Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0003539

Physical Location & Seq

Genomic Coordinates Forward (+)

5995826 .. 6005541

Gene Structure 9716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG045200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGTTTGATTGGAACGACCAGGAGCTTGCTAATATAATATGGGGCGAGGGATGTGAGAGTGATGACCATATTGTGCCTTATCCCGAGGCAACTGATGATTACCGAGACAAGAAGGAACGTAACCAAGAATCTGATACCATCAAGTCTACTGAGCAGAAGGCACCTGGAGCCAAAGTTGATTTGCATGGTAGAAAGCCGGAAAGCAGTTCCAACTTCGAGACTGGTGAAGGAATTTCTAGTTCTAGATTCGAAACAGACTCATGGCCTGACTTATCCTTATCTAGTTTTGAGAAAACTGAACAACAATGCATGGCTGAGGCAAATCAACTTGACAAAGCTGCTGAACTTTTTCAAAATTCCAATGAAGCTAAAGAACAATTTGTTGACTATGGGTGGGCTAATATAGGAAGTTTTGATGATCTTGATCAAATTTTCAGCAATGATGACACTATATTTAGCCAAGTAAGTCTTGGAAATGTGGATGAGCTGTGGTCTTCTAAAGATGCGACTGATAGTCCAATCAAAGCATTTCCTGTGACTTCAGACTCACCAAGTTCCGGGTCAGGAGCACTGAGGAATGTGTCAGAGCATGCGGAAATTAAAACAGAAATTGTGCAGCAAGATGAGCGGGCAATTTCCCCTGGCTATGGGAAGACAGATTTTTCTGCATCTCATGGTCTACAGAATGCCCCTGCAACTCTTGATCATGTAGAATATGCTGTGGGAAAAAGTAAGCCCACAGAAAAGGAGCAGACAGGGTCGGACTTGGGCAACAGCACTGTAACAAATTCTTACCAGGCTGCTGTAAATTCTTCTTCGTCAACTGAAATTCCTGACAAGGTTTCCAGGCAGAGAAAATTTTTGAGGTCTCGTAAAAAGTTGGAGGACAAAAATGAAGGGAAATCATTGCAAGATTTTTATGGTAGCTGGTCTTCAACAAGAAACCCTTCCGGACAATTTGATAACCAGTTGCCAAGCCTTATGGTTCAATCTTCTCCCACTTCAGTTCTTGGTCACAAGAGACAGCTTCAAGGACCTGAGTCTTTTCCATACCAGCCTGTGTCTAATCAATTTGTGTCTCAGACTATGTATGGGACTCTCACTAATGCATGCCAGGCTACACCGGTGCTTTCTCACACTCAGCCTGGGCAGATTAAACATCAAAATTTTCTTTCTGGTTCAGACATTTCTCCGGGTAGTGCTAGAAACAAGTCAGCAGATACTTGTGCCAAGCCAACTATGACTACTCAGGAAAAAATTGAAAAGTTAAGAAGGCGGCAGCAACTGCAGGCAATGCTTGCTATTAGAAAACAACAGCAACAATTTAGCCATCAAGTCTCATGCACCAATCAGCCTACCACACAAAAGTGTCCCCAAGAAAATCAAATTCAGCACTCTGAGAGAGCTGATCTGGAAGTTGAAGATTTAAGCACTTTTCCTTCTCTGGACCCAAATTCACCCATAGAACAAGATGATTCAAATACAGTTTCTGCAGCAGTTGAATATTACTCAGCGGAGGACACAATACTCTACAGGCTTCAAGATATTATAGCAAAGTTGGACATCAAAACGAGACTTTGCATACGGGATAGCTTGTTGCGGTTAGCTCAAAGTGCAGTGCAAAGGCATCATTCAAGTGATACTAGCAGTTCCAACAGAAACAGCAAGGATGAGCCTGAAATTGTAGCAAAGGAGGAAATCGGCGGTTGTAACAGGTACACCAGCATGCCAGATGTTGAGACCGAGACCAATCCTATAGACCGAACTGTGGCTCATTTGCTCTTTCATCGCCCGTTGGATCTATCAGGAAAACATTCTGGTGCACCAGAATCACCTGCTTCTACTAAGATGCCATTTGAACGCAAAACAGCAGGCTTAGCTAGCTTGTCAAACGGAGTATTGCTCGACAGTTTGAAGAACAAATCAAACTATTCTCATCAAGAATCTGGAAATTATTGCCCAGATCCTGAGCCCCAGTCTGCGGATCAGAACTTGCCTTGCATGAACAAGTCAGAAAACCTATCGAACAATGGGTCAGCAGATGGTGGAACCATGGAGGTCGAAGCCTCTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

691

Amino Acids

76.31

Weight (kDa)

4.94

Isoelectric Point (pI)

52.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003539)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54500 AT3G54500 AT3G54500 AT3G54500 AT3G54500 AT3G54500 AT3G54500 AT3G54500
fragaria_vesca	FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700 FvH4_7g02700
malus_domestica	MD02G1290900.v1.1 MD07G1036600.v1.1
prunus_persica	Prupe.2G032000_v2.0.a1 Prupe.2G032000_v2.0.a1 Prupe.2G032000_v2.0.a1 Prupe.2G032000_v2.0.a1
pyrus_communis	pycom02g24590 pycom07g02520 pycom11g13590
rosa_chinensis	RchiOBHm_Chr1g0321761
rosa_laevigata	RLG00000030406
rosa_multiflora	Rmu_sc0003410.1_g000034 Rmu_sc0003909.1_g000003
rosa_rugosa	Rorug01G0034100
rosa_samantha	Rh1AG046700 Rh1BG045200 Rh1CG050800 Rh1DG055100
rosa_wichuraiana	Rw1G004190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1843
Acc36I	ACCTGC	1 cut(s)	1843
AccB1I	GGYRCC	1 cut(s)	160
AccBSI	CCGCTC	1 cut(s)	628
AccI	GTMKAC	2 cut(s)	146, 679
AccIII	TCCGGA	1 cut(s)	950
AciI	CCGC	7 cut(s)	593, 628, 1276, 1514, 1600, 1704, 1982
AclWI	GGATC	3 cut(s)	1806, 1958, 1992
AcuI	CTGAAG	2 cut(s)	525, 987
AfaI	GTAC	1 cut(s)	1718
AfiI	CCNNNNNNNGG	4 cut(s)	557, 647, 1768, 1981
AgeI	ACCGGT	1 cut(s)	1123
AhdI	GACNNNNNGTC	1 cut(s)	513
AjnI	CCWGG	7 cut(s)	18, 163, 640, 795, 845, 1113, 1144
AleI	CACNNNNGTG	1 cut(s)	1366
Alw21I	GWGCWC	2 cut(s)	571, 1825
Alw26I	GTCTC	9 cut(s)	99, 212, 873, 1015, 1083, 1342, 1567, 1733, 1739
Alw44I	GTGCAC	1 cut(s)	1821
AlwI	GGATC	3 cut(s)	1806, 1958, 1992
AlwNI	CAGNNNCTG	3 cut(s)	1285, 1490, 1967
Ama87I	CYCGRG	1 cut(s)	83
Aor13HI	TCCGGA	1 cut(s)	950
AoxI	GGCC	1 cut(s)	263
ApaLI	GTGCAC	1 cut(s)	1821
ApeKI	GCWGC	5 cut(s)	338, 616, 800, 1279, 1493
ArsI	GACNNNNNNTTYG	2 cut(s)	2018, 2050
AsiGI	ACCGGT	1 cut(s)	1123
Asp700I	GAANNNNTTC	3 cut(s)	348, 946, 1813
AspS9I	GGNCC	2 cut(s)	1034, 1447
AsuC2I	CCSGG	2 cut(s)	559, 1194
AsuHPI	GGTGA	4 cut(s)	236, 540, 1449, 1824
AsuII	TTCGAA	1 cut(s)	249
AsuNHI	GCTAGC	1 cut(s)	1880
AvaI	CYCGRG	1 cut(s)	83
AvaII	GGWCC	2 cut(s)	1034, 1447
BaeGI	GKGCMC	1 cut(s)	1825
BanI	GGYRCC	1 cut(s)	160
BanII	GRGCYC	1 cut(s)	1974
BarI	GAAGNNNNNNTAC	2 cut(s)	916, 948
BbsI	GAAGAC	3 cut(s)	486, 659, 924
Bbv12I	GWGCWC	2 cut(s)	571, 1825
BbvCI	CCTCAGC	1 cut(s)	315
BbvI	GCAGC	5 cut(s)	325, 628, 787, 1291, 1505
BccI	CCATC	3 cut(s)	146, 1338, 2036
BciT130I	CCWGG	7 cut(s)	20, 165, 642, 797, 847, 1115, 1146
BclI	TGATCA	2 cut(s)	424, 703
BcnI	CCSGG	2 cut(s)	559, 1194
BcoDI	GTCTC	9 cut(s)	99, 212, 873, 1015, 1083, 1342, 1567, 1733, 1739
BfaI	CTAG	6 cut(s)	237, 243, 282, 1203, 1644, 1881
BfmI	CTRYAG	5 cut(s)	680, 1286, 1491, 1531, 1755
BfuAI	ACCTGC	1 cut(s)	1843
BisI	GCNGC	6 cut(s)	339, 617, 801, 1277, 1280, 1494
BlpI	GCTNAGC	1 cut(s)	1876
BlsI	GCNGC	6 cut(s)	340, 618, 802, 1278, 1281, 1495
Bme1390I	CCNGG	9 cut(s)	20, 165, 559, 642, 797, 847, 1115, 1146, 1194
Bme18I	GGWCC	2 cut(s)	1034, 1447
BmeRI	GACNNNNNGTC	1 cut(s)	513
BmeT110I	CYCGRG	1 cut(s)	83
BmgT120I	GGNCC	2 cut(s)	1034, 1447
BmiI	GGNNCC	4 cut(s)	162, 169, 1449, 2050
BmrFI	CCNGG	9 cut(s)	20, 165, 559, 642, 797, 847, 1115, 1146, 1194
BmrI	ACTGGG	1 cut(s)	1969
BmsI	GCATC	4 cut(s)	493, 677, 1636, 1839
BmtI	GCTAGC	1 cut(s)	1884
BmuI	ACTGGG	1 cut(s)	1969
BoxI	GACNNNNGTC	1 cut(s)	1039
BpiI	GAAGAC	3 cut(s)	486, 659, 924
BplI	GAGNNNNNCTC	2 cut(s)	1887, 1919
BpmI	CTGGAG	1 cut(s)	186
Bpu10I	CCTNAGC	2 cut(s)	315, 1968
Bpu1102I	GCTNAGC	1 cut(s)	1876
Bpu14I	TTCGAA	1 cut(s)	249
BpuMI	CCSGG	2 cut(s)	559, 1194
BsaBI	GATNNNNATC	1 cut(s)	423
BsaI	GGTCTC	3 cut(s)	873, 1733, 1739
BsaJI	CCNNGG	4 cut(s)	84, 640, 1145, 2052
BsaWI	WCCGGW	2 cut(s)	950, 1123
BsaXI	ACNNNNNCTCC	2 cut(s)	159, 189
Bsc4I	CCNNNNNNNGG	4 cut(s)	557, 647, 1768, 1981
Bse118I	RCCGGY	1 cut(s)	1123
Bse1I	ACTGG	3 cut(s)	226, 967, 1975
Bse3DI	GCAATG	3 cut(s)	445, 905, 1299
Bse8I	GATNNNNATC	1 cut(s)	423
BseAI	TCCGGA	1 cut(s)	950
BseBI	CCWGG	7 cut(s)	20, 165, 642, 797, 847, 1115, 1146
BseDI	CCNNGG	4 cut(s)	84, 640, 1145, 2052
BseGI	GGATG	3 cut(s)	56, 487, 1675
BseJI	GATNNNNATC	1 cut(s)	423
BseLI	CCNNNNNNNGG	4 cut(s)	557, 647, 1768, 1981
BseMI	GCAATG	3 cut(s)	445, 905, 1299
BseNI	ACTGG	3 cut(s)	226, 967, 1975
BseSI	GKGCMC	1 cut(s)	1825
BseXI	GCAGC	5 cut(s)	325, 628, 787, 1291, 1505
BsgI	GTGCAG	2 cut(s)	635, 1635
BshFI	GGCC	1 cut(s)	265
BshNI	GGYRCC	1 cut(s)	160
BshTI	ACCGGT	1 cut(s)	1123
BsiHKAI	GWGCWC	2 cut(s)	571, 1825
BsiHKCI	CYCGRG	1 cut(s)	83
BsiSI	CCGG	5 cut(s)	197, 558, 951, 1124, 1193
BslFI	GGGAC	2 cut(s)	1108, 1356
BslI	CCNNNNNNNGG	4 cut(s)	557, 647, 1768, 1981
BsmAI	GTCTC	9 cut(s)	99, 212, 873, 1015, 1083, 1342, 1567, 1733, 1739
BsmFI	GGGAC	2 cut(s)	1108, 1356
BsmI	GAATGC	1 cut(s)	691
BsnI	GGCC	1 cut(s)	265
Bso31I	GGTCTC	3 cut(s)	873, 1733, 1739
BsoBI	CYCGRG	1 cut(s)	83
Bsp119I	TTCGAA	1 cut(s)	249
Bsp1286I	GDGCHC	3 cut(s)	571, 1825, 1974
Bsp13I	TCCGGA	1 cut(s)	950
Bsp143I	GATC	7 cut(s)	418, 424, 703, 1408, 1798, 1963, 1984
Bsp1720I	GCTNAGC	1 cut(s)	1876
Bsp19I	CCATGG	1 cut(s)	2052
BspACI	CCGC	7 cut(s)	593, 628, 1276, 1514, 1600, 1704, 1982
BspANI	GGCC	1 cut(s)	265
BspEI	TCCGGA	1 cut(s)	950
BspLI	GGNNCC	4 cut(s)	162, 169, 1449, 2050
BspMAI	CTGCAG	2 cut(s)	1290, 1495
BspMI	ACCTGC	1 cut(s)	1843
BspOI	GCTAGC	1 cut(s)	1884
BspPI	GGATC	3 cut(s)	1806, 1958, 1992
BspT104I	TTCGAA	1 cut(s)	249
BspT107I	GGYRCC	1 cut(s)	160
BspTNI	GGTCTC	3 cut(s)	873, 1733, 1739
BsrBI	CCGCTC	1 cut(s)	628
BsrDI	GCAATG	3 cut(s)	445, 905, 1299
BsrFI	RCCGGY	1 cut(s)	1123
BsrI	ACTGG	3 cut(s)	226, 967, 1975
BssAI	RCCGGY	1 cut(s)	1123
BssECI	CCNNGG	4 cut(s)	84, 640, 1145, 2052
BssMI	GATC	7 cut(s)	418, 424, 703, 1408, 1798, 1963, 1984
BssT1I	CCWWGG	1 cut(s)	2052
Bst2UI	CCWGG	7 cut(s)	20, 165, 642, 797, 847, 1115, 1146
Bst4CI	ACNGT	4 cut(s)	781, 1486, 1768, 1910
BstAPI	GCANNNNNTGC	3 cut(s)	1285, 1294, 1298
BstBI	TTCGAA	1 cut(s)	249
BstC8I	GCNNGC	9 cut(s)	27, 591, 630, 1111, 1290, 1299, 1727, 1873, 1882
BstDSI	CCRYGG	1 cut(s)	2052
BstF5I	GGATG	3 cut(s)	56, 487, 1675
BstKTI	GATC	7 cut(s)	421, 427, 706, 1411, 1801, 1966, 1987
BstMAI	GTCTC	9 cut(s)	99, 212, 873, 1015, 1083, 1342, 1567, 1733, 1739
BstMBI	GATC	7 cut(s)	418, 424, 703, 1408, 1798, 1963, 1984
BstMWI	GCNNNNNNNGC	9 cut(s)	167, 625, 1115, 1285, 1294, 1298, 1613, 1877, 1881
BstNI	CCWGG	7 cut(s)	20, 165, 642, 797, 847, 1115, 1146
BstNSI	RCATGY	3 cut(s)	593, 1113, 1729
BstPAI	GACNNNNGTC	1 cut(s)	1039
BstSCI	CCNGG	9 cut(s)	18, 163, 557, 640, 795, 845, 1113, 1144, 1192
BstSFI	CTRYAG	5 cut(s)	680, 1286, 1491, 1531, 1755
BstSLI	GKGCMC	1 cut(s)	1825
BstV1I	GCAGC	5 cut(s)	325, 628, 787, 1291, 1505
BstV2I	GAAGAC	3 cut(s)	486, 659, 924
BstX2I	RGATCY	2 cut(s)	1798, 1963
BstYI	RGATCY	2 cut(s)	1798, 1963
BsuRI	GGCC	1 cut(s)	265
BtgI	CCRYGG	1 cut(s)	2052
BtgZI	GCGATG	1 cut(s)	1772
BtsCI	GGATG	3 cut(s)	56, 487, 1675
BtsI	GCAGTG	1 cut(s)	1623
BtsIMutI	CAGTG	3 cut(s)	569, 777, 1623
BveI	ACCTGC	1 cut(s)	1843
Cac8I	GCNNGC	9 cut(s)	27, 591, 630, 1111, 1290, 1299, 1727, 1873, 1882
CaiI	CAGNNNCTG	3 cut(s)	1285, 1490, 1967
Cfr10I	RCCGGY	1 cut(s)	1123
Cfr13I	GGNCC	2 cut(s)	1034, 1447
Csp6I	GTAC	1 cut(s)	1717
CspAI	ACCGGT	1 cut(s)	1123
CviQI	GTAC	1 cut(s)	1717
DpnI	GATC	7 cut(s)	420, 426, 705, 1410, 1800, 1965, 1986
DpnII	GATC	7 cut(s)	418, 424, 703, 1408, 1798, 1963, 1984
DriI	GACNNNNNGTC	1 cut(s)	513
Eam1105I	GACNNNNNGTC	1 cut(s)	513
Eco130I	CCWWGG	1 cut(s)	2052
Eco24I	GRGCYC	1 cut(s)	1974
Eco31I	GGTCTC	3 cut(s)	873, 1733, 1739
Eco47I	GGWCC	2 cut(s)	1034, 1447
Eco57I	CTGAAG	2 cut(s)	525, 987
Eco88I	CYCGRG	1 cut(s)	83
EcoO109I	RGGNCCY	1 cut(s)	1034
EcoRII	CCWGG	7 cut(s)	18, 163, 640, 795, 845, 1113, 1144
EcoT14I	CCWWGG	1 cut(s)	2052
EcoT22I	ATGCAT	2 cut(s)	311, 1111
EcoT38I	GRGCYC	1 cut(s)	1974
ErhI	CCWWGG	1 cut(s)	2052
FalI	AAGNNNNNCTT	4 cut(s)	453, 485, 931, 963
FaqI	GGGAC	2 cut(s)	1108, 1356
FauI	CCCGC	1 cut(s)	621
FbaI	TGATCA	2 cut(s)	424, 703
FblI	GTMKAC	2 cut(s)	146, 679
Fnu4HI	GCNGC	6 cut(s)	339, 617, 801, 1277, 1280, 1494
FokI	GGATG	3 cut(s)	63, 494, 1682
FriOI	GRGCYC	1 cut(s)	1974
Fsp4HI	GCNGC	6 cut(s)	339, 617, 801, 1277, 1280, 1494
FspBI	CTAG	6 cut(s)	237, 243, 282, 1203, 1644, 1881
GluI	GCNGC	6 cut(s)	339, 617, 801, 1277, 1280, 1494
GsuI	CTGGAG	1 cut(s)	186
HaeIII	GGCC	1 cut(s)	265
HapII	CCGG	5 cut(s)	197, 558, 951, 1124, 1193
HincII	GTYRAC	2 cut(s)	385, 822
HindII	GTYRAC	2 cut(s)	385, 822
HinfI	GANTC	9 cut(s)	128, 246, 257, 545, 1040, 1096, 1475, 1829, 1943
HpaII	CCGG	5 cut(s)	197, 558, 951, 1124, 1193
HphI	GGTGA	4 cut(s)	236, 540, 1449, 1824
Hpy166II	GTNNAC	6 cut(s)	147, 385, 680, 822, 1719, 1823
Hpy188I	TCNGA	9 cut(s)	133, 544, 586, 763, 1083, 1183, 1399, 1989, 2014
Hpy8I	GTNNAC	6 cut(s)	147, 385, 680, 822, 1719, 1823
HpyAV	CCTTC	7 cut(s)	106, 151, 221, 890, 957, 1266, 1449
HpyCH4III	ACNGT	4 cut(s)	781, 1486, 1768, 1910
HpyCH4IV	ACGT	1 cut(s)	118
HpyF10VI	GCNNNNNNNGC	9 cut(s)	167, 625, 1115, 1285, 1294, 1298, 1613, 1877, 1881
HpySE526I	ACGT	1 cut(s)	118
Kpn2I	TCCGGA	1 cut(s)	950
Ksp22I	TGATCA	2 cut(s)	424, 703
Kzo9I	GATC	7 cut(s)	418, 424, 703, 1408, 1798, 1963, 1984
LmnI	GCTCC	4 cut(s)	22, 167, 566, 748
Lsp1109I	GCAGC	5 cut(s)	325, 628, 787, 1291, 1505
LweI	GCATC	4 cut(s)	493, 677, 1636, 1839
MaeI	CTAG	6 cut(s)	237, 243, 282, 1203, 1644, 1881
MaeII	ACGT	1 cut(s)	118
MaeIII	GTNAC	5 cut(s)	119, 535, 781, 1013, 1709
MalI	GATC	7 cut(s)	420, 426, 705, 1410, 1800, 1965, 1986
MbiI	CCGCTC	1 cut(s)	628
MboI	GATC	7 cut(s)	418, 424, 703, 1408, 1798, 1963, 1984
MboII	GAAGA	8 cut(s)	486, 664, 804, 807, 924, 984, 1433, 1927
MflI	RGATCY	2 cut(s)	1798, 1963
MhlI	GDGCHC	3 cut(s)	571, 1825, 1974
MlyI	GAGTC	4 cut(s)	251, 539, 1049, 1090
MmeI	TCCRAC	6 cut(s)	234, 741, 861, 1539, 1677, 1776
MnlI	CCTC	9 cut(s)	40, 79, 310, 567, 858, 877, 1510, 1687, 2050
Mph1103I	ATGCAT	2 cut(s)	311, 1111
MroI	TCCGGA	1 cut(s)	950
MroXI	GAANNNNTTC	3 cut(s)	348, 946, 1813
MseI	TTAA	4 cut(s)	600, 1155, 1268, 1427
MslI	CAYNNNNRTG	4 cut(s)	1366, 1635, 1724, 1818
MspA1I	CMGCKG	1 cut(s)	1514
MspI	CCGG	5 cut(s)	197, 558, 951, 1124, 1193
MspR9I	CCNGG	9 cut(s)	20, 165, 559, 642, 797, 847, 1115, 1146, 1194
Mva1269I	GAATGC	1 cut(s)	691
MvaI	CCWGG	7 cut(s)	20, 165, 642, 797, 847, 1115, 1146
MwoI	GCNNNNNNNGC	9 cut(s)	167, 625, 1115, 1285, 1294, 1298, 1613, 1877, 1881
NciI	CCSGG	2 cut(s)	559, 1194
NcoI	CCATGG	1 cut(s)	2052
NdeII	GATC	7 cut(s)	418, 424, 703, 1408, 1798, 1963, 1984
NheI	GCTAGC	1 cut(s)	1880
NlaIV	GGNNCC	4 cut(s)	162, 169, 1449, 2050
NmuCI	GTSAC	2 cut(s)	535, 1013
NsiI	ATGCAT	2 cut(s)	311, 1111
NspI	RCATGY	3 cut(s)	593, 1113, 1729
NspV	TTCGAA	1 cut(s)	249
OliI	CACNNNNGTG	1 cut(s)	1366
PaeI	GCATGC	3 cut(s)	593, 1113, 1729
PaqCI	CACCTGC	1 cut(s)	1843
PctI	GAATGC	1 cut(s)	691
PdmI	GAANNNNTTC	3 cut(s)	348, 946, 1813
PfeI	GAWTC	5 cut(s)	128, 246, 1475, 1829, 1943
PflFI	GACNNNGTC	1 cut(s)	757
PinAI	ACCGGT	1 cut(s)	1123
PkrI	GCNGC	6 cut(s)	340, 618, 802, 1278, 1281, 1495
PleI	GAGTC	4 cut(s)	251, 539, 1048, 1090
PpsI	GAGTC	4 cut(s)	251, 539, 1048, 1090
PpuMI	RGGWCCY	1 cut(s)	1034
PshAI	GACNNNNGTC	1 cut(s)	1039
Psp5II	RGGWCCY	1 cut(s)	1034
Psp6I	CCWGG	7 cut(s)	18, 163, 640, 795, 845, 1113, 1144
PspGI	CCWGG	7 cut(s)	18, 163, 640, 795, 845, 1113, 1144
PspN4I	GGNNCC	4 cut(s)	162, 169, 1449, 2050
PspPI	GGNCC	2 cut(s)	1034, 1447
PspPPI	RGGWCCY	1 cut(s)	1034
PstI	CTGCAG	2 cut(s)	1290, 1495
PstNI	CAGNNNCTG	3 cut(s)	1285, 1490, 1967
PsuI	RGATCY	2 cut(s)	1798, 1963
PsyI	GACNNNGTC	1 cut(s)	757
RsaI	GTAC	1 cut(s)	1718
RsaNI	GTAC	1 cut(s)	1717
RseI	CAYNNNNRTG	4 cut(s)	1366, 1635, 1724, 1818
SaqAI	TTAA	4 cut(s)	600, 1155, 1268, 1427
SatI	GCNGC	6 cut(s)	339, 617, 801, 1277, 1280, 1494
Sau3AI	GATC	7 cut(s)	418, 424, 703, 1408, 1798, 1963, 1984
Sau96I	GGNCC	2 cut(s)	1034, 1447
SchI	GAGTC	4 cut(s)	251, 539, 1049, 1090
ScrFI	CCNGG	9 cut(s)	20, 165, 559, 642, 797, 847, 1115, 1146, 1194
SduI	GDGCHC	3 cut(s)	571, 1825, 1974
SfaNI	GCATC	4 cut(s)	493, 677, 1636, 1839
SfcI	CTRYAG	5 cut(s)	680, 1286, 1491, 1531, 1755
SfuI	TTCGAA	1 cut(s)	249
SgrAI	CRCCGGYG	1 cut(s)	1123
SinI	GGWCC	2 cut(s)	1034, 1447
SmiMI	CAYNNNNRTG	4 cut(s)	1366, 1635, 1724, 1818
SphI	GCATGC	3 cut(s)	593, 1113, 1729
SsiI	CCGC	7 cut(s)	593, 628, 1276, 1514, 1600, 1704, 1982
SspI	AATATT	1 cut(s)	1505
SspMI	CTAG	6 cut(s)	237, 243, 282, 1203, 1644, 1881
StyD4I	CCNGG	9 cut(s)	18, 163, 557, 640, 795, 845, 1113, 1144, 1192
StyI	CCWWGG	1 cut(s)	2052
TaaI	ACNGT	4 cut(s)	781, 1486, 1768, 1910
TaiI	ACGT	1 cut(s)	121
TaqI	TCGA	5 cut(s)	216, 249, 1905, 2024, 2061
TaqII	GACCGA	2 cut(s)	1757, 1776
TauI	GCSGC	1 cut(s)	1279
TfiI	GAWTC	5 cut(s)	128, 246, 1475, 1829, 1943
Tru1I	TTAA	4 cut(s)	600, 1155, 1268, 1427
Tru9I	TTAA	4 cut(s)	600, 1155, 1268, 1427
TscAI	CASTG	3 cut(s)	576, 784, 1623
TseFI	GTSAC	2 cut(s)	535, 1013
TseI	GCWGC	5 cut(s)	338, 616, 800, 1279, 1493
Tsp45I	GTSAC	2 cut(s)	535, 1013
TspDTI	ATGAA	4 cut(s)	378, 909, 1775, 2018
TspGWI	ACGGA	1 cut(s)	1908
TspRI	CASTG	3 cut(s)	576, 784, 1623
Tth111I	GACNNNGTC	1 cut(s)	757
VneI	GTGCAC	1 cut(s)	1821
VpaK11BI	GGWCC	2 cut(s)	1034, 1447
XbaI	TCTAGA	1 cut(s)	242
XceI	RCATGY	3 cut(s)	593, 1113, 1729
XcmI	CCANNNNNNNNNTGG	1 cut(s)	467
XmiI	GTMKAC	2 cut(s)	146, 679
XmnI	GAANNNNTTC	3 cut(s)	348, 946, 1813
XspI	CTAG	6 cut(s)	237, 243, 282, 1203, 1644, 1881
Zsp2I	ATGCAT	2 cut(s)	311, 1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.