 cut(s) | 167, 704, 719, 751, 994, 1130, 1255, 1866 |
| NlaIV | GGNNCC | 4 cut(s) | 169, 1106, 1461, 1995 |
| NspI | RCATGY | 2 cut(s) | 704, 1130 |
| PaqCI | CACCTGC | 1 cut(s) | 41 |
| PciSI | GCTCTTC | 1 cut(s) | 1796 |
| PctI | GAATGC | 5 cut(s) | 592, 700, 814, 1207, 1910 |
| PdmI | GAANNNNTTC | 2 cut(s) | 348, 1908 |
| PfeI | GAWTC | 5 cut(s) | 128, 269, 998, 1487, 1838 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 656 |
| PinAI | ACCGGT | 1 cut(s) | 1611 |
| PkrI | GCNGC | 5 cut(s) | 706, 1087, 1290, 1293, 1507 |
| PleI | GAGTC | 2 cut(s) | 251, 548 |
| PpsI | GAGTC | 2 cut(s) | 251, 548 |
| PpuMI | RGGWCCY | 1 cut(s) | 1043 |
| PshBI | ATTAAT | 1 cut(s) | 869 |
| Psp5II | RGGWCCY | 1 cut(s) | 1043 |
| Psp6I | CCWGG | 2 cut(s) | 649, 1147 |
| PspGI | CCWGG | 2 cut(s) | 649, 1147 |
| PspN4I | GGNNCC | 4 cut(s) | 169, 1106, 1461, 1995 |
| PspPI | GGNCC | 7 cut(s) | 168, 402, 1043, 1382, 1459, 1993, 2048 |
| PspPPI | RGGWCCY | 1 cut(s) | 1043 |
| PstI | CTGCAG | 2 cut(s) | 693, 1507 |
| PsuI | RGATCY | 1 cut(s) | 1952 |
| PvuII | CAGCTG | 2 cut(s) | 842, 1526 |
| RsaI | GTAC | 3 cut(s) | 934, 1444, 1610 |
| RsaNI | GTAC | 3 cut(s) | 933, 1443, 1609 |
| SapI | GCTCTTC | 1 cut(s) | 1796 |
| SaqAI | TTAA | 6 cut(s) | 609, 869, 1158, 1280, 1439, 2001 |
| SatI | GCNGC | 5 cut(s) | 705, 1086, 1289, 1292, 1506 |
| Sau3AI | GATC | 8 cut(s) | 64, 424, 712, 1048, 1420, 1516, 1768, 1952 |
| Sau96I | GGNCC | 7 cut(s) | 168, 402, 1043, 1382, 1459, 1993, 2048 |
| ScaI | AGTACT | 1 cut(s) | 1444 |
| SchI | GAGTC | 2 cut(s) | 251, 548 |
| ScrFI | CCNGG | 2 cut(s) | 651, 1149 |
| SduI | GDGCHC | 1 cut(s) | 1983 |
| SfaNI | GCATC | 4 cut(s) | 502, 1171, 1841, 2045 |
| SfcI | CTRYAG | 4 cut(s) | 689, 1011, 1298, 1503 |
| SinI | GGWCC | 5 cut(s) | 168, 1043, 1459, 1993, 2048 |
| SmlI | CTYRAG | 3 cut(s) | 1260, 1386, 1438 |
| SmoI | CTYRAG | 3 cut(s) | 1260, 1386, 1438 |
| SsiI | CCGC | 3 cut(s) | 705, 1288, 1633 |
| SspMI | CTAG | 7 cut(s) | 507, 855, 1353, 1368, 1647, 1656, 2040 |
| StyD4I | CCNGG | 2 cut(s) | 649, 1147 |
| StyI | CCWWGG | 3 cut(s) | 163, 747, 1948 |
| TaaI | ACNGT | 5 cut(s) | 524, 762, 1474, 1777, 1919 |
| TaqI | TCGA | 1 cut(s) | 1771 |
| TatI | WGTACW | 1 cut(s) | 1442 |
| TauI | GCSGC | 2 cut(s) | 707, 1291 |
| TfiI | GAWTC | 5 cut(s) | 128, 269, 998, 1487, 1838 |
| Tru1I | TTAA | 6 cut(s) | 609, 869, 1158, 1280, 1439, 2001 |
| Tru9I | TTAA | 6 cut(s) | 609, 869, 1158, 1280, 1439, 2001 |
| TscAI | CASTG | 3 cut(s) | 229, 1940, 2050 |
| TseI | GCWGC | 3 cut(s) | 1085, 1291, 1505 |
| TspDTI | ATGAA | 7 cut(s) | 261, 378, 849, 933, 979, 1800, 1917 |
| TspGWI | ACGGA | 1 cut(s) | 411 |
| TspRI | CASTG | 3 cut(s) | 229, 1940, 2050 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 656 |
| Vha464I | CTTAAG | 1 cut(s) | 1438 |
| VpaK11BI | GGWCC | 5 cut(s) | 168, 1043, 1459, 1993, 2048 |
| VspI | ATTAAT | 1 cut(s) | 869 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1947 |
| XbaI | TCTAGA | 1 cut(s) | 506 |
| XceI | RCATGY | 2 cut(s) | 704, 1130 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1097, 2014 |
| XmnI | GAANNNNTTC | 2 cut(s) | 348, 1908 |
| XspI | CTAG | 7 cut(s) | 507, 855, 1353, 1368, 1647, 1656, 2040 |
| ZrmI | AGTACT | 1 cut(s) | 1444 |