Rorug01G0034100

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0003539
Physical Location & Seq
Forward (+)
5707452 .. 5762459
55008 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0034100.1

Sequence Viewer

Length: 1980 bp
ATGGTTTTCTCAAGTTTTGGATTTGGAATTTTCCTTTCTATACAACTTCTGGTACTCGTTATCATTGAAGCCGTTGATCTACACTTCGTTTGTTCAAACAACAGCGGTAACTACACCACCGGTAGTGTCTATCAGAAAAACCTCGACGACTTTCTCTCCTCCCTCGTCACTAATAAGAGCAGCAACGGCTATGGCTTCTACAACTCCTCTTTTGGCCAAGACGATGATGTCGTCGACAAGGTTCATGCCATCGGGCTTTGTAGACCGGATCTTATACCGGATGCTTCCCTCAAATCCGTCAAAGACTCGGCATACAATCTCACAAGGGCTTGTCCAAATCAGAAGGAGGCAATCATATGGAATGGGTATTGCATGGTACGCTACTCCAACCGCTCCTTTCATCTTGAGCTTTCTCCTAGTTACAATCAATCGACCACGAGAAACCTATTGTCGTCGGATGTCGATTCATTCAATTCTGAGCTGGAGGACTTAATCAGAGGAATGAAATATCAAGCAGCTGCAGGTGATCTTCGGAAAAAGTTTGCAACGGAAACGAAAAGGGTTACGTATTCCAACAATCAATCAATATCTGGAAGAGTACAGTGCATTCCGGACTTGTCGGAGGAAGAGTGCGGTGTCTGCTTGGGTGAGGGTTTGAGACAGCTTCAGAAATGTTGTAATGGGATGGATTCTGCGACATTTGGTAATCCGAGCTGTAATTTGATGTATGAAGTTTTCACCACCACTGATCCAGCTAAATATAATGAACCACGAGCACTATCTCATCCTACTCCGCCACCAGCCAATGCAACCAAAAATTCAGGAGGAAATAAGAAGAGCAGCACATCTGCAGGGACCGTCATCATTATTGCTATGGCAACGGTTGTTTCCTTCTTGATTCTAATTATGTCCCCCTGCATCTATCTGAGAGTGAAGTATAAAAGGAAAAGAATTGAAGAAAGAGCAGAAGAAATCAAATCTGCGGAAGCTTTGCAATTCGACTTTCGCTCCATTAGAGCTGCCACAAATAACTTTTCGGAAGCAAATAAACTTGGACGGGGAGGATTTGGTATTGTTTACAGGGGTATACTTCCCGATGATAAGGACATAGCGGTTAAAAGGCTTTCGAGGGATTCTGCACAAGGAGATTTAGAATTCAAAACTGAGGTCTCGCTAGTGGCCAGGCTTCAACATAGGAATTTGGTTAGGCTTCTTGGTTTCTGCCTGGGAAAAAATGAAAAGATTCTTGTTTATGAGTTTGTCCCTAACGGAAGTCTTGATCAATTCATATTTGGTGAAGTCAAGCGCGCACATTTGGATTGGGATGTTCGCTACAAAATCATAGTAGGCATTGCGAGAGGGCTCCTTTACCTTCATGAAGATTCTCGTCTTAAAATCATTCACCGTGATCTCAAAGCTAGCAACATTCTATTAGATGCAGACATGAACCCCAAAATTGCAGATTTTGGTATGGCGAGATTGTTTGATCTTGATCAATCACAAGGCGAAACCAGACGAGTTGTGGGAACTTATGGTTATATATCTCCGGAGTATGCTATGAGTGGGATATTTTCTGAAAAATCTGATATCTACAGCTTTGGGGTCTTGGTATTGGAGATTGTTAGCAGCAAGAAGAATAATAGCTTCTATTTATATGACCAACAACTTGGCTTCCTTGCCTATGCTTGGAACTTGTGGAATGAAGGCAAGGCATTGGAGTTAGTAGATGAAGCTTTGGGTGATTCATACTCCTCATCAGAAGTTATGACTTGCATGCATGTTGGGCTTCTTTGTGTACAGGACAATGCTGCAGATAGACCAACTATGGCGGATGTAACTTTAATGCTAAGCAGTGAGAAAGATGGTCCACATCCAAAGAAACCTGTATTCACTATCCAAAACTCCGTTAATCAACCATCCTATGAAAATATTAATTCCTCCAAAAATGAAGCCAGCATTACAATGATCGAAGGACGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

659

Amino Acids

73.42

Weight (kDa)

6.14

Isoelectric Point (pI)

41.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 31 - 131 1.3e-18 Salt stress response/antifungal
Stress-antifung PF01657 152 - 244 5.6e-08 Salt stress response/antifungal
Pkinase PF00069 346 - 545 4.4e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 348 - 613 2.9e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 512
AasI GACNNNNNNGTC 1 cut(s) 227
Acc36I ACCTGC 1 cut(s) 512
AccBSI CCGCTC 1 cut(s) 393
AccI GTMKAC 3 cut(s) 234, 262, 1087
AccII CGCG 1 cut(s) 1308
AccIII TCCGGA 2 cut(s) 610, 1546
AciI CCGC 7 cut(s) 105, 391, 633, 794, 983, 1112, 1829
AclWI GGATC 2 cut(s) 276, 743
AcoI YGGCCR 2 cut(s) 214, 1179
AcsI RAATTY 4 cut(s) 27, 817, 1154, 1198
AcuI CTGAAG 1 cut(s) 650
AfaI GTAC 4 cut(s) 54, 378, 600, 1797
AfiI CCNNNNNNNGG 1 cut(s) 1686
AgeI ACCGGT 1 cut(s) 119
AgsI TTSAA 6 cut(s) 68, 96, 472, 956, 1159, 1190
AjnI CCWGG 2 cut(s) 1181, 1224
Alw21I GWGCWC 1 cut(s) 778
Alw26I GTCTC 2 cut(s) 652, 1174
AlwI GGATC 2 cut(s) 276, 743
Aor13HI TCCGGA 2 cut(s) 610, 1546
AoxI GGCC 2 cut(s) 214, 1179
ApeKI GCWGC 7 cut(s) 180, 515, 518, 840, 1019, 1626, 1808
ApoI RAATTY 4 cut(s) 27, 817, 1154, 1198
ArsI GACNNNNNNTTYG 2 cut(s) 1152, 1184
AseI ATTAAT 1 cut(s) 1932
AsiGI ACCGGT 1 cut(s) 119
Asp700I GAANNNNTTC 1 cut(s) 1242
AspLEI GCGC 2 cut(s) 1308, 1310
AspS9I GGNCC 2 cut(s) 855, 1865
AsuHPI GGTGA 6 cut(s) 536, 659, 730, 1307, 1394, 1751
AsuNHI GCTAGC 1 cut(s) 1418
AvaII GGWCC 2 cut(s) 855, 1865
BalI TGGCCA 2 cut(s) 216, 1181
BanII GRGCYC 1 cut(s) 1365
BauI CACGAG 2 cut(s) 436, 771
Bbv12I GWGCWC 1 cut(s) 778
BbvI GCAGC 7 cut(s) 192, 505, 527, 852, 1006, 1638, 1795
BccI CCATC 4 cut(s) 257, 679, 1856, 1924
BceAI ACGGC 2 cut(s) 56, 202
BciT130I CCWGG 2 cut(s) 1183, 1226
BclI TGATCA 2 cut(s) 1279, 1492
BcoDI GTCTC 2 cut(s) 652, 1174
BfaI CTAG 3 cut(s) 417, 1175, 1419
BfmI CTRYAG 4 cut(s) 519, 849, 1591, 1809
BfuAI ACCTGC 1 cut(s) 512
BisI GCNGC 7 cut(s) 181, 516, 519, 841, 1020, 1627, 1809
BlpI GCTNAGC 1 cut(s) 1847
BlsI GCNGC 7 cut(s) 182, 517, 520, 842, 1021, 1628, 1810
Bme1390I CCNGG 2 cut(s) 1183, 1226
Bme18I GGWCC 2 cut(s) 855, 1865
BmgT120I GGNCC 2 cut(s) 855, 1865
BmiI GGNNCC 2 cut(s) 856, 1364
BmrFI CCNGG 2 cut(s) 1183, 1226
BmsI GCATC 3 cut(s) 271, 927, 1426
BmtI GCTAGC 1 cut(s) 1422
BpmI CTGGAG 1 cut(s) 503
Bpu1102I GCTNAGC 1 cut(s) 1847
BpuEI CTTGAG 1 cut(s) 425
BsaAI YACGTR 1 cut(s) 567
BsaBI GATNNNNATC 1 cut(s) 1491
BsaI GGTCTC 1 cut(s) 1174
BsaJI CCNNGG 1 cut(s) 1225
BsaWI WCCGGW 5 cut(s) 119, 265, 277, 610, 1546
BsaXI ACNNNNNCTCC 6 cut(s) 140, 170, 614, 644, 992, 1022
Bsc4I CCNNNNNNNGG 1 cut(s) 1686
Bse118I RCCGGY 1 cut(s) 119
Bse3DI GCAATG 1 cut(s) 1350
Bse8I GATNNNNATC 1 cut(s) 1491
BseAI TCCGGA 2 cut(s) 610, 1546
BseBI CCWGG 2 cut(s) 1183, 1226
BseDI CCNNGG 1 cut(s) 1225
BseGI GGATG 8 cut(s) 286, 463, 690, 784, 1330, 1837, 1870, 1916
BseJI GATNNNNATC 1 cut(s) 1491
BseLI CCNNNNNNNGG 1 cut(s) 1686
BseMI GCAATG 1 cut(s) 1350
BseMII CTCAG 3 cut(s) 468, 917, 1155
BsePI GCGCGC 1 cut(s) 1306
BseRI GAGGAG 3 cut(s) 148, 196, 1741
BseXI GCAGC 7 cut(s) 192, 505, 527, 852, 1006, 1638, 1795
BsgI GTGCAG 1 cut(s) 1122
Bsh1236I CGCG 1 cut(s) 1308
BshFI GGCC 2 cut(s) 216, 1181
BshTI ACCGGT 1 cut(s) 119
BsiHKAI GWGCWC 1 cut(s) 778
BsiSI CCGG 5 cut(s) 120, 266, 278, 611, 1547
BslFI GGGAC 3 cut(s) 868, 895, 1247
BslI CCNNNNNNNGG 1 cut(s) 1686
BsmAI GTCTC 2 cut(s) 652, 1174
BsmFI GGGAC 3 cut(s) 868, 895, 1247
BsmI GAATGC 1 cut(s) 606
BsnI GGCC 2 cut(s) 216, 1181
Bso31I GGTCTC 1 cut(s) 1174
Bsp1286I GDGCHC 2 cut(s) 778, 1365
Bsp13I TCCGGA 2 cut(s) 610, 1546
Bsp1407I TGTACA 1 cut(s) 1795
Bsp143I GATC 9 cut(s) 76, 268, 526, 748, 1279, 1408, 1486, 1492, 1965
Bsp1720I GCTNAGC 1 cut(s) 1847
BspACI CCGC 7 cut(s) 105, 391, 633, 794, 983, 1112, 1829
BspANI GGCC 2 cut(s) 216, 1181
BspCNI CTCAG 3 cut(s) 469, 918, 1156
BspEI TCCGGA 2 cut(s) 610, 1546
BspFNI CGCG 1 cut(s) 1308
BspHI TCATGA 1 cut(s) 1375
BspLI GGNNCC 2 cut(s) 856, 1364
BspMAI CTGCAG 3 cut(s) 523, 853, 1813
BspMI ACCTGC 1 cut(s) 512
BspOI GCTAGC 1 cut(s) 1422
BspPI GGATC 2 cut(s) 276, 743
BspQI GCTCTTC 1 cut(s) 830
BspTNI GGTCTC 1 cut(s) 1174
BsrBI CCGCTC 1 cut(s) 393
BsrDI GCAATG 1 cut(s) 1350
BsrFI RCCGGY 1 cut(s) 119
BsrGI TGTACA 1 cut(s) 1795
BssAI RCCGGY 1 cut(s) 119
BssECI CCNNGG 1 cut(s) 1225
BssHII GCGCGC 1 cut(s) 1306
BssMI GATC 9 cut(s) 76, 268, 526, 748, 1279, 1408, 1486, 1492, 1965
BssNAI GTATAC 1 cut(s) 1088
BssSI CACGAG 2 cut(s) 436, 771
Bst1107I GTATAC 1 cut(s) 1088
Bst2BI CACGAG 2 cut(s) 436, 771
Bst2UI CCWGG 2 cut(s) 1183, 1226
Bst4CI ACNGT 4 cut(s) 603, 859, 883, 1406
Bst6I CTCTTC 3 cut(s) 589, 621, 830
BstAUI TGTACA 1 cut(s) 1795
BstBAI YACGTR 1 cut(s) 567
BstC8I GCNNGC 4 cut(s) 1308, 1420, 1775, 1954
BstDEI CTNAG 4 cut(s) 477, 926, 1164, 1847
BstF5I GGATG 8 cut(s) 286, 463, 690, 784, 1330, 1837, 1870, 1916
BstFNI CGCG 1 cut(s) 1308
BstHHI GCGC 2 cut(s) 1308, 1310
BstKTI GATC 9 cut(s) 79, 271, 529, 751, 1282, 1411, 1489, 1495, 1968
BstMAI GTCTC 2 cut(s) 652, 1174
BstMBI GATC 9 cut(s) 76, 268, 526, 748, 1279, 1408, 1486, 1492, 1965
BstMWI GCNNNNNNNGC 4 cut(s) 186, 378, 639, 1783
BstNI CCWGG 2 cut(s) 1183, 1226
BstNSI RCATGY 2 cut(s) 1777, 1781
BstSCI CCNGG 2 cut(s) 1181, 1224
BstSFI CTRYAG 4 cut(s) 519, 849, 1591, 1809
BstSNI TACGTA 1 cut(s) 567
BstUI CGCG 1 cut(s) 1308
BstV1I GCAGC 7 cut(s) 192, 505, 527, 852, 1006, 1638, 1795
BstX2I RGATCY 1 cut(s) 268
BstXI CCANNNNNNTGG 1 cut(s) 1667
BstYI RGATCY 1 cut(s) 268
BstZ17I GTATAC 1 cut(s) 1088
BsuRI GGCC 2 cut(s) 216, 1181
BtsCI GGATG 8 cut(s) 286, 463, 690, 784, 1330, 1837, 1870, 1916
BtsI GCAGTG 1 cut(s) 1858
BtsIMutI CAGTG 3 cut(s) 608, 744, 1858
BveI ACCTGC 1 cut(s) 512
Cac8I GCNNGC 4 cut(s) 1308, 1420, 1775, 1954
CciI TCATGA 1 cut(s) 1375
CfoI GCGC 2 cut(s) 1308, 1310
Cfr10I RCCGGY 1 cut(s) 119
Cfr13I GGNCC 2 cut(s) 855, 1865
Csp6I GTAC 4 cut(s) 53, 377, 599, 1796
CspAI ACCGGT 1 cut(s) 119
CviAII CATG 6 cut(s) 245, 373, 1376, 1444, 1774, 1778
CviQI GTAC 4 cut(s) 53, 377, 599, 1796
DdeI CTNAG 4 cut(s) 477, 926, 1164, 1847
DpnI GATC 9 cut(s) 78, 270, 528, 750, 1281, 1410, 1488, 1494, 1967
DpnII GATC 9 cut(s) 76, 268, 526, 748, 1279, 1408, 1486, 1492, 1965
DrdI GACNNNNNNGTC 1 cut(s) 227
DseDI GACNNNNNNGTC 1 cut(s) 227
EaeI YGGCCR 2 cut(s) 214, 1179
Eam1104I CTCTTC 3 cut(s) 589, 621, 830
EarI CTCTTC 3 cut(s) 589, 621, 830
EciI GGCGGA 2 cut(s) 783, 1844
Eco105I TACGTA 1 cut(s) 567
Eco24I GRGCYC 1 cut(s) 1365
Eco31I GGTCTC 1 cut(s) 1174
Eco32I GATATC 1 cut(s) 1588
Eco47I GGWCC 2 cut(s) 855, 1865
Eco57I CTGAAG 1 cut(s) 650
EcoRI GAATTC 1 cut(s) 1154
EcoRII CCWGG 2 cut(s) 1181, 1224
EcoRV GATATC 1 cut(s) 1588
EcoT22I ATGCAT 1 cut(s) 1779
EcoT38I GRGCYC 1 cut(s) 1365
FaeI CATG 6 cut(s) 248, 376, 1379, 1447, 1777, 1781
FaqI GGGAC 3 cut(s) 868, 895, 1247
FatI CATG 6 cut(s) 244, 372, 1375, 1443, 1773, 1777
FauNDI CATATG 1 cut(s) 356
FbaI TGATCA 2 cut(s) 1279, 1492
FblI GTMKAC 3 cut(s) 234, 262, 1087
Fnu4HI GCNGC 7 cut(s) 181, 516, 519, 841, 1020, 1627, 1809
FokI GGATG 8 cut(s) 293, 470, 697, 771, 1337, 1844, 1857, 1903
FriOI GRGCYC 1 cut(s) 1365
Fsp4HI GCNGC 7 cut(s) 181, 516, 519, 841, 1020, 1627, 1809
FspBI CTAG 3 cut(s) 417, 1175, 1419
GlaI GCGC 2 cut(s) 1307, 1309
GluI GCNGC 7 cut(s) 181, 516, 519, 841, 1020, 1627, 1809
GsuI CTGGAG 1 cut(s) 503
HaeIII GGCC 2 cut(s) 216, 1181
HapII CCGG 5 cut(s) 120, 266, 278, 611, 1547
HhaI GCGC 2 cut(s) 1308, 1310
Hin1II CATG 6 cut(s) 248, 376, 1379, 1447, 1777, 1781
Hin6I GCGC 2 cut(s) 1306, 1308
HinP1I GCGC 2 cut(s) 1306, 1308
HincII GTYRAC 1 cut(s) 235
HindII GTYRAC 1 cut(s) 235
HindIII AAGCTT 2 cut(s) 987, 1731
HinfI GANTC 8 cut(s) 305, 464, 689, 898, 1133, 1243, 1382, 1742
HpaII CCGG 5 cut(s) 120, 266, 278, 611, 1547
HphI GGTGA 6 cut(s) 536, 659, 730, 1307, 1394, 1751
Hpy166II GTNNAC 6 cut(s) 235, 263, 1078, 1088, 1796, 1868
Hpy8I GTNNAC 6 cut(s) 235, 263, 1078, 1088, 1796, 1868
Hpy99I CGWCG 3 cut(s) 149, 236, 457
HpyAV CCTTC 5 cut(s) 337, 901, 1382, 1697, 1964
HpyCH4III ACNGT 4 cut(s) 603, 859, 883, 1406
HpyCH4IV ACGT 2 cut(s) 566, 1975
HpyF10VI GCNNNNNNNGC 4 cut(s) 186, 378, 639, 1783
HpyF3I CTNAG 4 cut(s) 477, 926, 1164, 1847
HpySE526I ACGT 2 cut(s) 566, 1975
Hsp92II CATG 6 cut(s) 248, 376, 1379, 1447, 1777, 1781
HspAI GCGC 2 cut(s) 1306, 1308
Kpn2I TCCGGA 2 cut(s) 610, 1546
Ksp22I TGATCA 2 cut(s) 1279, 1492
Kzo9I GATC 9 cut(s) 76, 268, 526, 748, 1279, 1408, 1486, 1492, 1965
LguI GCTCTTC 1 cut(s) 830
LmnI GCTCC 3 cut(s) 398, 1013, 1368
Lsp1109I GCAGC 7 cut(s) 192, 505, 527, 852, 1006, 1638, 1795
LweI GCATC 3 cut(s) 271, 927, 1426
MaeI CTAG 3 cut(s) 417, 1175, 1419
MaeII ACGT 2 cut(s) 566, 1975
MaeIII GTNAC 5 cut(s) 107, 166, 419, 562, 1834
MalI GATC 9 cut(s) 78, 270, 528, 750, 1281, 1410, 1488, 1494, 1967
MbiI CCGCTC 1 cut(s) 393
MboI GATC 9 cut(s) 76, 268, 526, 748, 1279, 1408, 1486, 1492, 1965
MboII GAAGA 8 cut(s) 521, 606, 638, 847, 968, 980, 1391, 1645
MflI RGATCY 1 cut(s) 268
MhlI GDGCHC 2 cut(s) 778, 1365
MlsI TGGCCA 2 cut(s) 216, 1181
MluNI TGGCCA 2 cut(s) 216, 1181
MlyI GAGTC 1 cut(s) 299
MmeI TCCRAC 4 cut(s) 411, 435, 597, 600
Mox20I TGGCCA 2 cut(s) 216, 1181
Mph1103I ATGCAT 1 cut(s) 1779
MroI TCCGGA 2 cut(s) 610, 1546
MroXI GAANNNNTTC 1 cut(s) 1242
MscI TGGCCA 2 cut(s) 216, 1181
MseI TTAA 7 cut(s) 491, 1116, 1392, 1841, 1908, 1932, 1978
MslI CAYNNNNRTG 1 cut(s) 1961
Msp20I TGGCCA 2 cut(s) 216, 1181
MspA1I CMGCKG 2 cut(s) 105, 518
MspI CCGG 5 cut(s) 120, 266, 278, 611, 1547
MspR9I CCNGG 2 cut(s) 1183, 1226
Mva1269I GAATGC 1 cut(s) 606
MvaI CCWGG 2 cut(s) 1183, 1226
MvnI CGCG 1 cut(s) 1308
MwoI GCNNNNNNNGC 4 cut(s) 186, 378, 639, 1783
NdeI CATATG 1 cut(s) 356
NdeII GATC 9 cut(s) 76, 268, 526, 748, 1279, 1408, 1486, 1492, 1965
NheI GCTAGC 1 cut(s) 1418
NlaIII CATG 6 cut(s) 248, 376, 1379, 1447, 1777, 1781
NlaIV GGNNCC 2 cut(s) 856, 1364
NmeAIII GCCGAG 1 cut(s) 287
NmuCI GTSAC 1 cut(s) 166
NsiI ATGCAT 1 cut(s) 1779
NspI RCATGY 2 cut(s) 1777, 1781
PaeI GCATGC 1 cut(s) 1777
PagI TCATGA 1 cut(s) 1375
PaqCI CACCTGC 1 cut(s) 512
PauI GCGCGC 1 cut(s) 1306
PciSI GCTCTTC 1 cut(s) 830
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PctI GAATGC 1 cut(s) 606
PdmI GAANNNNTTC 1 cut(s) 1242
PfeI GAWTC 7 cut(s) 464, 689, 898, 1133, 1243, 1382, 1742
PinAI ACCGGT 1 cut(s) 119
PkrI GCNGC 7 cut(s) 182, 517, 520, 842, 1021, 1628, 1810
PleI GAGTC 1 cut(s) 299
PpsI GAGTC 1 cut(s) 299
Ppu21I YACGTR 1 cut(s) 567
PshBI ATTAAT 1 cut(s) 1932
Psp6I CCWGG 2 cut(s) 1181, 1224
PspGI CCWGG 2 cut(s) 1181, 1224
PspN4I GGNNCC 2 cut(s) 856, 1364
PspPI GGNCC 2 cut(s) 855, 1865
PstI CTGCAG 3 cut(s) 523, 853, 1813
PsuI RGATCY 1 cut(s) 268
PteI GCGCGC 1 cut(s) 1306
PvuII CAGCTG 1 cut(s) 518
RsaI GTAC 4 cut(s) 54, 378, 600, 1797
RsaNI GTAC 4 cut(s) 53, 377, 599, 1796
RseI CAYNNNNRTG 1 cut(s) 1961
SalI GTCGAC 1 cut(s) 233
SapI GCTCTTC 1 cut(s) 830
SaqAI TTAA 7 cut(s) 491, 1116, 1392, 1841, 1908, 1932, 1978
SatI GCNGC 7 cut(s) 181, 516, 519, 841, 1020, 1627, 1809
Sau3AI GATC 9 cut(s) 76, 268, 526, 748, 1279, 1408, 1486, 1492, 1965
Sau96I GGNCC 2 cut(s) 855, 1865
SchI GAGTC 1 cut(s) 299
ScrFI CCNGG 2 cut(s) 1183, 1226
SduI GDGCHC 2 cut(s) 778, 1365
SfaNI GCATC 3 cut(s) 271, 927, 1426
SfcI CTRYAG 4 cut(s) 519, 849, 1591, 1809
SinI GGWCC 2 cut(s) 855, 1865
SmiMI CAYNNNNRTG 1 cut(s) 1961
SmlI CTYRAG 2 cut(s) 10, 404
SmoI CTYRAG 2 cut(s) 10, 404
SnaBI TACGTA 1 cut(s) 567
SphI GCATGC 1 cut(s) 1777
SsiI CCGC 7 cut(s) 105, 391, 633, 794, 983, 1112, 1829
SspI AATATT 1 cut(s) 1930
SspMI CTAG 3 cut(s) 417, 1175, 1419
StyD4I CCNGG 2 cut(s) 1181, 1224
TaaI ACNGT 4 cut(s) 603, 859, 883, 1406
TaiI ACGT 2 cut(s) 569, 1978
TaqI TCGA 7 cut(s) 144, 234, 431, 462, 999, 1127, 1968
TatI WGTACW 2 cut(s) 598, 1795
TfiI GAWTC 7 cut(s) 464, 689, 898, 1133, 1243, 1382, 1742
Tru1I TTAA 7 cut(s) 491, 1116, 1392, 1841, 1908, 1932, 1978
Tru9I TTAA 7 cut(s) 491, 1116, 1392, 1841, 1908, 1932, 1978
TscAI CASTG 3 cut(s) 608, 751, 1858
TseFI GTSAC 1 cut(s) 166
TseI GCWGC 7 cut(s) 180, 515, 518, 840, 1019, 1626, 1808
Tsp45I GTSAC 1 cut(s) 166
TspGWI ACGGA 4 cut(s) 286, 563, 1284, 1894
TspRI CASTG 3 cut(s) 608, 751, 1858
VpaK11BI GGWCC 2 cut(s) 855, 1865
VspI ATTAAT 1 cut(s) 1932
XapI RAATTY 4 cut(s) 27, 817, 1154, 1198
XceI RCATGY 2 cut(s) 1777, 1781
XcmI CCANNNNNNNNNTGG 1 cut(s) 1519
XmiI GTMKAC 3 cut(s) 234, 262, 1087
XmnI GAANNNNTTC 1 cut(s) 1242
XspI CTAG 3 cut(s) 417, 1175, 1419
Zsp2I ATGCAT 1 cut(s) 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.