Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0003539

Physical Location & Seq

Genomic Coordinates Forward (+)

7950416 .. 7962212

Gene Structure 11797 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG046700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGTTTGATTGGAACGACCAGGAGCTTGCAAATATAATATGGGGTGAGGGATGCGAGAGTGATGACCATATTGTGCCTTATCCCGAGGCAACTGATGATTACCGAGACAAGAAGGAACGTAACCAAGAATCTGATACCATCAAGTCTACTGAGCAGAAGGCACCTGGAGCCAAAGTTGATTTGCATGGTAGAAAGCCGGAAAGCAGTTCCAACTTCGAGACTGGTGAAGGAATTTCTACTTCTGGATTCGAAACAGACTCATGGCCTGACTTATCCTTATCTAGTTTTGAGAAAACTGAACAACAATGCATGGGTACGGAAACCCCCAACAACTTAACTGATAATAATAATTTAGCTGAGGCAAATCAACTTGACAAAGCTGCTGAACTTTTTCAAAATTCCAATGAAGCTAAAGAACAATTTGTTGACTATGGGTGGGCTAATATAGGAAGTTTTGATGATCTTGATCAAATTTTCAGCAATGATGACACTATATTTAGCCAAGTAAGTCTTGGAAATGTGGATGAGCTGTGGTCTTCTAAAGATGCGACTAATAGTCCAATCAAAGCATTTCCTGTGACTTCAGACTCACCAAGTTCCGGGTCAGGAGCACTGAGGAATGTGTCAGAGCATGCGGAAATTAAAACAGAAATTGTGCAGCAAGATGAGCGGGCAATTTCCCCTGGCTATGGGAAGACAGATTTTTCTGCATCTCATGGTCTACAGAATGCCCCTGCAACTCTTGATCATGTAGAATATGCTGTGGGAAAAAGTAAGCCCACAGAAAAGGAGCAGACAGGGTTGGACTTGGGCAACAGCACTGTAACAAATTCTTACCAGGCTGCTGTAAATTCTTCTTCGTCAACTGAAATTCCTGACAAGGTTTCCAGGCAGAGAAAATTTTTGAGGTCTCGTAAAAAGTTGGAGGACAAAAATGAGGGGAAATCATTGCAAGATTTTTATGGTAACTGGTCTTCAACAAGAAACCCTTCTGGACAATTTGATAACCAGTTGCCAAGCCTTATAGTTCAATCTTCTCCCACTTCAGTTCTTGGTCACAAGAGACAGCTTCAAGGACCTGAGTCTTTTCCATACCAGCCTGTGTCTAATCAATTTGTGTCTCAGACTATGTATGGGACTCTCACTAATGCATGCCAGGCTACACCGGTGCTTTCTCACACTCAGCCTGGGCAGATTAAGCATCAAAATTTTCTTTCTGGTTCAGACATGTCTCCGGGTAGTGCTAGAAACAAGTCAGCAGATACTTGTGCCAAGCCTCTAACTATGACTACTCAGGAAAAAATTGAAAAGTTAAGAAGGCGGCAACAACTGCAGGCAATGCTTGCTATTAGAAAACAACAGCAACAATTTAGCCATCAAGTCTCATGCACCAATCAGCCTACCACACAAAAGTGTCCCCAAGAAAATCAAATTCAGCACTCTGAGAGAGCTGATCTGGAAGTTGAAGATTTAAGCACTTTTCCTTCTCTGGACCCAAATTCACCCATAGAACAAGATGATTCAAATACAGTTTCTGCAGCAGTTGAATATTACTCAGCGGAGGACACAATACTCTACAGGCTTCAAGATATTATAGCAAAGTTGGACATCAAAACGAGACTTTGCATACGGGATAGCTTGTTGCGGTTATCTCAAAGTGCAGTGCAAAGGCATCATACAAGTGATACTAACAGTTCCAACAGAAACAGCAAGGATGAGCCTGAAATTGTTGCAAAGGAGGAAATCGGCGGTTGTAACAGGTTTATAAGCTATCCCAGTTCTTGTATATATGCTTTATTTTCATTGGAGCGGAGGTGGTTATCCCTTCTATGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

611

Amino Acids

68.04

Weight (kDa)

4.93

Isoelectric Point (pI)

52.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003539)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54500 AT3G54500 AT3G54500 AT3G54500 AT3G54500 AT3G54500 AT3G54500 AT3G54500
fragaria_vesca	FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700
malus_domestica	MD02G1290900.v1.1 MD07G1036600.v1.1
prunus_persica	Prupe.2G032000_v2.0.a1 Prupe.2G032000_v2.0.a1 Prupe.2G032000_v2.0.a1 Prupe.2G032000_v2.0.a1
pyrus_communis	pycom02g24590 pycom07g02520 pycom11g13590
rosa_chinensis	RchiOBHm_Chr1g0321761
rosa_laevigata	RLG00000030406
rosa_multiflora	Rmu_sc0003410.1_g000034 Rmu_sc0003909.1_g000003
rosa_rugosa	Rorug01G0034100
rosa_samantha	Rh1AG046700 Rh1BG045200 Rh1CG050800 Rh1DG055100
rosa_wichuraiana	Rw1G004190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1766
AccB1I	GGYRCC	1 cut(s)	160
AccBSI	CCGCTC	2 cut(s)	670, 1810
AccI	GTMKAC	2 cut(s)	146, 721
AciI	CCGC	7 cut(s)	635, 670, 1321, 1559, 1645, 1749, 1810
AcuI	CTGAAG	2 cut(s)	567, 1029
AfaI	GTAC	1 cut(s)	316
AfiI	CCNNNNNNNGG	2 cut(s)	599, 689
AflIII	ACRYGT	1 cut(s)	1227
AgeI	ACCGGT	1 cut(s)	1165
AgsI	TTSAA	9 cut(s)	395, 978, 1031, 1073, 1307, 1466, 1524, 1547, 1586
AhdI	GACNNNNNGTC	1 cut(s)	555
AjnI	CCWGG	7 cut(s)	18, 163, 682, 837, 887, 1155, 1186
AleI	CACNNNNGTG	1 cut(s)	1411
AluBI	AGCT	9 cut(s)	25, 356, 380, 410, 529, 1069, 1451, 1638, 1770
AluI	AGCT	9 cut(s)	25, 356, 380, 410, 529, 1069, 1451, 1638, 1770
Alw21I	GWGCWC	1 cut(s)	613
Alw26I	GTCTC	8 cut(s)	99, 212, 915, 1057, 1125, 1236, 1387, 1612
AlwNI	CAGNNNCTG	1 cut(s)	1535
Ama87I	CYCGRG	1 cut(s)	83
AoxI	GGCC	1 cut(s)	263
ApeKI	GCWGC	4 cut(s)	380, 658, 842, 1538
AsiGI	ACCGGT	1 cut(s)	1165
Asp700I	GAANNNNTTC	2 cut(s)	390, 988
AspS9I	GGNCC	2 cut(s)	1076, 1492
AsuC2I	CCSGG	2 cut(s)	601, 1236
AsuHPI	GGTGA	4 cut(s)	56, 236, 582, 1494
AsuII	TTCGAA	1 cut(s)	249
AvaI	CYCGRG	1 cut(s)	83
AvaII	GGWCC	2 cut(s)	1076, 1492
BanI	GGYRCC	1 cut(s)	160
BarI	GAAGNNNNNNTAC	2 cut(s)	958, 990
BbsI	GAAGAC	3 cut(s)	528, 701, 966
Bbv12I	GWGCWC	1 cut(s)	613
BbvCI	CCTCAGC	1 cut(s)	357
BbvI	GCAGC	4 cut(s)	367, 670, 829, 1550
BccI	CCATC	2 cut(s)	146, 1383
BciT130I	CCWGG	7 cut(s)	20, 165, 684, 839, 889, 1157, 1188
BclI	TGATCA	2 cut(s)	466, 745
BcnI	CCSGG	2 cut(s)	601, 1236
BcoDI	GTCTC	8 cut(s)	99, 212, 915, 1057, 1125, 1236, 1387, 1612
BfaI	CTAG	2 cut(s)	282, 1245
BfmI	CTRYAG	4 cut(s)	722, 1331, 1536, 1576
BisI	GCNGC	5 cut(s)	381, 659, 843, 1322, 1539
BlsI	GCNGC	5 cut(s)	382, 660, 844, 1323, 1540
Bme1390I	CCNGG	9 cut(s)	20, 165, 601, 684, 839, 889, 1157, 1188, 1236
Bme18I	GGWCC	2 cut(s)	1076, 1492
BmeRI	GACNNNNNGTC	1 cut(s)	555
BmeT110I	CYCGRG	1 cut(s)	83
BmgT120I	GGNCC	2 cut(s)	1076, 1492
BmiI	GGNNCC	3 cut(s)	162, 169, 1494
BmrFI	CCNGG	9 cut(s)	20, 165, 601, 684, 839, 889, 1157, 1188, 1236
BmrI	ACTGGG	1 cut(s)	1770
BmsI	GCATC	5 cut(s)	41, 535, 719, 1210, 1681
BmuI	ACTGGG	1 cut(s)	1770
BoxI	GACNNNNGTC	1 cut(s)	1081
BpiI	GAAGAC	3 cut(s)	528, 701, 966
BpmI	CTGGAG	1 cut(s)	186
Bpu10I	CCTNAGC	1 cut(s)	357
Bpu14I	TTCGAA	1 cut(s)	249
BpuMI	CCSGG	2 cut(s)	601, 1236
BsaBI	GATNNNNATC	1 cut(s)	465
BsaI	GGTCTC	1 cut(s)	915
BsaJI	CCNNGG	3 cut(s)	84, 682, 1187
BsaWI	WCCGGW	1 cut(s)	1165
BsaXI	ACNNNNNCTCC	4 cut(s)	159, 189, 1799, 1829
Bsc4I	CCNNNNNNNGG	2 cut(s)	599, 689
Bse118I	RCCGGY	1 cut(s)	1165
Bse1I	ACTGG	4 cut(s)	226, 974, 1009, 1776
Bse3DI	GCAATG	3 cut(s)	487, 947, 1344
Bse8I	GATNNNNATC	1 cut(s)	465
BseBI	CCWGG	7 cut(s)	20, 165, 684, 839, 889, 1157, 1188
BseDI	CCNNGG	3 cut(s)	84, 682, 1187
BseGI	GGATG	3 cut(s)	56, 529, 1720
BseJI	GATNNNNATC	1 cut(s)	465
BseLI	CCNNNNNNNGG	2 cut(s)	599, 689
BseMI	GCAATG	3 cut(s)	487, 947, 1344
BseMII	CTCAG	9 cut(s)	141, 348, 605, 1071, 1136, 1196, 1307, 1434, 1569
BseNI	ACTGG	4 cut(s)	226, 974, 1009, 1776
BseXI	GCAGC	4 cut(s)	367, 670, 829, 1550
BsgI	GTGCAG	2 cut(s)	677, 1680
BshFI	GGCC	1 cut(s)	265
BshNI	GGYRCC	1 cut(s)	160
BshTI	ACCGGT	1 cut(s)	1165
BsiHKAI	GWGCWC	1 cut(s)	613
BsiHKCI	CYCGRG	1 cut(s)	83
BsiSI	CCGG	4 cut(s)	197, 600, 1166, 1235
BslFI	GGGAC	2 cut(s)	1150, 1401
BslI	CCNNNNNNNGG	2 cut(s)	599, 689
BsmAI	GTCTC	8 cut(s)	99, 212, 915, 1057, 1125, 1236, 1387, 1612
BsmFI	GGGAC	2 cut(s)	1150, 1401
BsmI	GAATGC	1 cut(s)	733
BsnI	GGCC	1 cut(s)	265
Bso31I	GGTCTC	1 cut(s)	915
BsoBI	CYCGRG	1 cut(s)	83
Bsp119I	TTCGAA	1 cut(s)	249
Bsp1286I	GDGCHC	1 cut(s)	613
Bsp143I	GATC	4 cut(s)	460, 466, 745, 1453
BspACI	CCGC	7 cut(s)	635, 670, 1321, 1559, 1645, 1749, 1810
BspANI	GGCC	1 cut(s)	265
BspCNI	CTCAG	9 cut(s)	142, 349, 606, 1072, 1135, 1195, 1306, 1435, 1568
BspLI	GGNNCC	3 cut(s)	162, 169, 1494
BspMAI	CTGCAG	2 cut(s)	1335, 1540
BspT104I	TTCGAA	1 cut(s)	249
BspT107I	GGYRCC	1 cut(s)	160
BspTNI	GGTCTC	1 cut(s)	915
BsrBI	CCGCTC	2 cut(s)	670, 1810
BsrDI	GCAATG	3 cut(s)	487, 947, 1344
BsrFI	RCCGGY	1 cut(s)	1165
BsrI	ACTGG	4 cut(s)	226, 974, 1009, 1776
BssAI	RCCGGY	1 cut(s)	1165
BssECI	CCNNGG	3 cut(s)	84, 682, 1187
BssMI	GATC	4 cut(s)	460, 466, 745, 1453
Bst2UI	CCWGG	7 cut(s)	20, 165, 684, 839, 889, 1157, 1188
Bst4CI	ACNGT	3 cut(s)	823, 1531, 1694
BstAPI	GCANNNNNTGC	3 cut(s)	1330, 1339, 1343
BstBI	TTCGAA	1 cut(s)	249
BstC8I	GCNNGC	6 cut(s)	27, 633, 672, 1153, 1335, 1344
BstDEI	CTNAG	9 cut(s)	150, 357, 614, 1080, 1122, 1182, 1293, 1443, 1555
BstF5I	GGATG	3 cut(s)	56, 529, 1720
BstKTI	GATC	4 cut(s)	463, 469, 748, 1456
BstMAI	GTCTC	8 cut(s)	99, 212, 915, 1057, 1125, 1236, 1387, 1612
BstMBI	GATC	4 cut(s)	460, 466, 745, 1453
BstMWI	GCNNNNNNNGC	7 cut(s)	167, 667, 1157, 1198, 1330, 1339, 1343
BstNI	CCWGG	7 cut(s)	20, 165, 684, 839, 889, 1157, 1188
BstNSI	RCATGY	3 cut(s)	635, 1155, 1231
BstPAI	GACNNNNGTC	1 cut(s)	1081
BstSCI	CCNGG	9 cut(s)	18, 163, 599, 682, 837, 887, 1155, 1186, 1234
BstSFI	CTRYAG	4 cut(s)	722, 1331, 1536, 1576
BstV1I	GCAGC	4 cut(s)	367, 670, 829, 1550
BstV2I	GAAGAC	3 cut(s)	528, 701, 966
BsuRI	GGCC	1 cut(s)	265
BtsCI	GGATG	3 cut(s)	56, 529, 1720
BtsI	GCAGTG	1 cut(s)	1668
BtsIMutI	CAGTG	3 cut(s)	611, 819, 1668
Cac8I	GCNNGC	6 cut(s)	27, 633, 672, 1153, 1335, 1344
CaiI	CAGNNNCTG	1 cut(s)	1535
Cfr10I	RCCGGY	1 cut(s)	1165
Cfr13I	GGNCC	2 cut(s)	1076, 1492
Csp6I	GTAC	1 cut(s)	315
CspAI	ACCGGT	1 cut(s)	1165
CviAII	CATG	9 cut(s)	185, 261, 310, 632, 716, 749, 1152, 1228, 1386
CviQI	GTAC	1 cut(s)	315
DdeI	CTNAG	9 cut(s)	150, 357, 614, 1080, 1122, 1182, 1293, 1443, 1555
DpnI	GATC	4 cut(s)	462, 468, 747, 1455
DpnII	GATC	4 cut(s)	460, 466, 745, 1453
DriI	GACNNNNNGTC	1 cut(s)	555
Eam1105I	GACNNNNNGTC	1 cut(s)	555
Eco31I	GGTCTC	1 cut(s)	915
Eco47I	GGWCC	2 cut(s)	1076, 1492
Eco57I	CTGAAG	2 cut(s)	567, 1029
Eco88I	CYCGRG	1 cut(s)	83
EcoO109I	RGGNCCY	1 cut(s)	1076
EcoRII	CCWGG	7 cut(s)	18, 163, 682, 837, 887, 1155, 1186
EcoT22I	ATGCAT	2 cut(s)	311, 1153
FaeI	CATG	9 cut(s)	188, 264, 313, 635, 719, 752, 1155, 1231, 1389
FalI	AAGNNNNNCTT	4 cut(s)	495, 527, 973, 1005
FaqI	GGGAC	2 cut(s)	1150, 1401
FatI	CATG	9 cut(s)	184, 260, 309, 631, 715, 748, 1151, 1227, 1385
FauI	CCCGC	1 cut(s)	663
FbaI	TGATCA	2 cut(s)	466, 745
FblI	GTMKAC	2 cut(s)	146, 721
Fnu4HI	GCNGC	5 cut(s)	381, 659, 843, 1322, 1539
FokI	GGATG	3 cut(s)	63, 536, 1727
Fsp4HI	GCNGC	5 cut(s)	381, 659, 843, 1322, 1539
FspBI	CTAG	2 cut(s)	282, 1245
GluI	GCNGC	5 cut(s)	381, 659, 843, 1322, 1539
GsuI	CTGGAG	1 cut(s)	186
HaeIII	GGCC	1 cut(s)	265
HapII	CCGG	4 cut(s)	197, 600, 1166, 1235
Hin1II	CATG	9 cut(s)	188, 264, 313, 635, 719, 752, 1155, 1231, 1389
HincII	GTYRAC	2 cut(s)	427, 864
HindII	GTYRAC	2 cut(s)	427, 864
HinfI	GANTC	7 cut(s)	128, 246, 257, 587, 1082, 1138, 1520
HpaII	CCGG	4 cut(s)	197, 600, 1166, 1235
HphI	GGTGA	4 cut(s)	56, 236, 582, 1494
Hpy166II	GTNNAC	4 cut(s)	147, 427, 722, 864
Hpy188I	TCNGA	6 cut(s)	133, 586, 628, 1125, 1225, 1444
Hpy8I	GTNNAC	4 cut(s)	147, 427, 722, 864
HpyAV	CCTTC	7 cut(s)	106, 151, 221, 999, 1311, 1494, 1835
HpyCH4III	ACNGT	3 cut(s)	823, 1531, 1694
HpyCH4IV	ACGT	1 cut(s)	118
HpyF10VI	GCNNNNNNNGC	7 cut(s)	167, 667, 1157, 1198, 1330, 1339, 1343
HpyF3I	CTNAG	9 cut(s)	150, 357, 614, 1080, 1122, 1182, 1293, 1443, 1555
HpySE526I	ACGT	1 cut(s)	118
Hsp92II	CATG	9 cut(s)	188, 264, 313, 635, 719, 752, 1155, 1231, 1389
Ksp22I	TGATCA	2 cut(s)	466, 745
Kzo9I	GATC	4 cut(s)	460, 466, 745, 1453
LmnI	GCTCC	5 cut(s)	22, 167, 608, 790, 1807
Lsp1109I	GCAGC	4 cut(s)	367, 670, 829, 1550
LweI	GCATC	5 cut(s)	41, 535, 719, 1210, 1681
MaeI	CTAG	2 cut(s)	282, 1245
MaeII	ACGT	1 cut(s)	118
MaeIII	GTNAC	6 cut(s)	119, 577, 823, 965, 1055, 1754
MalI	GATC	4 cut(s)	462, 468, 747, 1455
MbiI	CCGCTC	2 cut(s)	670, 1810
MboI	GATC	4 cut(s)	460, 466, 745, 1453
MboII	GAAGA	7 cut(s)	528, 706, 846, 849, 966, 1026, 1478
MhlI	GDGCHC	1 cut(s)	613
MlyI	GAGTC	4 cut(s)	251, 581, 1091, 1132
MmeI	TCCRAC	5 cut(s)	234, 783, 903, 1584, 1722
Mph1103I	ATGCAT	2 cut(s)	311, 1153
MroXI	GAANNNNTTC	2 cut(s)	390, 988
MseI	TTAA	5 cut(s)	335, 642, 1197, 1313, 1472
MslI	CAYNNNNRTG	2 cut(s)	1411, 1680
MspA1I	CMGCKG	1 cut(s)	1559
MspI	CCGG	4 cut(s)	197, 600, 1166, 1235
MspR9I	CCNGG	9 cut(s)	20, 165, 601, 684, 839, 889, 1157, 1188, 1236
Mva1269I	GAATGC	1 cut(s)	733
MvaI	CCWGG	7 cut(s)	20, 165, 684, 839, 889, 1157, 1188
MwoI	GCNNNNNNNGC	7 cut(s)	167, 667, 1157, 1198, 1330, 1339, 1343
NciI	CCSGG	2 cut(s)	601, 1236
NdeII	GATC	4 cut(s)	460, 466, 745, 1453
NlaIII	CATG	9 cut(s)	188, 264, 313, 635, 719, 752, 1155, 1231, 1389
NlaIV	GGNNCC	3 cut(s)	162, 169, 1494
NmuCI	GTSAC	2 cut(s)	577, 1055
NsiI	ATGCAT	2 cut(s)	311, 1153
NspI	RCATGY	3 cut(s)	635, 1155, 1231
NspV	TTCGAA	1 cut(s)	249
OliI	CACNNNNGTG	1 cut(s)	1411
PaeI	GCATGC	2 cut(s)	635, 1155
PciI	ACATGT	1 cut(s)	1227
PctI	GAATGC	1 cut(s)	733
PdmI	GAANNNNTTC	2 cut(s)	390, 988
PfeI	GAWTC	3 cut(s)	128, 246, 1520
PinAI	ACCGGT	1 cut(s)	1165
PkrI	GCNGC	5 cut(s)	382, 660, 844, 1323, 1540
PleI	GAGTC	4 cut(s)	251, 581, 1090, 1132
PpsI	GAGTC	4 cut(s)	251, 581, 1090, 1132
PpuMI	RGGWCCY	1 cut(s)	1076
PscI	ACATGT	1 cut(s)	1227
PshAI	GACNNNNGTC	1 cut(s)	1081
PsiI	TTATAA	1 cut(s)	1766
Psp5II	RGGWCCY	1 cut(s)	1076
Psp6I	CCWGG	7 cut(s)	18, 163, 682, 837, 887, 1155, 1186
PspGI	CCWGG	7 cut(s)	18, 163, 682, 837, 887, 1155, 1186
PspN4I	GGNNCC	3 cut(s)	162, 169, 1494
PspPI	GGNCC	2 cut(s)	1076, 1492
PspPPI	RGGWCCY	1 cut(s)	1076
PstI	CTGCAG	2 cut(s)	1335, 1540
PstNI	CAGNNNCTG	1 cut(s)	1535
RsaI	GTAC	1 cut(s)	316
RsaNI	GTAC	1 cut(s)	315
RseI	CAYNNNNRTG	2 cut(s)	1411, 1680
SaqAI	TTAA	5 cut(s)	335, 642, 1197, 1313, 1472
SatI	GCNGC	5 cut(s)	381, 659, 843, 1322, 1539
Sau3AI	GATC	4 cut(s)	460, 466, 745, 1453
Sau96I	GGNCC	2 cut(s)	1076, 1492
SchI	GAGTC	4 cut(s)	251, 581, 1091, 1132
ScrFI	CCNGG	9 cut(s)	20, 165, 601, 684, 839, 889, 1157, 1188, 1236
SduI	GDGCHC	1 cut(s)	613
SfaNI	GCATC	5 cut(s)	41, 535, 719, 1210, 1681
SfcI	CTRYAG	4 cut(s)	722, 1331, 1536, 1576
SfuI	TTCGAA	1 cut(s)	249
SgrAI	CRCCGGYG	1 cut(s)	1165
SinI	GGWCC	2 cut(s)	1076, 1492
SmiMI	CAYNNNNRTG	2 cut(s)	1411, 1680
SphI	GCATGC	2 cut(s)	635, 1155
SsiI	CCGC	7 cut(s)	635, 670, 1321, 1559, 1645, 1749, 1810
SspI	AATATT	1 cut(s)	1550
SspMI	CTAG	2 cut(s)	282, 1245
StyD4I	CCNGG	9 cut(s)	18, 163, 599, 682, 837, 887, 1155, 1186, 1234
TaaI	ACNGT	3 cut(s)	823, 1531, 1694
TaiI	ACGT	1 cut(s)	121
TaqI	TCGA	2 cut(s)	216, 249
TauI	GCSGC	1 cut(s)	1324
TfiI	GAWTC	3 cut(s)	128, 246, 1520
Tru1I	TTAA	5 cut(s)	335, 642, 1197, 1313, 1472
Tru9I	TTAA	5 cut(s)	335, 642, 1197, 1313, 1472
TscAI	CASTG	3 cut(s)	618, 826, 1668
TseFI	GTSAC	2 cut(s)	577, 1055
TseI	GCWGC	4 cut(s)	380, 658, 842, 1538
Tsp45I	GTSAC	2 cut(s)	577, 1055
TspDTI	ATGAA	2 cut(s)	420, 1791
TspGWI	ACGGA	1 cut(s)	332
TspRI	CASTG	3 cut(s)	618, 826, 1668
VpaK11BI	GGWCC	2 cut(s)	1076, 1492
XceI	RCATGY	3 cut(s)	635, 1155, 1231
XcmI	CCANNNNNNNNNTGG	1 cut(s)	509
XmiI	GTMKAC	2 cut(s)	146, 721
XmnI	GAANNNNTTC	2 cut(s)	390, 988
XspI	CTAG	2 cut(s)	282, 1245
Zsp2I	ATGCAT	2 cut(s)	311, 1153

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.